Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:54:32 (2868466): wrapper (7.7.26015): starting
19:54:32 (2868466): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 19:54:32] Arguments: --nthreads 8
[2025-06-04 19:54:32] Threads: 8
[2025-06-04 19:54:32] Checking for CVMFS
[2025-06-04 19:54:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:54:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:54:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:54:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:54:33] 2.12.6.0 199032 145908 938440 146798 0 500 26001560 32935937 34905 130560 0 704366077 99.687 567459910 20778 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 19:54:33] CVMFS is ok
[2025-06-04 19:54:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:54:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:54:33] Further information can be found at the LHC@home message board.
[2025-06-04 19:54:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:54:33] Checking for apptainer binary...
[2025-06-04 19:54:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:54:33] Running /usr/bin/apptainer --version
[2025-06-04 19:54:33] apptainer version 1.4.1-1.el9
[2025-06-04 19:54:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:54:33] lc-10-9.aglt2.org
[2025-06-04 19:54:33] apptainer works
[2025-06-04 19:54:33] Set ATHENA_PROC_NUMBER=8
[2025-06-04 19:54:33] Set ATHENA_CORE_NUMBER=8
[2025-06-04 19:54:33] Starting ATLAS job with PandaID=6668327180
[2025-06-04 19:54:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:55:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:55:28] 2025-06-05 01:55:12,153 | INFO     | total number of processed events: 400 (read)
[2025-06-04 21:55:28] 2025-06-05 01:55:12,170 | INFO     | executing command: lscpu
[2025-06-04 21:55:28] 2025-06-05 01:55:12,246 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 21:55:28] 2025-06-05 01:55:12,948 | INFO     | monitor loop #500: job 0:6668327180 is in state 'finished'
[2025-06-04 21:55:28] 2025-06-05 01:55:12,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:55:28] 2025-06-05 01:55:15,451 | INFO     | monitor loop #501: job 0:6668327180 is in state 'finished'
[2025-06-04 21:55:28] 2025-06-05 01:55:15,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:55:28] 2025-06-05 01:55:16,567 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 21:55:28] 2025-06-05 01:55:16,567 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6668327180/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:55:28] 2025-06-05 01:55:16,568 | INFO     | extracted standard info from prmon json
[2025-06-04 21:55:28] 2025-06-05 01:55:16,568 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:55:28] 2025-06-05 01:55:16,568 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:55:28] 2025-06-05 01:55:16,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:55:28] 2025-06-05 01:55:16,569 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:55:28] 2025-06-05 01:55:16,572 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:55:28] 2025-06-05 01:55:16,572 | INFO     | sum of square deviations: 509440249.5
[2025-06-04 21:55:28] 2025-06-05 01:55:16,573 | INFO     | sum of deviations: 19083797265.5
[2025-06-04 21:55:28] 2025-06-05 01:55:16,573 | INFO     | mean x: 1749084883.5
[2025-06-04 21:55:28] 2025-06-05 01:55:16,573 | INFO     | mean y: 2118048.36440678
[2025-06-04 21:55:28] 2025-06-05 01:55:16,573 | INFO     | -- intersect: -65519169972.41001
[2025-06-04 21:55:28] 2025-06-05 01:55:16,573 | INFO     | intersect: -65519169972.41001
[2025-06-04 21:55:28] 2025-06-05 01:55:16,574 | INFO     | chi2: 1.6507052759607512
[2025-06-04 21:55:28] 2025-06-05 01:55:16,574 | INFO     | sum of square deviations: 447383272.0
[2025-06-04 21:55:28] 2025-06-05 01:55:16,575 | INFO     | sum of deviations: 18213590389.0
