Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:08:46 (1013988): wrapper (7.7.26015): starting
03:08:46 (1013988): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 03:08:46] Arguments: --nthreads 4
[2025-06-05 03:08:46] Threads: 4
[2025-06-05 03:08:46] Checking for CVMFS
[2025-06-05 03:08:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 03:08:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 03:08:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 03:08:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 03:08:46] 2.9.2.0 9870 2651 92876 146799 0 56 30650478 36864000 0 130560 0 2669041 99.993 545621 18802 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 03:08:46] CVMFS is ok
[2025-06-05 03:08:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 03:08:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 03:08:46] Further information can be found at the LHC@home message board.
[2025-06-05 03:08:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:08:46] Checking for apptainer binary...
[2025-06-05 03:08:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 03:08:46] Running /usr/bin/apptainer --version
[2025-06-05 03:08:46] apptainer version 1.3.6-6.1
[2025-06-05 03:08:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:08:46] atlasA139
[2025-06-05 03:08:46] apptainer works
[2025-06-05 03:08:47] Set ATHENA_PROC_NUMBER=4
[2025-06-05 03:08:47] Set ATHENA_CORE_NUMBER=4
[2025-06-05 03:08:47] Starting ATLAS job with PandaID=6669238001
[2025-06-05 03:08:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:35:48]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:35:48]  is_altstaged=None
[2025-06-05 04:35:48]  is_tar=False
[2025-06-05 04:35:48]  lfn=log.44871837._094972.job.log.tgz.1
[2025-06-05 04:35:48]  mtime=0
[2025-06-05 04:35:48]  protocol_id=None
[2025-06-05 04:35:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 04:35:48]  replicas=None
[2025-06-05 04:35:48]  scope=mc23_13p6TeV
[2025-06-05 04:35:48]  status=None
[2025-06-05 04:35:48]  status_code=0
[2025-06-05 04:35:48]  storage_token=
[2025-06-05 04:35:48]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6669238001/log.44871837._094972.job.log.tgz.1
[2025-06-05 04:35:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/45/log.44871837._094972.job.log.tgz.1
[2025-06-05 04:35:48]  workdir=None
[2025-06-05 04:35:48] ]
[2025-06-05 04:35:48] 2025-06-05 02:35:26,171 | INFO     | transferring file log.44871837._094972.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6669238001/log.44871837._094972.job.log.tgz.1 to /local/data/boinc/
[2025-06-05 04:35:48] 2025-06-05 02:35:26,171 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6669238001/log.44871837._094972.job.log.tgz.1 /local/data/boinc/slots/0/log.44871837._0949
[2025-06-05 04:35:48] 2025-06-05 02:35:26,190 | INFO     | adding to output.list: log.44871837._094972.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/45/log.44871837._094972.job.log.tg
[2025-06-05 04:35:48] 2025-06-05 02:35:26,190 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 04:35:48] 2025-06-05 02:35:26,190 | INFO     | summary of transferred files:
[2025-06-05 04:35:48] 2025-06-05 02:35:26,190 | INFO     |  -- lfn=log.44871837._094972.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 04:35:48] 2025-06-05 02:35:26,190 | INFO     | stage-out finished correctly
[2025-06-05 04:35:48] 2025-06-05 02:35:27,641 | WARNING  | process 1024323 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 04:35:48] 2025-06-05 02:35:27,641 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6669238001/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:35:48] 2025-06-05 02:35:27,689 | INFO     | number of running child processes to parent process 1024323: 1
[2025-06-05 04:35:48] 2025-06-05 02:35:27,689 | INFO     | maximum number of monitored processes: 6
[2025-06-05 04:35:48] 2025-06-05 02:35:28,139 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 04:35:48] 2025-06-05 02:35:28,181 | INFO     | job 6669238001 has state=finished
[2025-06-05 04:35:48] 2025-06-05 02:35:28,181 | INFO     | preparing for final server update for job 6669238001 in state='finished'
