Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:46:42 (33264): wrapper (7.7.26015): starting
19:46:42 (33264): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 19:46:42] Arguments: --nthreads 10
[2025-06-04 19:46:42] Threads: 10
[2025-06-04 19:46:42] Checking for CVMFS
[2025-06-04 19:46:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:46:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:46:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:46:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:46:42] 2.11.2.0 1570 109521 295696 146798 3 244 13243850 18432000 16237 130560 0 490150167 99.072 1007284060 35427 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 19:46:42] CVMFS is ok
[2025-06-04 19:46:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:46:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:46:42] Further information can be found at the LHC@home message board.
[2025-06-04 19:46:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:46:42] Checking for apptainer binary...
[2025-06-04 19:46:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:46:42] Running /usr/bin/apptainer --version
[2025-06-04 19:46:42] apptainer version 1.3.2-1.el7
[2025-06-04 19:46:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:46:47] c-210-9.aglt2.org
[2025-06-04 19:46:47] apptainer works
[2025-06-04 19:46:48] Set ATHENA_PROC_NUMBER=10
[2025-06-04 19:46:48] Set ATHENA_CORE_NUMBER=10
[2025-06-04 19:46:48] Starting ATLAS job with PandaID=6668229764
[2025-06-04 19:46:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:11:03 (35520): wrapper (7.7.26015): starting
02:11:03 (35520): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 02:11:03] Arguments: --nthreads 10
[2025-06-05 02:11:03] Threads: 10
[2025-06-05 02:11:03] This job has been restarted, cleaning up previous attempt
[2025-06-05 02:11:03] Checking for CVMFS
[2025-06-05 02:11:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:11:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:11:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:11:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:11:04] 2.11.2.0 1570 109905 302872 146808 3 385 15611354 18432000 18702 130560 0 491570055 99.073 1008214460 35435 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 02:11:04] CVMFS is ok
[2025-06-05 02:11:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 02:11:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 02:11:04] Further information can be found at the LHC@home message board.
[2025-06-05 02:11:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:11:04] Checking for apptainer binary...
[2025-06-05 02:11:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:11:04] Running /usr/bin/apptainer --version
[2025-06-05 02:11:04] apptainer version 1.3.2-1.el7
[2025-06-05 02:11:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:11:06] c-210-9.aglt2.org
[2025-06-05 02:11:06] apptainer works
[2025-06-05 02:11:06] Set ATHENA_PROC_NUMBER=10
[2025-06-05 02:11:06] Set ATHENA_CORE_NUMBER=10
[2025-06-05 02:11:06] Starting ATLAS job with PandaID=6668229764
[2025-06-05 02:11:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:42:29]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:42:29] 2025-06-05 10:42:09,759 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:42:29] 2025-06-05 10:42:09,760 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:42:29] 2025-06-05 10:42:09,760 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:42:29] 2025-06-05 10:42:09,766 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:42:29] 2025-06-05 10:42:09,767 | INFO     | sum of square deviations: 5835967553.221804
[2025-06-05 06:42:29] 2025-06-05 10:42:09,769 | INFO     | sum of deviations: 58300570187.76318
[2025-06-05 06:42:29] 2025-06-05 10:42:09,769 | INFO     | mean x: 1749112014.6654136
