Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:46:02 (87265): wrapper (7.7.26015): starting
19:46:02 (87265): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 19:46:02] Arguments: --nthreads 9
[2025-06-04 19:46:02] Threads: 9
[2025-06-04 19:46:02] Checking for CVMFS
[2025-06-04 19:46:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:46:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:46:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:46:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:46:05] 2.11.2.0 5563 29461 264836 146798 3 66 15279844 18432000 10728 130560 0 70962075 99.458 73287113 29361 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 19:46:05] CVMFS is ok
[2025-06-04 19:46:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:46:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:46:05] Further information can be found at the LHC@home message board.
[2025-06-04 19:46:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:46:05] Checking for apptainer binary...
[2025-06-04 19:46:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:46:05] Running /usr/bin/apptainer --version
[2025-06-04 19:46:05] apptainer version 1.3.2-1.el7
[2025-06-04 19:46:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:46:12] c-210-35-2.aglt2.org
[2025-06-04 19:46:12] apptainer works
[2025-06-04 19:46:12] Set ATHENA_PROC_NUMBER=9
[2025-06-04 19:46:12] Set ATHENA_CORE_NUMBER=9
[2025-06-04 19:46:12] Starting ATLAS job with PandaID=6680194951
[2025-06-04 19:46:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:18:16]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:18:16] 2025-06-05 03:17:51,111 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:18:16] 2025-06-05 03:17:53,615 | INFO     | monitor loop #909: job 0:6680194951 is in state 'finished'
[2025-06-04 23:18:16] 2025-06-05 03:17:53,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:18:16] 2025-06-05 03:17:56,124 | INFO     | monitor loop #910: job 0:6680194951 is in state 'finished'
[2025-06-04 23:18:16] 2025-06-05 03:17:56,124 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:18:16] 2025-06-05 03:17:56,634 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 23:18:16] 2025-06-05 03:17:56,635 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6680194951/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:18:16] 2025-06-05 03:17:56,636 | INFO     | extracted standard info from prmon json
[2025-06-04 23:18:16] 2025-06-05 03:17:56,636 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:18:16] 2025-06-05 03:17:56,636 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:18:16] 2025-06-05 03:17:56,636 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:18:16] 2025-06-05 03:17:56,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:18:16] 2025-06-05 03:17:56,640 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:18:16] 2025-06-05 03:17:56,641 | INFO     | sum of square deviations: 2632414538.6274595
[2025-06-04 23:18:16] 2025-06-05 03:17:56,642 | INFO     | sum of deviations: 59253836527.411736
[2025-06-04 23:18:16] 2025-06-05 03:17:56,642 | INFO     | mean x: 1749087229.72549
[2025-06-04 23:18:16] 2025-06-05 03:17:56,642 | INFO     | mean y: 2453561.382352941
[2025-06-04 23:18:16] 2025-06-05 03:17:56,642 | INFO     | -- intersect: -39368294191.885864
[2025-06-04 23:18:16] 2025-06-05 03:17:56,642 | INFO     | intersect: -39368294191.885864
[2025-06-04 23:18:16] 2025-06-05 03:17:56,643 | INFO     | chi2: 4.526283828174046
[2025-06-04 23:18:16] 2025-06-05 03:17:56,643 | INFO     | sum of square deviations: 2443569213.366821
[2025-06-04 23:18:16] 2025-06-05 03:17:56,644 | INFO     | sum of deviations: 70889738244.79395
[2025-06-04 23:18:16] 2025-06-05 03:17:56,644 | INFO     | mean x: 1749087077.2311559
