Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:36:13 (1744922): wrapper (7.7.26015): starting
20:36:13 (1744922): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 20:36:13] Arguments: --nthreads 12
[2025-06-04 20:36:13] Threads: 12
[2025-06-04 20:36:13] Checking for CVMFS
[2025-06-04 20:36:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:36:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:36:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:36:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:36:13] 2.12.6.0 5047 32179 428988 146799 0 264 27772098 32935937 13151 16776704 1 104840023 99.635 103774566 26812 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 20:36:13] CVMFS is ok
[2025-06-04 20:36:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 20:36:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 20:36:13] Further information can be found at the LHC@home message board.
[2025-06-04 20:36:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:36:13] Checking for apptainer binary...
[2025-06-04 20:36:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:36:13] Running /usr/bin/apptainer --version
[2025-06-04 20:36:13] apptainer version 1.4.1-1.el9
[2025-06-04 20:36:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:36:14] c6-6-39-2.aglt2.org
[2025-06-04 20:36:14] apptainer works
[2025-06-04 20:36:14] Set ATHENA_PROC_NUMBER=12
[2025-06-04 20:36:14] Set ATHENA_CORE_NUMBER=12
[2025-06-04 20:36:14] Starting ATLAS job with PandaID=6668442578
[2025-06-04 20:36:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:43:57]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:43:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 21:43:57]  is_altstaged=None
[2025-06-04 21:43:57]  is_tar=False
[2025-06-04 21:43:57]  lfn=log.44871837._084501.job.log.tgz.1
[2025-06-04 21:43:57]  mtime=0
[2025-06-04 21:43:57]  protocol_id=None
[2025-06-04 21:43:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 21:43:57]  replicas=None
[2025-06-04 21:43:57]  scope=mc23_13p6TeV
[2025-06-04 21:43:57]  status=None
[2025-06-04 21:43:57]  status_code=0
[2025-06-04 21:43:57]  storage_token=
[2025-06-04 21:43:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668442578/log.44871837._084501.job.log.tgz.1
[2025-06-04 21:43:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/a2/log.44871837._084501.job.log.tgz.1
[2025-06-04 21:43:57]  workdir=None
[2025-06-04 21:43:57] ]
[2025-06-04 21:43:57] 2025-06-05 01:43:39,036 | INFO     | transferring file log.44871837._084501.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668442578/log.44871837._084501.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 21:43:57] 2025-06-05 01:43:39,036 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668442578/log.44871837._084501.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._084501.job
[2025-06-04 21:43:57] 2025-06-05 01:43:39,058 | INFO     | adding to output.list: log.44871837._084501.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/a2/log.44871837._084501.job.log.tg
[2025-06-04 21:43:57] 2025-06-05 01:43:39,059 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 21:43:57] 2025-06-05 01:43:39,059 | INFO     | summary of transferred files:
[2025-06-04 21:43:57] 2025-06-05 01:43:39,059 | INFO     |  -- lfn=log.44871837._084501.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 21:43:57] 2025-06-05 01:43:39,059 | INFO     | stage-out finished correctly
[2025-06-04 21:43:57] 2025-06-05 01:43:41,230 | INFO     | monitor loop #303: job 0:6668442578 is in state 'finished'
[2025-06-04 21:43:57] 2025-06-05 01:43:41,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:43:57] 2025-06-05 01:43:41,631 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 21:43:57] 2025-06-05 01:43:41,713 | INFO     | job 6668442578 has state=finished
