Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:55:17 (10509): wrapper (7.7.26015): starting
19:55:17 (10509): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 19:55:17] Arguments: --nthreads 12
[2025-06-04 19:55:17] Threads: 12
[2025-06-04 19:55:17] Checking for CVMFS
[2025-06-04 19:55:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:55:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:55:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:55:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:55:17] 2.11.2.0 28623 28993 85208 146798 3 1 19043663 20275201 1 130560 0 14571170 99.983 5482896 6785 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 19:55:17] CVMFS is ok
[2025-06-04 19:55:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:55:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:55:17] Further information can be found at the LHC@home message board.
[2025-06-04 19:55:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:55:17] Checking for apptainer binary...
[2025-06-04 19:55:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:55:17] Running /usr/bin/apptainer --version
[2025-06-04 19:55:17] apptainer version 1.3.2-1.el7
[2025-06-04 19:55:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:55:19] c-205-20.aglt2.org
[2025-06-04 19:55:19] apptainer works
[2025-06-04 19:55:19] Set ATHENA_PROC_NUMBER=12
[2025-06-04 19:55:19] Set ATHENA_CORE_NUMBER=12
[2025-06-04 19:55:19] Starting ATLAS job with PandaID=6667101372
[2025-06-04 19:55:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:26:38]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:26:38]  guid=aa6137c2-3754-4f91-b2b9-dc0a2d82a914
[2025-06-04 21:26:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 21:26:38]  is_altstaged=None
[2025-06-04 21:26:38]  is_tar=False
[2025-06-04 21:26:38]  lfn=log.44871837._068332.job.log.tgz.1
[2025-06-04 21:26:38]  mtime=0
[2025-06-04 21:26:38]  protocol_id=None
[2025-06-04 21:26:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 21:26:38]  replicas=None
[2025-06-04 21:26:38]  scope=mc23_13p6TeV
[2025-06-04 21:26:38]  status=None
[2025-06-04 21:26:38]  status_code=0
[2025-06-04 21:26:38]  storage_token=
[2025-06-04 21:26:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667101372/log.44871837._068332.job.log.tgz.1
[2025-06-04 21:26:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/47/log.44871837._068332.job.log.tgz.1
[2025-06-04 21:26:38]  workdir=None
[2025-06-04 21:26:38] ]
[2025-06-04 21:26:38] 2025-06-05 01:26:16,177 | INFO     | transferring file log.44871837._068332.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667101372/log.44871837._068332.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 21:26:38] 2025-06-05 01:26:16,177 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667101372/log.44871837._068332.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._068332.job
[2025-06-04 21:26:38] 2025-06-05 01:26:16,198 | INFO     | adding to output.list: log.44871837._068332.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/47/log.44871837._068332.job.log.tg
[2025-06-04 21:26:38] 2025-06-05 01:26:16,199 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 21:26:38] 2025-06-05 01:26:16,199 | INFO     | summary of transferred files:
[2025-06-04 21:26:38] 2025-06-05 01:26:16,200 | INFO     |  -- lfn=log.44871837._068332.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 21:26:38] 2025-06-05 01:26:16,200 | INFO     | stage-out finished correctly
[2025-06-04 21:26:38] 2025-06-05 01:26:18,372 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 21:26:38] 2025-06-05 01:26:18,454 | INFO     | job 6667101372 has state=finished
[2025-06-04 21:26:38] 2025-06-05 01:26:18,454 | INFO     | preparing for final server update for job 6667101372 in state='finished'
