Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:27:00 (29460): wrapper (7.7.26015): starting
19:27:00 (29460): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 19:27:00] Arguments: --nthreads 8
[2025-06-04 19:27:00] Threads: 8
[2025-06-04 19:27:00] Checking for CVMFS
[2025-06-04 19:27:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:27:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:27:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:27:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:27:00] 2.11.2.0 2893 36294 77608 146798 0 1 19037706 20275200 1 130560 0 12030951 99.977 6335036 7752 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 19:27:00] CVMFS is ok
[2025-06-04 19:27:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:27:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:27:00] Further information can be found at the LHC@home message board.
[2025-06-04 19:27:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:27:00] Checking for apptainer binary...
[2025-06-04 19:27:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:27:00] Running /usr/bin/apptainer --version
[2025-06-04 19:27:00] apptainer version 1.3.2-1.el7
[2025-06-04 19:27:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:27:02] c-115-6.aglt2.org
[2025-06-04 19:27:02] apptainer works
[2025-06-04 19:27:02] Set ATHENA_PROC_NUMBER=8
[2025-06-04 19:27:02] Set ATHENA_CORE_NUMBER=8
[2025-06-04 19:27:02] Starting ATLAS job with PandaID=6680169338
[2025-06-04 19:27:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:09:05]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:09:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 21:09:05]  replicas=None
[2025-06-04 21:09:05]  scope=mc23_13p6TeV
[2025-06-04 21:09:05]  status=None
[2025-06-04 21:09:05]  status_code=0
[2025-06-04 21:09:05]  storage_token=
[2025-06-04 21:09:05]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6680169338/log.45006595._056986.job.log.tgz.1
[2025-06-04 21:09:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/2e/log.45006595._056986.job.log.tgz.1
[2025-06-04 21:09:05]  workdir=None
[2025-06-04 21:09:05] ]
[2025-06-04 21:09:05] 2025-06-05 01:08:35,647 | INFO     | transferring file log.45006595._056986.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6680169338/log.45006595._056986.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 21:09:05] 2025-06-05 01:08:35,648 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6680169338/log.45006595._056986.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056986.job
[2025-06-04 21:09:05] 2025-06-05 01:08:35,671 | INFO     | adding to output.list: log.45006595._056986.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/2e/log.45006595._056986.job.log.tg
[2025-06-04 21:09:05] 2025-06-05 01:08:35,672 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 21:09:05] 2025-06-05 01:08:35,672 | INFO     | summary of transferred files:
[2025-06-04 21:09:05] 2025-06-05 01:08:35,673 | INFO     |  -- lfn=log.45006595._056986.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 21:09:05] 2025-06-05 01:08:35,673 | INFO     | stage-out finished correctly
[2025-06-04 21:09:05] 2025-06-05 01:08:36,557 | WARNING  | process 7406 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 21:09:05] 2025-06-05 01:08:36,558 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680169338/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:09:05] 2025-06-05 01:08:36,636 | INFO     | number of running child processes to parent process 7406: 1
[2025-06-04 21:09:05] 2025-06-05 01:08:36,636 | INFO     | maximum number of monitored processes: 6
[2025-06-04 21:09:05] 2025-06-05 01:08:36,977 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 21:09:05] 2025-06-05 01:08:39,059 | INFO     | job 6680169338 has state=finished
[2025-06-04 21:09:05] 2025-06-05 01:08:39,059 | INFO     | preparing for final server update for job 6680169338 in state='finished'