[2025-06-04 21:43:57] 2025-06-05 01:43:41,714 | INFO     | preparing for final server update for job 6668442578 in state='finished'
[2025-06-04 21:43:57] 2025-06-05 01:43:41,714 | INFO     | this job has now completed (state=finished)
[2025-06-04 21:43:57] 2025-06-05 01:43:41,714 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 21:43:57] 2025-06-05 01:43:41,714 | INFO     | log transfer has been attempted: DONE
[2025-06-04 21:43:57] 2025-06-05 01:43:41,715 | INFO     | job 6668442578 has finished - writing final server update
[2025-06-04 21:43:57] 2025-06-05 01:43:41,715 | INFO     | total number of processed events: 400 (read)
[2025-06-04 21:43:57] 2025-06-05 01:43:41,731 | INFO     | executing command: lscpu
[2025-06-04 21:43:57] 2025-06-05 01:43:41,806 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 21:43:57] 2025-06-05 01:43:43,422 | INFO     | PID=1750437 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 21:43:57] 2025-06-05 01:43:43,422 | INFO     | .. there are 22 such processes running
[2025-06-04 21:43:57] 2025-06-05 01:43:43,734 | INFO     | monitor loop #304: job 0:6668442578 is in state 'finished'
[2025-06-04 21:43:57] 2025-06-05 01:43:43,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:43:57] 2025-06-05 01:43:45,902 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 21:43:57] 2025-06-05 01:43:45,902 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668442578/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:43:57] 2025-06-05 01:43:45,903 | INFO     | extracted standard info from prmon json
[2025-06-04 21:43:57] 2025-06-05 01:43:45,903 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:43:57] 2025-06-05 01:43:45,903 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:43:57] 2025-06-05 01:43:45,904 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:43:57] 2025-06-05 01:43:45,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:43:57] 2025-06-05 01:43:45,905 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:43:57] 2025-06-05 01:43:45,906 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 21:43:57] 2025-06-05 01:43:45,906 | INFO     | sum of deviations: -10149913646.999998
[2025-06-04 21:43:57] 2025-06-05 01:43:45,906 | INFO     | mean x: 1749085885.0
[2025-06-04 21:43:57] 2025-06-05 01:43:45,906 | INFO     | mean y: 2650107.9491525423
[2025-06-04 21:43:57] 2025-06-05 01:43:45,906 | INFO     | -- intersect: 278848254540.44366
[2025-06-04 21:43:57] 2025-06-05 01:43:45,906 | INFO     | intersect: 278848254540.44366
[2025-06-04 21:43:57] 2025-06-05 01:43:45,906 | INFO     | chi2: 0.12409097056180247
[2025-06-04 21:43:57] 2025-06-05 01:43:45,906 | INFO     | -- intersect: 278848254540.44366
[2025-06-04 21:43:57] 2025-06-05 01:43:45,906 | INFO     | current memory leak: -159.42 B/s (using 59 data points, chi2=0.12)
[2025-06-04 21:43:57] 2025-06-05 01:43:45,907 | INFO     | ..............................
[2025-06-04 21:43:57] 2025-06-05 01:43:45,907 | INFO     | . Timing measurements:
[2025-06-04 21:43:57] 2025-06-05 01:43:45,907 | INFO     | . get job = 0 s
[2025-06-04 21:43:57] 2025-06-05 01:43:45,907 | INFO     | . initial setup = 3 s
[2025-06-04 21:43:57] 2025-06-05 01:43:45,907 | INFO     | . payload setup = 6 s
[2025-06-04 21:43:57] 2025-06-05 01:43:45,907 | INFO     | . stage-in = 0 s
[2025-06-04 21:43:57] 2025-06-05 01:43:45,907 | INFO     | . payload execution = 4007 s
[2025-06-04 21:43:57] 2025-06-05 01:43:45,907 | INFO     | . stage-out = 0 s
[2025-06-04 21:43:57] 2025-06-05 01:43:45,907 | INFO     | . log creation = 0 s
[2025-06-04 21:43:57] 2025-06-05 01:43:45,907 | INFO     | ..............................
