Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:37:21 (3630): wrapper (7.7.26015): starting
19:37:21 (3630): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 19:37:21] Arguments: --nthreads 12
[2025-06-04 19:37:21] Threads: 12
[2025-06-04 19:37:21] Checking for CVMFS
[2025-06-04 19:37:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:37:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:37:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:37:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:37:21] 2.11.2.0 2979 36351 95220 146798 3 1 19309455 20275200 1 130560 0 16198834 99.983 6272127 7587 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 19:37:21] CVMFS is ok
[2025-06-04 19:37:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:37:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:37:21] Further information can be found at the LHC@home message board.
[2025-06-04 19:37:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:37:21] Checking for apptainer binary...
[2025-06-04 19:37:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:37:21] Running /usr/bin/apptainer --version
[2025-06-04 19:37:21] apptainer version 1.3.2-1.el7
[2025-06-04 19:37:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:37:23] c-205-7.aglt2.org
[2025-06-04 19:37:23] apptainer works
[2025-06-04 19:37:23] Set ATHENA_PROC_NUMBER=12
[2025-06-04 19:37:23] Set ATHENA_CORE_NUMBER=12
[2025-06-04 19:37:23] Starting ATLAS job with PandaID=6667365888
[2025-06-04 19:37:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:12:48]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:12:48]  is_tar=False
[2025-06-04 21:12:48]  lfn=log.44871837._071087.job.log.tgz.1
[2025-06-04 21:12:48]  mtime=0
[2025-06-04 21:12:48]  protocol_id=None
[2025-06-04 21:12:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 21:12:48]  replicas=None
[2025-06-04 21:12:48]  scope=mc23_13p6TeV
[2025-06-04 21:12:48]  status=None
[2025-06-04 21:12:48]  status_code=0
[2025-06-04 21:12:48]  storage_token=
[2025-06-04 21:12:48]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667365888/log.44871837._071087.job.log.tgz.1
[2025-06-04 21:12:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/61/log.44871837._071087.job.log.tgz.1
[2025-06-04 21:12:48]  workdir=None
[2025-06-04 21:12:48] ]
[2025-06-04 21:12:48] 2025-06-05 01:12:19,564 | INFO     | transferring file log.44871837._071087.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667365888/log.44871837._071087.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 21:12:48] 2025-06-05 01:12:19,564 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667365888/log.44871837._071087.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._071087.job
[2025-06-04 21:12:48] 2025-06-05 01:12:19,588 | INFO     | adding to output.list: log.44871837._071087.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/61/log.44871837._071087.job.log.tg
[2025-06-04 21:12:48] 2025-06-05 01:12:19,589 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 21:12:48] 2025-06-05 01:12:19,589 | INFO     | summary of transferred files:
[2025-06-04 21:12:48] 2025-06-05 01:12:19,589 | INFO     |  -- lfn=log.44871837._071087.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 21:12:48] 2025-06-05 01:12:19,589 | INFO     | stage-out finished correctly
[2025-06-04 21:12:48] 2025-06-05 01:12:20,418 | WARNING  | process 14560 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 21:12:48] 2025-06-05 01:12:20,418 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667365888/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:12:48] 2025-06-05 01:12:20,508 | INFO     | number of running child processes to parent process 14560: 1
[2025-06-04 21:12:48] 2025-06-05 01:12:20,508 | INFO     | maximum number of monitored processes: 6