[2025-06-05 06:42:29] 2025-06-05 10:42:09,769 | INFO     | mean y: 2545052.289473684
[2025-06-05 06:42:29] 2025-06-05 10:42:09,769 | INFO     | -- intersect: -17470860487.9735
[2025-06-05 06:42:29] 2025-06-05 10:42:09,769 | INFO     | intersect: -17470860487.9735
[2025-06-05 06:42:29] 2025-06-05 10:42:09,770 | INFO     | chi2: 2.89596247288434
[2025-06-05 06:42:29] 2025-06-05 10:42:09,770 | INFO     | sum of square deviations: 5513026080.582371
[2025-06-05 06:42:29] 2025-06-05 10:42:09,772 | INFO     | sum of deviations: 75307406727.62837
[2025-06-05 06:42:29] 2025-06-05 10:42:09,772 | INFO     | mean x: 1749111862.1685824
[2025-06-05 06:42:29] 2025-06-05 10:42:09,772 | INFO     | mean y: 2552951.0766283525
[2025-06-05 06:42:29] 2025-06-05 10:42:09,773 | INFO     | -- intersect: -23890147081.739918
[2025-06-05 06:42:29] 2025-06-05 10:42:09,773 | INFO     | intersect: -23890147081.739918
[2025-06-05 06:42:29] 2025-06-05 10:42:09,773 | INFO     | chi2: 2.1152014838538884
[2025-06-05 06:42:29] 2025-06-05 10:42:09,773 | INFO     | current chi2=2.1152014838538884 (change=26.96032826187917 %)
[2025-06-05 06:42:29] 2025-06-05 10:42:09,774 | INFO     | sum of square deviations: 5202176603.433594
[2025-06-05 06:42:29] 2025-06-05 10:42:09,775 | INFO     | sum of deviations: 73663407355.6836
[2025-06-05 06:42:29] 2025-06-05 10:42:09,776 | INFO     | mean x: 1749111709.6601562
[2025-06-05 06:42:29] 2025-06-05 10:42:09,776 | INFO     | mean y: 2552144.41015625
[2025-06-05 06:42:29] 2025-06-05 10:42:09,776 | INFO     | -- intersect: -24765066912.24592
[2025-06-05 06:42:29] 2025-06-05 10:42:09,776 | INFO     | intersect: -24765066912.24592
[2025-06-05 06:42:29] 2025-06-05 10:42:09,776 | INFO     | chi2: 2.1155566765330356
[2025-06-05 06:42:29] 2025-06-05 10:42:09,777 | INFO     | current chi2=2.1155566765330356 (change=-0.016792380388275234 %)
[2025-06-05 06:42:29] 2025-06-05 10:42:09,777 | INFO     | right removable region: 255
[2025-06-05 06:42:29] 2025-06-05 10:42:09,777 | INFO     | sum of square deviations: 5512999240.582371
[2025-06-05 06:42:29] 2025-06-05 10:42:09,779 | INFO     | sum of deviations: -530885186.4406204
[2025-06-05 06:42:29] 2025-06-05 10:42:09,779 | INFO     | mean x: 1749112167.1685824
[2025-06-05 06:42:29] 2025-06-05 10:42:09,779 | INFO     | mean y: 2572697.214559387
[2025-06-05 06:42:29] 2025-06-05 10:42:09,779 | INFO     | -- intersect: 171006919.3957254
[2025-06-05 06:42:29] 2025-06-05 10:42:09,779 | INFO     | intersect: 171006919.3957254
[2025-06-05 06:42:29] 2025-06-05 10:42:09,780 | INFO     | chi2: 0.8877343579982324
[2025-06-05 06:42:29] 2025-06-05 10:42:09,780 | INFO     | current chi2=0.8877343579982324 (change=69.3457920705008 %)
[2025-06-05 06:42:29] 2025-06-05 10:42:09,781 | INFO     | sum of square deviations: 5202170690.4375
[2025-06-05 06:42:29] 2025-06-05 10:42:09,782 | INFO     | sum of deviations: -11834585912.5625
[2025-06-05 06:42:29] 2025-06-05 10:42:09,783 | INFO     | mean x: 1749112319.671875
[2025-06-05 06:42:29] 2025-06-05 10:42:09,783 | INFO     | mean y: 2578211.171875
[2025-06-05 06:42:29] 2025-06-05 10:42:09,783 | INFO     | -- intersect: 3981690249.1387467
[2025-06-05 06:42:29] 2025-06-05 10:42:09,783 | INFO     | intersect: 3981690249.1387467
[2025-06-05 06:42:29] 2025-06-05 10:42:09,783 | INFO     | chi2: 0.8057394348382456
[2025-06-05 06:42:29] 2025-06-05 10:42:09,784 | INFO     | current chi2=0.8057394348382456 (change=9.23642556145721 %)
[2025-06-05 06:42:29] 2025-06-05 10:42:09,784 | INFO     | left removable region: 20
[2025-06-05 06:42:29] 2025-06-05 10:42:09,784 | INFO     | sum of square deviations: 4024068044.4850826
[2025-06-05 06:42:29] 2025-06-05 10:42:09,786 | INFO     | sum of deviations: 2734459891.4893613
[2025-06-05 06:42:29] 2025-06-05 10:42:09,786 | INFO     | mean x: 1749112289.1531916
