Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:23:46 (2053785): wrapper (7.7.26015): starting
19:23:46 (2053785): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 19:23:46] Arguments: --nthreads 8
[2025-06-04 19:23:46] Threads: 8
[2025-06-04 19:23:46] Checking for CVMFS
[2025-06-04 19:23:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:23:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:23:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:23:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:23:47] 2.12.6.0 5356 478 146124 146798 2 260 24003896 32935936 24030 16776704 0 2209290 99.663 1741512 27718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 19:23:47] CVMFS is ok
[2025-06-04 19:23:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:23:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:23:47] Further information can be found at the LHC@home message board.
[2025-06-04 19:23:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:23:47] Checking for apptainer binary...
[2025-06-04 19:23:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:23:47] Running /usr/bin/apptainer --version
[2025-06-04 19:23:47] apptainer version 1.4.1-1.el9
[2025-06-04 19:23:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:23:47] c7-16-8.aglt2.org
[2025-06-04 19:23:47] apptainer works
[2025-06-04 19:23:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 19:23:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 19:23:47] Starting ATLAS job with PandaID=6680167118
[2025-06-04 19:23:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:11:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:11:41] 2025-06-05 01:11:23,111 | INFO     | total number of processed events: 400 (read)
[2025-06-04 21:11:41] 2025-06-05 01:11:23,129 | INFO     | executing command: lscpu
[2025-06-04 21:11:41] 2025-06-05 01:11:23,216 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 21:11:41] 2025-06-05 01:11:25,024 | INFO     | monitor loop #439: job 0:6680167118 is in state 'finished'
[2025-06-04 21:11:41] 2025-06-05 01:11:25,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:11:41] 2025-06-05 01:11:27,391 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 21:11:41] 2025-06-05 01:11:27,391 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6680167118/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:11:41] 2025-06-05 01:11:27,392 | INFO     | extracted standard info from prmon json
[2025-06-04 21:11:41] 2025-06-05 01:11:27,392 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:11:41] 2025-06-05 01:11:27,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:11:41] 2025-06-05 01:11:27,392 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:11:41] 2025-06-05 01:11:27,392 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:11:41] 2025-06-05 01:11:27,394 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:11:41] 2025-06-05 01:11:27,394 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 21:11:41] 2025-06-05 01:11:27,395 | INFO     | sum of deviations: 4912569547.0
[2025-06-04 21:11:41] 2025-06-05 01:11:27,395 | INFO     | mean x: 1749082675.5
[2025-06-04 21:11:41] 2025-06-05 01:11:27,395 | INFO     | mean y: 2265504.769230769
[2025-06-04 21:11:41] 2025-06-05 01:11:27,395 | INFO     | -- intersect: -24634333954.382133
[2025-06-04 21:11:41] 2025-06-05 01:11:27,395 | INFO     | intersect: -24634333954.382133
[2025-06-04 21:11:41] 2025-06-05 01:11:27,396 | INFO     | chi2: 1.8865615925144053
[2025-06-04 21:11:41] 2025-06-05 01:11:27,396 | INFO     | sum of square deviations: 300842850.0
[2025-06-04 21:11:41] 2025-06-05 01:11:27,396 | INFO     | sum of deviations: 5357640858.0
[2025-06-04 21:11:41] 2025-06-05 01:11:27,396 | INFO     | mean x: 1749082523.0