[2025-06-04 21:26:38] 2025-06-05 01:26:18,455 | INFO     | this job has now completed (state=finished)
[2025-06-04 21:26:38] 2025-06-05 01:26:18,455 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 21:26:38] 2025-06-05 01:26:18,455 | INFO     | log transfer has been attempted: DONE
[2025-06-04 21:26:38] 2025-06-05 01:26:18,455 | INFO     | job 6667101372 has finished - writing final server update
[2025-06-04 21:26:38] 2025-06-05 01:26:18,456 | INFO     | total number of processed events: 400 (read)
[2025-06-04 21:26:38] 2025-06-05 01:26:18,457 | INFO     | executing command: lscpu
[2025-06-04 21:26:38] 2025-06-05 01:26:18,483 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 21:26:38] 2025-06-05 01:26:19,797 | WARNING  | process 21202 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 21:26:38] 2025-06-05 01:26:19,797 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667101372/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:26:38] 2025-06-05 01:26:19,887 | INFO     | number of running child processes to parent process 21202: 1
[2025-06-04 21:26:38] 2025-06-05 01:26:19,888 | INFO     | maximum number of monitored processes: 6
[2025-06-04 21:26:38] 2025-06-05 01:26:22,390 | INFO     | monitor loop #407: job 0:6667101372 is in state 'finished'
[2025-06-04 21:26:38] 2025-06-05 01:26:22,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:26:38] 2025-06-05 01:26:24,198 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 21:26:38] 2025-06-05 01:26:24,198 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667101372/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:26:38] 2025-06-05 01:26:24,199 | INFO     | extracted standard info from prmon json
[2025-06-04 21:26:38] 2025-06-05 01:26:24,199 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:26:38] 2025-06-05 01:26:24,199 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:26:38] 2025-06-05 01:26:24,200 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:26:38] 2025-06-05 01:26:24,200 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:26:38] 2025-06-05 01:26:24,203 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:26:38] 2025-06-05 01:26:24,203 | INFO     | sum of square deviations: 170944600.5
[2025-06-04 21:26:38] 2025-06-05 01:26:24,204 | INFO     | sum of deviations: -6158015941.000001
[2025-06-04 21:26:38] 2025-06-05 01:26:24,204 | INFO     | mean x: 1749084138.5
[2025-06-04 21:26:38] 2025-06-05 01:26:24,204 | INFO     | mean y: 2718993.7560975607
[2025-06-04 21:26:38] 2025-06-05 01:26:24,204 | INFO     | -- intersect: 63010781111.71257
[2025-06-04 21:26:38] 2025-06-05 01:26:24,204 | INFO     | intersect: 63010781111.71257
[2025-06-04 21:26:38] 2025-06-05 01:26:24,205 | INFO     | chi2: 0.0642036760661269
[2025-06-04 21:26:38] 2025-06-05 01:26:24,205 | INFO     | -- intersect: 63010781111.71257
[2025-06-04 21:26:38] 2025-06-05 01:26:24,205 | INFO     | current memory leak: -36.02 B/s (using 82 data points, chi2=0.06)
[2025-06-04 21:26:38] 2025-06-05 01:26:24,206 | INFO     | ..............................
[2025-06-04 21:26:38] 2025-06-05 01:26:24,206 | INFO     | . Timing measurements:
[2025-06-04 21:26:38] 2025-06-05 01:26:24,206 | INFO     | . get job = 0 s
[2025-06-04 21:26:38] 2025-06-05 01:26:24,206 | INFO     | . initial setup = 2 s
[2025-06-04 21:26:38] 2025-06-05 01:26:24,206 | INFO     | . payload setup = 9 s
[2025-06-04 21:26:38] 2025-06-05 01:26:24,206 | INFO     | . stage-in = 0 s
[2025-06-04 21:26:38] 2025-06-05 01:26:24,207 | INFO     | . payload execution = 5413 s
[2025-06-04 21:26:38] 2025-06-05 01:26:24,207 | INFO     | . stage-out = 0 s
[2025-06-04 21:26:38] 2025-06-05 01:26:24,207 | INFO     | . log creation = 0 s
[2025-06-04 21:26:38] 2025-06-05 01:26:24,207 | INFO     | ..............................