[2025-06-04 23:18:16] 2025-06-05 03:17:56,645 | INFO     | mean y: 2462737.67839196
[2025-06-04 23:18:16] 2025-06-05 03:17:56,645 | INFO     | -- intersect: -50739838480.55807
[2025-06-04 23:18:16] 2025-06-05 03:17:56,645 | INFO     | intersect: -50739838480.55807
[2025-06-04 23:18:16] 2025-06-05 03:17:56,645 | INFO     | chi2: 3.7794533236967744
[2025-06-04 23:18:16] 2025-06-05 03:17:56,645 | INFO     | current chi2=3.7794533236967744 (change=16.49986021266703 %)
[2025-06-04 23:18:16] 2025-06-05 03:17:56,645 | INFO     | right removable region: 198
[2025-06-04 23:18:16] 2025-06-05 03:17:56,646 | INFO     | sum of square deviations: 2443541153.366821
[2025-06-04 23:18:16] 2025-06-05 03:17:56,647 | INFO     | sum of deviations: -1966944879.437191
[2025-06-04 23:18:16] 2025-06-05 03:17:56,647 | INFO     | mean x: 1749087382.2311559
[2025-06-04 23:18:16] 2025-06-05 03:17:56,647 | INFO     | mean y: 2502873.6834170856
[2025-06-04 23:18:16] 2025-06-05 03:17:56,647 | INFO     | -- intersect: 1410442521.2017298
[2025-06-04 23:18:16] 2025-06-05 03:17:56,647 | INFO     | intersect: 1410442521.2017298
[2025-06-04 23:18:16] 2025-06-05 03:17:56,647 | INFO     | chi2: 1.01518079452569
[2025-06-04 23:18:16] 2025-06-05 03:17:56,647 | INFO     | current chi2=1.01518079452569 (change=77.57142872467135 %)
[2025-06-04 23:18:16] 2025-06-05 03:17:56,648 | INFO     | sum of square deviations: 2263923755.5927987
[2025-06-04 23:18:16] 2025-06-05 03:17:56,649 | INFO     | sum of deviations: -15622329462.623713
[2025-06-04 23:18:16] 2025-06-05 03:17:56,649 | INFO     | mean x: 1749087534.7371135
[2025-06-04 23:18:16] 2025-06-05 03:17:56,649 | INFO     | mean y: 2514410.850515464
[2025-06-04 23:18:16] 2025-06-05 03:17:56,649 | INFO     | -- intersect: 12072188426.650839
[2025-06-04 23:18:16] 2025-06-05 03:17:56,649 | INFO     | intersect: 12072188426.650839
[2025-06-04 23:18:16] 2025-06-05 03:17:56,650 | INFO     | chi2: 0.8276471850052327
[2025-06-04 23:18:16] 2025-06-05 03:17:56,650 | INFO     | current chi2=0.8276471850052327 (change=18.472927239337338 %)
[2025-06-04 23:18:16] 2025-06-05 03:17:56,650 | INFO     | left removable region: 20
[2025-06-04 23:18:16] 2025-06-05 03:17:56,650 | INFO     | sum of square deviations: 1748684631.123592
[2025-06-04 23:18:16] 2025-06-05 03:17:56,651 | INFO     | sum of deviations: -1686491280.224718
[2025-06-04 23:18:16] 2025-06-05 03:17:56,651 | INFO     | mean x: 1749087656.752809
[2025-06-04 23:18:16] 2025-06-05 03:17:56,651 | INFO     | mean y: 2524451.949438202
[2025-06-04 23:18:16] 2025-06-05 03:17:56,651 | INFO     | -- intersect: 1689404423.8783574
[2025-06-04 23:18:16] 2025-06-05 03:17:56,651 | INFO     | intersect: 1689404423.8783574
[2025-06-04 23:18:16] 2025-06-05 03:17:56,652 | INFO     | chi2: 0.013567299881758393
[2025-06-04 23:18:16] 2025-06-05 03:17:56,652 | INFO     | -- intersect: 1689404423.8783574
[2025-06-04 23:18:16] 2025-06-05 03:17:56,652 | INFO     | current memory leak: -0.96 B/s (using 178 data points, chi2=0.01)
[2025-06-04 23:18:16] 2025-06-05 03:17:56,653 | INFO     | ..............................
[2025-06-04 23:18:16] 2025-06-05 03:17:56,653 | INFO     | . Timing measurements:
[2025-06-04 23:18:16] 2025-06-05 03:17:56,653 | INFO     | . get job = 0 s
[2025-06-04 23:18:16] 2025-06-05 03:17:56,653 | INFO     | . initial setup = 5 s
[2025-06-04 23:18:16] 2025-06-05 03:17:56,653 | INFO     | . payload setup = 86 s
[2025-06-04 23:18:16] 2025-06-05 03:17:56,653 | INFO     | . stage-in = 0 s
[2025-06-04 23:18:16] 2025-06-05 03:17:56,653 | INFO     | . payload execution = 12447 s
[2025-06-04 23:18:16] 2025-06-05 03:17:56,653 | INFO     | . stage-out = 4 s
[2025-06-04 23:18:16] 2025-06-05 03:17:56,653 | INFO     | . log creation = 0 s
[2025-06-04 23:18:16] 2025-06-05 03:17:56,653 | INFO     | ..............................
