Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:50:14 (19429): wrapper (7.7.26015): starting
06:50:14 (19429): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 06:50:14] Arguments: --nthreads 8
[2025-06-05 06:50:14] Threads: 8
[2025-06-05 06:50:14] Checking for CVMFS
[2025-06-05 06:50:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:50:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:50:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:50:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:50:17] 2.11.2.0 14868 34317 100144 146806 2 60 17435993 25165824 2364 130560 0 17745665 99.772 21320394 2600 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 06:50:17] CVMFS is ok
[2025-06-05 06:50:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:50:17] Checking for apptainer binary...
[2025-06-05 06:50:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 06:50:17] Running /usr/bin/apptainer --version
[2025-06-05 06:50:17] apptainer version 1.3.2-1.el7
[2025-06-05 06:50:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:53:29] cg-vwn478.simple-grid.lan
[2025-06-05 06:53:29] apptainer works
[2025-06-05 06:53:29] Set ATHENA_PROC_NUMBER=8
[2025-06-05 06:53:29] Set ATHENA_CORE_NUMBER=8
[2025-06-05 06:53:29] Starting ATLAS job with PandaID=6667366073
[2025-06-05 06:53:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:29:38]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:29:38] 2025-06-05 10:06:45,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 13:29:38] 2025-06-05 10:06:47,736 | INFO     | monitor loop #1347: job 0:6667366073 is in state 'finished'
[2025-06-05 13:29:38] 2025-06-05 10:06:47,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 13:29:38] 2025-06-05 10:06:50,242 | INFO     | monitor loop #1348: job 0:6667366073 is in state 'finished'
[2025-06-05 13:29:38] 2025-06-05 10:06:50,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 13:29:38] 2025-06-05 10:06:51,210 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 13:29:38] 2025-06-05 10:06:51,211 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6667366073/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 13:29:38] 2025-06-05 10:06:51,211 | INFO     | extracted standard info from prmon json
[2025-06-05 13:29:38] 2025-06-05 10:06:51,212 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 13:29:38] 2025-06-05 10:06:51,212 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:29:38] 2025-06-05 10:06:51,212 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:29:38] 2025-06-05 10:06:51,212 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:29:38] 2025-06-05 10:06:51,218 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:29:38] 2025-06-05 10:06:51,219 | INFO     | sum of square deviations: 7960484140.0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,222 | INFO     | sum of deviations: 87449903597.0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,222 | INFO     | mean x: 1749108900.0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,223 | INFO     | mean y: 2459419.705084746
[2025-06-05 13:29:38] 2025-06-05 10:06:51,223 | INFO     | -- intersect: -19212377516.789925
[2025-06-05 13:29:38] 2025-06-05 10:06:51,223 | INFO     | intersect: -19212377516.789925
[2025-06-05 13:29:38] 2025-06-05 10:06:51,223 | INFO     | chi2: 4.192882864783666
[2025-06-05 13:29:38] 2025-06-05 10:06:51,224 | INFO     | sum of square deviations: 7562532492.5
[2025-06-05 13:29:38] 2025-06-05 10:06:51,227 | INFO     | sum of deviations: 105150656494.0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,227 | INFO     | mean x: 1749108747.5
[2025-06-05 13:29:38] 2025-06-05 10:06:51,227 | INFO     | mean y: 2466099.268965517
