Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:46:00 (2817246): wrapper (7.7.26015): starting
06:46:00 (2817246): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 06:46:00] Arguments: --nthreads 12
[2025-06-05 06:46:00] Threads: 12
[2025-06-05 06:46:00] Checking for CVMFS
[2025-06-05 06:46:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:46:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:46:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:46:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:46:00] 2.12.7.0 28267 2987 81688 146809 1 59 3746116 4096001 1002 130560 0 7764315 99.997 711989 160 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 06:46:00] CVMFS is ok
[2025-06-05 06:46:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 06:46:01] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 06:46:01] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 06:46:01] Further information can be found at the LHC@home message board.
[2025-06-05 06:46:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:46:01] Checking for apptainer binary...
[2025-06-05 06:46:01] apptainer is not installed, using version from CVMFS
[2025-06-05 06:46:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:46:01] ryzen7
[2025-06-05 06:46:01] apptainer works
[2025-06-05 06:46:01] Set ATHENA_PROC_NUMBER=12
[2025-06-05 06:46:01] Set ATHENA_CORE_NUMBER=12
[2025-06-05 06:46:01] Starting ATLAS job with PandaID=6668687865
[2025-06-05 06:46:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:12:21]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:12:21] 2025-06-05 08:11:25,604 | INFO     | PID=2820920 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 08:12:21] 2025-06-05 08:11:25,604 | INFO     | .. there are 2 such processes running
[2025-06-05 08:12:21] 2025-06-05 08:11:26,517 | INFO     | monitor loop #381: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:26,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:11:29,018 | INFO     | monitor loop #382: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:29,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:11:31,521 | INFO     | monitor loop #383: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:31,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:11:34,022 | INFO     | monitor loop #384: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:34,022 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:11:36,525 | INFO     | monitor loop #385: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:36,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:11:39,027 | INFO     | monitor loop #386: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:39,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:11:41,532 | INFO     | monitor loop #387: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:41,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:11:44,034 | INFO     | monitor loop #388: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:44,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:11:46,537 | INFO     | monitor loop #389: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:46,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:11:47,730 | INFO     | PID=2820920 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 08:12:21] 2025-06-05 08:11:47,730 | INFO     | .. there are 2 such processes running
[2025-06-05 08:12:21] 2025-06-05 08:11:49,038 | INFO     | monitor loop #390: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:49,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:11:51,541 | INFO     | monitor loop #391: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:51,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:11:54,042 | INFO     | monitor loop #392: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:54,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:11:56,545 | INFO     | monitor loop #393: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:56,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:11:59,046 | INFO     | monitor loop #394: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:11:59,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:12:01,549 | INFO     | monitor loop #395: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:12:01,549 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:12:04,050 | INFO     | monitor loop #396: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:12:04,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:12:06,550 | INFO     | monitor loop #397: job 0:6668687865 is in state 'finished'
[2025-06-05 08:12:21] 2025-06-05 08:12:06,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:21] 2025-06-05 08:12:08,741 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 08:12:21] 2025-06-05 08:12:08,741 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/4/PanDA_Pilot-6668687865/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:12:21] 2025-06-05 08:12:08,741 | INFO     | extracted standard info from prmon json
[2025-06-05 08:12:21] 2025-06-05 08:12:08,741 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:12:21] 2025-06-05 08:12:08,742 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:12:21] 2025-06-05 08:12:08,742 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:12:21] 2025-06-05 08:12:08,742 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:12:21] 2025-06-05 08:12:08,743 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:12:21] 2025-06-05 08:12:08,743 | INFO     | sum of square deviations: 141539398.0
[2025-06-05 08:12:21] 2025-06-05 08:12:08,743 | INFO     | sum of deviations: -5934635649.000005
[2025-06-05 08:12:21] 2025-06-05 08:12:08,743 | INFO     | mean x: 1749108613.0
[2025-06-05 08:12:21] 2025-06-05 08:12:08,743 | INFO     | mean y: 2734557.5844155843
[2025-06-05 08:12:21] 2025-06-05 08:12:08,743 | INFO     | -- intersect: 73341483170.05734
[2025-06-05 08:12:21] 2025-06-05 08:12:08,743 | INFO     | intersect: 73341483170.05734
[2025-06-05 08:12:21] 2025-06-05 08:12:08,743 | INFO     | chi2: 0.03228577733171275
[2025-06-05 08:12:21] 2025-06-05 08:12:08,743 | INFO     | -- intersect: 73341483170.05734
[2025-06-05 08:12:21] 2025-06-05 08:12:08,744 | INFO     | current memory leak: -41.93 B/s (using 77 data points, chi2=0.03)
[2025-06-05 08:12:21] 2025-06-05 08:12:08,744 | INFO     | ..............................