[2025-06-04 21:09:05] 2025-06-05 01:08:39,060 | INFO     | this job has now completed (state=finished)
[2025-06-04 21:09:05] 2025-06-05 01:08:39,060 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 21:09:05] 2025-06-05 01:08:39,061 | INFO     | log transfer has been attempted: DONE
[2025-06-04 21:09:05] 2025-06-05 01:08:39,061 | INFO     | job 6680169338 has finished - writing final server update
[2025-06-04 21:09:05] 2025-06-05 01:08:39,061 | INFO     | total number of processed events: 400 (read)
[2025-06-04 21:09:05] 2025-06-05 01:08:39,063 | INFO     | executing command: lscpu
[2025-06-04 21:09:05] 2025-06-05 01:08:39,091 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 21:09:05] 2025-06-05 01:08:39,140 | INFO     | monitor loop #451: job 0:6680169338 is in state 'finished'
[2025-06-04 21:09:05] 2025-06-05 01:08:39,140 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:09:05] 2025-06-05 01:08:41,644 | INFO     | monitor loop #452: job 0:6680169338 is in state 'finished'
[2025-06-04 21:09:05] 2025-06-05 01:08:41,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:09:05] 2025-06-05 01:08:43,317 | INFO     | 6086s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 21:09:05] 2025-06-05 01:08:44,147 | INFO     | monitor loop #453: job 0:6680169338 is in state 'finished'
[2025-06-04 21:09:05] 2025-06-05 01:08:44,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:09:05] 2025-06-05 01:08:44,928 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 21:09:05] 2025-06-05 01:08:44,929 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680169338/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:09:05] 2025-06-05 01:08:44,933 | INFO     | extracted standard info from prmon json
[2025-06-04 21:09:05] 2025-06-05 01:08:44,933 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:09:05] 2025-06-05 01:08:44,934 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:09:05] 2025-06-05 01:08:44,934 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:09:05] 2025-06-05 01:08:44,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:09:05] 2025-06-05 01:08:44,936 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:09:05] 2025-06-05 01:08:44,936 | INFO     | sum of square deviations: 241429643.0
[2025-06-04 21:09:05] 2025-06-05 01:08:44,937 | INFO     | sum of deviations: -16268203856.499998
[2025-06-04 21:09:05] 2025-06-05 01:08:44,937 | INFO     | mean x: 1749082753.5
[2025-06-04 21:09:05] 2025-06-05 01:08:44,937 | INFO     | mean y: 2620133.2065217393
[2025-06-04 21:09:05] 2025-06-05 01:08:44,937 | INFO     | -- intersect: 117860702687.82611
[2025-06-04 21:09:05] 2025-06-05 01:08:44,937 | INFO     | intersect: 117860702687.82611
[2025-06-04 21:09:05] 2025-06-05 01:08:44,938 | INFO     | chi2: 0.08617817563904662
[2025-06-04 21:09:05] 2025-06-05 01:08:44,938 | INFO     | -- intersect: 117860702687.82611
[2025-06-04 21:09:05] 2025-06-05 01:08:44,938 | INFO     | current memory leak: -67.38 B/s (using 92 data points, chi2=0.09)
[2025-06-04 21:09:05] 2025-06-05 01:08:44,938 | INFO     | ..............................
[2025-06-04 21:09:05] 2025-06-05 01:08:44,938 | INFO     | . Timing measurements:
[2025-06-04 21:09:05] 2025-06-05 01:08:44,938 | INFO     | . get job = 0 s
[2025-06-04 21:09:05] 2025-06-05 01:08:44,939 | INFO     | . initial setup = 2 s
[2025-06-04 21:09:05] 2025-06-05 01:08:44,939 | INFO     | . payload setup = 11 s
[2025-06-04 21:09:05] 2025-06-05 01:08:44,939 | INFO     | . stage-in = 0 s
[2025-06-04 21:09:05] 2025-06-05 01:08:44,939 | INFO     | . payload execution = 6043 s
[2025-06-04 21:09:05] 2025-06-05 01:08:44,939 | INFO     | . stage-out = 0 s
[2025-06-04 21:09:05] 2025-06-05 01:08:44,939 | INFO     | . log creation = 0 s
[2025-06-04 21:09:05] 2025-06-05 01:08:44,939 | INFO     | ..............................