[2025-06-05 04:35:48] 2025-06-05 02:35:28,181 | INFO     | this job has now completed (state=finished)
[2025-06-05 04:35:48] 2025-06-05 02:35:28,181 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 04:35:48] 2025-06-05 02:35:28,181 | INFO     | log transfer has been attempted: DONE
[2025-06-05 04:35:48] 2025-06-05 02:35:28,181 | INFO     | job 6669238001 has finished - writing final server update
[2025-06-05 04:35:48] 2025-06-05 02:35:28,181 | INFO     | total number of processed events: 400 (read)
[2025-06-05 04:35:48] 2025-06-05 02:35:28,182 | INFO     | executing command: lscpu
[2025-06-05 04:35:48] 2025-06-05 02:35:28,201 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 04:35:48] 2025-06-05 02:35:30,192 | INFO     | monitor loop #399: job 0:6669238001 is in state 'finished'
[2025-06-05 04:35:48] 2025-06-05 02:35:30,192 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:35:48] 2025-06-05 02:35:32,695 | INFO     | monitor loop #400: job 0:6669238001 is in state 'finished'
[2025-06-05 04:35:48] 2025-06-05 02:35:32,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:35:48] 2025-06-05 02:35:33,752 | INFO     | PID=1017695 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 04:35:48] 2025-06-05 02:35:33,891 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 04:35:48] 2025-06-05 02:35:33,891 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6669238001/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:35:48] 2025-06-05 02:35:33,892 | INFO     | extracted standard info from prmon json
[2025-06-05 04:35:48] 2025-06-05 02:35:33,892 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:35:48] 2025-06-05 02:35:33,892 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:35:48] 2025-06-05 02:35:33,892 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:35:48] 2025-06-05 02:35:33,892 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | sum of square deviations: 147126479.5
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | sum of deviations: -1623713860.0000002
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | mean x: 1749088410.5
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | mean y: 2405418.5897435895
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | -- intersect: 19305654596.751587
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | intersect: 19305654596.751587
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | chi2: 0.0640835199763514
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | -- intersect: 19305654596.751587
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | current memory leak: -11.04 B/s (using 78 data points, chi2=0.06)
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | ..............................
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | . Timing measurements:
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | . get job = 0 s
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | . initial setup = 1 s
[2025-06-05 04:35:48] 2025-06-05 02:35:33,893 | INFO     | . payload setup = 4 s
[2025-06-05 04:35:48] 2025-06-05 02:35:33,894 | INFO     | . stage-in = 0 s
[2025-06-05 04:35:48] 2025-06-05 02:35:33,894 | INFO     | . payload execution = 5168 s
[2025-06-05 04:35:48] 2025-06-05 02:35:33,894 | INFO     | . stage-out = 0 s
[2025-06-05 04:35:48] 2025-06-05 02:35:33,894 | INFO     | . log creation = 0 s
[2025-06-05 04:35:48] 2025-06-05 02:35:33,894 | INFO     | ..............................
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | 
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | job summary report
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | --------------------------------------------------
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | PanDA job id: 6669238001
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | task id: 44871837
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | errors: (none)
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | pilot state: finished 
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | transexitcode: 0