[2025-06-04 21:11:41] 2025-06-05 01:11:27,396 | INFO     | mean y: 2266886.272727273
[2025-06-04 21:11:41] 2025-06-05 01:11:27,396 | INFO     | -- intersect: -31146739943.168373
[2025-06-04 21:11:41] 2025-06-05 01:11:27,397 | INFO     | intersect: -31146739943.168373
[2025-06-04 21:11:41] 2025-06-05 01:11:27,397 | INFO     | chi2: 1.889483534542608
[2025-06-04 21:11:41] 2025-06-05 01:11:27,397 | INFO     | current chi2=1.889483534542608 (change=-0.15488187821678118 %)
[2025-06-04 21:11:41] 2025-06-05 01:11:27,397 | INFO     | right removable region: 98
[2025-06-04 21:11:41] 2025-06-05 01:11:27,397 | INFO     | sum of square deviations: 300842850.0
[2025-06-04 21:11:41] 2025-06-05 01:11:27,397 | INFO     | sum of deviations: -12532732552.000002
[2025-06-04 21:11:41] 2025-06-05 01:11:27,398 | INFO     | mean x: 1749082828.0
[2025-06-04 21:11:41] 2025-06-05 01:11:27,398 | INFO     | mean y: 2320177.585858586
[2025-06-04 21:11:41] 2025-06-05 01:11:27,398 | INFO     | -- intersect: 72866898127.90053
[2025-06-04 21:11:41] 2025-06-05 01:11:27,398 | INFO     | intersect: 72866898127.90053
[2025-06-04 21:11:41] 2025-06-05 01:11:27,398 | INFO     | chi2: 0.07866252557762639
[2025-06-04 21:11:41] 2025-06-05 01:11:27,398 | INFO     | current chi2=0.07866252557762639 (change=95.83037596600357 %)
[2025-06-04 21:11:41] 2025-06-05 01:11:27,398 | INFO     | sum of square deviations: 257521107.5
[2025-06-04 21:11:41] 2025-06-05 01:11:27,399 | INFO     | sum of deviations: -12107468551.000002
[2025-06-04 21:11:41] 2025-06-05 01:11:27,399 | INFO     | mean x: 1749082980.5
[2025-06-04 21:11:41] 2025-06-05 01:11:27,399 | INFO     | mean y: 2318599.5531914895
[2025-06-04 21:11:41] 2025-06-05 01:11:27,399 | INFO     | -- intersect: 82236227054.97212
[2025-06-04 21:11:41] 2025-06-05 01:11:27,399 | INFO     | intersect: 82236227054.97212
[2025-06-04 21:11:41] 2025-06-05 01:11:27,399 | INFO     | chi2: 0.06688966505549152
[2025-06-04 21:11:41] 2025-06-05 01:11:27,399 | INFO     | current chi2=0.06688966505549152 (change=14.9662885035608 %)
[2025-06-04 21:11:41] 2025-06-05 01:11:27,399 | INFO     | left removable region: 20
[2025-06-04 21:11:41] 2025-06-05 01:11:27,399 | INFO     | sum of square deviations: 147126479.5
[2025-06-04 21:11:41] 2025-06-05 01:11:27,400 | INFO     | sum of deviations: -8911722867.499998
[2025-06-04 21:11:41] 2025-06-05 01:11:27,400 | INFO     | mean x: 1749083102.5
[2025-06-04 21:11:41] 2025-06-05 01:11:27,400 | INFO     | mean y: 2316123.346153846
[2025-06-04 21:11:41] 2025-06-05 01:11:27,400 | INFO     | -- intersect: 105947513307.97052
[2025-06-04 21:11:41] 2025-06-05 01:11:27,400 | INFO     | intersect: 105947513307.97052
[2025-06-04 21:11:41] 2025-06-05 01:11:27,400 | INFO     | chi2: 0.05092295792435707
[2025-06-04 21:11:41] 2025-06-05 01:11:27,400 | INFO     | -- intersect: 105947513307.97052
[2025-06-04 21:11:41] 2025-06-05 01:11:27,400 | INFO     | current memory leak: -60.57 B/s (using 78 data points, chi2=0.05)
[2025-06-04 21:11:41] 2025-06-05 01:11:27,401 | INFO     | ..............................
[2025-06-04 21:11:41] 2025-06-05 01:11:27,401 | INFO     | . Timing measurements:
[2025-06-04 21:11:41] 2025-06-05 01:11:27,401 | INFO     | . get job = 0 s
[2025-06-04 21:11:41] 2025-06-05 01:11:27,401 | INFO     | . initial setup = 4 s
[2025-06-04 21:11:41] 2025-06-05 01:11:27,401 | INFO     | . payload setup = 24 s
[2025-06-04 21:11:41] 2025-06-05 01:11:27,401 | INFO     | . stage-in = 0 s
[2025-06-04 21:11:41] 2025-06-05 01:11:27,401 | INFO     | . payload execution = 6354 s
[2025-06-04 21:11:41] 2025-06-05 01:11:27,401 | INFO     | . stage-out = 0 s
[2025-06-04 21:11:41] 2025-06-05 01:11:27,401 | INFO     | . log creation = 0 s
[2025-06-04 21:11:41] 2025-06-05 01:11:27,401 | INFO     | ..............................
