Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:48:17 (201662): wrapper (7.7.26015): starting
19:48:17 (201662): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 19:48:17] Arguments: --nthreads 10
[2025-06-04 19:48:17] Threads: 10
[2025-06-04 19:48:17] Checking for CVMFS
[2025-06-04 19:48:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:48:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:48:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:48:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:48:18] 2.12.6.0 2656583 36750 299064 146798 0 263 30162531 32935936 14853 16776704 0 138265659 99.644 128369787 30211 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 19:48:18] CVMFS is ok
[2025-06-04 19:48:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:48:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:48:18] Further information can be found at the LHC@home message board.
[2025-06-04 19:48:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:48:18] Checking for apptainer binary...
[2025-06-04 19:48:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:48:18] Running /usr/bin/apptainer --version
[2025-06-04 19:48:18] apptainer version 1.4.1-1.el9
[2025-06-04 19:48:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:48:18] c-4-39.aglt2.org
[2025-06-04 19:48:18] apptainer works
[2025-06-04 19:48:18] Set ATHENA_PROC_NUMBER=10
[2025-06-04 19:48:18] Set ATHENA_CORE_NUMBER=10
[2025-06-04 19:48:18] Starting ATLAS job with PandaID=6680197422
[2025-06-04 19:48:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:15:57]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:15:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 21:15:57]  is_altstaged=None
[2025-06-04 21:15:57]  is_tar=False
[2025-06-04 21:15:57]  lfn=log.45006595._056990.job.log.tgz.1
[2025-06-04 21:15:57]  mtime=0
[2025-06-04 21:15:57]  protocol_id=None
[2025-06-04 21:15:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 21:15:57]  replicas=None
[2025-06-04 21:15:57]  scope=mc23_13p6TeV
[2025-06-04 21:15:57]  status=None
[2025-06-04 21:15:57]  status_code=0
[2025-06-04 21:15:57]  storage_token=
[2025-06-04 21:15:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6680197422/log.45006595._056990.job.log.tgz.1
[2025-06-04 21:15:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/b0/log.45006595._056990.job.log.tgz.1
[2025-06-04 21:15:57]  workdir=None
[2025-06-04 21:15:57] ]
[2025-06-04 21:15:57] 2025-06-05 01:15:29,741 | INFO     | transferring file log.45006595._056990.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6680197422/log.45006595._056990.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 21:15:57] 2025-06-05 01:15:29,741 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6680197422/log.45006595._056990.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056990.job
[2025-06-04 21:15:57] 2025-06-05 01:15:29,757 | INFO     | adding to output.list: log.45006595._056990.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/b0/log.45006595._056990.job.log.tg
[2025-06-04 21:15:57] 2025-06-05 01:15:29,758 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 21:15:57] 2025-06-05 01:15:29,759 | INFO     | summary of transferred files:
[2025-06-04 21:15:57] 2025-06-05 01:15:29,759 | INFO     |  -- lfn=log.45006595._056990.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 21:15:57] 2025-06-05 01:15:29,759 | INFO     | stage-out finished correctly
[2025-06-04 21:15:57] 2025-06-05 01:15:29,853 | INFO     | monitor loop #366: job 0:6680197422 is in state 'finished'
[2025-06-04 21:15:57] 2025-06-05 01:15:29,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:15:57] 2025-06-05 01:15:29,868 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 21:15:57] 2025-06-05 01:15:32,335 | INFO     | job 6680197422 has state=finished