[2025-06-05 13:29:38] 2025-06-05 10:06:51,227 | INFO     | -- intersect: -24317420560.57973
[2025-06-05 13:29:38] 2025-06-05 10:06:51,227 | INFO     | intersect: -24317420560.57973
[2025-06-05 13:29:38] 2025-06-05 10:06:51,228 | INFO     | chi2: 3.434465274057333
[2025-06-05 13:29:38] 2025-06-05 10:06:51,228 | INFO     | current chi2=3.434465274057333 (change=18.088213174194262 %)
[2025-06-05 13:29:38] 2025-06-05 10:06:51,228 | INFO     | right removable region: 289
[2025-06-05 13:29:38] 2025-06-05 10:06:51,229 | INFO     | sum of square deviations: 7562532492.5
[2025-06-05 13:29:38] 2025-06-05 10:06:51,231 | INFO     | sum of deviations: 5128002515.000004
[2025-06-05 13:29:38] 2025-06-05 10:06:51,231 | INFO     | mean x: 1749109052.5
[2025-06-05 13:29:38] 2025-06-05 10:06:51,232 | INFO     | mean y: 2490852.6
[2025-06-05 13:29:38] 2025-06-05 10:06:51,232 | INFO     | -- intersect: -1183545125.3114398
[2025-06-05 13:29:38] 2025-06-05 10:06:51,232 | INFO     | intersect: -1183545125.3114398
[2025-06-05 13:29:38] 2025-06-05 10:06:51,232 | INFO     | chi2: 0.8366847620969363
[2025-06-05 13:29:38] 2025-06-05 10:06:51,232 | INFO     | current chi2=0.8366847620969363 (change=80.04511957335338 %)
[2025-06-05 13:29:38] 2025-06-05 10:06:51,233 | INFO     | sum of square deviations: 7178069470.0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,235 | INFO     | sum of deviations: 915196237.0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,236 | INFO     | mean x: 1749109205.0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,236 | INFO     | mean y: 2492494.6
[2025-06-05 13:29:38] 2025-06-05 10:06:51,236 | INFO     | -- intersect: -220517072.1377348
[2025-06-05 13:29:38] 2025-06-05 10:06:51,236 | INFO     | intersect: -220517072.1377348
[2025-06-05 13:29:38] 2025-06-05 10:06:51,236 | INFO     | chi2: 0.8055516792516642
[2025-06-05 13:29:38] 2025-06-05 10:06:51,236 | INFO     | current chi2=0.8055516792516642 (change=3.7210051211217303 %)
[2025-06-05 13:29:38] 2025-06-05 10:06:51,237 | INFO     | left removable region: 20
[2025-06-05 13:29:38] 2025-06-05 10:06:51,237 | INFO     | sum of square deviations: 6035722470.0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,239 | INFO     | sum of deviations: 15576950179.0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,240 | INFO     | mean x: 1749109327.0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,240 | INFO     | mean y: 2501596.219330855
[2025-06-05 13:29:38] 2025-06-05 10:06:51,240 | INFO     | -- intersect: -4511587475.921724
[2025-06-05 13:29:38] 2025-06-05 10:06:51,240 | INFO     | intersect: -4511587475.921724
[2025-06-05 13:29:38] 2025-06-05 10:06:51,241 | INFO     | chi2: 0.000747464741415269
[2025-06-05 13:29:38] 2025-06-05 10:06:51,241 | INFO     | -- intersect: -4511587475.921724
[2025-06-05 13:29:38] 2025-06-05 10:06:51,241 | INFO     | current memory leak: 2.58 B/s (using 269 data points, chi2=0.00)
[2025-06-05 13:29:38] 2025-06-05 10:06:51,242 | INFO     | ..............................
[2025-06-05 13:29:38] 2025-06-05 10:06:51,242 | INFO     | . Timing measurements:
[2025-06-05 13:29:38] 2025-06-05 10:06:51,242 | INFO     | . get job = 0 s
[2025-06-05 13:29:38] 2025-06-05 10:06:51,242 | INFO     | . initial setup = 7 s
[2025-06-05 13:29:38] 2025-06-05 10:06:51,242 | INFO     | . payload setup = 184 s
[2025-06-05 13:29:38] 2025-06-05 10:06:51,242 | INFO     | . stage-in = 0 s
[2025-06-05 13:29:38] 2025-06-05 10:06:51,243 | INFO     | . payload execution = 18138 s
[2025-06-05 13:29:38] 2025-06-05 10:06:51,243 | INFO     | . stage-out = 3 s
[2025-06-05 13:29:38] 2025-06-05 10:06:51,243 | INFO     | . log creation = 0 s
[2025-06-05 13:29:38] 2025-06-05 10:06:51,243 | INFO     | ..............................
