Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:45:22 (17921): wrapper (7.7.26015): starting
19:45:22 (17921): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 19:45:22] Arguments: --nthreads 8
[2025-06-04 19:45:22] Threads: 8
[2025-06-04 19:45:22] Checking for CVMFS
[2025-06-04 19:45:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:45:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:45:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:45:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:45:22] 2.11.2.0 2861 19324 97152 146798 2 1 12384362 20275201 1 130560 0 8707465 99.957 4105260 5004 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 19:45:22] CVMFS is ok
[2025-06-04 19:45:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:45:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:45:22] Further information can be found at the LHC@home message board.
[2025-06-04 19:45:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:45:22] Checking for apptainer binary...
[2025-06-04 19:45:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:45:22] Running /usr/bin/apptainer --version
[2025-06-04 19:45:22] apptainer version 1.3.2-1.el7
[2025-06-04 19:45:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:45:24] c-204-18.aglt2.org
[2025-06-04 19:45:24] apptainer works
[2025-06-04 19:45:24] Set ATHENA_PROC_NUMBER=8
[2025-06-04 19:45:24] Set ATHENA_CORE_NUMBER=8
[2025-06-04 19:45:24] Starting ATLAS job with PandaID=6667365908
[2025-06-04 19:45:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:27:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:27:52] 2025-06-05 02:27:31,595 | INFO     | monitor loop #714: job 0:6667365908 is in state 'finished'
[2025-06-04 22:27:52] 2025-06-05 02:27:31,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:27:52] 2025-06-05 02:27:34,098 | INFO     | monitor loop #715: job 0:6667365908 is in state 'finished'
[2025-06-04 22:27:52] 2025-06-05 02:27:34,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:27:52] 2025-06-05 02:27:36,607 | INFO     | monitor loop #716: job 0:6667365908 is in state 'finished'
[2025-06-04 22:27:52] 2025-06-05 02:27:36,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:27:52] 2025-06-05 02:27:36,932 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 22:27:52] 2025-06-05 02:27:36,932 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667365908/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:27:52] 2025-06-05 02:27:36,933 | INFO     | extracted standard info from prmon json
[2025-06-04 22:27:52] 2025-06-05 02:27:36,934 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 22:27:52] 2025-06-05 02:27:36,934 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:27:52] 2025-06-05 02:27:36,934 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:27:52] 2025-06-05 02:27:36,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:27:52] 2025-06-05 02:27:36,938 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:27:52] 2025-06-05 02:27:36,939 | INFO     | sum of square deviations: 1246386160.0
[2025-06-04 22:27:52] 2025-06-05 02:27:36,939 | INFO     | sum of deviations: 2975472883.999991
[2025-06-04 22:27:52] 2025-06-05 02:27:36,940 | INFO     | mean x: 1749085595.0
[2025-06-04 22:27:52] 2025-06-05 02:27:36,940 | INFO     | mean y: 2515832.5911949687
[2025-06-04 22:27:52] 2025-06-05 02:27:36,940 | INFO     | -- intersect: -4173041411.8165016
[2025-06-04 22:27:52] 2025-06-05 02:27:36,940 | INFO     | intersect: -4173041411.8165016
[2025-06-04 22:27:52] 2025-06-05 02:27:36,941 | INFO     | chi2: 1.6397079864694222
[2025-06-04 22:27:52] 2025-06-05 02:27:36,941 | INFO     | sum of square deviations: 1132458442.5
[2025-06-04 22:27:52] 2025-06-05 02:27:36,942 | INFO     | sum of deviations: 2818354909.5000005
[2025-06-04 22:27:52] 2025-06-05 02:27:36,942 | INFO     | mean x: 1749085442.5