[2025-06-04 21:09:05] 2025-06-05 01:08:45,206 | INFO     | 
[2025-06-04 21:09:05] 2025-06-05 01:08:45,207 | INFO     | job summary report
[2025-06-04 21:09:05] 2025-06-05 01:08:45,207 | INFO     | --------------------------------------------------
[2025-06-04 21:09:05] 2025-06-05 01:08:45,207 | INFO     | PanDA job id: 6680169338
[2025-06-04 21:09:05] 2025-06-05 01:08:45,207 | INFO     | task id: 45006595
[2025-06-04 21:09:05] 2025-06-05 01:08:45,208 | INFO     | errors: (none)
[2025-06-04 21:09:05] 2025-06-05 01:08:45,208 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:09:05] 2025-06-05 01:08:45,208 | INFO     | pilot state: finished 
[2025-06-04 21:09:05] 2025-06-05 01:08:45,208 | INFO     | transexitcode: 0
[2025-06-04 21:09:05] 2025-06-05 01:08:45,208 | INFO     | exeerrorcode: 0
[2025-06-04 21:09:05] 2025-06-05 01:08:45,208 | INFO     | exeerrordiag: 
[2025-06-04 21:09:05] 2025-06-05 01:08:45,209 | INFO     | exitcode: 0
[2025-06-04 21:09:05] 2025-06-05 01:08:45,209 | INFO     | exitmsg: OK
[2025-06-04 21:09:05] 2025-06-05 01:08:45,209 | INFO     | cpuconsumptiontime: 44968 s
[2025-06-04 21:09:05] 2025-06-05 01:08:45,209 | INFO     | nevents: 400
[2025-06-04 21:09:05] 2025-06-05 01:08:45,209 | INFO     | neventsw: 0
[2025-06-04 21:09:05] 2025-06-05 01:08:45,209 | INFO     | pid: 7406
[2025-06-04 21:09:05] 2025-06-05 01:08:45,210 | INFO     | pgrp: 7406
[2025-06-04 21:09:05] 2025-06-05 01:08:45,210 | INFO     | corecount: 8
[2025-06-04 21:09:05] 2025-06-05 01:08:45,210 | INFO     | event service: False
[2025-06-04 21:09:05] 2025-06-05 01:08:45,210 | INFO     | sizes: {0: 2397291, 6: 2397497, 11: 2397525, 6058: 2424124, 6059: 2433065, 6060: 2433121, 6068: 2433419}
[2025-06-04 21:09:05] 2025-06-05 01:08:45,210 | INFO     | --------------------------------------------------
[2025-06-04 21:09:05] 2025-06-05 01:08:45,210 | INFO     | 
[2025-06-04 21:09:05] 2025-06-05 01:08:45,211 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 21:09:05] 2025-06-05 01:08:45,237 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,237 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,237 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,238 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,239 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,239 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,239 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,239 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,240 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:09:05] 2025-06-05 01:08:45,240 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,241 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:09:05] 2025-06-05 01:08:45,241 | INFO     | job 6680169338 has completed (purged errors)
[2025-06-04 21:09:05] 2025-06-05 01:08:45,241 | INFO     | overall cleanup function is called
[2025-06-04 21:09:05] 2025-06-05 01:08:46,249 | INFO     | --- collectZombieJob: --- 10, [7406]
[2025-06-04 21:09:05] 2025-06-05 01:08:46,249 | INFO     | zombie collector waiting for pid 7406
[2025-06-04 21:09:05] 2025-06-05 01:08:46,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:09:05] 2025-06-05 01:08:46,250 | INFO     | collected zombie processes
[2025-06-04 21:09:05] 2025-06-05 01:08:46,250 | INFO     | will attempt to kill all subprocesses of pid=7406
[2025-06-04 21:09:05] 2025-06-05 01:08:46,345 | INFO     | process IDs to be killed: [7406] (in reverse order)
[2025-06-04 21:09:05] 2025-06-05 01:08:46,401 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:09:05] 2025-06-05 01:08:46,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:09:05] 2025-06-05 01:08:46,409 | INFO     | did not find any defunct processes belonging to 7406
[2025-06-04 21:09:05] 2025-06-05 01:08:46,416 | INFO     | did not find any defunct processes belonging to 7406
[2025-06-04 21:09:05] 2025-06-05 01:08:46,416 | INFO     | ready for new job
[2025-06-04 21:09:05] 2025-06-05 01:08:46,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:09:05] 2025-06-05 01:08:46,418 | INFO     | **************************************
[2025-06-04 21:09:05] 2025-06-05 01:08:46,418 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:09:05] 2025-06-05 01:08:46,418 | INFO     | **************************************
[2025-06-04 21:09:05] 2025-06-05 01:08:46,419 | INFO     | 
[2025-06-04 21:09:05] 2025-06-05 01:08:46,419 | INFO     | architecture information:
[2025-06-04 21:09:05] 2025-06-05 01:08:46,420 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:09:05] 2025-06-05 01:08:46,437 | INFO     | cat /etc/os-release:
[2025-06-04 21:09:05] NAME="CentOS Linux"
[2025-06-04 21:09:05] VERSION="7 (Core)"
[2025-06-04 21:09:05] ID="centos"
[2025-06-04 21:09:05] ID_LIKE="rhel fedora"