[2025-06-04 21:11:41] 2025-06-05 01:11:27,521 | INFO     | 
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | job summary report
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | --------------------------------------------------
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | PanDA job id: 6680167118
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | task id: 45006595
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | errors: (none)
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | pilot state: finished 
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | transexitcode: 0
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | exeerrorcode: 0
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | exeerrordiag: 
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | exitcode: 0
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | exitmsg: OK
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | cpuconsumptiontime: 28508 s
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | nevents: 400
[2025-06-04 21:11:41] 2025-06-05 01:11:27,522 | INFO     | neventsw: 0
[2025-06-04 21:11:41] 2025-06-05 01:11:27,523 | INFO     | pid: 2067027
[2025-06-04 21:11:41] 2025-06-05 01:11:27,523 | INFO     | pgrp: 2067027
[2025-06-04 21:11:41] 2025-06-05 01:11:27,523 | INFO     | corecount: 8
[2025-06-04 21:11:41] 2025-06-05 01:11:27,523 | INFO     | event service: False
[2025-06-04 21:11:41] 2025-06-05 01:11:27,523 | INFO     | sizes: {0: 2397120, 1: 2397319, 12: 2397553, 23: 2397553, 6382: 2424492, 6383: 2424491, 6384: 2433616, 6385: 2433700, 6392: 2433870}
[2025-06-04 21:11:41] 2025-06-05 01:11:27,523 | INFO     | --------------------------------------------------
[2025-06-04 21:11:41] 2025-06-05 01:11:27,523 | INFO     | 
[2025-06-04 21:11:41] 2025-06-05 01:11:27,523 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 21:11:41] 2025-06-05 01:11:27,543 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,543 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,543 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,543 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,544 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:11:41] 2025-06-05 01:11:27,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,544 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:11:41] 2025-06-05 01:11:27,544 | INFO     | job 6680167118 has completed (purged errors)
[2025-06-04 21:11:41] 2025-06-05 01:11:27,545 | INFO     | overall cleanup function is called
[2025-06-04 21:11:41] 2025-06-05 01:11:28,554 | INFO     | --- collectZombieJob: --- 10, [2067027]
[2025-06-04 21:11:41] 2025-06-05 01:11:28,554 | INFO     | zombie collector waiting for pid 2067027
[2025-06-04 21:11:41] 2025-06-05 01:11:28,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:11:41] 2025-06-05 01:11:28,554 | INFO     | collected zombie processes
[2025-06-04 21:11:41] 2025-06-05 01:11:28,554 | INFO     | will attempt to kill all subprocesses of pid=2067027
[2025-06-04 21:11:41] 2025-06-05 01:11:28,939 | INFO     | process IDs to be killed: [2067027] (in reverse order)
[2025-06-04 21:11:41] 2025-06-05 01:11:29,064 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:11:41] 2025-06-05 01:11:29,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:11:41] 2025-06-05 01:11:29,081 | INFO     | did not find any defunct processes belonging to 2067027
[2025-06-04 21:11:41] 2025-06-05 01:11:29,097 | INFO     | did not find any defunct processes belonging to 2067027
[2025-06-04 21:11:41] 2025-06-05 01:11:29,097 | INFO     | ready for new job
[2025-06-04 21:11:41] 2025-06-05 01:11:29,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:11:41] 2025-06-05 01:11:29,099 | INFO     | **************************************
[2025-06-04 21:11:41] 2025-06-05 01:11:29,099 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:11:41] 2025-06-05 01:11:29,099 | INFO     | **************************************
[2025-06-04 21:11:41] 2025-06-05 01:11:29,099 | INFO     | 
[2025-06-04 21:11:41] 2025-06-05 01:11:29,118 | INFO     | architecture information:
[2025-06-04 21:11:41] 2025-06-05 01:11:29,118 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:11:41] 2025-06-05 01:11:29,136 | INFO     | cat /etc/os-release:
[2025-06-04 21:11:41] NAME="CentOS Linux"
[2025-06-04 21:11:41] VERSION="7 (Core)"
[2025-06-04 21:11:41] ID="centos"
[2025-06-04 21:11:41] ID_LIKE="rhel fedora"
[2025-06-04 21:11:41] VERSION_ID="7"
[2025-06-04 21:11:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:11:41] ANSI_COLOR="0;31"
[2025-06-04 21:11:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:11:41] HOME_URL="https://www.centos.org/"