[2025-06-04 22:27:52] 2025-06-05 02:27:36,942 | INFO     | mean y: 2515622.214285714
[2025-06-04 22:27:52] 2025-06-05 02:27:36,942 | INFO     | -- intersect: -4350441942.499931
[2025-06-04 22:27:52] 2025-06-05 02:27:36,942 | INFO     | intersect: -4350441942.499931
[2025-06-04 22:27:52] 2025-06-05 02:27:36,943 | INFO     | chi2: 1.6400778751689464
[2025-06-04 22:27:52] 2025-06-05 02:27:36,943 | INFO     | current chi2=1.6400778751689464 (change=-0.022558205642499295 %)
[2025-06-04 22:27:52] 2025-06-05 02:27:36,943 | INFO     | right removable region: 153
[2025-06-04 22:27:52] 2025-06-05 02:27:36,944 | INFO     | sum of square deviations: 1132458442.5
[2025-06-04 22:27:52] 2025-06-05 02:27:36,944 | INFO     | sum of deviations: -21306380089.500015
[2025-06-04 22:27:52] 2025-06-05 02:27:36,945 | INFO     | mean x: 1749085747.5
[2025-06-04 22:27:52] 2025-06-05 02:27:36,945 | INFO     | mean y: 2547862.162337662
[2025-06-04 22:27:52] 2025-06-05 02:27:36,945 | INFO     | -- intersect: 32910321204.460724
[2025-06-04 22:27:52] 2025-06-05 02:27:36,945 | INFO     | intersect: 32910321204.460724
[2025-06-04 22:27:52] 2025-06-05 02:27:36,945 | INFO     | chi2: 0.13920453134050068
[2025-06-04 22:27:52] 2025-06-05 02:27:36,945 | INFO     | current chi2=0.13920453134050068 (change=91.51040718901223 %)
[2025-06-04 22:27:52] 2025-06-05 02:27:36,946 | INFO     | sum of square deviations: 1025693650.0
[2025-06-04 22:27:52] 2025-06-05 02:27:36,946 | INFO     | sum of deviations: -18875735567.99999
[2025-06-04 22:27:52] 2025-06-05 02:27:36,947 | INFO     | mean x: 1749085900.0
[2025-06-04 22:27:52] 2025-06-05 02:27:36,947 | INFO     | mean y: 2544331.255033557
[2025-06-04 22:27:52] 2025-06-05 02:27:36,947 | INFO     | -- intersect: 32190793653.18198
[2025-06-04 22:27:52] 2025-06-05 02:27:36,947 | INFO     | intersect: 32190793653.18198
[2025-06-04 22:27:52] 2025-06-05 02:27:36,947 | INFO     | chi2: 0.12873198019117138
[2025-06-04 22:27:52] 2025-06-05 02:27:36,947 | INFO     | current chi2=0.12873198019117138 (change=7.523139547600613 %)
[2025-06-04 22:27:52] 2025-06-05 02:27:36,948 | INFO     | left removable region: 20
[2025-06-04 22:27:52] 2025-06-05 02:27:36,948 | INFO     | sum of square deviations: 729472282.0
[2025-06-04 22:27:52] 2025-06-05 02:27:36,948 | INFO     | sum of deviations: -8759186359.000004
[2025-06-04 22:27:52] 2025-06-05 02:27:36,949 | INFO     | mean x: 1749086022.0
[2025-06-04 22:27:52] 2025-06-05 02:27:36,949 | INFO     | mean y: 2528812.4436090225
[2025-06-04 22:27:52] 2025-06-05 02:27:36,949 | INFO     | -- intersect: 21004794152.28003
[2025-06-04 22:27:52] 2025-06-05 02:27:36,949 | INFO     | intersect: 21004794152.28003
[2025-06-04 22:27:52] 2025-06-05 02:27:36,949 | INFO     | chi2: 0.08953322556718123
[2025-06-04 22:27:52] 2025-06-05 02:27:36,949 | INFO     | -- intersect: 21004794152.28003
[2025-06-04 22:27:52] 2025-06-05 02:27:36,950 | INFO     | current memory leak: -12.01 B/s (using 133 data points, chi2=0.09)
[2025-06-04 22:27:52] 2025-06-05 02:27:36,950 | INFO     | ..............................
[2025-06-04 22:27:52] 2025-06-05 02:27:36,950 | INFO     | . Timing measurements:
[2025-06-04 22:27:52] 2025-06-05 02:27:36,950 | INFO     | . get job = 0 s
[2025-06-04 22:27:52] 2025-06-05 02:27:36,950 | INFO     | . initial setup = 3 s
[2025-06-04 22:27:52] 2025-06-05 02:27:36,950 | INFO     | . payload setup = 11 s
[2025-06-04 22:27:52] 2025-06-05 02:27:36,951 | INFO     | . stage-in = 0 s
[2025-06-04 22:27:52] 2025-06-05 02:27:36,951 | INFO     | . payload execution = 9675 s
[2025-06-04 22:27:52] 2025-06-05 02:27:36,951 | INFO     | . stage-out = 0 s
[2025-06-04 22:27:52] 2025-06-05 02:27:36,951 | INFO     | . log creation = 0 s
[2025-06-04 22:27:52] 2025-06-05 02:27:36,951 | INFO     | ..............................