[2025-06-04 21:43:57] 2025-06-05 01:43:45,996 | INFO     | 
[2025-06-04 21:43:57] 2025-06-05 01:43:45,996 | INFO     | job summary report
[2025-06-04 21:43:57] 2025-06-05 01:43:45,996 | INFO     | --------------------------------------------------
[2025-06-04 21:43:57] 2025-06-05 01:43:45,996 | INFO     | PanDA job id: 6668442578
[2025-06-04 21:43:57] 2025-06-05 01:43:45,996 | INFO     | task id: 44871837
[2025-06-04 21:43:57] 2025-06-05 01:43:45,996 | INFO     | errors: (none)
[2025-06-04 21:43:57] 2025-06-05 01:43:45,996 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:43:57] 2025-06-05 01:43:45,996 | INFO     | pilot state: finished 
[2025-06-04 21:43:57] 2025-06-05 01:43:45,996 | INFO     | transexitcode: 0
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | exeerrorcode: 0
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | exeerrordiag: 
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | exitcode: 0
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | exitmsg: OK
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | cpuconsumptiontime: 43057 s
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | nevents: 400
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | neventsw: 0
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | pid: 1759808
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | pgrp: 1759808
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | corecount: 12
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | event service: False
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | sizes: {0: 2397392, 1: 2397392, 5: 2397626, 11: 2397682, 4018: 2423487, 4019: 2432428, 4022: 2432612, 4026: 2432782}
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | --------------------------------------------------
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | 
[2025-06-04 21:43:57] 2025-06-05 01:43:45,997 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 21:43:57] 2025-06-05 01:43:46,017 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,018 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,018 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,018 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,019 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:43:57] 2025-06-05 01:43:46,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,019 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:43:57] 2025-06-05 01:43:46,019 | INFO     | job 6668442578 has completed (purged errors)
[2025-06-04 21:43:57] 2025-06-05 01:43:46,019 | INFO     | overall cleanup function is called
[2025-06-04 21:43:57] 2025-06-05 01:43:46,428 | INFO     | 4044s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 21:43:57] 2025-06-05 01:43:47,027 | INFO     | --- collectZombieJob: --- 10, [1759808]
[2025-06-04 21:43:57] 2025-06-05 01:43:47,028 | INFO     | zombie collector waiting for pid 1759808
[2025-06-04 21:43:57] 2025-06-05 01:43:47,028 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:43:57] 2025-06-05 01:43:47,028 | INFO     | collected zombie processes
[2025-06-04 21:43:57] 2025-06-05 01:43:47,028 | INFO     | will attempt to kill all subprocesses of pid=1759808
[2025-06-04 21:43:57] 2025-06-05 01:43:47,288 | INFO     | process IDs to be killed: [1759808] (in reverse order)
[2025-06-04 21:43:57] 2025-06-05 01:43:47,379 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:43:57] 2025-06-05 01:43:47,379 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:43:57] 2025-06-05 01:43:47,397 | INFO     | did not find any defunct processes belonging to 1759808
[2025-06-04 21:43:57] 2025-06-05 01:43:47,414 | INFO     | did not find any defunct processes belonging to 1759808
[2025-06-04 21:43:57] 2025-06-05 01:43:47,415 | INFO     | ready for new job
[2025-06-04 21:43:57] 2025-06-05 01:43:47,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:43:57] 2025-06-05 01:43:47,417 | INFO     | **************************************
[2025-06-04 21:43:57] 2025-06-05 01:43:47,417 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:43:57] 2025-06-05 01:43:47,417 | INFO     | **************************************
[2025-06-04 21:43:57] 2025-06-05 01:43:47,417 | INFO     | 
[2025-06-04 21:43:57] 2025-06-05 01:43:47,434 | INFO     | architecture information:
[2025-06-04 21:43:57] 2025-06-05 01:43:47,434 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:43:57] 2025-06-05 01:43:47,451 | INFO     | cat /etc/os-release:
[2025-06-04 21:43:57] NAME="CentOS Linux"
[2025-06-04 21:43:57] VERSION="7 (Core)"
[2025-06-04 21:43:57] ID="centos"
[2025-06-04 21:43:57] ID_LIKE="rhel fedora"
[2025-06-04 21:43:57] VERSION_ID="7"