[2025-06-04 23:18:16] 2025-06-05 03:17:56,751 | INFO     | 
[2025-06-04 23:18:16] 2025-06-05 03:17:56,751 | INFO     | job summary report
[2025-06-04 23:18:16] 2025-06-05 03:17:56,751 | INFO     | --------------------------------------------------
[2025-06-04 23:18:16] 2025-06-05 03:17:56,751 | INFO     | PanDA job id: 6680194951
[2025-06-04 23:18:16] 2025-06-05 03:17:56,751 | INFO     | task id: 45006595
[2025-06-04 23:18:16] 2025-06-05 03:17:56,751 | INFO     | errors: (none)
[2025-06-04 23:18:16] 2025-06-05 03:17:56,751 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:18:16] 2025-06-05 03:17:56,751 | INFO     | pilot state: finished 
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | transexitcode: 0
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | exeerrorcode: 0
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | exeerrordiag: 
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | exitcode: 0
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | exitmsg: OK
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | cpuconsumptiontime: 37467 s
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | nevents: 400
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | neventsw: 0
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | pid: 110439
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | pgrp: 110439
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | corecount: 9
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | event service: False
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | sizes: {0: 2397291, 1: 2397291, 12: 2397319, 22: 2397347, 25: 2397581, 33: 2397609, 12538: 2427456, 12539: 2427455, 12545: 2436452, 12546: 2436508, 12582: 2436678}
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | --------------------------------------------------
[2025-06-04 23:18:16] 2025-06-05 03:17:56,752 | INFO     | 
[2025-06-04 23:18:16] 2025-06-05 03:17:56,753 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 23:18:16] 2025-06-05 03:17:57,096 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,116 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:18:16] 2025-06-05 03:17:57,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,116 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:18:16] 2025-06-05 03:17:57,116 | INFO     | job 6680194951 has completed (purged errors)
[2025-06-04 23:18:16] 2025-06-05 03:17:57,116 | INFO     | overall cleanup function is called
[2025-06-04 23:18:16] 2025-06-05 03:17:58,144 | INFO     | --- collectZombieJob: --- 10, [110439]
[2025-06-04 23:18:16] 2025-06-05 03:17:58,144 | INFO     | zombie collector waiting for pid 110439
[2025-06-04 23:18:16] 2025-06-05 03:17:58,144 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:18:16] 2025-06-05 03:17:58,144 | INFO     | collected zombie processes
[2025-06-04 23:18:16] 2025-06-05 03:17:58,144 | INFO     | will attempt to kill all subprocesses of pid=110439
[2025-06-04 23:18:16] 2025-06-05 03:17:58,758 | INFO     | PID=93507 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 23:18:16] 2025-06-05 03:17:58,758 | INFO     | .. there are 8 such processes running
[2025-06-04 23:18:16] 2025-06-05 03:17:58,848 | INFO     | process IDs to be killed: [110439] (in reverse order)
[2025-06-04 23:18:16] 2025-06-05 03:17:58,947 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:18:16] 2025-06-05 03:17:58,948 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:18:16] 2025-06-05 03:17:58,956 | INFO     | did not find any defunct processes belonging to 110439
[2025-06-04 23:18:16] 2025-06-05 03:17:58,963 | INFO     | did not find any defunct processes belonging to 110439
[2025-06-04 23:18:16] 2025-06-05 03:17:58,963 | INFO     | ready for new job
[2025-06-04 23:18:16] 2025-06-05 03:17:58,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:18:16] 2025-06-05 03:17:58,965 | INFO     | **************************************
[2025-06-04 23:18:16] 2025-06-05 03:17:58,965 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:18:16] 2025-06-05 03:17:58,966 | INFO     | **************************************
[2025-06-04 23:18:16] 2025-06-05 03:17:58,966 | INFO     | 
[2025-06-04 23:18:16] 2025-06-05 03:17:58,969 | INFO     | architecture information:
[2025-06-04 23:18:16] 2025-06-05 03:17:58,970 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:18:16] 2025-06-05 03:17:59,158 | INFO     | cat /etc/os-release:
[2025-06-04 23:18:16] NAME="CentOS Linux"
[2025-06-04 23:18:16] VERSION="7 (Core)"
[2025-06-04 23:18:16] ID="centos"
[2025-06-04 23:18:16] ID_LIKE="rhel fedora"
[2025-06-04 23:18:16] VERSION_ID="7"