[2025-06-04 21:12:48] 2025-06-05 01:12:21,805 | INFO     | PID=8110 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 21:12:48] 2025-06-05 01:12:22,174 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 21:12:48] 2025-06-05 01:12:22,785 | INFO     | job 6667365888 has state=finished
[2025-06-04 21:12:48] 2025-06-05 01:12:22,785 | INFO     | preparing for final server update for job 6667365888 in state='finished'
[2025-06-04 21:12:48] 2025-06-05 01:12:22,794 | INFO     | this job has now completed (state=finished)
[2025-06-04 21:12:48] 2025-06-05 01:12:22,794 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 21:12:48] 2025-06-05 01:12:22,794 | INFO     | log transfer has been attempted: DONE
[2025-06-04 21:12:48] 2025-06-05 01:12:22,795 | INFO     | job 6667365888 has finished - writing final server update
[2025-06-04 21:12:48] 2025-06-05 01:12:22,795 | INFO     | total number of processed events: 400 (read)
[2025-06-04 21:12:48] 2025-06-05 01:12:22,796 | INFO     | executing command: lscpu
[2025-06-04 21:12:48] 2025-06-05 01:12:22,822 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 21:12:48] 2025-06-05 01:12:23,011 | INFO     | monitor loop #424: job 0:6667365888 is in state 'finished'
[2025-06-04 21:12:48] 2025-06-05 01:12:23,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:12:48] 2025-06-05 01:12:25,514 | INFO     | monitor loop #425: job 0:6667365888 is in state 'finished'
[2025-06-04 21:12:48] 2025-06-05 01:12:25,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:12:48] 2025-06-05 01:12:27,418 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 21:12:48] 2025-06-05 01:12:27,419 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667365888/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:12:48] 2025-06-05 01:12:27,420 | INFO     | extracted standard info from prmon json
[2025-06-04 21:12:48] 2025-06-05 01:12:27,420 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:12:48] 2025-06-05 01:12:27,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:12:48] 2025-06-05 01:12:27,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:12:48] 2025-06-05 01:12:27,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:12:48] 2025-06-05 01:12:27,424 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:12:48] 2025-06-05 01:12:27,424 | INFO     | sum of square deviations: 197203697.5
[2025-06-04 21:12:48] 2025-06-05 01:12:27,425 | INFO     | sum of deviations: -11797377369.0
[2025-06-04 21:12:48] 2025-06-05 01:12:27,425 | INFO     | mean x: 1749083186.5
[2025-06-04 21:12:48] 2025-06-05 01:12:27,425 | INFO     | mean y: 2783537.2558139535
[2025-06-04 21:12:48] 2025-06-05 01:12:27,425 | INFO     | -- intersect: 104638724254.91656
[2025-06-04 21:12:48] 2025-06-05 01:12:27,425 | INFO     | intersect: 104638724254.91656
[2025-06-04 21:12:48] 2025-06-05 01:12:27,426 | INFO     | chi2: 0.10458369292541993
[2025-06-04 21:12:48] 2025-06-05 01:12:27,426 | INFO     | -- intersect: 104638724254.91656
[2025-06-04 21:12:48] 2025-06-05 01:12:27,426 | INFO     | current memory leak: -59.82 B/s (using 86 data points, chi2=0.10)
[2025-06-04 21:12:48] 2025-06-05 01:12:27,427 | INFO     | ..............................
[2025-06-04 21:12:48] 2025-06-05 01:12:27,427 | INFO     | . Timing measurements:
[2025-06-04 21:12:48] 2025-06-05 01:12:27,427 | INFO     | . get job = 0 s
[2025-06-04 21:12:48] 2025-06-05 01:12:27,427 | INFO     | . initial setup = 2 s
[2025-06-04 21:12:48] 2025-06-05 01:12:27,427 | INFO     | . payload setup = 9 s
[2025-06-04 21:12:48] 2025-06-05 01:12:27,427 | INFO     | . stage-in = 0 s
[2025-06-04 21:12:48] 2025-06-05 01:12:27,427 | INFO     | . payload execution = 5650 s
[2025-06-04 21:12:48] 2025-06-05 01:12:27,427 | INFO     | . stage-out = 0 s
[2025-06-04 21:12:48] 2025-06-05 01:12:27,427 | INFO     | . log creation = 0 s
[2025-06-04 21:12:48] 2025-06-05 01:12:27,428 | INFO     | ..............................