[2025-06-05 06:42:29] 2025-06-05 10:42:09,786 | INFO     | mean y: 2588471.6808510637
[2025-06-05 06:42:29] 2025-06-05 10:42:09,786 | INFO     | -- intersect: -1185979253.2002919
[2025-06-05 06:42:29] 2025-06-05 10:42:09,786 | INFO     | intersect: -1185979253.2002919
[2025-06-05 06:42:29] 2025-06-05 10:42:09,787 | INFO     | chi2: 0.0027161354082754067
[2025-06-05 06:42:29] 2025-06-05 10:42:09,787 | INFO     | -- intersect: -1185979253.2002919
[2025-06-05 06:42:29] 2025-06-05 10:42:09,787 | INFO     | current memory leak: 0.68 B/s (using 235 data points, chi2=0.00)
[2025-06-05 06:42:29] 2025-06-05 10:42:09,788 | INFO     | ..............................
[2025-06-05 06:42:29] 2025-06-05 10:42:09,788 | INFO     | . Timing measurements:
[2025-06-05 06:42:29] 2025-06-05 10:42:09,788 | INFO     | . get job = 0 s
[2025-06-05 06:42:29] 2025-06-05 10:42:09,788 | INFO     | . initial setup = 2 s
[2025-06-05 06:42:29] 2025-06-05 10:42:09,788 | INFO     | . payload setup = 12 s
[2025-06-05 06:42:29] 2025-06-05 10:42:09,788 | INFO     | . stage-in = 0 s
[2025-06-05 06:42:29] 2025-06-05 10:42:09,788 | INFO     | . payload execution = 16196 s
[2025-06-05 06:42:29] 2025-06-05 10:42:09,788 | INFO     | . stage-out = 2 s
[2025-06-05 06:42:29] 2025-06-05 10:42:09,789 | INFO     | . log creation = 0 s
[2025-06-05 06:42:29] 2025-06-05 10:42:09,789 | INFO     | ..............................
[2025-06-05 06:42:29] 2025-06-05 10:42:09,899 | INFO     | 
[2025-06-05 06:42:29] 2025-06-05 10:42:09,900 | INFO     | job summary report
[2025-06-05 06:42:29] 2025-06-05 10:42:09,900 | INFO     | --------------------------------------------------
[2025-06-05 06:42:29] 2025-06-05 10:42:09,900 | INFO     | PanDA job id: 6668229764
[2025-06-05 06:42:29] 2025-06-05 10:42:09,900 | INFO     | task id: 44871837
[2025-06-05 06:42:29] 2025-06-05 10:42:09,900 | INFO     | errors: (none)
[2025-06-05 06:42:29] 2025-06-05 10:42:09,900 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:42:29] 2025-06-05 10:42:09,900 | INFO     | pilot state: finished 
[2025-06-05 06:42:29] 2025-06-05 10:42:09,900 | INFO     | transexitcode: 0
[2025-06-05 06:42:29] 2025-06-05 10:42:09,900 | INFO     | exeerrorcode: 0
[2025-06-05 06:42:29] 2025-06-05 10:42:09,900 | INFO     | exeerrordiag: 
[2025-06-05 06:42:29] 2025-06-05 10:42:09,900 | INFO     | exitcode: 0
[2025-06-05 06:42:29] 2025-06-05 10:42:09,901 | INFO     | exitmsg: OK
[2025-06-05 06:42:29] 2025-06-05 10:42:09,901 | INFO     | cpuconsumptiontime: 65324 s
[2025-06-05 06:42:29] 2025-06-05 10:42:09,901 | INFO     | nevents: 400
[2025-06-05 06:42:29] 2025-06-05 10:42:09,901 | INFO     | neventsw: 0
[2025-06-05 06:42:29] 2025-06-05 10:42:09,901 | INFO     | pid: 19270
[2025-06-05 06:42:29] 2025-06-05 10:42:09,901 | INFO     | pgrp: 19270
[2025-06-05 06:42:29] 2025-06-05 10:42:09,901 | INFO     | corecount: 10
[2025-06-05 06:42:29] 2025-06-05 10:42:09,901 | INFO     | event service: False
[2025-06-05 06:42:29] 2025-06-05 10:42:09,901 | INFO     | sizes: {0: 2397171, 1: 2397370, 9: 2397576, 12: 2397604, 16212: 2429190, 16216: 2438131, 16217: 2438315, 16225: 2438485}
[2025-06-05 06:42:29] 2025-06-05 10:42:09,901 | INFO     | --------------------------------------------------
[2025-06-05 06:42:29] 2025-06-05 10:42:09,901 | INFO     | 
[2025-06-05 06:42:29] 2025-06-05 10:42:09,902 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 06:42:29] 2025-06-05 10:42:09,974 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,975 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,975 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:42:29] 2025-06-05 10:42:09,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:42:29] 2025-06-05 10:42:09,976 | INFO     | job 6668229764 has completed (purged errors)