[2025-06-04 21:09:05] VERSION_ID="7"
[2025-06-04 21:09:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:09:05] ANSI_COLOR="0;31"
[2025-06-04 21:09:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:09:05] HOME_URL="https://www.centos.org/"
[2025-06-04 21:09:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:09:05] 
[2025-06-04 21:09:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:09:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:09:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:09:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:09:05] 
[2025-06-04 21:09:05] 2025-06-05 01:08:46,437 | INFO     | **************************************
[2025-06-04 21:09:05] 2025-06-05 01:08:46,467 | INFO     | PID=716 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-06-04 21:09:05] 2025-06-05 01:08:46,940 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 21:09:05] 2025-06-05 01:08:46,961 | INFO     | sufficient remaining disk space (18642632704 B)
[2025-06-04 21:09:05] 2025-06-05 01:08:46,961 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:09:05] 2025-06-05 01:08:46,962 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:09:05] 2025-06-05 01:08:46,962 | INFO     | update_server=False
[2025-06-04 21:09:05] 2025-06-05 01:08:46,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:09:05] 2025-06-05 01:08:46,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:09:05] 2025-06-05 01:08:46,963 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:09:05] 2025-06-05 01:08:46,963 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:09:05] 2025-06-05 01:08:46,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:09:05] 2025-06-05 01:08:46,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:09:05] 2025-06-05 01:08:46,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:09:05] 2025-06-05 01:08:47,145 | INFO     | all payload control threads have been joined
[2025-06-04 21:09:05] 2025-06-05 01:08:47,457 | INFO     | all data control threads have been joined
[2025-06-04 21:09:05] 2025-06-05 01:08:47,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:09:05] 2025-06-05 01:08:47,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:09:05] 2025-06-05 01:08:47,655 | INFO     | aborting loop
[2025-06-04 21:09:05] 2025-06-05 01:08:47,744 | INFO     | all job control threads have been joined
[2025-06-04 21:09:05] 2025-06-05 01:08:47,968 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:47,968 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:48,151 | INFO     | [payload] control thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:48,208 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:48,308 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:48,463 | INFO     | [data] control thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:48,542 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:48,658 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:48,750 | INFO     | [job] control thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:48,967 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:48,982 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:49,175 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:49,307 | INFO     | [job] validate thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:49,443 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:51,573 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:08:57,221 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:09:05] 2025-06-05 01:08:58,230 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:09:05] 2025-06-05 01:09:00,261 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140297187153728)>', '<ExcThread(monitor, started 140296432113408)>']
[2025-06-04 21:09:05] 2025-06-05 01:09:01,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:09:05] 2025-06-05 01:09:01,020 | INFO     | [monitor] control thread has ended
[2025-06-04 21:09:05] 2025-06-05 01:09:05,281 | INFO     | all workflow threads have been joined
[2025-06-04 21:09:05] 2025-06-05 01:09:05,281 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:09:05] 2025-06-05 01:09:05,282 | INFO     | traces error code: 0
[2025-06-04 21:09:05] 2025-06-05 01:09:05,283 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:09:05] 2025-06-05 01:09:05,391 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:09:05] 2025-06-05 01:09:05,396 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:09:05] 2025-06-05 01:09:05,400 [wrapper] pilotpid: 716
[2025-06-04 21:09:05] 2025-06-05 01:09:05,404 [wrapper] Pilot exit status: 0
[2025-06-04 21:09:05] 2025-06-05 01:09:05,422 [wrapper] pandaids: 6680169338
[2025-06-04 21:09:05] 2025-06-05 01:09:05,467 [wrapper] cleanup supervisor_pilot 31453 717