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | exeerrorcode: 0
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | exeerrordiag: 
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | exitcode: 0
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | exitmsg: OK
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | cpuconsumptiontime: 19652 s
[2025-06-05 04:35:48] 2025-06-05 02:35:33,934 | INFO     | nevents: 400
[2025-06-05 04:35:48] 2025-06-05 02:35:33,935 | INFO     | neventsw: 0
[2025-06-05 04:35:48] 2025-06-05 02:35:33,935 | INFO     | pid: 1024323
[2025-06-05 04:35:48] 2025-06-05 02:35:33,935 | INFO     | pgrp: 1024323
[2025-06-05 04:35:48] 2025-06-05 02:35:33,935 | INFO     | corecount: 4
[2025-06-05 04:35:48] 2025-06-05 02:35:33,935 | INFO     | event service: False
[2025-06-05 04:35:48] 2025-06-05 02:35:33,935 | INFO     | sizes: {0: 2397395, 4: 2397601, 11: 2397629, 5176: 2424099, 5178: 2433046, 5180: 2433102, 5186: 2433400}
[2025-06-05 04:35:48] 2025-06-05 02:35:33,935 | INFO     | --------------------------------------------------
[2025-06-05 04:35:48] 2025-06-05 02:35:33,935 | INFO     | 
[2025-06-05 04:35:48] 2025-06-05 02:35:33,935 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 04:35:48] 2025-06-05 02:35:33,952 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | job 6669238001 has completed (purged errors)
[2025-06-05 04:35:48] 2025-06-05 02:35:33,953 | INFO     | overall cleanup function is called
[2025-06-05 04:35:48] 2025-06-05 02:35:34,960 | INFO     | --- collectZombieJob: --- 10, [1024323]
[2025-06-05 04:35:48] 2025-06-05 02:35:34,960 | INFO     | zombie collector waiting for pid 1024323
[2025-06-05 04:35:48] 2025-06-05 02:35:34,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:35:48] 2025-06-05 02:35:34,961 | INFO     | collected zombie processes
[2025-06-05 04:35:48] 2025-06-05 02:35:34,961 | INFO     | will attempt to kill all subprocesses of pid=1024323
[2025-06-05 04:35:48] 2025-06-05 02:35:35,014 | INFO     | process IDs to be killed: [1024323] (in reverse order)
[2025-06-05 04:35:48] 2025-06-05 02:35:35,048 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:35:48] 2025-06-05 02:35:35,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:35:48] 2025-06-05 02:35:35,051 | INFO     | did not find any defunct processes belonging to 1024323
[2025-06-05 04:35:48] 2025-06-05 02:35:35,052 | INFO     | did not find any defunct processes belonging to 1024323
[2025-06-05 04:35:48] 2025-06-05 02:35:35,052 | INFO     | ready for new job
[2025-06-05 04:35:48] 2025-06-05 02:35:35,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:35:48] 2025-06-05 02:35:35,053 | INFO     | **************************************
[2025-06-05 04:35:48] 2025-06-05 02:35:35,053 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:35:48] 2025-06-05 02:35:35,053 | INFO     | **************************************
[2025-06-05 04:35:48] 2025-06-05 02:35:35,053 | INFO     | 
[2025-06-05 04:35:48] 2025-06-05 02:35:35,054 | INFO     | architecture information:
[2025-06-05 04:35:48] 2025-06-05 02:35:35,054 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:35:48] 2025-06-05 02:35:35,067 | INFO     | cat /etc/os-release:
[2025-06-05 04:35:48] NAME="CentOS Linux"
[2025-06-05 04:35:48] VERSION="7 (Core)"
[2025-06-05 04:35:48] ID="centos"
[2025-06-05 04:35:48] ID_LIKE="rhel fedora"
[2025-06-05 04:35:48] VERSION_ID="7"
[2025-06-05 04:35:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:35:48] ANSI_COLOR="0;31"
[2025-06-05 04:35:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:35:48] HOME_URL="https://www.centos.org/"
[2025-06-05 04:35:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:35:48] 
[2025-06-05 04:35:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:35:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:35:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:35:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:35:48] 
[2025-06-05 04:35:48] 2025-06-05 02:35:35,067 | INFO     | **************************************