[2025-06-04 21:26:38] 2025-06-05 01:26:24,554 | INFO     | 
[2025-06-04 21:26:38] 2025-06-05 01:26:24,555 | INFO     | job summary report
[2025-06-04 21:26:38] 2025-06-05 01:26:24,555 | INFO     | --------------------------------------------------
[2025-06-04 21:26:38] 2025-06-05 01:26:24,555 | INFO     | PanDA job id: 6667101372
[2025-06-04 21:26:38] 2025-06-05 01:26:24,555 | INFO     | task id: 44871837
[2025-06-04 21:26:38] 2025-06-05 01:26:24,555 | INFO     | errors: (none)
[2025-06-04 21:26:38] 2025-06-05 01:26:24,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:26:38] 2025-06-05 01:26:24,556 | INFO     | pilot state: finished 
[2025-06-04 21:26:38] 2025-06-05 01:26:24,556 | INFO     | transexitcode: 0
[2025-06-04 21:26:38] 2025-06-05 01:26:24,556 | INFO     | exeerrorcode: 0
[2025-06-04 21:26:38] 2025-06-05 01:26:24,556 | INFO     | exeerrordiag: 
[2025-06-04 21:26:38] 2025-06-05 01:26:24,556 | INFO     | exitcode: 0
[2025-06-04 21:26:38] 2025-06-05 01:26:24,556 | INFO     | exitmsg: OK
[2025-06-04 21:26:38] 2025-06-05 01:26:24,557 | INFO     | cpuconsumptiontime: 59920 s
[2025-06-04 21:26:38] 2025-06-05 01:26:24,557 | INFO     | nevents: 400
[2025-06-04 21:26:38] 2025-06-05 01:26:24,557 | INFO     | neventsw: 0
[2025-06-04 21:26:38] 2025-06-05 01:26:24,557 | INFO     | pid: 21202
[2025-06-04 21:26:38] 2025-06-05 01:26:24,557 | INFO     | pgrp: 21202
[2025-06-04 21:26:38] 2025-06-05 01:26:24,557 | INFO     | corecount: 12
[2025-06-04 21:26:38] 2025-06-05 01:26:24,557 | INFO     | event service: False
[2025-06-04 21:26:38] 2025-06-05 01:26:24,558 | INFO     | sizes: {0: 2397392, 5: 2397598, 11: 2397654, 5427: 2424042, 5428: 2432983, 5431: 2433039, 5436: 2433337}
[2025-06-04 21:26:38] 2025-06-05 01:26:24,558 | INFO     | --------------------------------------------------
[2025-06-04 21:26:38] 2025-06-05 01:26:24,558 | INFO     | 
[2025-06-04 21:26:38] 2025-06-05 01:26:24,558 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 21:26:38] 2025-06-05 01:26:24,579 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,579 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,579 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,579 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,579 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,580 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,580 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,580 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,580 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,580 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,580 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,581 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,581 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,581 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,581 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,581 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,581 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,582 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:26:38] 2025-06-05 01:26:24,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,582 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:26:38] 2025-06-05 01:26:24,582 | INFO     | job 6667101372 has completed (purged errors)
[2025-06-04 21:26:38] 2025-06-05 01:26:24,582 | INFO     | overall cleanup function is called
[2025-06-04 21:26:38] 2025-06-05 01:26:25,591 | INFO     | --- collectZombieJob: --- 10, [21202]
[2025-06-04 21:26:38] 2025-06-05 01:26:25,591 | INFO     | zombie collector waiting for pid 21202
[2025-06-04 21:26:38] 2025-06-05 01:26:25,591 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:26:38] 2025-06-05 01:26:25,591 | INFO     | collected zombie processes
[2025-06-04 21:26:38] 2025-06-05 01:26:25,591 | INFO     | will attempt to kill all subprocesses of pid=21202
[2025-06-04 21:26:38] 2025-06-05 01:26:25,681 | INFO     | process IDs to be killed: [21202] (in reverse order)
[2025-06-04 21:26:38] 2025-06-05 01:26:25,730 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:26:38] 2025-06-05 01:26:25,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:26:38] 2025-06-05 01:26:25,734 | INFO     | did not find any defunct processes belonging to 21202
[2025-06-04 21:26:38] 2025-06-05 01:26:25,737 | INFO     | did not find any defunct processes belonging to 21202
[2025-06-04 21:26:38] 2025-06-05 01:26:25,737 | INFO     | ready for new job
[2025-06-04 21:26:38] 2025-06-05 01:26:25,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:26:38] 2025-06-05 01:26:25,746 | INFO     | **************************************
[2025-06-04 21:26:38] 2025-06-05 01:26:25,746 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:26:38] 2025-06-05 01:26:25,746 | INFO     | **************************************
[2025-06-04 21:26:38] 2025-06-05 01:26:25,746 | INFO     | 
