Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:47:56 (1029427): wrapper (7.7.26015): starting
01:47:56 (1029427): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 01:47:56] Arguments: --nthreads 3
[2025-06-05 01:47:56] Threads: 3
[2025-06-05 01:47:56] Checking for CVMFS
[2025-06-05 01:47:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:47:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:47:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:47:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:47:56] 2.9.2.0 9565 3177 84824 146798 0 56 33768771 36864000 0 130560 0 2742672 99.992 760063 37070 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 01:47:56] CVMFS is ok
[2025-06-05 01:47:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:47:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:47:56] Further information can be found at the LHC@home message board.
[2025-06-05 01:47:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:47:56] Checking for apptainer binary...
[2025-06-05 01:47:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:47:56] Running /usr/bin/apptainer --version
[2025-06-05 01:47:56] apptainer version 1.3.6-6.1
[2025-06-05 01:47:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:47:56] atlasA223
[2025-06-05 01:47:56] apptainer works
[2025-06-05 01:47:56] Set ATHENA_PROC_NUMBER=3
[2025-06-05 01:47:56] Set ATHENA_CORE_NUMBER=3
[2025-06-05 01:47:56] Starting ATLAS job with PandaID=6667580924
[2025-06-05 01:47:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:36:00]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:36:00] 2025-06-05 01:35:37,722 | INFO     | PID=1033070 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 03:36:00] 2025-06-05 01:35:38,673 | WARNING  | process 1039559 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 03:36:00] 2025-06-05 01:35:38,673 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6667580924/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:36:00] 2025-06-05 01:35:38,726 | INFO     | number of running child processes to parent process 1039559: 1
[2025-06-05 03:36:00] 2025-06-05 01:35:38,726 | INFO     | maximum number of monitored processes: 6
[2025-06-05 03:36:00] 2025-06-05 01:35:41,228 | INFO     | monitor loop #496: job 0:6667580924 is in state 'finished'
[2025-06-05 03:36:00] 2025-06-05 01:35:41,228 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:36:00] 2025-06-05 01:35:41,280 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 03:36:00] 2025-06-05 01:35:41,280 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6667580924/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:36:00] 2025-06-05 01:35:41,281 | INFO     | extracted standard info from prmon json
[2025-06-05 03:36:00] 2025-06-05 01:35:41,281 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:36:00] 2025-06-05 01:35:41,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:36:00] 2025-06-05 01:35:41,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:36:00] 2025-06-05 01:35:41,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:36:00] 2025-06-05 01:35:41,282 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:36:00] 2025-06-05 01:35:41,282 | INFO     | sum of square deviations: 369281342.5
[2025-06-05 03:36:00] 2025-06-05 01:35:41,282 | INFO     | sum of deviations: 745002119.5000026
[2025-06-05 03:36:00] 2025-06-05 01:35:41,282 | INFO     | mean x: 1749084105.5
[2025-06-05 03:36:00] 2025-06-05 01:35:41,282 | INFO     | mean y: 2379054.4056603773
[2025-06-05 03:36:00] 2025-06-05 01:35:41,282 | INFO     | -- intersect: -3526289242.1283464
[2025-06-05 03:36:00] 2025-06-05 01:35:41,282 | INFO     | intersect: -3526289242.1283464
[2025-06-05 03:36:00] 2025-06-05 01:35:41,282 | INFO     | chi2: 1.5107723062294947
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | sum of deviations: 1210171496.9999983
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | mean x: 1749083953.0
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | mean y: 2380478.9504950494
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | -- intersect: -6623713720.089144
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | intersect: -6623713720.089144
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | chi2: 1.5137683055645623
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | current chi2=1.5137683055645623 (change=-0.19830912459236982 %)
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | right removable region: 100
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | sum of deviations: -11788623686.000002
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | mean x: 1749084258.0
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | mean y: 2416225.613861386
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | -- intersect: 64549089845.951385
[2025-06-05 03:36:00] 2025-06-05 01:35:41,283 | INFO     | intersect: 64549089845.951385
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | chi2: 0.06649186050483466
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | current chi2=0.06649186050483466 (change=95.59881656351106 %)
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | sum of deviations: -9412348952.5
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | mean x: 1749084410.5
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | mean y: 2408215.03125
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | -- intersect: 60017958453.94798
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | intersect: 60017958453.94798
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | chi2: 0.06399576362486961
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | current chi2=0.06399576362486961 (change=3.753988625094279 %)
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | left removable region: 20
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | sum of square deviations: 158737860.0
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | sum of deviations: -3819918881.0
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | mean x: 1749084532.5
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | mean y: 2391167.35
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | -- intersect: 42092923508.92124
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | intersect: 42092923508.92124
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | chi2: 0.04735468016877151
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | -- intersect: 42092923508.92124
[2025-06-05 03:36:00] 2025-06-05 01:35:41,284 | INFO     | current memory leak: -24.06 B/s (using 80 data points, chi2=0.05)
[2025-06-05 03:36:00] 2025-06-05 01:35:41,285 | INFO     | ..............................