[2025-06-05 13:29:38] 2025-06-05 10:06:51,756 | INFO     | 
[2025-06-05 13:29:38] 2025-06-05 10:06:51,756 | INFO     | job summary report
[2025-06-05 13:29:38] 2025-06-05 10:06:51,756 | INFO     | --------------------------------------------------
[2025-06-05 13:29:38] 2025-06-05 10:06:51,756 | INFO     | PanDA job id: 6667366073
[2025-06-05 13:29:38] 2025-06-05 10:06:51,756 | INFO     | task id: 44871837
[2025-06-05 13:29:38] 2025-06-05 10:06:51,756 | INFO     | errors: (none)
[2025-06-05 13:29:38] 2025-06-05 10:06:51,756 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:29:38] 2025-06-05 10:06:51,757 | INFO     | pilot state: finished 
[2025-06-05 13:29:38] 2025-06-05 10:06:51,757 | INFO     | transexitcode: 0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,757 | INFO     | exeerrorcode: 0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,757 | INFO     | exeerrordiag: 
[2025-06-05 13:29:38] 2025-06-05 10:06:51,757 | INFO     | exitcode: 0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,757 | INFO     | exitmsg: OK
[2025-06-05 13:29:38] 2025-06-05 10:06:51,757 | INFO     | cpuconsumptiontime: 68448 s
[2025-06-05 13:29:38] 2025-06-05 10:06:51,757 | INFO     | nevents: 400
[2025-06-05 13:29:38] 2025-06-05 10:06:51,757 | INFO     | neventsw: 0
[2025-06-05 13:29:38] 2025-06-05 10:06:51,757 | INFO     | pid: 3968
[2025-06-05 13:29:38] 2025-06-05 10:06:51,757 | INFO     | pgrp: 3968
[2025-06-05 13:29:38] 2025-06-05 10:06:51,757 | INFO     | corecount: 8
[2025-06-05 13:29:38] 2025-06-05 10:06:51,757 | INFO     | event service: False
[2025-06-05 13:29:38] 2025-06-05 10:06:51,758 | INFO     | sizes: {0: 2396564, 1: 2397306, 2: 2397448, 13: 2397448, 23: 2397504, 34: 2397532, 45: 2397688, 55: 2397716, 66: 2397744, 77: 2397772, 88: 2397828, 91: 2398342, 98
[2025-06-05 13:29:38] 2025-06-05 10:06:51,758 | INFO     | --------------------------------------------------
[2025-06-05 13:29:38] 2025-06-05 10:06:51,758 | INFO     | 
[2025-06-05 13:29:38] 2025-06-05 10:06:51,758 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-05 13:29:38] 2025-06-05 10:06:52,134 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,134 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,135 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,135 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,136 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,136 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,136 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:29:38] 2025-06-05 10:06:52,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,136 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:29:38] 2025-06-05 10:06:52,136 | INFO     | job 6667366073 has completed (purged errors)
[2025-06-05 13:29:38] 2025-06-05 10:06:52,136 | INFO     | overall cleanup function is called
[2025-06-05 13:29:38] 2025-06-05 10:06:53,145 | INFO     | --- collectZombieJob: --- 10, [3968]
[2025-06-05 13:29:38] 2025-06-05 10:06:53,146 | INFO     | zombie collector waiting for pid 3968
[2025-06-05 13:29:38] 2025-06-05 10:06:53,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:29:38] 2025-06-05 10:06:53,146 | INFO     | collected zombie processes
[2025-06-05 13:29:38] 2025-06-05 10:06:53,146 | INFO     | will attempt to kill all subprocesses of pid=3968
[2025-06-05 13:29:38] 2025-06-05 10:06:53,275 | INFO     | process IDs to be killed: [3968] (in reverse order)
[2025-06-05 13:29:38] 2025-06-05 10:06:54,061 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:29:38] 2025-06-05 10:06:54,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:29:38] 2025-06-05 10:06:54,068 | INFO     | did not find any defunct processes belonging to 3968
[2025-06-05 13:29:38] 2025-06-05 10:06:54,072 | INFO     | did not find any defunct processes belonging to 3968
[2025-06-05 13:29:38] 2025-06-05 10:06:54,072 | INFO     | ready for new job
[2025-06-05 13:29:38] 2025-06-05 10:06:54,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:29:38] 2025-06-05 10:06:54,075 | INFO     | **************************************
[2025-06-05 13:29:38] 2025-06-05 10:06:54,075 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:29:38] 2025-06-05 10:06:54,075 | INFO     | **************************************
[2025-06-05 13:29:38] 2025-06-05 10:06:54,075 | INFO     | 
[2025-06-05 13:29:38] 2025-06-05 10:06:54,076 | INFO     | pilot is running in a VM
[2025-06-05 13:29:38] 2025-06-05 10:06:54,076 | INFO     | architecture information:
[2025-06-05 13:29:38] 2025-06-05 10:06:54,088 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:29:38] 2025-06-05 10:06:54,348 | INFO     | cat /etc/os-release:
[2025-06-05 13:29:38] NAME="CentOS Linux"