[2025-06-04 21:43:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:43:57] ANSI_COLOR="0;31"
[2025-06-04 21:43:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:43:57] HOME_URL="https://www.centos.org/"
[2025-06-04 21:43:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:43:57] 
[2025-06-04 21:43:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:43:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:43:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:43:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:43:57] 
[2025-06-04 21:43:57] 2025-06-05 01:43:47,451 | INFO     | **************************************
[2025-06-04 21:43:57] 2025-06-05 01:43:47,954 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 21:43:57] 2025-06-05 01:43:47,972 | INFO     | sufficient remaining disk space (76327944192 B)
[2025-06-04 21:43:57] 2025-06-05 01:43:47,972 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:43:57] 2025-06-05 01:43:47,973 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:43:57] 2025-06-05 01:43:47,973 | INFO     | update_server=False
[2025-06-04 21:43:57] 2025-06-05 01:43:47,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:43:57] 2025-06-05 01:43:47,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:43:57] 2025-06-05 01:43:47,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:43:57] 2025-06-05 01:43:47,974 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:43:57] 2025-06-05 01:43:47,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:43:57] 2025-06-05 01:43:47,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:43:57] 2025-06-05 01:43:47,974 | INFO     | aborting loop
[2025-06-04 21:43:57] 2025-06-05 01:43:47,975 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:43:57] 2025-06-05 01:43:47,976 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:43:57] 2025-06-05 01:43:47,976 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:43:57] 2025-06-05 01:43:48,184 | INFO     | all data control threads have been joined
[2025-06-04 21:43:57] 2025-06-05 01:43:48,859 | INFO     | all job control threads have been joined
[2025-06-04 21:43:57] 2025-06-05 01:43:48,978 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:48,981 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:48,981 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:49,094 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:49,189 | INFO     | [data] control thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:49,241 | INFO     | [job] validate thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:49,458 | INFO     | all payload control threads have been joined
[2025-06-04 21:43:57] 2025-06-05 01:43:49,546 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:49,547 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:49,728 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:49,862 | INFO     | [job] control thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:49,911 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:49,961 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:49,979 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:50,452 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:50,462 | INFO     | [payload] control thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:51,981 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:43:57] 2025-06-05 01:43:52,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139909977978688)>', '<ExcThread(monitor, started 139909356578560)>']
[2025-06-04 21:43:57] 2025-06-05 01:43:53,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:43:57] 2025-06-05 01:43:53,001 | INFO     | [monitor] control thread has ended
[2025-06-04 21:43:57] 2025-06-05 01:43:57,274 | INFO     | all workflow threads have been joined
[2025-06-04 21:43:57] 2025-06-05 01:43:57,275 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:43:57] 2025-06-05 01:43:57,275 | INFO     | traces error code: 0
[2025-06-04 21:43:57] 2025-06-05 01:43:57,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:43:57] 2025-06-05 01:43:57,471 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:43:57] 2025-06-05 01:43:57,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:43:57] 2025-06-05 01:43:57,476 [wrapper] pilotpid: 1750437
[2025-06-04 21:43:57] 2025-06-05 01:43:57,479 [wrapper] Pilot exit status: 0
[2025-06-04 21:43:57] 2025-06-05 01:43:57,488 [wrapper] pandaids: 6668442578
[2025-06-04 21:43:57] 2025-06-05 01:43:57,535 [wrapper] cleanup supervisor_pilot 1952993 1750438
[2025-06-04 21:43:57] 2025-06-05 01:43:57,537 [wrapper] Test setup, not cleaning