[2025-06-04 21:15:57] 2025-06-05 01:15:32,335 | INFO     | preparing for final server update for job 6680197422 in state='finished'
[2025-06-04 21:15:57] 2025-06-05 01:15:32,336 | INFO     | this job has now completed (state=finished)
[2025-06-04 21:15:57] 2025-06-05 01:15:32,336 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 21:15:57] 2025-06-05 01:15:32,336 | INFO     | log transfer has been attempted: DONE
[2025-06-04 21:15:57] 2025-06-05 01:15:32,336 | INFO     | job 6680197422 has finished - writing final server update
[2025-06-04 21:15:57] 2025-06-05 01:15:32,336 | INFO     | total number of processed events: 400 (read)
[2025-06-04 21:15:57] 2025-06-05 01:15:32,351 | INFO     | executing command: lscpu
[2025-06-04 21:15:57] 2025-06-05 01:15:32,372 | INFO     | monitor loop #367: job 0:6680197422 is in state 'finished'
[2025-06-04 21:15:57] 2025-06-05 01:15:32,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:15:57] 2025-06-05 01:15:32,409 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 21:15:57] 2025-06-05 01:15:34,876 | INFO     | monitor loop #368: job 0:6680197422 is in state 'finished'
[2025-06-04 21:15:57] 2025-06-05 01:15:34,876 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:15:57] 2025-06-05 01:15:36,570 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 21:15:57] 2025-06-05 01:15:36,570 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680197422/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:15:57] 2025-06-05 01:15:36,571 | INFO     | extracted standard info from prmon json
[2025-06-04 21:15:57] 2025-06-05 01:15:36,571 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:15:57] 2025-06-05 01:15:36,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:15:57] 2025-06-05 01:15:36,572 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:15:57] 2025-06-05 01:15:36,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:15:57] 2025-06-05 01:15:36,574 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:15:57] 2025-06-05 01:15:36,575 | INFO     | sum of square deviations: 152882113.18987346
[2025-06-04 21:15:57] 2025-06-05 01:15:36,575 | INFO     | sum of deviations: -13358270373.556965
[2025-06-04 21:15:57] 2025-06-05 01:15:36,575 | INFO     | mean x: 1749083622.101266
[2025-06-04 21:15:57] 2025-06-05 01:15:36,575 | INFO     | mean y: 2485888.569620253
[2025-06-04 21:15:57] 2025-06-05 01:15:36,575 | INFO     | -- intersect: 152830906705.6667
[2025-06-04 21:15:57] 2025-06-05 01:15:36,576 | INFO     | intersect: 152830906705.6667
[2025-06-04 21:15:57] 2025-06-05 01:15:36,576 | INFO     | chi2: 0.17673649834709027
[2025-06-04 21:15:57] 2025-06-05 01:15:36,576 | INFO     | -- intersect: 152830906705.6667
[2025-06-04 21:15:57] 2025-06-05 01:15:36,576 | INFO     | current memory leak: -87.38 B/s (using 79 data points, chi2=0.18)
[2025-06-04 21:15:57] 2025-06-05 01:15:36,577 | INFO     | ..............................
[2025-06-04 21:15:57] 2025-06-05 01:15:36,577 | INFO     | . Timing measurements:
[2025-06-04 21:15:57] 2025-06-05 01:15:36,577 | INFO     | . get job = 0 s
[2025-06-04 21:15:57] 2025-06-05 01:15:36,577 | INFO     | . initial setup = 2 s
[2025-06-04 21:15:57] 2025-06-05 01:15:36,577 | INFO     | . payload setup = 7 s
[2025-06-04 21:15:57] 2025-06-05 01:15:36,577 | INFO     | . stage-in = 0 s
[2025-06-04 21:15:57] 2025-06-05 01:15:36,577 | INFO     | . payload execution = 5191 s
[2025-06-04 21:15:57] 2025-06-05 01:15:36,578 | INFO     | . stage-out = 0 s
[2025-06-04 21:15:57] 2025-06-05 01:15:36,578 | INFO     | . log creation = 0 s
[2025-06-04 21:15:57] 2025-06-05 01:15:36,578 | INFO     | ..............................