[2025-06-04 21:09:05] 2025-06-05 01:09:05,472 [wrapper] Test setup, not cleaning
[2025-06-04 21:09:05] 2025-06-05 01:09:05,477 [wrapper] apfmon messages muted
[2025-06-04 21:09:05] 2025-06-05 01:09:05,482 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:09:05] 2025-06-05 01:09:05,486 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:09:05]  *** Error codes and diagnostics ***
[2025-06-04 21:09:05]     "exeErrorCode": 0,
[2025-06-04 21:09:05]     "exeErrorDiag": "",
[2025-06-04 21:09:05]     "pilotErrorCode": 0,
[2025-06-04 21:09:05]     "pilotErrorDiag": "",
[2025-06-04 21:09:05]  *** Listing of results directory ***
[2025-06-04 21:09:05] total 390784
[2025-06-04 21:09:05] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 19:03 pilot3.tar.gz
[2025-06-04 21:09:05] -rwx------ 1 boincer umatlas     37140 Jun  4 19:26 runpilot2-wrapper.sh
[2025-06-04 21:09:05] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 19:26 queuedata.json
[2025-06-04 21:09:05] -rw-r--r-- 1 boincer umatlas       100 Jun  4 19:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:09:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 19:26 run_atlas
[2025-06-04 21:09:05] -rw-r--r-- 1 boincer umatlas       105 Jun  4 19:26 job.xml
[2025-06-04 21:09:05] -rw-r--r-- 2 boincer umatlas 215413806 Jun  4 19:27 EVNT.45006593._001967.pool.root.1
[2025-06-04 21:09:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:27 start_atlas.sh
[2025-06-04 21:09:05] drwxrwx--x 2 boincer umatlas      4096 Jun  4 19:27 shared
[2025-06-04 21:09:05] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 19:27 input.tar.gz
[2025-06-04 21:09:05] -rw-r--r-- 1 boincer umatlas         0 Jun  4 19:27 boinc_lockfile
[2025-06-04 21:09:05] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 19:27 pandaJob.out
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas    987117 Jun  4 19:27 agis_schedconf.cvmfs.json
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas   1598969 Jun  4 19:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:09:05] drwx------ 4 boincer umatlas      4096 Jun  4 19:27 pilot3
[2025-06-04 21:09:05] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 21:01 init_data.xml
[2025-06-04 21:09:05] -rw-r--r-- 1 boincer umatlas       530 Jun  4 21:08 boinc_task_state.xml
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas 179173162 Jun  4 21:08 HITS.45006595._056986.pool.root.1
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas      1047 Jun  4 21:08 memory_monitor_summary.json
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas    307481 Jun  4 21:08 log.45006595._056986.job.log.tgz.1
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas        95 Jun  4 21:08 pilot_heartbeat.json
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas      7745 Jun  4 21:08 heartbeat.json
[2025-06-04 21:09:05] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 21:08 boinc_mmap_file
[2025-06-04 21:09:05] -rw-r--r-- 1 boincer umatlas        27 Jun  4 21:08 wrapper_checkpoint.txt
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas      4863 Jun  4 21:09 pilotlog.txt
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas    563168 Jun  4 21:09 log.45006595._056986.job.log.1
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas       357 Jun  4 21:09 output.list
[2025-06-04 21:09:05] -rw-r--r-- 1 boincer umatlas       620 Jun  4 21:09 runtime_log
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas    890880 Jun  4 21:09 result.tar.gz
[2025-06-04 21:09:05] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 21:09 runtime_log.err
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas       657 Jun  4 21:09 KGKLDm3fCh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmp3nKDmx5PHlm.diag
[2025-06-04 21:09:05] -rw-r--r-- 1 boincer umatlas     21906 Jun  4 21:09 stderr.txt
[2025-06-04 21:09:05] HITS file was successfully produced:
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas 179173162 Jun  4 21:08 shared/HITS.pool.root.1
[2025-06-04 21:09:05]  *** Contents of shared directory: ***
[2025-06-04 21:09:05] total 386736
[2025-06-04 21:09:05] -rw-r--r-- 2 boincer umatlas 215413806 Jun  4 19:27 ATLAS.root_0
[2025-06-04 21:09:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:27 start_atlas.sh
[2025-06-04 21:09:05] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 19:27 input.tar.gz
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas 179173162 Jun  4 21:08 HITS.pool.root.1
[2025-06-04 21:09:05] -rw------- 1 boincer umatlas    890880 Jun  4 21:09 result.tar.gz
21:09:06 (29460): run_atlas exited; CPU time 44910.424243
21:09:06 (29460): called boinc_finish(0)

</stderr_txt>
]]>

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