[2025-06-04 21:26:38] 2025-06-05 01:26:25,747 | INFO     | architecture information:
[2025-06-04 21:26:38] 2025-06-05 01:26:25,747 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:26:38] 2025-06-05 01:26:25,763 | INFO     | cat /etc/os-release:
[2025-06-04 21:26:38] NAME="CentOS Linux"
[2025-06-04 21:26:38] VERSION="7 (Core)"
[2025-06-04 21:26:38] ID="centos"
[2025-06-04 21:26:38] ID_LIKE="rhel fedora"
[2025-06-04 21:26:38] VERSION_ID="7"
[2025-06-04 21:26:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:26:38] ANSI_COLOR="0;31"
[2025-06-04 21:26:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:26:38] HOME_URL="https://www.centos.org/"
[2025-06-04 21:26:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:26:38] 
[2025-06-04 21:26:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:26:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:26:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:26:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:26:38] 
[2025-06-04 21:26:38] 2025-06-05 01:26:25,764 | INFO     | **************************************
[2025-06-04 21:26:38] 2025-06-05 01:26:26,266 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 21:26:38] 2025-06-05 01:26:26,285 | INFO     | sufficient remaining disk space (29383196672 B)
[2025-06-04 21:26:38] 2025-06-05 01:26:26,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:26:38] 2025-06-05 01:26:26,286 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:26:38] 2025-06-05 01:26:26,286 | INFO     | update_server=False
[2025-06-04 21:26:38] 2025-06-05 01:26:26,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:26:38] 2025-06-05 01:26:26,286 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:26:38] 2025-06-05 01:26:26,287 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:26:38] 2025-06-05 01:26:26,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:26:38] 2025-06-05 01:26:26,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:26:38] 2025-06-05 01:26:26,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:26:38] 2025-06-05 01:26:26,288 | INFO     | aborting loop
[2025-06-04 21:26:38] 2025-06-05 01:26:26,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:26:38] 2025-06-05 01:26:26,512 | INFO     | all data control threads have been joined
[2025-06-04 21:26:38] 2025-06-05 01:26:26,798 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:26:38] 2025-06-05 01:26:27,080 | INFO     | all payload control threads have been joined
[2025-06-04 21:26:38] 2025-06-05 01:26:27,288 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:27,294 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:27,294 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:27,294 | INFO     | all job control threads have been joined
[2025-06-04 21:26:38] 2025-06-05 01:26:27,363 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:27,464 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:27,503 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:27,518 | INFO     | [data] control thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:28,085 | INFO     | [payload] control thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:28,293 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:28,300 | INFO     | [job] control thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:28,315 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:28,558 | INFO     | [job] validate thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:28,594 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:28,803 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:28,809 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:28,962 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:26:38] 2025-06-05 01:26:32,966 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:26:38] 2025-06-05 01:26:33,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140360671573824)>', '<ExcThread(monitor, started 140360361682688)>']
[2025-06-04 21:26:38] 2025-06-05 01:26:34,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:26:38] 2025-06-05 01:26:34,324 | INFO     | [monitor] control thread has ended
[2025-06-04 21:26:38] 2025-06-05 01:26:38,380 | INFO     | all workflow threads have been joined
[2025-06-04 21:26:38] 2025-06-05 01:26:38,381 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:26:38] 2025-06-05 01:26:38,381 | INFO     | traces error code: 0
[2025-06-04 21:26:38] 2025-06-05 01:26:38,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:26:38] 2025-06-05 01:26:38,469 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:26:38] 2025-06-05 01:26:38,472 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:26:38] 2025-06-05 01:26:38,476 [wrapper] pilotpid: 14109
[2025-06-04 21:26:38] 2025-06-05 01:26:38,481 [wrapper] Pilot exit status: 0
[2025-06-04 21:26:38] 2025-06-05 01:26:38,495 [wrapper] pandaids: 6667101372