[2025-06-04 21:55:28] 2025-06-05 01:55:16,575 | INFO     | mean x: 1749084731.0
[2025-06-04 21:55:28] 2025-06-05 01:55:16,575 | INFO     | mean y: 2115857.318584071
[2025-06-04 21:55:28] 2025-06-05 01:55:16,575 | INFO     | -- intersect: -71205537266.75319
[2025-06-04 21:55:28] 2025-06-05 01:55:16,575 | INFO     | intersect: -71205537266.75319
[2025-06-04 21:55:28] 2025-06-05 01:55:16,575 | INFO     | chi2: 1.6481908927281639
[2025-06-04 21:55:28] 2025-06-05 01:55:16,575 | INFO     | current chi2=1.6481908927281639 (change=0.15232175417407046 %)
[2025-06-04 21:55:28] 2025-06-05 01:55:16,575 | INFO     | right removable region: 112
[2025-06-04 21:55:28] 2025-06-05 01:55:16,575 | INFO     | sum of square deviations: 447383272.0
[2025-06-04 21:55:28] 2025-06-05 01:55:16,575 | INFO     | sum of deviations: 1095462888.0
[2025-06-04 21:55:28] 2025-06-05 01:55:16,575 | INFO     | mean x: 1749085036.0
[2025-06-04 21:55:28] 2025-06-05 01:55:16,576 | INFO     | mean y: 2161664.946902655
[2025-06-04 21:55:28] 2025-06-05 01:55:16,576 | INFO     | -- intersect: -4280648768.1042104
[2025-06-04 21:55:28] 2025-06-05 01:55:16,576 | INFO     | intersect: -4280648768.1042104
[2025-06-04 21:55:28] 2025-06-05 01:55:16,576 | INFO     | chi2: 0.06045222247112772
[2025-06-04 21:55:28] 2025-06-05 01:55:16,576 | INFO     | current chi2=0.06045222247112772 (change=96.33779431425498 %)
[2025-06-04 21:55:28] 2025-06-05 01:55:16,576 | INFO     | sum of square deviations: 390582207.0
[2025-06-04 21:55:28] 2025-06-05 01:55:16,576 | INFO     | sum of deviations: 818586480.4999995
[2025-06-04 21:55:28] 2025-06-05 01:55:16,576 | INFO     | mean x: 1749085188.5
[2025-06-04 21:55:28] 2025-06-05 01:55:16,576 | INFO     | mean y: 2162393.138888889
[2025-06-04 21:55:28] 2025-06-05 01:55:16,576 | INFO     | -- intersect: -3663589560.96611
[2025-06-04 21:55:28] 2025-06-05 01:55:16,576 | INFO     | intersect: -3663589560.96611
[2025-06-04 21:55:28] 2025-06-05 01:55:16,577 | INFO     | chi2: 0.0590292107952936
[2025-06-04 21:55:28] 2025-06-05 01:55:16,577 | INFO     | current chi2=0.0590292107952936 (change=2.353944350869411 %)
[2025-06-04 21:55:28] 2025-06-05 01:55:16,577 | INFO     | left removable region: 20
[2025-06-04 21:55:28] 2025-06-05 01:55:16,577 | INFO     | sum of square deviations: 241429643.0
[2025-06-04 21:55:28] 2025-06-05 01:55:16,577 | INFO     | sum of deviations: 2078210677.5
[2025-06-04 21:55:28] 2025-06-05 01:55:16,577 | INFO     | mean x: 1749085310.5
[2025-06-04 21:55:28] 2025-06-05 01:55:16,577 | INFO     | mean y: 2156649.25
[2025-06-04 21:55:28] 2025-06-05 01:55:16,577 | INFO     | -- intersect: -15053856038.220621
[2025-06-04 21:55:28] 2025-06-05 01:55:16,577 | INFO     | intersect: -15053856038.220621
[2025-06-04 21:55:28] 2025-06-05 01:55:16,577 | INFO     | chi2: 0.04064450215795664
[2025-06-04 21:55:28] 2025-06-05 01:55:16,577 | INFO     | -- intersect: -15053856038.220621
[2025-06-04 21:55:28] 2025-06-05 01:55:16,577 | INFO     | current memory leak: 8.61 B/s (using 92 data points, chi2=0.04)
[2025-06-04 21:55:28] 2025-06-05 01:55:16,578 | INFO     | ..............................
[2025-06-04 21:55:28] 2025-06-05 01:55:16,578 | INFO     | . Timing measurements:
[2025-06-04 21:55:28] 2025-06-05 01:55:16,578 | INFO     | . get job = 0 s
[2025-06-04 21:55:28] 2025-06-05 01:55:16,578 | INFO     | . initial setup = 2 s
[2025-06-04 21:55:28] 2025-06-05 01:55:16,578 | INFO     | . payload setup = 7 s
[2025-06-04 21:55:28] 2025-06-05 01:55:16,578 | INFO     | . stage-in = 0 s
[2025-06-04 21:55:28] 2025-06-05 01:55:16,578 | INFO     | . payload execution = 7193 s
[2025-06-04 21:55:28] 2025-06-05 01:55:16,578 | INFO     | . stage-out = 0 s
[2025-06-04 21:55:28] 2025-06-05 01:55:16,578 | INFO     | . log creation = 0 s
[2025-06-04 21:55:28] 2025-06-05 01:55:16,578 | INFO     | ..............................