[2025-06-05 06:42:29] 2025-06-05 10:42:09,977 | INFO     | overall cleanup function is called
[2025-06-05 06:42:29] 2025-06-05 10:42:11,010 | INFO     | --- collectZombieJob: --- 10, [19270]
[2025-06-05 06:42:29] 2025-06-05 10:42:11,011 | INFO     | zombie collector waiting for pid 19270
[2025-06-05 06:42:29] 2025-06-05 10:42:11,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:42:29] 2025-06-05 10:42:11,011 | INFO     | collected zombie processes
[2025-06-05 06:42:29] 2025-06-05 10:42:11,011 | INFO     | will attempt to kill all subprocesses of pid=19270
[2025-06-05 06:42:29] 2025-06-05 10:42:11,363 | INFO     | process IDs to be killed: [19270] (in reverse order)
[2025-06-05 06:42:29] 2025-06-05 10:42:11,578 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:42:29] 2025-06-05 10:42:11,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:42:29] 2025-06-05 10:42:11,589 | INFO     | did not find any defunct processes belonging to 19270
[2025-06-05 06:42:29] 2025-06-05 10:42:11,598 | INFO     | did not find any defunct processes belonging to 19270
[2025-06-05 06:42:29] 2025-06-05 10:42:11,599 | INFO     | ready for new job
[2025-06-05 06:42:29] 2025-06-05 10:42:11,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:42:29] 2025-06-05 10:42:11,601 | INFO     | **************************************
[2025-06-05 06:42:29] 2025-06-05 10:42:11,601 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:42:29] 2025-06-05 10:42:11,601 | INFO     | **************************************
[2025-06-05 06:42:29] 2025-06-05 10:42:11,601 | INFO     | 
[2025-06-05 06:42:29] 2025-06-05 10:42:11,604 | INFO     | architecture information:
[2025-06-05 06:42:29] 2025-06-05 10:42:11,604 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:42:29] 2025-06-05 10:42:11,754 | INFO     | cat /etc/os-release:
[2025-06-05 06:42:29] NAME="CentOS Linux"
[2025-06-05 06:42:29] VERSION="7 (Core)"
[2025-06-05 06:42:29] ID="centos"
[2025-06-05 06:42:29] ID_LIKE="rhel fedora"
[2025-06-05 06:42:29] VERSION_ID="7"
[2025-06-05 06:42:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:42:29] ANSI_COLOR="0;31"
[2025-06-05 06:42:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:42:29] HOME_URL="https://www.centos.org/"
[2025-06-05 06:42:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:42:29] 
[2025-06-05 06:42:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:42:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:42:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:42:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:42:29] 
[2025-06-05 06:42:29] 2025-06-05 10:42:11,754 | INFO     | **************************************
[2025-06-05 06:42:29] 2025-06-05 10:42:12,258 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 06:42:29] 2025-06-05 10:42:12,329 | INFO     | sufficient remaining disk space (56932433920 B)
[2025-06-05 06:42:29] 2025-06-05 10:42:12,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:42:29] 2025-06-05 10:42:12,330 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:42:29] 2025-06-05 10:42:12,330 | INFO     | update_server=False
[2025-06-05 06:42:29] 2025-06-05 10:42:12,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:42:29] 2025-06-05 10:42:12,330 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 06:42:29] 2025-06-05 10:42:12,330 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:42:29] 2025-06-05 10:42:12,331 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:42:29] 2025-06-05 10:42:12,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:42:29] 2025-06-05 10:42:12,344 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:42:29] 2025-06-05 10:42:12,440 | INFO     | all payload control threads have been joined