[2025-06-05 08:12:21] 2025-06-05 08:12:08,744 | INFO     | . Timing measurements:
[2025-06-05 08:12:21] 2025-06-05 08:12:08,744 | INFO     | . get job = 0 s
[2025-06-05 08:12:21] 2025-06-05 08:12:08,744 | INFO     | . initial setup = 1 s
[2025-06-05 08:12:21] 2025-06-05 08:12:08,744 | INFO     | . payload setup = 3 s
[2025-06-05 08:12:21] 2025-06-05 08:12:08,744 | INFO     | . stage-in = 0 s
[2025-06-05 08:12:21] 2025-06-05 08:12:08,744 | INFO     | . payload execution = 5092 s
[2025-06-05 08:12:21] 2025-06-05 08:12:08,744 | INFO     | . stage-out = 0 s
[2025-06-05 08:12:21] 2025-06-05 08:12:08,744 | INFO     | . log creation = 0 s
[2025-06-05 08:12:21] 2025-06-05 08:12:08,744 | INFO     | ..............................
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | 
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | job summary report
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | --------------------------------------------------
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | PanDA job id: 6668687865
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | task id: 44871837
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | errors: (none)
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | pilot state: finished 
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | transexitcode: 0
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | exeerrorcode: 0
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | exeerrordiag: 
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | exitcode: 0
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | exitmsg: OK
[2025-06-05 08:12:21] 2025-06-05 08:12:08,803 | INFO     | cpuconsumptiontime: 30255 s
[2025-06-05 08:12:21] 2025-06-05 08:12:08,804 | INFO     | nevents: 400
[2025-06-05 08:12:21] 2025-06-05 08:12:08,804 | INFO     | neventsw: 0
[2025-06-05 08:12:21] 2025-06-05 08:12:08,804 | INFO     | pid: 2838552
[2025-06-05 08:12:21] 2025-06-05 08:12:08,804 | INFO     | pgrp: 2838552
[2025-06-05 08:12:21] 2025-06-05 08:12:08,804 | INFO     | corecount: 12
[2025-06-05 08:12:21] 2025-06-05 08:12:08,804 | INFO     | event service: False
[2025-06-05 08:12:21] 2025-06-05 08:12:08,804 | INFO     | sizes: {0: 2397413, 3: 2397619, 11: 2397647, 5100: 2423974, 5101: 2423973, 5103: 2433016, 5105: 2433200, 5149: 2433370}
[2025-06-05 08:12:21] 2025-06-05 08:12:08,804 | INFO     | --------------------------------------------------
[2025-06-05 08:12:21] 2025-06-05 08:12:08,804 | INFO     | 
[2025-06-05 08:12:21] 2025-06-05 08:12:08,804 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/4
[2025-06-05 08:12:21] 2025-06-05 08:12:08,814 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,814 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,814 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,814 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,815 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:12:21] 2025-06-05 08:12:08,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,815 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:12:21] 2025-06-05 08:12:08,815 | INFO     | job 6668687865 has completed (purged errors)
[2025-06-05 08:12:21] 2025-06-05 08:12:08,815 | INFO     | overall cleanup function is called
[2025-06-05 08:12:21] 2025-06-05 08:12:09,822 | INFO     | --- collectZombieJob: --- 10, [2838552]
[2025-06-05 08:12:21] 2025-06-05 08:12:09,822 | INFO     | zombie collector waiting for pid 2838552
[2025-06-05 08:12:21] 2025-06-05 08:12:09,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:12:21] 2025-06-05 08:12:09,822 | INFO     | collected zombie processes