[2025-06-04 21:26:38] 2025-06-05 01:26:38,538 [wrapper] cleanup supervisor_pilot 10693 14110
[2025-06-04 21:26:38] 2025-06-05 01:26:38,541 [wrapper] Test setup, not cleaning
[2025-06-04 21:26:38] 2025-06-05 01:26:38,545 [wrapper] apfmon messages muted
[2025-06-04 21:26:38] 2025-06-05 01:26:38,549 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:26:38] 2025-06-05 01:26:38,553 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:26:38]  *** Error codes and diagnostics ***
[2025-06-04 21:26:38]     "exeErrorCode": 0,
[2025-06-04 21:26:38]     "exeErrorDiag": "",
[2025-06-04 21:26:38]     "pilotErrorCode": 0,
[2025-06-04 21:26:38]     "pilotErrorDiag": "",
[2025-06-04 21:26:38]  *** Listing of results directory ***
[2025-06-04 21:26:38] total 414088
[2025-06-04 21:26:38] -rw-r--r-- 1 boincer umatlas    495897 May 27 09:43 pilot3.tar.gz
[2025-06-04 21:26:38] -rw-r--r-- 1 boincer umatlas      5111 May 27 09:50 queuedata.json
[2025-06-04 21:26:38] -rwx------ 1 boincer umatlas     37140 May 27 09:53 runpilot2-wrapper.sh
[2025-06-04 21:26:38] -rw-r--r-- 1 boincer umatlas       100 Jun  4 19:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:26:38] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 19:55 run_atlas
[2025-06-04 21:26:38] -rw-r--r-- 1 boincer umatlas       105 Jun  4 19:55 job.xml
[2025-06-04 21:26:38] -rw-r--r-- 2 boincer umatlas 224826210 Jun  4 19:55 EVNT.44871834._002687.pool.root.1
[2025-06-04 21:26:38] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:55 start_atlas.sh
[2025-06-04 21:26:38] drwxrwx--x 2 boincer umatlas      4096 Jun  4 19:55 shared
[2025-06-04 21:26:38] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 19:55 input.tar.gz
[2025-06-04 21:26:38] -rw-r--r-- 1 boincer umatlas         0 Jun  4 19:55 boinc_lockfile
[2025-06-04 21:26:38] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 19:55 pandaJob.out
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas    987117 Jun  4 19:55 agis_schedconf.cvmfs.json
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas   1598969 Jun  4 19:55 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:26:38] drwx------ 4 boincer umatlas      4096 Jun  4 19:55 pilot3
[2025-06-04 21:26:38] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 21:19 init_data.xml
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas        95 Jun  4 21:25 pilot_heartbeat.json
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas 193603982 Jun  4 21:25 HITS.44871837._068332.pool.root.1
[2025-06-04 21:26:38] -rw-r--r-- 1 boincer umatlas       529 Jun  4 21:25 boinc_task_state.xml
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas      1047 Jun  4 21:26 memory_monitor_summary.json
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas    374754 Jun  4 21:26 log.44871837._068332.job.log.tgz.1
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas      7748 Jun  4 21:26 heartbeat.json
[2025-06-04 21:26:38] -rw-r--r-- 1 boincer umatlas        27 Jun  4 21:26 wrapper_checkpoint.txt
[2025-06-04 21:26:38] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 21:26 boinc_mmap_file
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas      4476 Jun  4 21:26 pilotlog.txt
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas    510952 Jun  4 21:26 log.44871837._068332.job.log.1
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas       357 Jun  4 21:26 output.list
[2025-06-04 21:26:38] -rw-r--r-- 1 boincer umatlas       620 Jun  4 21:26 runtime_log
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas    901120 Jun  4 21:26 result.tar.gz
[2025-06-04 21:26:38] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 21:26 runtime_log.err
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas       659 Jun  4 21:26 q30MDmHv9d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmOtRKDmqux9wn.diag
[2025-06-04 21:26:38] -rw-r--r-- 1 boincer umatlas     21305 Jun  4 21:26 stderr.txt
[2025-06-04 21:26:38] HITS file was successfully produced:
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas 193603982 Jun  4 21:25 shared/HITS.pool.root.1
[2025-06-04 21:26:38]  *** Contents of shared directory: ***
[2025-06-04 21:26:38] total 410028
[2025-06-04 21:26:38] -rw-r--r-- 2 boincer umatlas 224826210 Jun  4 19:55 ATLAS.root_0
[2025-06-04 21:26:38] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:55 start_atlas.sh
[2025-06-04 21:26:38] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 19:55 input.tar.gz
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas 193603982 Jun  4 21:25 HITS.pool.root.1
[2025-06-04 21:26:38] -rw------- 1 boincer umatlas    901120 Jun  4 21:26 result.tar.gz
21:26:40 (10509): run_atlas exited; CPU time 59888.685697
21:26:40 (10509): called boinc_finish(0)

</stderr_txt>
]]>

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