[2025-06-04 23:18:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:18:16] ANSI_COLOR="0;31"
[2025-06-04 23:18:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:18:16] HOME_URL="https://www.centos.org/"
[2025-06-04 23:18:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:18:16] 
[2025-06-04 23:18:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:18:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:18:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:18:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:18:16] 
[2025-06-04 23:18:16] 2025-06-05 03:17:59,158 | INFO     | **************************************
[2025-06-04 23:18:16] 2025-06-05 03:17:59,662 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 23:18:16] 2025-06-05 03:17:59,760 | INFO     | 12655s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 23:18:16] 2025-06-05 03:17:59,922 | INFO     | sufficient remaining disk space (57396953088 B)
[2025-06-04 23:18:16] 2025-06-05 03:17:59,923 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:18:16] 2025-06-05 03:17:59,923 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:18:16] 2025-06-05 03:17:59,923 | INFO     | update_server=False
[2025-06-04 23:18:16] 2025-06-05 03:17:59,923 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:18:16] 2025-06-05 03:17:59,936 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:18:16] 2025-06-05 03:17:59,936 | INFO     | aborting loop
[2025-06-04 23:18:16] 2025-06-05 03:18:00,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:18:16] 2025-06-05 03:18:00,313 | INFO     | all data control threads have been joined
[2025-06-04 23:18:16] 2025-06-05 03:18:00,766 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:18:16] 2025-06-05 03:18:00,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:18:16] 2025-06-05 03:18:00,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:18:16] 2025-06-05 03:18:00,905 | INFO     | all payload control threads have been joined
[2025-06-04 23:18:16] 2025-06-05 03:18:00,929 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:00,942 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:01,176 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:01,319 | INFO     | [data] control thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:01,511 | INFO     | all job control threads have been joined
[2025-06-04 23:18:16] 2025-06-05 03:18:01,562 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:01,562 | INFO     | [job] validate thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:01,657 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:01,774 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:18:16] 2025-06-05 03:18:01,874 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:01,911 | INFO     | [payload] control thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:02,140 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:02,150 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:02,154 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:02,191 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:02,516 | INFO     | [job] control thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:02,780 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:03,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:18:16] 2025-06-05 03:18:07,164 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:18:16] 2025-06-05 03:18:08,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139959449364288)>', '<ExcThread(monitor, started 139958975174400)>']
[2025-06-04 23:18:16] 2025-06-05 03:18:08,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:18:16] 2025-06-05 03:18:08,812 | INFO     | [monitor] control thread has ended
[2025-06-04 23:18:16] 2025-06-05 03:18:13,128 | INFO     | all workflow threads have been joined
[2025-06-04 23:18:16] 2025-06-05 03:18:13,128 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:18:16] 2025-06-05 03:18:13,128 | INFO     | traces error code: 0
[2025-06-04 23:18:16] 2025-06-05 03:18:13,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:18:16] 2025-06-05 03:18:14,643 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:18:16] 2025-06-05 03:18:14,651 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:18:16] 2025-06-05 03:18:14,654 [wrapper] pilotpid: 93507
[2025-06-04 23:18:16] 2025-06-05 03:18:14,660 [wrapper] Pilot exit status: 0
[2025-06-04 23:18:16] 2025-06-05 03:18:14,746 [wrapper] pandaids: 6680194951
[2025-06-04 23:18:16] 2025-06-05 03:18:15,693 [wrapper] cleanup supervisor_pilot 106860 93508
[2025-06-04 23:18:16] 2025-06-05 03:18:15,714 [wrapper] Test setup, not cleaning