[2025-06-05 08:12:21] 2025-06-05 08:12:09,822 | INFO     | will attempt to kill all subprocesses of pid=2838552
[2025-06-05 08:12:21] 2025-06-05 08:12:09,864 | INFO     | PID=2820920 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 08:12:21] 2025-06-05 08:12:09,864 | INFO     | .. there are 2 such processes running
[2025-06-05 08:12:21] 2025-06-05 08:12:09,897 | INFO     | process IDs to be killed: [2838552] (in reverse order)
[2025-06-05 08:12:21] 2025-06-05 08:12:09,930 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:12:21] 2025-06-05 08:12:09,930 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:12:21] 2025-06-05 08:12:09,932 | INFO     | did not find any defunct processes belonging to 2838552
[2025-06-05 08:12:21] 2025-06-05 08:12:09,933 | INFO     | did not find any defunct processes belonging to 2838552
[2025-06-05 08:12:21] 2025-06-05 08:12:09,934 | INFO     | ready for new job
[2025-06-05 08:12:21] 2025-06-05 08:12:09,934 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:12:21] 2025-06-05 08:12:09,934 | INFO     | **************************************
[2025-06-05 08:12:21] 2025-06-05 08:12:09,934 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:12:21] 2025-06-05 08:12:09,935 | INFO     | **************************************
[2025-06-05 08:12:21] 2025-06-05 08:12:09,935 | INFO     | 
[2025-06-05 08:12:21] 2025-06-05 08:12:09,958 | INFO     | architecture information:
[2025-06-05 08:12:21] 2025-06-05 08:12:09,958 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:12:21] 2025-06-05 08:12:09,967 | INFO     | cat /etc/os-release:
[2025-06-05 08:12:21] NAME="CentOS Linux"
[2025-06-05 08:12:21] VERSION="7 (Core)"
[2025-06-05 08:12:21] ID="centos"
[2025-06-05 08:12:21] ID_LIKE="rhel fedora"
[2025-06-05 08:12:21] VERSION_ID="7"
[2025-06-05 08:12:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:12:21] ANSI_COLOR="0;31"
[2025-06-05 08:12:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:12:21] HOME_URL="https://www.centos.org/"
[2025-06-05 08:12:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:12:21] 
[2025-06-05 08:12:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:12:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:12:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:12:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:12:21] 
[2025-06-05 08:12:21] 2025-06-05 08:12:09,967 | INFO     | **************************************
[2025-06-05 08:12:21] 2025-06-05 08:12:10,470 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/4
[2025-06-05 08:12:21] 2025-06-05 08:12:10,488 | INFO     | sufficient remaining disk space (185461637120 B)
[2025-06-05 08:12:21] 2025-06-05 08:12:10,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:12:21] 2025-06-05 08:12:10,488 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:12:21] 2025-06-05 08:12:10,488 | INFO     | update_server=False
[2025-06-05 08:12:21] 2025-06-05 08:12:10,488 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:12:21] 2025-06-05 08:12:10,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:12:21] 2025-06-05 08:12:10,488 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 08:12:21] 2025-06-05 08:12:10,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:12:21] 2025-06-05 08:12:10,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:12:21] 2025-06-05 08:12:10,489 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:12:21] 2025-06-05 08:12:10,489 | INFO     | aborting loop