[2025-06-04 22:27:52] 2025-06-05 02:27:37,043 | INFO     | 
[2025-06-04 22:27:52] 2025-06-05 02:27:37,043 | INFO     | job summary report
[2025-06-04 22:27:52] 2025-06-05 02:27:37,043 | INFO     | --------------------------------------------------
[2025-06-04 22:27:52] 2025-06-05 02:27:37,043 | INFO     | PanDA job id: 6667365908
[2025-06-04 22:27:52] 2025-06-05 02:27:37,044 | INFO     | task id: 44871837
[2025-06-04 22:27:52] 2025-06-05 02:27:37,044 | INFO     | errors: (none)
[2025-06-04 22:27:52] 2025-06-05 02:27:37,044 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:27:52] 2025-06-05 02:27:37,044 | INFO     | pilot state: finished 
[2025-06-04 22:27:52] 2025-06-05 02:27:37,044 | INFO     | transexitcode: 0
[2025-06-04 22:27:52] 2025-06-05 02:27:37,044 | INFO     | exeerrorcode: 0
[2025-06-04 22:27:52] 2025-06-05 02:27:37,045 | INFO     | exeerrordiag: 
[2025-06-04 22:27:52] 2025-06-05 02:27:37,045 | INFO     | exitcode: 0
[2025-06-04 22:27:52] 2025-06-05 02:27:37,045 | INFO     | exitmsg: OK
[2025-06-04 22:27:52] 2025-06-05 02:27:37,045 | INFO     | cpuconsumptiontime: 71933 s
[2025-06-04 22:27:52] 2025-06-05 02:27:37,045 | INFO     | nevents: 400
[2025-06-04 22:27:52] 2025-06-05 02:27:37,045 | INFO     | neventsw: 0
[2025-06-04 22:27:52] 2025-06-05 02:27:37,045 | INFO     | pid: 28343
[2025-06-04 22:27:52] 2025-06-05 02:27:37,046 | INFO     | pgrp: 28343
[2025-06-04 22:27:52] 2025-06-05 02:27:37,046 | INFO     | corecount: 8
[2025-06-04 22:27:52] 2025-06-05 02:27:37,046 | INFO     | event service: False
[2025-06-04 22:27:52] 2025-06-05 02:27:37,046 | INFO     | sizes: {0: 2396564, 1: 2397420, 7: 2397626, 12: 2397654, 9690: 2425916, 9691: 2425915, 9692: 2435096, 9698: 2435210}
[2025-06-04 22:27:52] 2025-06-05 02:27:37,046 | INFO     | --------------------------------------------------
[2025-06-04 22:27:52] 2025-06-05 02:27:37,046 | INFO     | 
[2025-06-04 22:27:52] 2025-06-05 02:27:37,047 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 22:27:52] 2025-06-05 02:27:37,074 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,075 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,075 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,075 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,076 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,076 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,076 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,077 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,077 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,077 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,077 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,077 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,077 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,078 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:27:52] 2025-06-05 02:27:37,078 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,078 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:27:52] 2025-06-05 02:27:37,078 | INFO     | job 6667365908 has completed (purged errors)
[2025-06-04 22:27:52] 2025-06-05 02:27:37,079 | INFO     | overall cleanup function is called
[2025-06-04 22:27:52] 2025-06-05 02:27:38,087 | INFO     | --- collectZombieJob: --- 10, [28343]
[2025-06-04 22:27:52] 2025-06-05 02:27:38,087 | INFO     | zombie collector waiting for pid 28343
[2025-06-04 22:27:52] 2025-06-05 02:27:38,087 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:27:52] 2025-06-05 02:27:38,088 | INFO     | collected zombie processes
[2025-06-04 22:27:52] 2025-06-05 02:27:38,088 | INFO     | will attempt to kill all subprocesses of pid=28343
[2025-06-04 22:27:52] 2025-06-05 02:27:38,178 | INFO     | process IDs to be killed: [28343] (in reverse order)
[2025-06-04 22:27:52] 2025-06-05 02:27:38,234 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:27:52] 2025-06-05 02:27:38,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:27:52] 2025-06-05 02:27:38,238 | INFO     | did not find any defunct processes belonging to 28343
[2025-06-04 22:27:52] 2025-06-05 02:27:38,240 | INFO     | did not find any defunct processes belonging to 28343
[2025-06-04 22:27:52] 2025-06-05 02:27:38,241 | INFO     | ready for new job
[2025-06-04 22:27:52] 2025-06-05 02:27:38,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:27:52] 2025-06-05 02:27:38,242 | INFO     | **************************************
[2025-06-04 22:27:52] 2025-06-05 02:27:38,242 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:27:52] 2025-06-05 02:27:38,243 | INFO     | **************************************
[2025-06-04 22:27:52] 2025-06-05 02:27:38,243 | INFO     | 
[2025-06-04 22:27:52] 2025-06-05 02:27:38,243 | INFO     | architecture information:
[2025-06-04 22:27:52] 2025-06-05 02:27:38,244 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:27:52] 2025-06-05 02:27:38,261 | INFO     | cat /etc/os-release:
[2025-06-04 22:27:52] NAME="CentOS Linux"
[2025-06-04 22:27:52] VERSION="7 (Core)"
[2025-06-04 22:27:52] ID="centos"
[2025-06-04 22:27:52] ID_LIKE="rhel fedora"
[2025-06-04 22:27:52] VERSION_ID="7"
[2025-06-04 22:27:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:27:52] ANSI_COLOR="0;31"
[2025-06-04 22:27:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:27:52] HOME_URL="https://www.centos.org/"
[2025-06-04 22:27:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:27:52] 
[2025-06-04 22:27:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:27:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:27:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:27:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:27:52] 
[2025-06-04 22:27:52] 2025-06-05 02:27:38,261 | INFO     | **************************************
[2025-06-04 22:27:52] 2025-06-05 02:27:38,764 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 22:27:52] 2025-06-05 02:27:38,785 | INFO     | sufficient remaining disk space (18567135232 B)
[2025-06-04 22:27:52] 2025-06-05 02:27:38,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:27:52] 2025-06-05 02:27:38,785 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:27:52] 2025-06-05 02:27:38,786 | INFO     | update_server=False
[2025-06-04 22:27:52] 2025-06-05 02:27:38,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:27:52] 2025-06-05 02:27:38,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:27:52] 2025-06-05 02:27:38,861 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:27:52] 2025-06-05 02:27:39,032 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:27:52] 2025-06-05 02:27:39,033 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:27:52] 2025-06-05 02:27:39,033 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:27:52] 2025-06-05 02:27:39,110 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 22:27:52] 2025-06-05 02:27:39,111 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 22:27:52] 2025-06-05 02:27:39,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:27:52] 2025-06-05 02:27:39,122 | INFO     | will abort loop
[2025-06-04 22:27:52] 2025-06-05 02:27:39,189 | INFO     | all data control threads have been joined
[2025-06-04 22:27:52] 2025-06-05 02:27:39,254 | INFO     | all job control threads have been joined
[2025-06-04 22:27:52] 2025-06-05 02:27:39,789 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:39,789 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:39,902 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:39,914 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:40,127 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:40,131 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:40,155 | INFO     | all payload control threads have been joined
[2025-06-04 22:27:52] 2025-06-05 02:27:40,195 | INFO     | [data] control thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:40,255 | INFO     | [job] control thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:40,455 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:40,627 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:40,665 | INFO     | [job] validate thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:40,867 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:40,911 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:41,160 | INFO     | [payload] control thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:41,200 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:41,446 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:27:52] 2025-06-05 02:27:45,450 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:27:52] 2025-06-05 02:27:47,327 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140204872484672)>', '<ExcThread(monitor, started 140203696056064)>']
[2025-06-04 22:27:52] 2025-06-05 02:27:48,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:27:52] 2025-06-05 02:27:48,070 | INFO     | [monitor] control thread has ended
[2025-06-04 22:27:52] 2025-06-05 02:27:52,339 | INFO     | all workflow threads have been joined
[2025-06-04 22:27:52] 2025-06-05 02:27:52,339 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:27:52] 2025-06-05 02:27:52,339 | INFO     | traces error code: 0
[2025-06-04 22:27:52] 2025-06-05 02:27:52,342 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:27:52] 2025-06-05 02:27:52,460 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:27:52] 2025-06-05 02:27:52,465 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:27:52] 2025-06-05 02:27:52,470 [wrapper] pilotpid: 21589
[2025-06-04 22:27:52] 2025-06-05 02:27:52,475 [wrapper] Pilot exit status: 0
[2025-06-04 22:27:52] 2025-06-05 02:27:52,494 [wrapper] pandaids: 6667365908