[2025-06-04 23:18:16] 2025-06-05 03:18:15,724 [wrapper] apfmon messages muted
[2025-06-04 23:18:16] 2025-06-05 03:18:15,734 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:18:16] 2025-06-05 03:18:15,737 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:18:16]  *** Error codes and diagnostics ***
[2025-06-04 23:18:16]     "exeErrorCode": 0,
[2025-06-04 23:18:16]     "exeErrorDiag": "",
[2025-06-04 23:18:16]     "pilotErrorCode": 0,
[2025-06-04 23:18:16]     "pilotErrorDiag": "",
[2025-06-04 23:18:16]  *** Listing of results directory ***
[2025-06-04 23:18:16] total 391344
[2025-06-04 23:18:16] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 19:03 pilot3.tar.gz
[2025-06-04 23:18:16] -rwx------ 1 boincer umatlas     37140 Jun  4 19:45 runpilot2-wrapper.sh
[2025-06-04 23:18:16] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 19:45 queuedata.json
[2025-06-04 23:18:16] -rw-r--r-- 1 boincer umatlas       100 Jun  4 19:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:18:16] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 19:46 run_atlas
[2025-06-04 23:18:16] -rw-r--r-- 1 boincer umatlas       105 Jun  4 19:46 job.xml
[2025-06-04 23:18:16] -rw-r--r-- 2 boincer umatlas 215977160 Jun  4 19:46 EVNT.45006593._001958.pool.root.1
[2025-06-04 23:18:16] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:46 start_atlas.sh
[2025-06-04 23:18:16] drwxrwx--x 2 boincer umatlas      4096 Jun  4 19:46 shared
[2025-06-04 23:18:16] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 19:46 input.tar.gz
[2025-06-04 23:18:16] -rw-r--r-- 1 boincer umatlas         0 Jun  4 19:46 boinc_lockfile
[2025-06-04 23:18:16] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 19:46 pandaJob.out
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas    987117 Jun  4 19:47 agis_schedconf.cvmfs.json
[2025-06-04 23:18:16] drwx------ 4 boincer umatlas      4096 Jun  4 19:47 pilot3
[2025-06-04 23:18:16] -rw-r--r-- 1 boincer umatlas      6267 Jun  4 23:11 init_data.xml
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas 177870331 Jun  4 23:16 HITS.45006595._056988.pool.root.1
[2025-06-04 23:18:16] -rw-r--r-- 1 boincer umatlas       530 Jun  4 23:16 boinc_task_state.xml
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas        95 Jun  4 23:17 pilot_heartbeat.json
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas      1052 Jun  4 23:17 memory_monitor_summary.json
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas   1598969 Jun  4 23:17 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas    407347 Jun  4 23:17 log.45006595._056988.job.log.tgz.1
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas      7749 Jun  4 23:17 heartbeat.json
[2025-06-04 23:18:16] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 23:18 boinc_mmap_file
[2025-06-04 23:18:16] -rw-r--r-- 1 boincer umatlas        28 Jun  4 23:18 wrapper_checkpoint.txt
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas      4469 Jun  4 23:18 pilotlog.txt
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas   1121421 Jun  4 23:18 log.45006595._056988.job.log.1
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas       357 Jun  4 23:18 output.list
[2025-06-04 23:18:16] -rw-r--r-- 1 boincer umatlas       620 Jun  4 23:18 runtime_log
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas   1546240 Jun  4 23:18 result.tar.gz
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas       663 Jun  4 23:18 voUKDmWyCh7n9Rq4apOajLDm4fhM0noT9bVof3QYDmY4aKDmFFKz9n.diag
[2025-06-04 23:18:16] -rw-r--r-- 1 boincer umatlas      8670 Jun  4 23:18 runtime_log.err
[2025-06-04 23:18:16] -rw-r--r-- 1 boincer umatlas     21276 Jun  4 23:18 stderr.txt
[2025-06-04 23:18:16] HITS file was successfully produced:
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas 177870331 Jun  4 23:16 shared/HITS.pool.root.1
[2025-06-04 23:18:16]  *** Contents of shared directory: ***
[2025-06-04 23:18:16] total 386656
[2025-06-04 23:18:16] -rw-r--r-- 2 boincer umatlas 215977160 Jun  4 19:46 ATLAS.root_0
[2025-06-04 23:18:16] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:46 start_atlas.sh
[2025-06-04 23:18:16] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 19:46 input.tar.gz
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas 177870331 Jun  4 23:16 HITS.pool.root.1
[2025-06-04 23:18:16] -rw------- 1 boincer umatlas   1546240 Jun  4 23:18 result.tar.gz
23:18:18 (87265): run_atlas exited; CPU time 37660.252035
23:18:18 (87265): called boinc_finish(0)

</stderr_txt>
]]>

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