[2025-06-05 08:12:21] 2025-06-05 08:12:10,489 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:12:21] 2025-06-05 08:12:10,489 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:12:21] 2025-06-05 08:12:10,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:12:21] 2025-06-05 08:12:10,669 | INFO     | all data control threads have been joined
[2025-06-05 08:12:21] 2025-06-05 08:12:11,490 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:11,490 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:11,494 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:11,558 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:11,590 | INFO     | all job control threads have been joined
[2025-06-05 08:12:21] 2025-06-05 08:12:11,638 | INFO     | [job] validate thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:11,674 | INFO     | [data] control thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:11,774 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:11,790 | INFO     | all payload control threads have been joined
[2025-06-05 08:12:21] 2025-06-05 08:12:11,826 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:12,138 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:12,166 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:12,366 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:12,430 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:12,494 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:12,594 | INFO     | [job] control thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:12,794 | INFO     | [payload] control thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:14,610 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:12:21] 2025-06-05 08:12:16,398 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321225676608)>', '<ExcThread(monitor, started 140320759060224)>']
[2025-06-05 08:12:21] 2025-06-05 08:12:16,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:12:21] 2025-06-05 08:12:16,518 | INFO     | [monitor] control thread has ended
[2025-06-05 08:12:21] 2025-06-05 08:12:21,422 | INFO     | all workflow threads have been joined
[2025-06-05 08:12:21] 2025-06-05 08:12:21,422 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:12:21] 2025-06-05 08:12:21,422 | INFO     | traces error code: 0
[2025-06-05 08:12:21] 2025-06-05 08:12:21,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:12:21] 2025-06-05 08:12:21,511 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:12:21] 2025-06-05 08:12:21,512 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:12:21] 2025-06-05 08:12:21,514 [wrapper] pilotpid: 2820920
[2025-06-05 08:12:21] 2025-06-05 08:12:21,515 [wrapper] Pilot exit status: 0
[2025-06-05 08:12:21] 2025-06-05 08:12:21,558 [wrapper] pandaids: 6668687865
[2025-06-05 08:12:21] 2025-06-05 08:12:21,582 [wrapper] cleanup supervisor_pilot 2859001 2820921
[2025-06-05 08:12:21] 2025-06-05 08:12:21,584 [wrapper] Test setup, not cleaning
[2025-06-05 08:12:21] 2025-06-05 08:12:21,587 [wrapper] apfmon messages muted
[2025-06-05 08:12:21] 2025-06-05 08:12:21,588 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:12:21] 2025-06-05 08:12:21,591 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:12:21]  *** Error codes and diagnostics ***
[2025-06-05 08:12:21]     "exeErrorCode": 0,
[2025-06-05 08:12:21]     "exeErrorDiag": "",
[2025-06-05 08:12:21]     "pilotErrorCode": 0,
[2025-06-05 08:12:21]     "pilotErrorDiag": "",
[2025-06-05 08:12:21]  *** Listing of results directory ***
[2025-06-05 08:12:21] total 410260
[2025-06-05 08:12:21] -rw-r--r-- 1 boinc boinc    495897 Mai 28 15:15 pilot3.tar.gz
[2025-06-05 08:12:21] -rw-r--r-- 1 boinc boinc      5111 Mai 28 15:59 queuedata.json