[2025-06-04 21:15:57] 2025-06-05 01:15:36,682 | INFO     | 
[2025-06-04 21:15:57] 2025-06-05 01:15:36,683 | INFO     | job summary report
[2025-06-04 21:15:57] 2025-06-05 01:15:36,683 | INFO     | --------------------------------------------------
[2025-06-04 21:15:57] 2025-06-05 01:15:36,683 | INFO     | PanDA job id: 6680197422
[2025-06-04 21:15:57] 2025-06-05 01:15:36,683 | INFO     | task id: 45006595
[2025-06-04 21:15:57] 2025-06-05 01:15:36,683 | INFO     | errors: (none)
[2025-06-04 21:15:57] 2025-06-05 01:15:36,683 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:15:57] 2025-06-05 01:15:36,683 | INFO     | pilot state: finished 
[2025-06-04 21:15:57] 2025-06-05 01:15:36,683 | INFO     | transexitcode: 0
[2025-06-04 21:15:57] 2025-06-05 01:15:36,683 | INFO     | exeerrorcode: 0
[2025-06-04 21:15:57] 2025-06-05 01:15:36,683 | INFO     | exeerrordiag: 
[2025-06-04 21:15:57] 2025-06-05 01:15:36,684 | INFO     | exitcode: 0
[2025-06-04 21:15:57] 2025-06-05 01:15:36,684 | INFO     | exitmsg: OK
[2025-06-04 21:15:57] 2025-06-05 01:15:36,684 | INFO     | cpuconsumptiontime: 39347 s
[2025-06-04 21:15:57] 2025-06-05 01:15:36,684 | INFO     | nevents: 400
[2025-06-04 21:15:57] 2025-06-05 01:15:36,684 | INFO     | neventsw: 0
[2025-06-04 21:15:57] 2025-06-05 01:15:36,684 | INFO     | pid: 211648
[2025-06-04 21:15:57] 2025-06-05 01:15:36,684 | INFO     | pgrp: 211648
[2025-06-04 21:15:57] 2025-06-05 01:15:36,684 | INFO     | corecount: 10
[2025-06-04 21:15:57] 2025-06-05 01:15:36,684 | INFO     | event service: False
[2025-06-04 21:15:57] 2025-06-05 01:15:36,684 | INFO     | sizes: {0: 2397068, 1: 2397267, 5: 2397473, 12: 2397529, 5202: 2423846, 5204: 2432971, 5211: 2433085}
[2025-06-04 21:15:57] 2025-06-05 01:15:36,684 | INFO     | --------------------------------------------------
[2025-06-04 21:15:57] 2025-06-05 01:15:36,685 | INFO     | 
[2025-06-04 21:15:57] 2025-06-05 01:15:36,685 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 21:15:57] 2025-06-05 01:15:36,705 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,706 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,706 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,706 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,706 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,707 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,707 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,707 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,707 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,707 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,707 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,707 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,707 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,708 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:15:57] 2025-06-05 01:15:36,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,708 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:15:57] 2025-06-05 01:15:36,708 | INFO     | job 6680197422 has completed (purged errors)
[2025-06-04 21:15:57] 2025-06-05 01:15:36,708 | INFO     | overall cleanup function is called
[2025-06-04 21:15:57] 2025-06-05 01:15:37,715 | INFO     | --- collectZombieJob: --- 10, [211648]
[2025-06-04 21:15:57] 2025-06-05 01:15:37,716 | INFO     | zombie collector waiting for pid 211648
[2025-06-04 21:15:57] 2025-06-05 01:15:37,716 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:15:57] 2025-06-05 01:15:37,716 | INFO     | collected zombie processes
[2025-06-04 21:15:57] 2025-06-05 01:15:37,716 | INFO     | will attempt to kill all subprocesses of pid=211648
[2025-06-04 21:15:57] 2025-06-05 01:15:38,097 | INFO     | process IDs to be killed: [211648] (in reverse order)
[2025-06-04 21:15:57] 2025-06-05 01:15:38,200 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:15:57] 2025-06-05 01:15:38,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:15:57] 2025-06-05 01:15:38,215 | INFO     | did not find any defunct processes belonging to 211648
[2025-06-04 21:15:57] 2025-06-05 01:15:38,230 | INFO     | did not find any defunct processes belonging to 211648
[2025-06-04 21:15:57] 2025-06-05 01:15:38,231 | INFO     | ready for new job
[2025-06-04 21:15:57] 2025-06-05 01:15:38,231 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:15:57] 2025-06-05 01:15:38,233 | INFO     | **************************************
[2025-06-04 21:15:57] 2025-06-05 01:15:38,233 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:15:57] 2025-06-05 01:15:38,234 | INFO     | **************************************
[2025-06-04 21:15:57] 2025-06-05 01:15:38,234 | INFO     | 
[2025-06-04 21:15:57] 2025-06-05 01:15:38,248 | INFO     | architecture information:
[2025-06-04 21:15:57] 2025-06-05 01:15:38,249 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:15:57] 2025-06-05 01:15:38,263 | INFO     | cat /etc/os-release:
[2025-06-04 21:15:57] NAME="CentOS Linux"
[2025-06-04 21:15:57] VERSION="7 (Core)"
[2025-06-04 21:15:57] ID="centos"
[2025-06-04 21:15:57] ID_LIKE="rhel fedora"
[2025-06-04 21:15:57] VERSION_ID="7"
[2025-06-04 21:15:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:15:57] ANSI_COLOR="0;31"
[2025-06-04 21:15:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:15:57] HOME_URL="https://www.centos.org/"
[2025-06-04 21:15:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:15:57] 
[2025-06-04 21:15:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:15:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:15:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:15:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:15:57] 
[2025-06-04 21:15:57] 2025-06-05 01:15:38,263 | INFO     | **************************************
[2025-06-04 21:15:57] 2025-06-05 01:15:38,766 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 21:15:57] 2025-06-05 01:15:38,783 | INFO     | sufficient remaining disk space (76597428224 B)
[2025-06-04 21:15:57] 2025-06-05 01:15:38,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:15:57] 2025-06-05 01:15:38,783 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:15:57] 2025-06-05 01:15:38,784 | INFO     | update_server=False
[2025-06-04 21:15:57] 2025-06-05 01:15:38,784 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:15:57] 2025-06-05 01:15:38,784 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:15:57] 2025-06-05 01:15:38,784 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:15:57] 2025-06-05 01:15:38,785 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:15:57] 2025-06-05 01:15:38,785 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:15:57] 2025-06-05 01:15:38,785 | INFO     | aborting loop
[2025-06-04 21:15:57] 2025-06-05 01:15:38,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:15:57] 2025-06-05 01:15:38,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:15:57] 2025-06-05 01:15:39,574 | INFO     | all data control threads have been joined
[2025-06-04 21:15:57] 2025-06-05 01:15:39,778 | INFO     | all payload control threads have been joined
[2025-06-04 21:15:57] 2025-06-05 01:15:39,789 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:39,791 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:39,995 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:40,003 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:40,028 | INFO     | all job control threads have been joined
[2025-06-04 21:15:57] 2025-06-05 01:15:40,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:15:57] 2025-06-05 01:15:40,580 | INFO     | [data] control thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:40,694 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:40,732 | INFO     | [job] validate thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:40,784 | INFO     | [payload] control thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:40,791 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:40,806 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:40,814 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:41,028 | INFO     | [job] control thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:41,202 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:41,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:15:57] 2025-06-05 01:15:42,698 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:44,495 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:49,365 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:15:57] 2025-06-05 01:15:50,370 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:15:57] 2025-06-05 01:15:52,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139926103115584)>', '<ExcThread(monitor, started 139925336880896)>']
[2025-06-04 21:15:57] 2025-06-05 01:15:52,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:15:57] 2025-06-05 01:15:52,856 | INFO     | [monitor] control thread has ended
[2025-06-04 21:15:57] 2025-06-05 01:15:57,033 | INFO     | all workflow threads have been joined
[2025-06-04 21:15:57] 2025-06-05 01:15:57,033 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:15:57] 2025-06-05 01:15:57,033 | INFO     | traces error code: 0
[2025-06-04 21:15:57] 2025-06-05 01:15:57,034 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:15:57] 2025-06-05 01:15:57,195 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:15:57] 2025-06-05 01:15:57,198 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:15:57] 2025-06-05 01:15:57,201 [wrapper] pilotpid: 205235
[2025-06-04 21:15:57] 2025-06-05 01:15:57,204 [wrapper] Pilot exit status: 0
[2025-06-04 21:15:57] 2025-06-05 01:15:57,216 [wrapper] pandaids: 6680197422