[2025-06-04 21:12:48] 2025-06-05 01:12:27,512 | INFO     | 
[2025-06-04 21:12:48] 2025-06-05 01:12:27,512 | INFO     | job summary report
[2025-06-04 21:12:48] 2025-06-05 01:12:27,512 | INFO     | --------------------------------------------------
[2025-06-04 21:12:48] 2025-06-05 01:12:27,512 | INFO     | PanDA job id: 6667365888
[2025-06-04 21:12:48] 2025-06-05 01:12:27,513 | INFO     | task id: 44871837
[2025-06-04 21:12:48] 2025-06-05 01:12:27,513 | INFO     | errors: (none)
[2025-06-04 21:12:48] 2025-06-05 01:12:27,513 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:12:48] 2025-06-05 01:12:27,513 | INFO     | pilot state: finished 
[2025-06-04 21:12:48] 2025-06-05 01:12:27,513 | INFO     | transexitcode: 0
[2025-06-04 21:12:48] 2025-06-05 01:12:27,513 | INFO     | exeerrorcode: 0
[2025-06-04 21:12:48] 2025-06-05 01:12:27,514 | INFO     | exeerrordiag: 
[2025-06-04 21:12:48] 2025-06-05 01:12:27,514 | INFO     | exitcode: 0
[2025-06-04 21:12:48] 2025-06-05 01:12:27,514 | INFO     | exitmsg: OK
[2025-06-04 21:12:48] 2025-06-05 01:12:27,514 | INFO     | cpuconsumptiontime: 59615 s
[2025-06-04 21:12:48] 2025-06-05 01:12:27,514 | INFO     | nevents: 400
[2025-06-04 21:12:48] 2025-06-05 01:12:27,514 | INFO     | neventsw: 0
[2025-06-04 21:12:48] 2025-06-05 01:12:27,514 | INFO     | pid: 14560
[2025-06-04 21:12:48] 2025-06-05 01:12:27,515 | INFO     | pgrp: 14560
[2025-06-04 21:12:48] 2025-06-05 01:12:27,515 | INFO     | corecount: 12
[2025-06-04 21:12:48] 2025-06-05 01:12:27,515 | INFO     | event service: False
[2025-06-04 21:12:48] 2025-06-05 01:12:27,515 | INFO     | sizes: {0: 2397392, 1: 2397392, 5: 2397626, 11: 2397682, 5664: 2424181, 5666: 2433122, 5668: 2433306, 5674: 2433476}
[2025-06-04 21:12:48] 2025-06-05 01:12:27,515 | INFO     | --------------------------------------------------
[2025-06-04 21:12:48] 2025-06-05 01:12:27,516 | INFO     | 
[2025-06-04 21:12:48] 2025-06-05 01:12:27,516 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 21:12:48] 2025-06-05 01:12:27,539 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,539 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,540 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,540 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,541 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,541 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,541 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,541 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,541 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,542 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:12:48] 2025-06-05 01:12:27,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,543 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:12:48] 2025-06-05 01:12:27,543 | INFO     | job 6667365888 has completed (purged errors)
[2025-06-04 21:12:48] 2025-06-05 01:12:27,543 | INFO     | overall cleanup function is called
[2025-06-04 21:12:48] 2025-06-05 01:12:28,548 | INFO     | --- collectZombieJob: --- 10, [14560]
[2025-06-04 21:12:48] 2025-06-05 01:12:28,548 | INFO     | zombie collector waiting for pid 14560
[2025-06-04 21:12:48] 2025-06-05 01:12:28,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:12:48] 2025-06-05 01:12:28,548 | INFO     | collected zombie processes
[2025-06-04 21:12:48] 2025-06-05 01:12:28,549 | INFO     | will attempt to kill all subprocesses of pid=14560
[2025-06-04 21:12:48] 2025-06-05 01:12:28,640 | INFO     | process IDs to be killed: [14560] (in reverse order)
[2025-06-04 21:12:48] 2025-06-05 01:12:28,689 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:12:48] 2025-06-05 01:12:28,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:12:48] 2025-06-05 01:12:28,692 | INFO     | did not find any defunct processes belonging to 14560
[2025-06-04 21:12:48] 2025-06-05 01:12:28,695 | INFO     | did not find any defunct processes belonging to 14560
[2025-06-04 21:12:48] 2025-06-05 01:12:28,695 | INFO     | ready for new job
[2025-06-04 21:12:48] 2025-06-05 01:12:28,695 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:12:48] 2025-06-05 01:12:28,696 | INFO     | **************************************
[2025-06-04 21:12:48] 2025-06-05 01:12:28,696 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:12:48] 2025-06-05 01:12:28,697 | INFO     | **************************************
[2025-06-04 21:12:48] 2025-06-05 01:12:28,697 | INFO     | 
[2025-06-04 21:12:48] 2025-06-05 01:12:28,697 | INFO     | architecture information:
[2025-06-04 21:12:48] 2025-06-05 01:12:28,698 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:12:48] 2025-06-05 01:12:28,714 | INFO     | cat /etc/os-release:
[2025-06-04 21:12:48] NAME="CentOS Linux"