[2025-06-04 21:11:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:11:41] 
[2025-06-04 21:11:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:11:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:11:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:11:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:11:41] 
[2025-06-04 21:11:41] 2025-06-05 01:11:29,136 | INFO     | **************************************
[2025-06-04 21:11:41] 2025-06-05 01:11:29,640 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 21:11:41] 2025-06-05 01:11:29,659 | INFO     | sufficient remaining disk space (76024905728 B)
[2025-06-04 21:11:41] 2025-06-05 01:11:29,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:11:41] 2025-06-05 01:11:29,659 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:11:41] 2025-06-05 01:11:29,659 | INFO     | update_server=False
[2025-06-04 21:11:41] 2025-06-05 01:11:29,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:11:41] 2025-06-05 01:11:29,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:11:41] 2025-06-05 01:11:29,660 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:11:41] 2025-06-05 01:11:29,660 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:11:41] 2025-06-05 01:11:29,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:11:41] 2025-06-05 01:11:29,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:11:41] 2025-06-05 01:11:29,851 | INFO     | all data control threads have been joined
[2025-06-04 21:11:41] 2025-06-05 01:11:30,034 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 21:11:41] 2025-06-05 01:11:30,034 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 21:11:41] 2025-06-05 01:11:30,034 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:11:41] 2025-06-05 01:11:30,034 | INFO     | will abort loop
[2025-06-04 21:11:41] 2025-06-05 01:11:30,068 | INFO     | all job control threads have been joined
[2025-06-04 21:11:41] 2025-06-05 01:11:30,455 | INFO     | all payload control threads have been joined
[2025-06-04 21:11:41] 2025-06-05 01:11:30,665 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:30,859 | INFO     | [data] control thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:31,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:11:41] 2025-06-05 01:11:31,040 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:31,074 | INFO     | [job] control thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:31,081 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:31,232 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:31,380 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:31,460 | INFO     | [payload] control thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:31,461 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:31,503 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:31,589 | INFO     | [job] validate thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:31,666 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:31,980 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:32,085 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:32,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:11:41] 2025-06-05 01:11:33,497 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:35,048 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:11:41] 2025-06-05 01:11:36,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139812755449664)>', '<ExcThread(monitor, started 139812073871104)>']
[2025-06-04 21:11:41] 2025-06-05 01:11:36,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:11:41] 2025-06-05 01:11:36,692 | INFO     | [monitor] control thread has ended
[2025-06-04 21:11:41] 2025-06-05 01:11:41,456 | INFO     | all workflow threads have been joined
[2025-06-04 21:11:41] 2025-06-05 01:11:41,456 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:11:41] 2025-06-05 01:11:41,456 | INFO     | traces error code: 0
[2025-06-04 21:11:41] 2025-06-05 01:11:41,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:11:41] 2025-06-05 01:11:41,577 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:11:41] 2025-06-05 01:11:41,579 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:11:41] 2025-06-05 01:11:41,582 [wrapper] pilotpid: 2059868
[2025-06-04 21:11:41] 2025-06-05 01:11:41,585 [wrapper] Pilot exit status: 0
[2025-06-04 21:11:41] 2025-06-05 01:11:41,597 [wrapper] pandaids: 6680167118
[2025-06-04 21:11:41] 2025-06-05 01:11:41,688 [wrapper] cleanup supervisor_pilot 2459084 2059869
[2025-06-04 21:11:41] 2025-06-05 01:11:41,691 [wrapper] Test setup, not cleaning
