Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:30:48 (14589): wrapper (7.7.26015): starting
10:30:48 (14589): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 10:30:48] Arguments: --nthreads 8
[2025-06-05 10:30:48] Threads: 8
[2025-06-05 10:30:48] Checking for CVMFS
[2025-06-05 10:30:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 10:30:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 10:30:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 10:30:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 10:30:50] 2.11.2.0 3973 34552 94796 146812 0 59 16099200 25165825 3907 130560 0 19220160 99.761 22233889 2718 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 10:30:50] CVMFS is ok
[2025-06-05 10:30:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:30:50] Checking for apptainer binary...
[2025-06-05 10:30:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 10:30:50] Running /usr/bin/apptainer --version
[2025-06-05 10:30:50] apptainer version 1.3.2-1.el7
[2025-06-05 10:30:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:31:06] cg-vwn471.simple-grid.lan
[2025-06-05 10:31:06] apptainer works
[2025-06-05 10:31:07] Set ATHENA_PROC_NUMBER=8
[2025-06-05 10:31:07] Set ATHENA_CORE_NUMBER=8
[2025-06-05 10:31:07] Starting ATLAS job with PandaID=6667364861
[2025-06-05 10:31:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:38:51]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:38:51] 2025-06-05 13:25:53,734 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6667364861/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:38:51] 2025-06-05 13:25:53,735 | INFO     | extracted standard info from prmon json
[2025-06-05 15:38:51] 2025-06-05 13:25:53,735 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:38:51] 2025-06-05 13:25:53,735 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:38:51] 2025-06-05 13:25:53,735 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:38:51] 2025-06-05 13:25:53,735 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:38:51] 2025-06-05 13:25:53,741 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:38:51] 2025-06-05 13:25:53,742 | INFO     | sum of square deviations: 6590404498.0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,744 | INFO     | sum of deviations: 89361887780.0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,744 | INFO     | mean x: 1749121429.0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,744 | INFO     | mean y: 2454585.2563176895
[2025-06-05 15:38:51] 2025-06-05 13:25:53,744 | INFO     | -- intersect: -23714571114.65714
[2025-06-05 15:38:51] 2025-06-05 13:25:53,744 | INFO     | intersect: -23714571114.65714
[2025-06-05 15:38:51] 2025-06-05 13:25:53,745 | INFO     | chi2: 6.113662079043934
[2025-06-05 15:38:51] 2025-06-05 13:25:53,745 | INFO     | sum of square deviations: 6239923508.0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,747 | INFO     | sum of deviations: 105579043023.99998
[2025-06-05 15:38:51] 2025-06-05 13:25:53,747 | INFO     | mean x: 1749121276.5
[2025-06-05 15:38:51] 2025-06-05 13:25:53,747 | INFO     | mean y: 2461525.4852941176
[2025-06-05 15:38:51] 2025-06-05 13:25:53,748 | INFO     | -- intersect: -29592540764.050346
[2025-06-05 15:38:51] 2025-06-05 13:25:53,748 | INFO     | intersect: -29592540764.050346
[2025-06-05 15:38:51] 2025-06-05 13:25:53,748 | INFO     | chi2: 5.387880885897445
[2025-06-05 15:38:51] 2025-06-05 13:25:53,748 | INFO     | current chi2=5.387880885897445 (change=11.871464005743473 %)
[2025-06-05 15:38:51] 2025-06-05 13:25:53,748 | INFO     | right removable region: 271
[2025-06-05 15:38:51] 2025-06-05 13:25:53,749 | INFO     | sum of square deviations: 6239923508.0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,751 | INFO     | sum of deviations: -4549646539.5
[2025-06-05 15:38:51] 2025-06-05 13:25:53,751 | INFO     | mean x: 1749121581.5
[2025-06-05 15:38:51] 2025-06-05 13:25:53,751 | INFO     | mean y: 2495409.283088235
[2025-06-05 15:38:51] 2025-06-05 13:25:53,751 | INFO     | -- intersect: 1277813117.9430902
[2025-06-05 15:38:51] 2025-06-05 13:25:53,751 | INFO     | intersect: 1277813117.9430902
[2025-06-05 15:38:51] 2025-06-05 13:25:53,752 | INFO     | chi2: 1.653861638566502
[2025-06-05 15:38:51] 2025-06-05 13:25:53,752 | INFO     | current chi2=1.653861638566502 (change=72.94810185477023 %)
[2025-06-05 15:38:51] 2025-06-05 13:25:53,752 | INFO     | sum of square deviations: 5902093918.0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,754 | INFO     | sum of deviations: -35654055188.0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,754 | INFO     | mean x: 1749121734.0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,755 | INFO     | mean y: 2509344.4269662923
[2025-06-05 15:38:51] 2025-06-05 13:25:53,755 | INFO     | -- intersect: 10568807289.021324
[2025-06-05 15:38:51] 2025-06-05 13:25:53,755 | INFO     | intersect: 10568807289.021324
[2025-06-05 15:38:51] 2025-06-05 13:25:53,755 | INFO     | chi2: 0.9269749816449412
[2025-06-05 15:38:51] 2025-06-05 13:25:53,755 | INFO     | current chi2=0.9269749816449412 (change=43.95087472683602 %)
[2025-06-05 15:38:51] 2025-06-05 13:25:53,756 | INFO     | sum of square deviations: 5576683165.5