[2025-06-04 21:55:28] 2025-06-05 01:55:16,777 | INFO     | 
[2025-06-04 21:55:28] 2025-06-05 01:55:16,777 | INFO     | job summary report
[2025-06-04 21:55:28] 2025-06-05 01:55:16,777 | INFO     | --------------------------------------------------
[2025-06-04 21:55:28] 2025-06-05 01:55:16,777 | INFO     | PanDA job id: 6668327180
[2025-06-04 21:55:28] 2025-06-05 01:55:16,777 | INFO     | task id: 44871837
[2025-06-04 21:55:28] 2025-06-05 01:55:16,777 | INFO     | errors: (none)
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | pilot state: finished 
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | transexitcode: 0
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | exeerrorcode: 0
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | exeerrordiag: 
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | exitcode: 0
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | exitmsg: OK
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | cpuconsumptiontime: 51531 s
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | nevents: 400
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | neventsw: 0
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | pid: 2886019
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | pgrp: 2886019
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | corecount: 8
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | event service: False
[2025-06-04 21:55:28] 2025-06-05 01:55:16,778 | INFO     | sizes: {0: 2397221, 1: 2397420, 6: 2397626, 12: 2397654, 7205: 2425136, 7207: 2434077, 7211: 2434261, 7215: 2434431}
[2025-06-04 21:55:28] 2025-06-05 01:55:16,779 | INFO     | --------------------------------------------------
[2025-06-04 21:55:28] 2025-06-05 01:55:16,779 | INFO     | 
[2025-06-04 21:55:28] 2025-06-05 01:55:16,779 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 21:55:28] 2025-06-05 01:55:16,799 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,800 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,800 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,800 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,800 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,800 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,800 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,800 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,800 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,800 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,800 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,801 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,801 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,801 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,801 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,801 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,801 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,801 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:55:28] 2025-06-05 01:55:16,801 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,801 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:55:28] 2025-06-05 01:55:16,801 | INFO     | job 6668327180 has completed (purged errors)
[2025-06-04 21:55:28] 2025-06-05 01:55:16,801 | INFO     | overall cleanup function is called
[2025-06-04 21:55:28] 2025-06-05 01:55:17,806 | INFO     | --- collectZombieJob: --- 10, [2886019]
[2025-06-04 21:55:28] 2025-06-05 01:55:17,807 | INFO     | zombie collector waiting for pid 2886019
[2025-06-04 21:55:28] 2025-06-05 01:55:17,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:55:28] 2025-06-05 01:55:17,807 | INFO     | collected zombie processes
[2025-06-04 21:55:28] 2025-06-05 01:55:17,807 | INFO     | will attempt to kill all subprocesses of pid=2886019
[2025-06-04 21:55:28] 2025-06-05 01:55:18,199 | INFO     | process IDs to be killed: [2886019] (in reverse order)
[2025-06-04 21:55:28] 2025-06-05 01:55:18,361 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:55:28] 2025-06-05 01:55:18,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:55:28] 2025-06-05 01:55:18,383 | INFO     | did not find any defunct processes belonging to 2886019
[2025-06-04 21:55:28] 2025-06-05 01:55:18,406 | INFO     | did not find any defunct processes belonging to 2886019
[2025-06-04 21:55:28] 2025-06-05 01:55:18,406 | INFO     | ready for new job
[2025-06-04 21:55:28] 2025-06-05 01:55:18,406 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:55:28] 2025-06-05 01:55:18,408 | INFO     | **************************************
[2025-06-04 21:55:28] 2025-06-05 01:55:18,408 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:55:28] 2025-06-05 01:55:18,408 | INFO     | **************************************
[2025-06-04 21:55:28] 2025-06-05 01:55:18,408 | INFO     | 
[2025-06-04 21:55:28] 2025-06-05 01:55:18,423 | INFO     | architecture information:
[2025-06-04 21:55:28] 2025-06-05 01:55:18,424 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:55:28] 2025-06-05 01:55:18,439 | INFO     | cat /etc/os-release:
[2025-06-04 21:55:28] NAME="CentOS Linux"
[2025-06-04 21:55:28] VERSION="7 (Core)"
[2025-06-04 21:55:28] ID="centos"
[2025-06-04 21:55:28] ID_LIKE="rhel fedora"
[2025-06-04 21:55:28] VERSION_ID="7"
[2025-06-04 21:55:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:55:28] ANSI_COLOR="0;31"
[2025-06-04 21:55:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:55:28] HOME_URL="https://www.centos.org/"
[2025-06-04 21:55:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:55:28] 
[2025-06-04 21:55:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:55:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:55:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:55:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:55:28] 
[2025-06-04 21:55:28] 2025-06-05 01:55:18,439 | INFO     | **************************************
[2025-06-04 21:55:28] 2025-06-05 01:55:18,942 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 21:55:28] 2025-06-05 01:55:18,961 | INFO     | sufficient remaining disk space (96605306880 B)
[2025-06-04 21:55:28] 2025-06-05 01:55:18,961 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:55:28] 2025-06-05 01:55:18,962 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:55:28] 2025-06-05 01:55:18,962 | INFO     | update_server=False
[2025-06-04 21:55:28] 2025-06-05 01:55:18,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:55:28] 2025-06-05 01:55:18,962 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:55:28] 2025-06-05 01:55:18,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:55:28] 2025-06-05 01:55:18,963 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:55:28] 2025-06-05 01:55:18,963 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:55:28] 2025-06-05 01:55:18,963 | INFO     | aborting loop
[2025-06-04 21:55:28] 2025-06-05 01:55:18,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:55:28] 2025-06-05 01:55:18,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:55:28] 2025-06-05 01:55:19,027 | INFO     | all data control threads have been joined
[2025-06-04 21:55:28] 2025-06-05 01:55:19,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:55:28] 2025-06-05 01:55:19,967 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:19,970 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:20,008 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:20,032 | INFO     | [data] control thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:20,286 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:20,354 | INFO     | all job control threads have been joined
[2025-06-04 21:55:28] 2025-06-05 01:55:20,358 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:20,443 | INFO     | all payload control threads have been joined
[2025-06-04 21:55:28] 2025-06-05 01:55:20,602 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:20,663 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:20,916 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:21,061 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:21,080 | INFO     | [job] validate thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:21,299 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:21,359 | INFO     | [job] control thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:21,444 | INFO     | [payload] control thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:21,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:55:28] 2025-06-05 01:55:22,653 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:22,970 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:55:28] 2025-06-05 01:55:23,452 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139633099388736)>', '<ExcThread(monitor, started 139632473798400)>']
[2025-06-04 21:55:28] 2025-06-05 01:55:23,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:55:28] 2025-06-05 01:55:23,988 | INFO     | [monitor] control thread has ended
[2025-06-04 21:55:28] 2025-06-05 01:55:28,477 | INFO     | all workflow threads have been joined
[2025-06-04 21:55:28] 2025-06-05 01:55:28,477 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:55:28] 2025-06-05 01:55:28,478 | INFO     | traces error code: 0
[2025-06-04 21:55:28] 2025-06-05 01:55:28,478 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:55:28] 2025-06-05 01:55:28,746 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:55:28] 2025-06-05 01:55:28,748 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:55:28] 2025-06-05 01:55:28,750 [wrapper] pilotpid: 2874761
[2025-06-04 21:55:28] 2025-06-05 01:55:28,752 [wrapper] Pilot exit status: 0
[2025-06-04 21:55:28] 2025-06-05 01:55:28,762 [wrapper] pandaids: 6668327180