[2025-06-04 21:11:41] 2025-06-05 01:11:41,694 [wrapper] apfmon messages muted
[2025-06-04 21:11:41] 2025-06-05 01:11:41,696 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:11:41] 2025-06-05 01:11:41,698 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:11:41]  *** Error codes and diagnostics ***
[2025-06-04 21:11:41]     "exeErrorCode": 0,
[2025-06-04 21:11:41]     "exeErrorDiag": "",
[2025-06-04 21:11:41]     "pilotErrorCode": 0,
[2025-06-04 21:11:41]     "pilotErrorDiag": "",
[2025-06-04 21:11:41]  *** Listing of results directory ***
[2025-06-04 21:11:41] total 390092
[2025-06-04 21:11:41] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 19:03 pilot3.tar.gz
[2025-06-04 21:11:41] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 19:22 queuedata.json
[2025-06-04 21:11:41] -rwx------. 1 boincer umatlas     37140 Jun  4 19:23 runpilot2-wrapper.sh
[2025-06-04 21:11:41] -rw-r--r--. 1 boincer umatlas       100 Jun  4 19:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:11:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 19:23 run_atlas
[2025-06-04 21:11:41] -rw-r--r--. 1 boincer umatlas       105 Jun  4 19:23 job.xml
[2025-06-04 21:11:41] -rw-r--r--. 2 boincer umatlas 216707695 Jun  4 19:23 EVNT.45006593._001978.pool.root.1
[2025-06-04 21:11:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 19:23 start_atlas.sh
[2025-06-04 21:11:41] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 19:23 shared
[2025-06-04 21:11:41] -rw-r--r--. 2 boincer umatlas    508891 Jun  4 19:23 input.tar.gz
[2025-06-04 21:11:41] -rw-r--r--. 1 boincer umatlas         0 Jun  4 19:23 boinc_lockfile
[2025-06-04 21:11:41] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 19:23 pandaJob.out
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas    987117 Jun  4 19:24 agis_schedconf.cvmfs.json
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas   1598969 Jun  4 19:24 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:11:41] drwx------. 4 boincer umatlas      4096 Jun  4 19:24 pilot3
[2025-06-04 21:11:41] -rw-r--r--. 1 boincer umatlas      6930 Jun  4 21:10 init_data.xml
[2025-06-04 21:11:41] -rw-r--r--. 1 boincer umatlas       529 Jun  4 21:10 boinc_task_state.xml
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas 177085276 Jun  4 21:10 HITS.45006595._056984.pool.root.1
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas        95 Jun  4 21:11 pilot_heartbeat.json
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas      1039 Jun  4 21:11 memory_monitor_summary.json
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas    330773 Jun  4 21:11 log.45006595._056984.job.log.tgz.1
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas      7700 Jun  4 21:11 heartbeat.json
[2025-06-04 21:11:41] -rw-r--r--. 1 boincer umatlas        27 Jun  4 21:11 wrapper_checkpoint.txt
[2025-06-04 21:11:41] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 21:11 boinc_mmap_file
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas      4662 Jun  4 21:11 pilotlog.txt
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas    586211 Jun  4 21:11 log.45006595._056984.job.log.1
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas       357 Jun  4 21:11 output.list
[2025-06-04 21:11:41] -rw-r--r--. 1 boincer umatlas       620 Jun  4 21:11 runtime_log
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas    931840 Jun  4 21:11 result.tar.gz
[2025-06-04 21:11:41] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 21:11 runtime_log.err
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas       654 Jun  4 21:11 AIZNDm7cCh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmn3nKDmbBNMNo.diag
[2025-06-04 21:11:41] -rw-r--r--. 1 boincer umatlas     21125 Jun  4 21:11 stderr.txt
[2025-06-04 21:11:41] HITS file was successfully produced:
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas 177085276 Jun  4 21:10 shared/HITS.pool.root.1
[2025-06-04 21:11:41]  *** Contents of shared directory: ***
[2025-06-04 21:11:41] total 386000
[2025-06-04 21:11:41] -rw-r--r--. 2 boincer umatlas 216707695 Jun  4 19:23 ATLAS.root_0
[2025-06-04 21:11:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 19:23 start_atlas.sh
[2025-06-04 21:11:41] -rw-r--r--. 2 boincer umatlas    508891 Jun  4 19:23 input.tar.gz
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas 177085276 Jun  4 21:10 HITS.pool.root.1
[2025-06-04 21:11:41] -rw-------. 1 boincer umatlas    931840 Jun  4 21:11 result.tar.gz
21:11:43 (2053785): run_atlas exited; CPU time 28680.865816
21:11:43 (2053785): called boinc_finish(0)

</stderr_txt>
]]>

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