[2025-06-05 04:35:48] 2025-06-05 02:35:35,570 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 04:35:48] 2025-06-05 02:35:35,587 | INFO     | sufficient remaining disk space (326498254848 B)
[2025-06-05 04:35:48] 2025-06-05 02:35:35,587 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:35:48] 2025-06-05 02:35:35,588 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:35:48] 2025-06-05 02:35:35,588 | INFO     | update_server=False
[2025-06-05 04:35:48] 2025-06-05 02:35:35,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:35:48] 2025-06-05 02:35:35,588 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:35:48] 2025-06-05 02:35:35,758 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:35:48] 2025-06-05 02:35:35,758 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:35:48] 2025-06-05 02:35:35,758 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:35:48] 2025-06-05 02:35:35,945 | INFO     | all data control threads have been joined
[2025-06-05 04:35:48] 2025-06-05 02:35:36,205 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:35:48] 2025-06-05 02:35:36,205 | INFO     | aborting loop
[2025-06-05 04:35:48] 2025-06-05 02:35:36,593 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:36,593 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:36,653 | INFO     | all payload control threads have been joined
[2025-06-05 04:35:48] 2025-06-05 02:35:36,681 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:36,746 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:35:48] 2025-06-05 02:35:36,750 | INFO     | all job control threads have been joined
[2025-06-05 04:35:48] 2025-06-05 02:35:36,856 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:36,867 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:36,951 | INFO     | [data] control thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:37,211 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:37,399 | INFO     | [job] validate thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:37,436 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:37,442 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:37,530 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:37,658 | INFO     | [payload] control thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:37,756 | INFO     | [job] control thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:37,904 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:38,691 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:35:48] 2025-06-05 02:35:38,752 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:42,698 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:35:48] 2025-06-05 02:35:42,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796122879808)>', '<ExcThread(monitor, started 139795254724352)>']
[2025-06-05 04:35:48] 2025-06-05 02:35:43,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:35:48] 2025-06-05 02:35:43,798 | INFO     | [monitor] control thread has ended
[2025-06-05 04:35:48] 2025-06-05 02:35:48,023 | INFO     | all workflow threads have been joined
[2025-06-05 04:35:48] 2025-06-05 02:35:48,024 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:35:48] 2025-06-05 02:35:48,024 | INFO     | traces error code: 0
[2025-06-05 04:35:48] 2025-06-05 02:35:48,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:35:48] 2025-06-05 02:35:48,092 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:35:48] 2025-06-05 02:35:48,096 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:35:48] 2025-06-05 02:35:48,100 [wrapper] pilotpid: 1017695
[2025-06-05 04:35:48] 2025-06-05 02:35:48,104 [wrapper] Pilot exit status: 0
[2025-06-05 04:35:48] 2025-06-05 02:35:48,115 [wrapper] pandaids: 6669238001
[2025-06-05 04:35:48] 2025-06-05 02:35:48,137 [wrapper] cleanup supervisor_pilot 1036827 1017696
[2025-06-05 04:35:48] 2025-06-05 02:35:48,141 [wrapper] Test setup, not cleaning
[2025-06-05 04:35:48] 2025-06-05 02:35:48,145 [wrapper] apfmon messages muted
[2025-06-05 04:35:48] 2025-06-05 02:35:48,149 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:35:48] 2025-06-05 02:35:48,152 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:35:48]  *** Error codes and diagnostics ***