[2025-06-05 13:29:38] VERSION="7 (Core)"
[2025-06-05 13:29:38] ID="centos"
[2025-06-05 13:29:38] ID_LIKE="rhel fedora"
[2025-06-05 13:29:38] VERSION_ID="7"
[2025-06-05 13:29:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:29:38] ANSI_COLOR="0;31"
[2025-06-05 13:29:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:29:38] HOME_URL="https://www.centos.org/"
[2025-06-05 13:29:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:29:38] 
[2025-06-05 13:29:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:29:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:29:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:29:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:29:38] 
[2025-06-05 13:29:38] 2025-06-05 10:06:54,349 | INFO     | **************************************
[2025-06-05 13:29:38] 2025-06-05 10:06:54,853 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-05 13:29:38] 2025-06-05 10:06:54,993 | INFO     | sufficient remaining disk space (497291362304 B)
[2025-06-05 13:29:38] 2025-06-05 10:06:54,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:29:38] 2025-06-05 10:06:54,994 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:29:38] 2025-06-05 10:06:54,994 | INFO     | update_server=False
[2025-06-05 13:29:38] 2025-06-05 10:06:54,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:29:38] 2025-06-05 10:06:54,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:29:38] 2025-06-05 10:06:55,267 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 13:29:38] 2025-06-05 10:06:55,268 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 13:29:38] 2025-06-05 10:06:55,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:29:38] 2025-06-05 10:06:55,268 | INFO     | will abort loop
[2025-06-05 13:29:38] 2025-06-05 10:06:55,545 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:29:38] 2025-06-05 10:06:55,617 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:29:38] 2025-06-05 10:06:55,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:29:38] 2025-06-05 10:06:55,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:29:38] 2025-06-05 10:06:55,813 | INFO     | all payload control threads have been joined
[2025-06-05 13:29:38] 2025-06-05 10:06:55,927 | INFO     | all data control threads have been joined
[2025-06-05 13:29:38] 2025-06-05 10:06:56,000 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:56,073 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:56,155 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:56,274 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:56,312 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:56,324 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:56,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:29:38] 2025-06-05 10:06:56,523 | INFO     | [job] validate thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:56,560 | INFO     | all job control threads have been joined
[2025-06-05 13:29:38] 2025-06-05 10:06:56,683 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:56,819 | INFO     | [payload] control thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:56,904 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:56,933 | INFO     | [data] control thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:56,950 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:57,003 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:57,389 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:57,567 | INFO     | [job] control thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:06:59,556 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:29:38] 2025-06-05 10:07:01,476 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293300860736)>', '<ExcThread(monitor, started 140292850165504)>']
[2025-06-05 13:29:38] 2025-06-05 10:07:01,653 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:29:38] 2025-06-05 10:07:01,654 | INFO     | [monitor] control thread has ended
[2025-06-05 13:29:38] 2025-06-05 10:07:06,502 | INFO     | all workflow threads have been joined
[2025-06-05 13:29:38] 2025-06-05 10:07:06,502 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:29:38] 2025-06-05 10:07:06,502 | INFO     | traces error code: 0
[2025-06-05 13:29:38] 2025-06-05 10:07:06,503 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:29:38] 2025-06-05 10:07:06,935 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:29:38] 2025-06-05 10:07:07,017 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:29:38] 2025-06-05 10:07:07,080 [wrapper] pilotpid: 27726
[2025-06-05 13:29:38] 2025-06-05 10:07:07,133 [wrapper] Pilot exit status: 0
[2025-06-05 13:29:38] 2025-06-05 10:07:07,457 [wrapper] pandaids: 6667366073