[2025-06-04 21:55:28] 2025-06-05 01:55:28,870 [wrapper] cleanup supervisor_pilot 3716357 2874762
[2025-06-04 21:55:28] 2025-06-05 01:55:28,874 [wrapper] Test setup, not cleaning
[2025-06-04 21:55:28] 2025-06-05 01:55:28,878 [wrapper] apfmon messages muted
[2025-06-04 21:55:28] 2025-06-05 01:55:28,881 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:55:28] 2025-06-05 01:55:28,884 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:55:28]  *** Error codes and diagnostics ***
[2025-06-04 21:55:28]     "exeErrorCode": 0,
[2025-06-04 21:55:28]     "exeErrorDiag": "",
[2025-06-04 21:55:28]     "pilotErrorCode": 0,
[2025-06-04 21:55:28]     "pilotErrorDiag": "",
[2025-06-04 21:55:28]  *** Listing of results directory ***
[2025-06-04 21:55:28] total 417600
[2025-06-04 21:55:28] -rw-r--r--. 1 boincer umatlas    495897 May 28 06:54 pilot3.tar.gz
[2025-06-04 21:55:28] -rw-r--r--. 1 boincer umatlas      5111 May 28 06:58 queuedata.json
[2025-06-04 21:55:28] -rwx------. 1 boincer umatlas     37140 May 28 06:58 runpilot2-wrapper.sh
[2025-06-04 21:55:28] -rw-r--r--. 1 boincer umatlas       100 Jun  4 19:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:55:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 19:54 run_atlas
[2025-06-04 21:55:28] -rw-r--r--. 1 boincer umatlas       105 Jun  4 19:54 job.xml
[2025-06-04 21:55:28] -rw-r--r--. 2 boincer umatlas 226873906 Jun  4 19:54 EVNT.44871834._003250.pool.root.1
[2025-06-04 21:55:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 19:54 start_atlas.sh
[2025-06-04 21:55:28] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 19:54 shared
[2025-06-04 21:55:28] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 19:54 input.tar.gz
[2025-06-04 21:55:28] -rw-r--r--. 1 boincer umatlas         0 Jun  4 19:54 boinc_lockfile
[2025-06-04 21:55:28] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 19:54 pandaJob.out
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas    987117 Jun  4 19:54 agis_schedconf.cvmfs.json
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas   1598969 Jun  4 19:54 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:55:28] drwx------. 4 boincer umatlas      4096 Jun  4 19:54 pilot3
[2025-06-04 21:55:28] -rw-r--r--. 1 boincer umatlas      6863 Jun  4 21:47 init_data.xml
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas 194907826 Jun  4 21:54 HITS.44871837._083268.pool.root.1
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas        95 Jun  4 21:54 pilot_heartbeat.json
[2025-06-04 21:55:28] -rw-r--r--. 1 boincer umatlas       529 Jun  4 21:54 boinc_task_state.xml
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas      1042 Jun  4 21:55 memory_monitor_summary.json
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas    336718 Jun  4 21:55 log.44871837._083268.job.log.tgz.1
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas      7713 Jun  4 21:55 heartbeat.json
[2025-06-04 21:55:28] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 21:55 boinc_mmap_file
[2025-06-04 21:55:28] -rw-r--r--. 1 boincer umatlas        27 Jun  4 21:55 wrapper_checkpoint.txt
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas      4476 Jun  4 21:55 pilotlog.txt
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas    668415 Jun  4 21:55 log.44871837._083268.job.log.1
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas       357 Jun  4 21:55 output.list
[2025-06-04 21:55:28] -rw-r--r--. 1 boincer umatlas       620 Jun  4 21:55 runtime_log
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas   1024000 Jun  4 21:55 result.tar.gz
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas       652 Jun  4 21:55 X4FNDmLfTe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPzbKDmkpka0m.diag
[2025-06-04 21:55:28] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 21:55 runtime_log.err
[2025-06-04 21:55:28] -rw-r--r--. 1 boincer umatlas     21122 Jun  4 21:55 stderr.txt
[2025-06-04 21:55:28] HITS file was successfully produced:
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas 194907826 Jun  4 21:54 shared/HITS.pool.root.1
[2025-06-04 21:55:28]  *** Contents of shared directory: ***
[2025-06-04 21:55:28] total 413420
[2025-06-04 21:55:28] -rw-r--r--. 2 boincer umatlas 226873906 Jun  4 19:54 ATLAS.root_0
[2025-06-04 21:55:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 19:54 start_atlas.sh
[2025-06-04 21:55:28] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 19:54 input.tar.gz
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas 194907826 Jun  4 21:54 HITS.pool.root.1
[2025-06-04 21:55:28] -rw-------. 1 boincer umatlas   1024000 Jun  4 21:55 result.tar.gz
21:55:30 (2868466): run_atlas exited; CPU time 51913.329932
21:55:30 (2868466): called boinc_finish(0)

</stderr_txt>
]]>

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