[2025-06-05 06:42:29] 2025-06-05 10:42:12,648 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 06:42:29] 2025-06-05 10:42:12,649 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 06:42:29] 2025-06-05 10:42:12,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:42:29] 2025-06-05 10:42:12,650 | INFO     | will abort loop
[2025-06-05 06:42:29] 2025-06-05 10:42:13,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:42:29] 2025-06-05 10:42:13,232 | INFO     | all job control threads have been joined
[2025-06-05 06:42:29] 2025-06-05 10:42:13,335 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:13,335 | INFO     | all data control threads have been joined
[2025-06-05 06:42:29] 2025-06-05 10:42:13,344 | INFO     | [job] validate thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:13,446 | INFO     | [payload] control thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:13,655 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:13,772 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:13,932 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:14,238 | INFO     | [job] control thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:14,338 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:14,340 | INFO     | [data] control thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:14,492 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:14,504 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:14,549 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:14,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:42:29] 2025-06-05 10:42:15,019 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:15,915 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:16,350 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:22,498 | INFO     | job.realtimelogging is not enabled
[2025-06-05 06:42:29] 2025-06-05 10:42:23,503 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:42:29] 2025-06-05 10:42:23,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080462653248)>', '<ExcThread(monitor, started 140079737591552)>']
[2025-06-05 06:42:29] 2025-06-05 10:42:24,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:42:29] 2025-06-05 10:42:24,379 | INFO     | [monitor] control thread has ended
[2025-06-05 06:42:29] 2025-06-05 10:42:28,876 | INFO     | all workflow threads have been joined
[2025-06-05 06:42:29] 2025-06-05 10:42:28,876 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:42:29] 2025-06-05 10:42:28,876 | INFO     | traces error code: 0
[2025-06-05 06:42:29] 2025-06-05 10:42:28,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:42:29] 2025-06-05 10:42:28,998 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:42:29] 2025-06-05 10:42:29,001 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:42:29] 2025-06-05 10:42:29,005 [wrapper] pilotpid: 3777
[2025-06-05 06:42:29] 2025-06-05 10:42:29,008 [wrapper] Pilot exit status: 0
[2025-06-05 06:42:29] 2025-06-05 10:42:29,022 [wrapper] pandaids: 6668229764 6668229764
[2025-06-05 06:42:29] 2025-06-05 10:42:29,100 [wrapper] cleanup supervisor_pilot 12025 3778
[2025-06-05 06:42:29] 2025-06-05 10:42:29,103 [wrapper] Test setup, not cleaning
[2025-06-05 06:42:29] 2025-06-05 10:42:29,107 [wrapper] apfmon messages muted
[2025-06-05 06:42:29] 2025-06-05 10:42:29,109 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:42:29] 2025-06-05 10:42:29,112 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:42:29]  *** Error codes and diagnostics ***
[2025-06-05 06:42:29]     "exeErrorCode": 0,
[2025-06-05 06:42:29]     "exeErrorDiag": "",
[2025-06-05 06:42:29]     "pilotErrorCode": 0,
[2025-06-05 06:42:29]     "pilotErrorDiag": "",
[2025-06-05 06:42:29]  *** Listing of results directory ***
[2025-06-05 06:42:29] total 634172
[2025-06-05 06:42:29] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-05 06:42:29] -rw-r--r-- 1 boincer umatlas    495897 May 28 03:05 pilot3.tar.gz
[2025-06-05 06:42:29] -rw-r--r-- 1 boincer umatlas      5111 May 28 03:11 queuedata.json