[2025-06-04 21:43:57] 2025-06-05 01:43:57,540 [wrapper] apfmon messages muted
[2025-06-04 21:43:57] 2025-06-05 01:43:57,542 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:43:57] 2025-06-05 01:43:57,545 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:43:57]  *** Error codes and diagnostics ***
[2025-06-04 21:43:57]     "exeErrorCode": 0,
[2025-06-04 21:43:57]     "exeErrorDiag": "",
[2025-06-04 21:43:57]     "pilotErrorCode": 0,
[2025-06-04 21:43:57]     "pilotErrorDiag": "",
[2025-06-04 21:43:57]  *** Listing of results directory ***
[2025-06-04 21:43:57] total 415816
[2025-06-04 21:43:57] -rw-r--r--. 1 boincer umatlas      5111 May 28 08:41 queuedata.json
[2025-06-04 21:43:57] -rwx------. 1 boincer umatlas     37140 May 28 08:42 runpilot2-wrapper.sh
[2025-06-04 21:43:57] -rw-r--r--. 1 boincer umatlas    495897 May 28 08:42 pilot3.tar.gz
[2025-06-04 21:43:57] -rw-r--r--. 1 boincer umatlas       100 Jun  4 20:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:43:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 20:36 run_atlas
[2025-06-04 21:43:57] -rw-r--r--. 1 boincer umatlas       105 Jun  4 20:36 job.xml
[2025-06-04 21:43:57] -rw-r--r--. 2 boincer umatlas 223540555 Jun  4 20:36 EVNT.44871834._003297.pool.root.1
[2025-06-04 21:43:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 20:36 start_atlas.sh
[2025-06-04 21:43:57] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 20:36 shared
[2025-06-04 21:43:57] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 20:36 input.tar.gz
[2025-06-04 21:43:57] -rw-r--r--. 1 boincer umatlas         0 Jun  4 20:36 boinc_lockfile
[2025-06-04 21:43:57] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 20:36 pandaJob.out
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas    987117 Jun  4 20:36 agis_schedconf.cvmfs.json
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas   1598969 Jun  4 20:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:43:57] drwx------. 4 boincer umatlas      4096 Jun  4 20:36 pilot3
[2025-06-04 21:43:57] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 21:40 init_data.xml
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas 196900683 Jun  4 21:43 HITS.44871837._084501.pool.root.1
[2025-06-04 21:43:57] -rw-r--r--. 1 boincer umatlas       529 Jun  4 21:43 boinc_task_state.xml
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas      1038 Jun  4 21:43 memory_monitor_summary.json
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas    356493 Jun  4 21:43 log.44871837._084501.job.log.tgz.1
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas        95 Jun  4 21:43 pilot_heartbeat.json
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas      7724 Jun  4 21:43 heartbeat.json
[2025-06-04 21:43:57] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 21:43 boinc_mmap_file
[2025-06-04 21:43:57] -rw-r--r--. 1 boincer umatlas        27 Jun  4 21:43 wrapper_checkpoint.txt
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas      4476 Jun  4 21:43 pilotlog.txt
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas    407022 Jun  4 21:43 log.44871837._084501.job.log.1
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas       357 Jun  4 21:43 output.list
[2025-06-04 21:43:57] -rw-r--r--. 1 boincer umatlas       620 Jun  4 21:43 runtime_log
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas    778240 Jun  4 21:43 result.tar.gz
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas       654 Jun  4 21:43 vS5LDm3HVe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwVTKDmflnb2n.diag
[2025-06-04 21:43:57] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 21:43 runtime_log.err
[2025-06-04 21:43:57] -rw-r--r--. 1 boincer umatlas     21495 Jun  4 21:43 stderr.txt
[2025-06-04 21:43:57] HITS file was successfully produced:
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas 196900683 Jun  4 21:43 shared/HITS.pool.root.1
[2025-06-04 21:43:57]  *** Contents of shared directory: ***
[2025-06-04 21:43:57] total 411872
[2025-06-04 21:43:57] -rw-r--r--. 2 boincer umatlas 223540555 Jun  4 20:36 ATLAS.root_0
[2025-06-04 21:43:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 20:36 start_atlas.sh
[2025-06-04 21:43:57] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 20:36 input.tar.gz
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas 196900683 Jun  4 21:43 HITS.pool.root.1
[2025-06-04 21:43:57] -rw-------. 1 boincer umatlas    778240 Jun  4 21:43 result.tar.gz
21:43:58 (1744922): run_atlas exited; CPU time 43119.552966
21:43:58 (1744922): called boinc_finish(0)

</stderr_txt>
]]>

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