[2025-06-04 21:12:48] VERSION="7 (Core)"
[2025-06-04 21:12:48] ID="centos"
[2025-06-04 21:12:48] ID_LIKE="rhel fedora"
[2025-06-04 21:12:48] VERSION_ID="7"
[2025-06-04 21:12:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:12:48] ANSI_COLOR="0;31"
[2025-06-04 21:12:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:12:48] HOME_URL="https://www.centos.org/"
[2025-06-04 21:12:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:12:48] 
[2025-06-04 21:12:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:12:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:12:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:12:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:12:48] 
[2025-06-04 21:12:48] 2025-06-05 01:12:28,714 | INFO     | **************************************
[2025-06-04 21:12:48] 2025-06-05 01:12:29,217 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 21:12:48] 2025-06-05 01:12:29,234 | INFO     | sufficient remaining disk space (29390536704 B)
[2025-06-04 21:12:48] 2025-06-05 01:12:29,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:12:48] 2025-06-05 01:12:29,234 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:12:48] 2025-06-05 01:12:29,234 | INFO     | update_server=False
[2025-06-04 21:12:48] 2025-06-05 01:12:29,234 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:12:48] 2025-06-05 01:12:29,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:12:48] 2025-06-05 01:12:29,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:12:48] 2025-06-05 01:12:29,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:12:48] 2025-06-05 01:12:29,236 | INFO     | aborting loop
[2025-06-04 21:12:48] 2025-06-05 01:12:29,825 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:12:48] 2025-06-05 01:12:29,825 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:12:48] 2025-06-05 01:12:29,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:12:48] 2025-06-05 01:12:29,998 | INFO     | all data control threads have been joined
[2025-06-04 21:12:48] 2025-06-05 01:12:30,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:12:48] 2025-06-05 01:12:30,240 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:30,241 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:30,242 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:30,308 | INFO     | all job control threads have been joined
[2025-06-04 21:12:48] 2025-06-05 01:12:30,564 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:30,670 | INFO     | all payload control threads have been joined
[2025-06-04 21:12:48] 2025-06-05 01:12:30,826 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:31,004 | INFO     | [data] control thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:31,022 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:31,313 | INFO     | [job] control thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:31,317 | INFO     | [job] validate thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:31,662 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:31,676 | INFO     | [payload] control thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:31,724 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:31,734 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:32,199 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:33,241 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:40,223 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:12:48] 2025-06-05 01:12:41,228 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:12:48] 2025-06-05 01:12:43,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140557662385984)>', '<ExcThread(monitor, started 140557074548480)>']
[2025-06-04 21:12:48] 2025-06-05 01:12:43,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:12:48] 2025-06-05 01:12:43,893 | INFO     | [monitor] control thread has ended
[2025-06-04 21:12:48] 2025-06-05 01:12:48,299 | INFO     | all workflow threads have been joined
[2025-06-04 21:12:48] 2025-06-05 01:12:48,299 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:12:48] 2025-06-05 01:12:48,300 | INFO     | traces error code: 0
[2025-06-04 21:12:48] 2025-06-05 01:12:48,300 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:12:48] 2025-06-05 01:12:48,387 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:12:48] 2025-06-05 01:12:48,390 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:12:48] 2025-06-05 01:12:48,394 [wrapper] pilotpid: 8110
[2025-06-04 21:12:48] 2025-06-05 01:12:48,398 [wrapper] Pilot exit status: 0
[2025-06-04 21:12:48] 2025-06-05 01:12:48,412 [wrapper] pandaids: 6667365888
[2025-06-04 21:12:48] 2025-06-05 01:12:48,451 [wrapper] cleanup supervisor_pilot  1790 8111