[2025-06-05 04:35:48]     "exeErrorCode": 0,
[2025-06-05 04:35:48]     "exeErrorDiag": "",
[2025-06-05 04:35:48]     "pilotErrorCode": 0,
[2025-06-05 04:35:48]     "pilotErrorDiag": "",
[2025-06-05 04:35:48]  *** Listing of results directory ***
[2025-06-05 04:35:48] total 412832
[2025-06-05 04:35:48] -rw-r--r-- 1 boinc boinc    495897 May 29 06:11 pilot3.tar.gz
[2025-06-05 04:35:48] -rwx------ 1 boinc boinc     37140 May 29 06:34 runpilot2-wrapper.sh
[2025-06-05 04:35:48] -rw-r--r-- 1 boinc boinc      5111 May 29 06:34 queuedata.json
[2025-06-05 04:35:48] -rw-r--r-- 1 boinc boinc       100 Jun  5 03:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:35:48] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 03:08 run_atlas
[2025-06-05 04:35:48] -rw-r--r-- 1 boinc boinc       105 Jun  5 03:08 job.xml
[2025-06-05 04:35:48] -rw-r--r-- 2 boinc boinc 226004728 Jun  5 03:08 EVNT.44871834._003689.pool.root.1
[2025-06-05 04:35:48] -rw-r--r-- 1 boinc boinc      6856 Jun  5 03:08 init_data.xml
[2025-06-05 04:35:48] drwxrwx--x 2 boinc boinc      4096 Jun  5 03:08 shared
[2025-06-05 04:35:48] -rw-r--r-- 2 boinc boinc    508873 Jun  5 03:08 input.tar.gz
[2025-06-05 04:35:48] -rw-r--r-- 2 boinc boinc     15093 Jun  5 03:08 start_atlas.sh
[2025-06-05 04:35:48] -rw-r--r-- 1 boinc boinc         0 Jun  5 03:08 boinc_lockfile
[2025-06-05 04:35:48] -rw-r--r-- 1 boinc boinc      2559 Jun  5 03:08 pandaJob.out
[2025-06-05 04:35:48] -rw------- 1 boinc boinc    987117 Jun  5 03:08 agis_schedconf.cvmfs.json
[2025-06-05 04:35:48] -rw------- 1 boinc boinc   1598969 Jun  5 03:08 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:35:48] drwx------ 4 boinc boinc      4096 Jun  5 03:08 pilot3
[2025-06-05 04:35:48] -rw-r--r-- 1 boinc boinc       529 Jun  5 04:35 boinc_task_state.xml
[2025-06-05 04:35:48] -rw------- 1 boinc boinc 191388104 Jun  5 04:35 HITS.44871837._094972.pool.root.1
[2025-06-05 04:35:48] -rw------- 1 boinc boinc      1019 Jun  5 04:35 memory_monitor_summary.json
[2025-06-05 04:35:48] -rw------- 1 boinc boinc        95 Jun  5 04:35 pilot_heartbeat.json
[2025-06-05 04:35:48] -rw------- 1 boinc boinc    256909 Jun  5 04:35 log.44871837._094972.job.log.tgz.1
[2025-06-05 04:35:48] -rw------- 1 boinc boinc      7661 Jun  5 04:35 heartbeat.json
[2025-06-05 04:35:48] -rw-r--r-- 1 boinc boinc        27 Jun  5 04:35 wrapper_checkpoint.txt
[2025-06-05 04:35:48] -rw-r--r-- 1 boinc boinc      8192 Jun  5 04:35 boinc_mmap_file
[2025-06-05 04:35:48] -rw------- 1 boinc boinc      4357 Jun  5 04:35 pilotlog.txt
[2025-06-05 04:35:48] -rw------- 1 boinc boinc    501120 Jun  5 04:35 log.44871837._094972.job.log.1
[2025-06-05 04:35:48] -rw------- 1 boinc boinc       357 Jun  5 04:35 output.list
[2025-06-05 04:35:48] -rw-r--r-- 1 boinc boinc       620 Jun  5 04:35 runtime_log
[2025-06-05 04:35:48] -rw------- 1 boinc boinc    778240 Jun  5 04:35 result.tar.gz
[2025-06-05 04:35:48] -rw------- 1 boinc boinc       661 Jun  5 04:35 z0BLDmc9je7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbdUKDm1tmRQn.diag
[2025-06-05 04:35:48] -rw-r--r-- 1 boinc boinc      8748 Jun  5 04:35 runtime_log.err
[2025-06-05 04:35:48] -rw-r--r-- 1 boinc boinc     21524 Jun  5 04:35 stderr.txt
[2025-06-05 04:35:48] HITS file was successfully produced:
[2025-06-05 04:35:48] -rw------- 1 boinc boinc 191388104 Jun  5 04:35 shared/HITS.pool.root.1
[2025-06-05 04:35:48]  *** Contents of shared directory: ***
[2025-06-05 04:35:48] total 408896
[2025-06-05 04:35:48] -rw-r--r-- 2 boinc boinc 226004728 Jun  5 03:08 ATLAS.root_0
[2025-06-05 04:35:48] -rw-r--r-- 2 boinc boinc    508873 Jun  5 03:08 input.tar.gz
[2025-06-05 04:35:48] -rw-r--r-- 2 boinc boinc     15093 Jun  5 03:08 start_atlas.sh
[2025-06-05 04:35:48] -rw------- 1 boinc boinc 191388104 Jun  5 04:35 HITS.pool.root.1
[2025-06-05 04:35:48] -rw------- 1 boinc boinc    778240 Jun  5 04:35 result.tar.gz
04:35:49 (1013988): run_atlas exited; CPU time 19672.993366
04:35:49 (1013988): called boinc_finish(0)

</stderr_txt>
]]>

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