[2025-06-05 03:36:00] 2025-06-05 01:35:41,285 | INFO     | . Timing measurements:
[2025-06-05 03:36:00] 2025-06-05 01:35:41,285 | INFO     | . get job = 0 s
[2025-06-05 03:36:00] 2025-06-05 01:35:41,285 | INFO     | . initial setup = 1 s
[2025-06-05 03:36:00] 2025-06-05 01:35:41,285 | INFO     | . payload setup = 3 s
[2025-06-05 03:36:00] 2025-06-05 01:35:41,285 | INFO     | . stage-in = 0 s
[2025-06-05 03:36:00] 2025-06-05 01:35:41,285 | INFO     | . payload execution = 6430 s
[2025-06-05 03:36:00] 2025-06-05 01:35:41,285 | INFO     | . stage-out = 0 s
[2025-06-05 03:36:00] 2025-06-05 01:35:41,285 | INFO     | . log creation = 0 s
[2025-06-05 03:36:00] 2025-06-05 01:35:41,285 | INFO     | ..............................
[2025-06-05 03:36:00] 2025-06-05 01:35:41,315 | INFO     | 
[2025-06-05 03:36:00] 2025-06-05 01:35:41,315 | INFO     | job summary report
[2025-06-05 03:36:00] 2025-06-05 01:35:41,315 | INFO     | --------------------------------------------------
[2025-06-05 03:36:00] 2025-06-05 01:35:41,315 | INFO     | PanDA job id: 6667580924
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | task id: 44871837
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | errors: (none)
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | pilot state: finished 
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | transexitcode: 0
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | exeerrorcode: 0
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | exeerrordiag: 
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | exitcode: 0
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | exitmsg: OK
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | cpuconsumptiontime: 18616 s
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | nevents: 400
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | neventsw: 0
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | pid: 1039559
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | pgrp: 1039559
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | corecount: 3
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | event service: False
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | sizes: {0: 2397393, 3: 2397599, 11: 2397627, 6438: 2433611, 6442: 2433611, 6446: 2433781}
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | --------------------------------------------------
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | 
[2025-06-05 03:36:00] 2025-06-05 01:35:41,316 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 03:36:00] 2025-06-05 01:35:41,329 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | job 6667580924 has completed (purged errors)
[2025-06-05 03:36:00] 2025-06-05 01:35:41,330 | INFO     | overall cleanup function is called
[2025-06-05 03:36:00] 2025-06-05 01:35:42,337 | INFO     | --- collectZombieJob: --- 10, [1039559]
[2025-06-05 03:36:00] 2025-06-05 01:35:42,337 | INFO     | zombie collector waiting for pid 1039559
[2025-06-05 03:36:00] 2025-06-05 01:35:42,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:36:00] 2025-06-05 01:35:42,337 | INFO     | collected zombie processes
[2025-06-05 03:36:00] 2025-06-05 01:35:42,337 | INFO     | will attempt to kill all subprocesses of pid=1039559
[2025-06-05 03:36:00] 2025-06-05 01:35:42,378 | INFO     | process IDs to be killed: [1039559] (in reverse order)
[2025-06-05 03:36:00] 2025-06-05 01:35:42,403 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:36:00] 2025-06-05 01:35:42,403 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:36:00] 2025-06-05 01:35:42,404 | INFO     | did not find any defunct processes belonging to 1039559
[2025-06-05 03:36:00] 2025-06-05 01:35:42,405 | INFO     | did not find any defunct processes belonging to 1039559
[2025-06-05 03:36:00] 2025-06-05 01:35:42,406 | INFO     | ready for new job
[2025-06-05 03:36:00] 2025-06-05 01:35:42,406 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:36:00] 2025-06-05 01:35:42,406 | INFO     | **************************************
[2025-06-05 03:36:00] 2025-06-05 01:35:42,406 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:36:00] 2025-06-05 01:35:42,406 | INFO     | **************************************
[2025-06-05 03:36:00] 2025-06-05 01:35:42,406 | INFO     | 
[2025-06-05 03:36:00] 2025-06-05 01:35:42,407 | INFO     | architecture information:
[2025-06-05 03:36:00] 2025-06-05 01:35:42,407 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:36:00] 2025-06-05 01:35:42,416 | INFO     | cat /etc/os-release:
[2025-06-05 03:36:00] NAME="CentOS Linux"