[2025-06-04 22:27:52] 2025-06-05 02:27:52,542 [wrapper] cleanup supervisor_pilot 23032 21590
[2025-06-04 22:27:52] 2025-06-05 02:27:52,548 [wrapper] Test setup, not cleaning
[2025-06-04 22:27:52] 2025-06-05 02:27:52,553 [wrapper] apfmon messages muted
[2025-06-04 22:27:52] 2025-06-05 02:27:52,558 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:27:52] 2025-06-05 02:27:52,562 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:27:52]  *** Error codes and diagnostics ***
[2025-06-04 22:27:52]     "exeErrorCode": 0,
[2025-06-04 22:27:52]     "exeErrorDiag": "",
[2025-06-04 22:27:52]     "pilotErrorCode": 0,
[2025-06-04 22:27:52]     "pilotErrorDiag": "",
[2025-06-04 22:27:52]  *** Listing of results directory ***
[2025-06-04 22:27:52] total 419320
[2025-06-04 22:27:52] -rw-r--r-- 1 boincer umatlas      5111 May 27 13:43 queuedata.json
[2025-06-04 22:27:52] -rw-r--r-- 1 boincer umatlas    495897 May 27 13:43 pilot3.tar.gz
[2025-06-04 22:27:52] -rwx------ 1 boincer umatlas     37140 May 27 13:44 runpilot2-wrapper.sh
[2025-06-04 22:27:52] -rw-r--r-- 1 boincer umatlas       100 Jun  4 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:27:52] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 19:45 run_atlas
[2025-06-04 22:27:52] -rw-r--r-- 1 boincer umatlas       105 Jun  4 19:45 job.xml
[2025-06-04 22:27:52] -rw-r--r-- 2 boincer umatlas 226759995 Jun  4 19:45 EVNT.44871834._002793.pool.root.1
[2025-06-04 22:27:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:45 start_atlas.sh
[2025-06-04 22:27:52] drwxrwx--x 2 boincer umatlas      4096 Jun  4 19:45 shared
[2025-06-04 22:27:52] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 19:45 input.tar.gz
[2025-06-04 22:27:52] -rw-r--r-- 1 boincer umatlas         0 Jun  4 19:45 boinc_lockfile
[2025-06-04 22:27:52] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 19:45 pandaJob.out
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas    987117 Jun  4 19:45 agis_schedconf.cvmfs.json
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas   1598969 Jun  4 19:45 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:27:52] drwx------ 4 boincer umatlas      4096 Jun  4 19:45 pilot3
[2025-06-04 22:27:52] -rw-r--r-- 1 boincer umatlas      5905 Jun  4 22:18 init_data.xml
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas 196339423 Jun  4 22:26 HITS.44871837._071107.pool.root.1
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas        95 Jun  4 22:26 pilot_heartbeat.json
[2025-06-04 22:27:52] -rw-r--r-- 1 boincer umatlas       529 Jun  4 22:27 boinc_task_state.xml
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas      1049 Jun  4 22:27 memory_monitor_summary.json
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas    355811 Jun  4 22:27 log.44871837._071107.job.log.tgz.1
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas      7745 Jun  4 22:27 heartbeat.json
[2025-06-04 22:27:52] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 22:27 boinc_mmap_file
[2025-06-04 22:27:52] -rw-r--r-- 1 boincer umatlas        27 Jun  4 22:27 wrapper_checkpoint.txt
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas      4539 Jun  4 22:27 pilotlog.txt
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas    873754 Jun  4 22:27 log.44871837._071107.job.log.1
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas       357 Jun  4 22:27 output.list
[2025-06-04 22:27:52] -rw-r--r-- 1 boincer umatlas       620 Jun  4 22:27 runtime_log
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas   1249280 Jun  4 22:27 result.tar.gz
[2025-06-04 22:27:52] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 22:27 runtime_log.err
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas       661 Jun  4 22:27 625LDmRWDe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmp0ZKDmFszqEo.diag
[2025-06-04 22:27:52] -rw-r--r-- 1 boincer umatlas     21052 Jun  4 22:27 stderr.txt
[2025-06-04 22:27:52] HITS file was successfully produced:
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas 196339423 Jun  4 22:26 shared/HITS.pool.root.1
[2025-06-04 22:27:52]  *** Contents of shared directory: ***
[2025-06-04 22:27:52] total 414924
[2025-06-04 22:27:52] -rw-r--r-- 2 boincer umatlas 226759995 Jun  4 19:45 ATLAS.root_0
[2025-06-04 22:27:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:45 start_atlas.sh
[2025-06-04 22:27:52] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 19:45 input.tar.gz
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas 196339423 Jun  4 22:26 HITS.pool.root.1
[2025-06-04 22:27:52] -rw------- 1 boincer umatlas   1249280 Jun  4 22:27 result.tar.gz
22:27:54 (17921): run_atlas exited; CPU time 71879.582617
22:27:54 (17921): called boinc_finish(0)

</stderr_txt>
]]>

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