[2025-06-05 08:12:21] -rwx------ 1 boinc boinc     37140 Mai 28 16:00 runpilot2-wrapper.sh
[2025-06-05 08:12:21] -rw-rw-r-- 1 boinc boinc       100 Jun  5 06:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:12:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 06:46 run_atlas
[2025-06-05 08:12:21] -rw-rw-r-- 1 boinc boinc       105 Jun  5 06:46 job.xml
[2025-06-05 08:12:21] -rw-r--r-- 2 boinc boinc     15093 Jun  5 06:46 start_atlas.sh
[2025-06-05 08:12:21] drwxrwx--x 2 boinc boinc      4096 Jun  5 06:46 shared
[2025-06-05 08:12:21] -rw-r--r-- 2 boinc boinc    508881 Jun  5 06:46 input.tar.gz
[2025-06-05 08:12:21] -rw-rw-r-- 1 boinc boinc      9704 Jun  5 06:46 init_data.xml
[2025-06-05 08:12:21] -rw-r--r-- 2 boinc boinc 222632274 Jun  5 06:46 EVNT.44871834._003372.pool.root.1
[2025-06-05 08:12:21] -rw-rw-r-- 1 boinc boinc         0 Jun  5 06:46 boinc_lockfile
[2025-06-05 08:12:21] -rw-rw-r-- 1 boinc boinc      2558 Jun  5 06:46 pandaJob.out
[2025-06-05 08:12:21] -rw------- 1 boinc boinc    986926 Jun  5 06:46 agis_schedconf.cvmfs.json
[2025-06-05 08:12:21] -rw------- 1 boinc boinc   1598969 Jun  5 06:46 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:12:21] drwx------ 4 boinc boinc      4096 Jun  5 06:46 pilot3
[2025-06-05 08:12:21] -rw------- 1 boinc boinc 191876077 Jun  5 08:10 HITS.44871837._086577.pool.root.1
[2025-06-05 08:12:21] -rw-rw-r-- 1 boinc boinc       529 Jun  5 08:11 boinc_task_state.xml
[2025-06-05 08:12:21] -rw------- 1 boinc boinc      1028 Jun  5 08:11 memory_monitor_summary.json
[2025-06-05 08:12:21] -rw------- 1 boinc boinc    356478 Jun  5 08:11 log.44871837._086577.job.log.tgz.1
[2025-06-05 08:12:21] -rw------- 1 boinc boinc        95 Jun  5 08:12 pilot_heartbeat.json
[2025-06-05 08:12:21] -rw------- 1 boinc boinc      7649 Jun  5 08:12 heartbeat.json
[2025-06-05 08:12:21] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 08:12 boinc_mmap_file
[2025-06-05 08:12:21] -rw-rw-r-- 1 boinc boinc        27 Jun  5 08:12 wrapper_checkpoint.txt
[2025-06-05 08:12:21] -rw------- 1 boinc boinc      4500 Jun  5 08:12 pilotlog.txt
[2025-06-05 08:12:21] -rw------- 1 boinc boinc    522103 Jun  5 08:12 log.44871837._086577.job.log.1
[2025-06-05 08:12:21] -rw------- 1 boinc boinc       357 Jun  5 08:12 output.list
[2025-06-05 08:12:21] -rw-rw-r-- 1 boinc boinc       620 Jun  5 08:12 runtime_log
[2025-06-05 08:12:21] -rw------- 1 boinc boinc    901120 Jun  5 08:12 result.tar.gz
[2025-06-05 08:12:21] -rw-rw-r-- 1 boinc boinc      8953 Jun  5 08:12 runtime_log.err
[2025-06-05 08:12:21] -rw------- 1 boinc boinc       648 Jun  5 08:12 dIPODmVNYe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwUcKDmyKAxgn.diag
[2025-06-05 08:12:21] -rw-rw-r-- 1 boinc boinc     22684 Jun  5 08:12 stderr.txt
[2025-06-05 08:12:21] HITS file was successfully produced:
[2025-06-05 08:12:21] -rw------- 1 boinc boinc 191876077 Jun  5 08:10 shared/HITS.pool.root.1
[2025-06-05 08:12:21]  *** Contents of shared directory: ***
[2025-06-05 08:12:21] total 406200
[2025-06-05 08:12:21] -rw-r--r-- 2 boinc boinc     15093 Jun  5 06:46 start_atlas.sh
[2025-06-05 08:12:21] -rw-r--r-- 2 boinc boinc    508881 Jun  5 06:46 input.tar.gz
[2025-06-05 08:12:21] -rw-r--r-- 2 boinc boinc 222632274 Jun  5 06:46 ATLAS.root_0
[2025-06-05 08:12:21] -rw------- 1 boinc boinc 191876077 Jun  5 08:10 HITS.pool.root.1
[2025-06-05 08:12:21] -rw------- 1 boinc boinc    901120 Jun  5 08:12 result.tar.gz
08:12:22 (2817246): run_atlas exited; CPU time 30276.982348
08:12:22 (2817246): called boinc_finish(0)

</stderr_txt>
]]>

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