[2025-06-04 21:12:48] 2025-06-05 01:12:48,454 [wrapper] Test setup, not cleaning
[2025-06-04 21:12:48] 2025-06-05 01:12:48,458 [wrapper] apfmon messages muted
[2025-06-04 21:12:48] 2025-06-05 01:12:48,462 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:12:48] 2025-06-05 01:12:48,466 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:12:48]  *** Error codes and diagnostics ***
[2025-06-04 21:12:48]     "exeErrorCode": 0,
[2025-06-04 21:12:48]     "exeErrorDiag": "",
[2025-06-04 21:12:48]     "pilotErrorCode": 0,
[2025-06-04 21:12:48]     "pilotErrorDiag": "",
[2025-06-04 21:12:48]  *** Listing of results directory ***
[2025-06-04 21:12:48] total 413788
[2025-06-04 21:12:48] -rw-r--r-- 1 boincer umatlas    495897 May 27 12:39 pilot3.tar.gz
[2025-06-04 21:12:48] -rw-r--r-- 1 boincer umatlas      5111 May 27 13:35 queuedata.json
[2025-06-04 21:12:48] -rwx------ 1 boincer umatlas     37140 May 27 13:39 runpilot2-wrapper.sh
[2025-06-04 21:12:48] -rw-r--r-- 1 boincer umatlas       100 Jun  4 19:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:12:48] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 19:37 run_atlas
[2025-06-04 21:12:48] -rw-r--r-- 1 boincer umatlas       105 Jun  4 19:37 job.xml
[2025-06-04 21:12:48] -rw-r--r-- 2 boincer umatlas 222229201 Jun  4 19:37 EVNT.44871834._002792.pool.root.1
[2025-06-04 21:12:48] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:37 start_atlas.sh
[2025-06-04 21:12:48] drwxrwx--x 2 boincer umatlas      4096 Jun  4 19:37 shared
[2025-06-04 21:12:48] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 19:37 input.tar.gz
[2025-06-04 21:12:48] -rw-r--r-- 1 boincer umatlas         0 Jun  4 19:37 boinc_lockfile
[2025-06-04 21:12:48] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 19:37 pandaJob.out
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas    987117 Jun  4 19:37 agis_schedconf.cvmfs.json
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas   1598969 Jun  4 19:37 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:12:48] drwx------ 4 boincer umatlas      4096 Jun  4 19:37 pilot3
[2025-06-04 21:12:48] -rw-r--r-- 1 boincer umatlas      5867 Jun  4 21:10 init_data.xml
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas 195827701 Jun  4 21:11 HITS.44871837._071087.pool.root.1
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas        95 Jun  4 21:11 pilot_heartbeat.json
[2025-06-04 21:12:48] -rw-r--r-- 1 boincer umatlas       529 Jun  4 21:12 boinc_task_state.xml
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas      1045 Jun  4 21:12 memory_monitor_summary.json
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas    384110 Jun  4 21:12 log.44871837._071087.job.log.tgz.1
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas      7754 Jun  4 21:12 heartbeat.json
[2025-06-04 21:12:48] -rw-r--r-- 1 boincer umatlas        27 Jun  4 21:12 wrapper_checkpoint.txt
[2025-06-04 21:12:48] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 21:12 boinc_mmap_file
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas      4425 Jun  4 21:12 pilotlog.txt
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas    532493 Jun  4 21:12 log.44871837._071087.job.log.1
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas       357 Jun  4 21:12 output.list
[2025-06-04 21:12:48] -rw-r--r-- 1 boincer umatlas       620 Jun  4 21:12 runtime_log
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas    931840 Jun  4 21:12 result.tar.gz
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas       658 Jun  4 21:12 uReMDmWSDe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmm0ZKDm20d59m.diag
[2025-06-04 21:12:48] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 21:12 runtime_log.err
[2025-06-04 21:12:48] -rw-r--r-- 1 boincer umatlas     21558 Jun  4 21:12 stderr.txt
[2025-06-04 21:12:48] HITS file was successfully produced:
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas 195827701 Jun  4 21:11 shared/HITS.pool.root.1
[2025-06-04 21:12:48]  *** Contents of shared directory: ***
[2025-06-04 21:12:48] total 409696
[2025-06-04 21:12:48] -rw-r--r-- 2 boincer umatlas 222229201 Jun  4 19:37 ATLAS.root_0
[2025-06-04 21:12:48] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:37 start_atlas.sh
[2025-06-04 21:12:48] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 19:37 input.tar.gz
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas 195827701 Jun  4 21:11 HITS.pool.root.1
[2025-06-04 21:12:48] -rw------- 1 boincer umatlas    931840 Jun  4 21:12 result.tar.gz
21:12:50 (3630): run_atlas exited; CPU time 59603.442937
21:12:50 (3630): called boinc_finish(0)

</stderr_txt>
]]>

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