[2025-06-05 13:29:38] 2025-06-05 10:07:08,501 [wrapper] cleanup supervisor_pilot 12353 27727
[2025-06-05 13:29:38] 2025-06-05 10:07:08,608 [wrapper] Test setup, not cleaning
[2025-06-05 13:29:38] 2025-06-05 10:07:08,730 [wrapper] apfmon messages muted
[2025-06-05 13:29:38] 2025-06-05 10:07:08,857 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:29:38] 2025-06-05 10:07:08,961 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:29:38]  *** Error codes and diagnostics ***
[2025-06-05 13:29:38]     "exeErrorCode": 0,
[2025-06-05 13:29:38]     "exeErrorDiag": "",
[2025-06-05 13:29:38]     "pilotErrorCode": 0,
[2025-06-05 13:29:38]     "pilotErrorDiag": "",
[2025-06-05 13:29:38]  *** Listing of results directory ***
[2025-06-05 13:29:38] total 423004
[2025-06-05 13:29:38] -rw-r--r--. 1 boinc boinc    495897 May 27 19:43 pilot3.tar.gz
[2025-06-05 13:29:38] -rw-r--r--. 1 boinc boinc      5111 May 27 19:46 queuedata.json
[2025-06-05 13:29:38] -rwx------. 1 boinc boinc     37140 May 27 19:49 runpilot2-wrapper.sh
[2025-06-05 13:29:38] -rw-r--r--. 1 boinc boinc       100 Jun  5 06:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:29:38] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 06:50 run_atlas
[2025-06-05 13:29:38] -rw-r--r--. 1 boinc boinc       105 Jun  5 06:50 job.xml
[2025-06-05 13:29:38] -rw-r--r--. 2 boinc boinc 227524607 Jun  5 06:50 EVNT.44871834._002797.pool.root.1
[2025-06-05 13:29:38] -rw-r--r--. 1 boinc boinc      6392 Jun  5 06:50 init_data.xml
[2025-06-05 13:29:38] -rw-r--r--. 2 boinc boinc     15093 Jun  5 06:50 start_atlas.sh
[2025-06-05 13:29:38] drwxrwx--x. 2 boinc boinc        68 Jun  5 06:50 shared
[2025-06-05 13:29:38] -rw-r--r--. 2 boinc boinc    508881 Jun  5 06:50 input.tar.gz
[2025-06-05 13:29:38] -rw-r--r--. 1 boinc boinc         0 Jun  5 06:50 boinc_lockfile
[2025-06-05 13:29:38] -rw-r--r--. 1 boinc boinc      2559 Jun  5 06:53 pandaJob.out
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc    987109 Jun  5 06:56 agis_schedconf.cvmfs.json
[2025-06-05 13:29:38] drwx------. 4 boinc boinc      4096 Jun  5 06:56 pilot3
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc 197813639 Jun  5 12:04 HITS.44871837._071197.pool.root.1
[2025-06-05 13:29:38] -rw-r--r--. 1 boinc boinc       531 Jun  5 12:04 boinc_task_state.xml
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc      1017 Jun  5 12:05 memory_monitor_summary.json
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc   1598969 Jun  5 12:05 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc    417151 Jun  5 12:05 log.44871837._071197.job.log.tgz.1
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc        95 Jun  5 12:06 pilot_heartbeat.json
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc      7685 Jun  5 12:06 heartbeat.json
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc      4602 Jun  5 12:07 pilotlog.txt
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc   1585651 Jun  5 12:07 log.44871837._071197.job.log.1
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc       357 Jun  5 12:07 output.list
[2025-06-05 13:29:38] -rw-r--r--. 1 boinc boinc       620 Jun  5 12:07 runtime_log
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc   2017280 Jun  5 12:07 result.tar.gz
[2025-06-05 13:29:38] -rw-r--r--. 1 boinc boinc      8659 Jun  5 12:07 runtime_log.err
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc       656 Jun  5 12:07 QJSMDmQbDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTCSKDmtJqzXo.diag
[2025-06-05 13:29:38] -rw-r--r--. 1 boinc boinc      8192 Jun  5 13:29 boinc_mmap_file
[2025-06-05 13:29:38] -rw-r--r--. 1 boinc boinc        28 Jun  5 13:29 wrapper_checkpoint.txt
[2025-06-05 13:29:38] -rw-r--r--. 1 boinc boinc     20733 Jun  5 13:29 stderr.txt
[2025-06-05 13:29:38] HITS file was successfully produced:
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc 197813639 Jun  5 12:04 shared/HITS.pool.root.1
[2025-06-05 13:29:38]  *** Contents of shared directory: ***
[2025-06-05 13:29:38] total 417860
[2025-06-05 13:29:38] -rw-r--r--. 2 boinc boinc 227524607 Jun  5 06:50 ATLAS.root_0
[2025-06-05 13:29:38] -rw-r--r--. 2 boinc boinc     15093 Jun  5 06:50 start_atlas.sh
[2025-06-05 13:29:38] -rw-r--r--. 2 boinc boinc    508881 Jun  5 06:50 input.tar.gz
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc 197813639 Jun  5 12:04 HITS.pool.root.1
[2025-06-05 13:29:38] -rw-------. 1 boinc boinc   2017280 Jun  5 12:07 result.tar.gz
13:29:40 (19429): run_atlas exited; CPU time 68674.955049
13:29:40 (19429): called boinc_finish(0)

</stderr_txt>
]]>

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