[2025-06-05 06:42:29] -rwx------ 1 boincer umatlas     37140 May 28 03:12 runpilot2-wrapper.sh
[2025-06-05 06:42:29] -rw-r--r-- 1 boincer umatlas       100 Jun  4 19:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:42:29] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 19:46 run_atlas
[2025-06-05 06:42:29] -rw-r--r-- 1 boincer umatlas       105 Jun  4 19:46 job.xml
[2025-06-05 06:42:29] -rw-r--r-- 3 boincer umatlas 223454013 Jun  4 19:46 EVNT.44871834._001651.pool.root.1
[2025-06-05 06:42:29] -rw-r--r-- 3 boincer umatlas 223454013 Jun  4 19:46 ATLAS.root_0
[2025-06-05 06:42:29] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:46 start_atlas.sh
[2025-06-05 06:42:29] drwxrwx--x 2 boincer umatlas      4096 Jun  4 19:46 shared
[2025-06-05 06:42:29] -rw-r--r-- 2 boincer umatlas    508888 Jun  4 19:46 input.tar.gz
[2025-06-05 06:42:29] -rw-r--r-- 1 boincer umatlas         0 Jun  4 19:46 boinc_lockfile
[2025-06-05 06:42:29] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 02:11 pandaJob.out
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas    987109 Jun  5 02:11 agis_schedconf.cvmfs.json
[2025-06-05 06:42:29] -rw-r--r-- 1 boincer umatlas      6229 Jun  5 06:39 init_data.xml
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas 194936649 Jun  5 06:41 HITS.44871837._080522.pool.root.1
[2025-06-05 06:42:29] -rw-r--r-- 1 boincer umatlas       532 Jun  5 06:41 boinc_task_state.xml
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas      1060 Jun  5 06:41 memory_monitor_summary.json
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas   1598969 Jun  5 06:41 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas    458138 Jun  5 06:41 log.44871837._080522.job.log.tgz.1
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas        96 Jun  5 06:42 pilot_heartbeat.json
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas      7753 Jun  5 06:42 heartbeat.json
[2025-06-05 06:42:29] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 06:42 boinc_mmap_file
[2025-06-05 06:42:29] -rw-r--r-- 1 boincer umatlas        29 Jun  5 06:42 wrapper_checkpoint.txt
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas      4734 Jun  5 06:42 pilotlog.txt
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas   1393156 Jun  5 06:42 log.44871837._080522.job.log.1
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas       357 Jun  5 06:42 output.list
[2025-06-05 06:42:29] -rw-r--r-- 1 boincer umatlas       620 Jun  5 06:42 runtime_log
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas   1873920 Jun  5 06:42 result.tar.gz
[2025-06-05 06:42:29] -rw-r--r-- 1 boincer umatlas      8742 Jun  5 06:42 runtime_log.err
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas       787 Jun  5 06:42 6DNNDmJ9Pe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJWbKDmTAReHn.diag
[2025-06-05 06:42:29] -rw-r--r-- 1 boincer umatlas     23041 Jun  5 06:42 stderr.txt
[2025-06-05 06:42:29] HITS file was successfully produced:
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas 194936649 Jun  5 06:41 shared/HITS.pool.root.1
[2025-06-05 06:42:29]  *** Contents of shared directory: ***
[2025-06-05 06:42:29] total 410944
[2025-06-05 06:42:29] -rw-r--r-- 3 boincer umatlas 223454013 Jun  4 19:46 ATLAS.root_0
[2025-06-05 06:42:29] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:46 start_atlas.sh
[2025-06-05 06:42:29] -rw-r--r-- 2 boincer umatlas    508888 Jun  4 19:46 input.tar.gz
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas 194936649 Jun  5 06:41 HITS.pool.root.1
[2025-06-05 06:42:29] -rw------- 1 boincer umatlas   1873920 Jun  5 06:42 result.tar.gz
06:42:30 (35520): run_atlas exited; CPU time 65778.754326
06:42:30 (35520): called boinc_finish(0)

</stderr_txt>
]]>

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