[2025-06-05 03:36:00] VERSION="7 (Core)"
[2025-06-05 03:36:00] ID="centos"
[2025-06-05 03:36:00] ID_LIKE="rhel fedora"
[2025-06-05 03:36:00] VERSION_ID="7"
[2025-06-05 03:36:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:36:00] ANSI_COLOR="0;31"
[2025-06-05 03:36:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:36:00] HOME_URL="https://www.centos.org/"
[2025-06-05 03:36:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:36:00] 
[2025-06-05 03:36:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:36:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:36:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:36:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:36:00] 
[2025-06-05 03:36:00] 2025-06-05 01:35:42,416 | INFO     | **************************************
[2025-06-05 03:36:00] 2025-06-05 01:35:42,919 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 03:36:00] 2025-06-05 01:35:42,933 | INFO     | sufficient remaining disk space (368150839296 B)
[2025-06-05 03:36:00] 2025-06-05 01:35:42,933 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:36:00] 2025-06-05 01:35:42,933 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:36:00] 2025-06-05 01:35:42,933 | INFO     | update_server=False
[2025-06-05 03:36:00] 2025-06-05 01:35:42,933 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:36:00] 2025-06-05 01:35:42,933 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:36:00] 2025-06-05 01:35:42,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:36:00] 2025-06-05 01:35:42,933 | INFO     | aborting loop
[2025-06-05 03:36:00] 2025-06-05 01:35:43,053 | INFO     | all payload control threads have been joined
[2025-06-05 03:36:00] 2025-06-05 01:35:43,131 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:36:00] 2025-06-05 01:35:43,739 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:36:00] 2025-06-05 01:35:43,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:36:00] 2025-06-05 01:35:43,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:36:00] 2025-06-05 01:35:43,881 | INFO     | all data control threads have been joined
[2025-06-05 03:36:00] 2025-06-05 01:35:43,939 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:43,939 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:43,939 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:43,979 | INFO     | all job control threads have been joined
[2025-06-05 03:36:00] 2025-06-05 01:35:44,056 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:44,059 | INFO     | [payload] control thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:44,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:36:00] 2025-06-05 01:35:44,305 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:44,645 | INFO     | [job] validate thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:44,734 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:44,829 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:44,864 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:44,884 | INFO     | [data] control thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:44,985 | INFO     | [job] control thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:45,123 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:46,284 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:47,138 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:53,359 | INFO     | job.realtimelogging is not enabled
[2025-06-05 03:36:00] 2025-06-05 01:35:54,365 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:36:00] 2025-06-05 01:35:55,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139715371034432)>', '<ExcThread(monitor, started 139714581477120)>']
[2025-06-05 03:36:00] 2025-06-05 01:35:56,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:36:00] 2025-06-05 01:35:56,809 | INFO     | [monitor] control thread has ended
[2025-06-05 03:36:00] 2025-06-05 01:36:00,858 | INFO     | all workflow threads have been joined
[2025-06-05 03:36:00] 2025-06-05 01:36:00,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:36:00] 2025-06-05 01:36:00,859 | INFO     | traces error code: 0
[2025-06-05 03:36:00] 2025-06-05 01:36:00,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:36:00] 2025-06-05 01:36:00,911 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:36:00] 2025-06-05 01:36:00,914 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:36:00] 2025-06-05 01:36:00,916 [wrapper] pilotpid: 1033070
[2025-06-05 03:36:00] 2025-06-05 01:36:00,919 [wrapper] Pilot exit status: 0
[2025-06-05 03:36:00] 2025-06-05 01:36:00,926 [wrapper] pandaids: 6667580924