[2025-06-04 21:15:57] 2025-06-05 01:15:57,291 [wrapper] cleanup supervisor_pilot  626520 205236
[2025-06-04 21:15:57] 2025-06-05 01:15:57,295 [wrapper] Test setup, not cleaning
[2025-06-04 21:15:57] 2025-06-05 01:15:57,298 [wrapper] apfmon messages muted
[2025-06-04 21:15:57] 2025-06-05 01:15:57,301 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:15:57] 2025-06-05 01:15:57,304 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:15:57]  *** Error codes and diagnostics ***
[2025-06-04 21:15:57]     "exeErrorCode": 0,
[2025-06-04 21:15:57]     "exeErrorDiag": "",
[2025-06-04 21:15:57]     "pilotErrorCode": 0,
[2025-06-04 21:15:57]     "pilotErrorDiag": "",
[2025-06-04 21:15:57]  *** Listing of results directory ***
[2025-06-04 21:15:57] total 384112
[2025-06-04 21:15:57] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 19:03 pilot3.tar.gz
[2025-06-04 21:15:57] -rwx------. 1 boincer umatlas     37140 Jun  4 19:47 runpilot2-wrapper.sh
[2025-06-04 21:15:57] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 19:47 queuedata.json
[2025-06-04 21:15:57] -rw-r--r--. 1 boincer umatlas       100 Jun  4 19:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:15:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 19:48 run_atlas
[2025-06-04 21:15:57] -rw-r--r--. 1 boincer umatlas       105 Jun  4 19:48 job.xml
[2025-06-04 21:15:57] -rw-r--r--. 2 boincer umatlas 215928525 Jun  4 19:48 EVNT.45006593._002017.pool.root.1
[2025-06-04 21:15:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 19:48 start_atlas.sh
[2025-06-04 21:15:57] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 19:48 shared
[2025-06-04 21:15:57] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 19:48 input.tar.gz
[2025-06-04 21:15:57] -rw-r--r--. 1 boincer umatlas         0 Jun  4 19:48 boinc_lockfile
[2025-06-04 21:15:57] -rw-r--r--. 1 boincer umatlas      2523 Jun  4 19:48 pandaJob.out
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas    987117 Jun  4 19:48 agis_schedconf.cvmfs.json
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas   1598969 Jun  4 19:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:15:57] drwx------. 4 boincer umatlas      4096 Jun  4 19:48 pilot3
[2025-06-04 21:15:57] -rw-r--r--. 1 boincer umatlas      6673 Jun  4 21:12 init_data.xml
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas 171935341 Jun  4 21:14 HITS.45006595._056990.pool.root.1
[2025-06-04 21:15:57] -rw-r--r--. 1 boincer umatlas       529 Jun  4 21:14 boinc_task_state.xml
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas        95 Jun  4 21:15 pilot_heartbeat.json
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas      1050 Jun  4 21:15 memory_monitor_summary.json
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas    327937 Jun  4 21:15 log.45006595._056990.job.log.tgz.1
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas      7733 Jun  4 21:15 heartbeat.json
[2025-06-04 21:15:57] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 21:15 boinc_mmap_file
[2025-06-04 21:15:57] -rw-r--r--. 1 boincer umatlas        27 Jun  4 21:15 wrapper_checkpoint.txt
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas      4548 Jun  4 21:15 pilotlog.txt
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas    495070 Jun  4 21:15 log.45006595._056990.job.log.1
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas       357 Jun  4 21:15 output.list
[2025-06-04 21:15:57] -rw-r--r--. 1 boincer umatlas       620 Jun  4 21:15 runtime_log
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas    839680 Jun  4 21:15 result.tar.gz
[2025-06-04 21:15:57] -rw-r--r--. 1 boincer umatlas      8651 Jun  4 21:15 runtime_log.err
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas       654 Jun  4 21:15 lnMMDm00Ch7n9Rq4apOajLDm4fhM0noT9bVof3QYDma4aKDmJT5spn.diag
[2025-06-04 21:15:57] -rw-r--r--. 1 boincer umatlas     21369 Jun  4 21:15 stderr.txt
[2025-06-04 21:15:57] HITS file was successfully produced:
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas 171935341 Jun  4 21:14 shared/HITS.pool.root.1
[2025-06-04 21:15:57]  *** Contents of shared directory: ***
[2025-06-04 21:15:57] total 380112
[2025-06-04 21:15:57] -rw-r--r--. 2 boincer umatlas 215928525 Jun  4 19:48 ATLAS.root_0
[2025-06-04 21:15:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 19:48 start_atlas.sh
[2025-06-04 21:15:57] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 19:48 input.tar.gz
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas 171935341 Jun  4 21:14 HITS.pool.root.1
[2025-06-04 21:15:57] -rw-------. 1 boincer umatlas    839680 Jun  4 21:15 result.tar.gz
21:15:59 (201662): run_atlas exited; CPU time 39489.633664
21:15:59 (201662): called boinc_finish(0)

</stderr_txt>
]]>

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