[2025-06-05 03:36:00] 2025-06-05 01:36:00,943 [wrapper] cleanup supervisor_pilot 1053931 1033071
[2025-06-05 03:36:00] 2025-06-05 01:36:00,946 [wrapper] Test setup, not cleaning
[2025-06-05 03:36:00] 2025-06-05 01:36:00,948 [wrapper] apfmon messages muted
[2025-06-05 03:36:00] 2025-06-05 01:36:00,951 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:36:00] 2025-06-05 01:36:00,954 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:36:00]  *** Error codes and diagnostics ***
[2025-06-05 03:36:00]     "exeErrorCode": 0,
[2025-06-05 03:36:00]     "exeErrorDiag": "",
[2025-06-05 03:36:00]     "pilotErrorCode": 0,
[2025-06-05 03:36:00]     "pilotErrorDiag": "",
[2025-06-05 03:36:00]  *** Listing of results directory ***
[2025-06-05 03:36:01] total 425504
[2025-06-05 03:36:01] -rw-r--r-- 1 boinc boinc    495897 May 27 22:43 pilot3.tar.gz
[2025-06-05 03:36:01] -rw-r--r-- 1 boinc boinc      5111 May 27 22:56 queuedata.json
[2025-06-05 03:36:01] -rwx------ 1 boinc boinc     37140 May 27 22:59 runpilot2-wrapper.sh
[2025-06-05 03:36:01] -rw-r--r-- 1 boinc boinc       100 Jun  5 01:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:36:01] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 01:47 run_atlas
[2025-06-05 03:36:01] -rw-r--r-- 1 boinc boinc       105 Jun  5 01:47 job.xml
[2025-06-05 03:36:01] -rw-r--r-- 2 boinc boinc 227214773 Jun  5 01:47 EVNT.44871834._002878.pool.root.1
[2025-06-05 03:36:01] -rw-r--r-- 1 boinc boinc      6931 Jun  5 01:47 init_data.xml
[2025-06-05 03:36:01] drwxrwx--x 2 boinc boinc      4096 Jun  5 01:47 shared
[2025-06-05 03:36:01] -rw-r--r-- 2 boinc boinc    508879 Jun  5 01:47 input.tar.gz
[2025-06-05 03:36:01] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:47 start_atlas.sh
[2025-06-05 03:36:01] -rw-r--r-- 1 boinc boinc         0 Jun  5 01:47 boinc_lockfile
[2025-06-05 03:36:01] -rw-r--r-- 1 boinc boinc      2558 Jun  5 01:47 pandaJob.out
[2025-06-05 03:36:01] -rw------- 1 boinc boinc    987117 Jun  5 01:48 agis_schedconf.cvmfs.json
[2025-06-05 03:36:01] -rw------- 1 boinc boinc   1598969 Jun  5 01:48 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:36:01] drwx------ 4 boinc boinc      4096 Jun  5 01:48 pilot3
[2025-06-05 03:36:01] -rw------- 1 boinc boinc 202983102 Jun  5 03:35 HITS.44871837._073364.pool.root.1
[2025-06-05 03:36:01] -rw-r--r-- 1 boinc boinc       529 Jun  5 03:35 boinc_task_state.xml
[2025-06-05 03:36:01] -rw------- 1 boinc boinc      1012 Jun  5 03:35 memory_monitor_summary.json
[2025-06-05 03:36:01] -rw------- 1 boinc boinc        95 Jun  5 03:35 pilot_heartbeat.json
[2025-06-05 03:36:01] -rw------- 1 boinc boinc    229383 Jun  5 03:35 log.44871837._073364.job.log.tgz.1
[2025-06-05 03:36:01] -rw------- 1 boinc boinc      7647 Jun  5 03:35 heartbeat.json
[2025-06-05 03:36:01] -rw-r--r-- 1 boinc boinc      8192 Jun  5 03:35 boinc_mmap_file
[2025-06-05 03:36:01] -rw-r--r-- 1 boinc boinc        27 Jun  5 03:35 wrapper_checkpoint.txt
[2025-06-05 03:36:01] -rw------- 1 boinc boinc      4429 Jun  5 03:36 pilotlog.txt
[2025-06-05 03:36:01] -rw------- 1 boinc boinc    614109 Jun  5 03:36 log.44871837._073364.job.log.1
[2025-06-05 03:36:01] -rw------- 1 boinc boinc       357 Jun  5 03:36 output.list
[2025-06-05 03:36:01] -rw-r--r-- 1 boinc boinc       620 Jun  5 03:36 runtime_log
[2025-06-05 03:36:01] -rw------- 1 boinc boinc    860160 Jun  5 03:36 result.tar.gz
[2025-06-05 03:36:01] -rw-r--r-- 1 boinc boinc      8748 Jun  5 03:36 runtime_log.err
[2025-06-05 03:36:01] -rw------- 1 boinc boinc       662 Jun  5 03:36 ADTMDmmZGe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuNaKDmWgIyhn.diag
[2025-06-05 03:36:01] -rw-r--r-- 1 boinc boinc     21112 Jun  5 03:36 stderr.txt
[2025-06-05 03:36:01] HITS file was successfully produced:
[2025-06-05 03:36:01] -rw------- 1 boinc boinc 202983102 Jun  5 03:35 shared/HITS.pool.root.1
[2025-06-05 03:36:01]  *** Contents of shared directory: ***
[2025-06-05 03:36:01] total 421484
[2025-06-05 03:36:01] -rw-r--r-- 2 boinc boinc 227214773 Jun  5 01:47 ATLAS.root_0
[2025-06-05 03:36:01] -rw-r--r-- 2 boinc boinc    508879 Jun  5 01:47 input.tar.gz
[2025-06-05 03:36:01] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:47 start_atlas.sh
[2025-06-05 03:36:01] -rw------- 1 boinc boinc 202983102 Jun  5 03:35 HITS.pool.root.1
[2025-06-05 03:36:01] -rw------- 1 boinc boinc    860160 Jun  5 03:36 result.tar.gz
03:36:02 (1029427): run_atlas exited; CPU time 18636.888758
03:36:02 (1029427): called boinc_finish(0)

</stderr_txt>
]]>

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