[2025-06-05 15:38:51] 2025-06-05 13:25:53,758 | INFO     | sum of deviations: -37065189263.5
[2025-06-05 15:38:51] 2025-06-05 13:25:53,758 | INFO     | mean x: 1749121886.5
[2025-06-05 15:38:51] 2025-06-05 13:25:53,758 | INFO     | mean y: 2509990.2786259544
[2025-06-05 15:38:51] 2025-06-05 13:25:53,758 | INFO     | -- intersect: 11627974777.148928
[2025-06-05 15:38:51] 2025-06-05 13:25:53,758 | INFO     | intersect: 11627974777.148928
[2025-06-05 15:38:51] 2025-06-05 13:25:53,759 | INFO     | chi2: 0.9141695514329451
[2025-06-05 15:38:51] 2025-06-05 13:25:53,759 | INFO     | current chi2=0.9141695514329451 (change=1.3814213399020245 %)
[2025-06-05 15:38:51] 2025-06-05 13:25:53,759 | INFO     | left removable region: 30
[2025-06-05 15:38:51] 2025-06-05 13:25:53,759 | INFO     | sum of square deviations: 4340323240.0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,761 | INFO     | sum of deviations: 6918829596.000001
[2025-06-05 15:38:51] 2025-06-05 13:25:53,761 | INFO     | mean x: 1749122161.0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,761 | INFO     | mean y: 2504382.755186722
[2025-06-05 15:38:51] 2025-06-05 13:25:53,761 | INFO     | -- intersect: -2785739143.2146163
[2025-06-05 15:38:51] 2025-06-05 13:25:53,761 | INFO     | intersect: -2785739143.2146163
[2025-06-05 15:38:51] 2025-06-05 13:25:53,762 | INFO     | chi2: 0.013517099453083936
[2025-06-05 15:38:51] 2025-06-05 13:25:53,762 | INFO     | -- intersect: -2785739143.2146163
[2025-06-05 15:38:51] 2025-06-05 13:25:53,762 | INFO     | current memory leak: 1.59 B/s (using 241 data points, chi2=0.01)
[2025-06-05 15:38:51] 2025-06-05 13:25:53,763 | INFO     | ..............................
[2025-06-05 15:38:51] 2025-06-05 13:25:53,763 | INFO     | . Timing measurements:
[2025-06-05 15:38:51] 2025-06-05 13:25:53,763 | INFO     | . get job = 0 s
[2025-06-05 15:38:51] 2025-06-05 13:25:53,763 | INFO     | . initial setup = 10 s
[2025-06-05 15:38:51] 2025-06-05 13:25:53,763 | INFO     | . payload setup = 190 s
[2025-06-05 15:38:51] 2025-06-05 13:25:53,763 | INFO     | . stage-in = 0 s
[2025-06-05 15:38:51] 2025-06-05 13:25:53,763 | INFO     | . payload execution = 16986 s
[2025-06-05 15:38:51] 2025-06-05 13:25:53,763 | INFO     | . stage-out = 6 s
[2025-06-05 15:38:51] 2025-06-05 13:25:53,763 | INFO     | . log creation = 1 s
[2025-06-05 15:38:51] 2025-06-05 13:25:53,764 | INFO     | ..............................
[2025-06-05 15:38:51] 2025-06-05 13:25:53,891 | INFO     | 
[2025-06-05 15:38:51] 2025-06-05 13:25:53,892 | INFO     | job summary report
[2025-06-05 15:38:51] 2025-06-05 13:25:53,892 | INFO     | --------------------------------------------------
[2025-06-05 15:38:51] 2025-06-05 13:25:53,892 | INFO     | PanDA job id: 6667364861
[2025-06-05 15:38:51] 2025-06-05 13:25:53,892 | INFO     | task id: 44871837
[2025-06-05 15:38:51] 2025-06-05 13:25:53,892 | INFO     | errors: (none)
[2025-06-05 15:38:51] 2025-06-05 13:25:53,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:38:51] 2025-06-05 13:25:53,892 | INFO     | pilot state: finished 
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | transexitcode: 0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | exeerrorcode: 0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | exeerrordiag: 
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | exitcode: 0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | exitmsg: OK
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | cpuconsumptiontime: 63913 s
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | nevents: 400
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | neventsw: 0
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | pid: 29401
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | pgrp: 29401
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | corecount: 8
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | event service: False
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | sizes: {0: 2396564, 1: 2397250, 2: 2397449, 13: 2397449, 23: 2397505, 34: 2397533, 45: 2397689, 56: 2397717, 66: 2397745, 77: 2397773, 88: 2397829, 93: 2398343, 98
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | --------------------------------------------------
[2025-06-05 15:38:51] 2025-06-05 13:25:53,893 | INFO     | 
[2025-06-05 15:38:51] 2025-06-05 13:25:53,894 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-06-05 15:38:51] 2025-06-05 13:25:54,271 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,272 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,272 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,272 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,272 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,273 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,273 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,273 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,273 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:38:51] 2025-06-05 13:25:54,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:38:51] 2025-06-05 13:25:54,273 | INFO     | job 6667364861 has completed (purged errors)
[2025-06-05 15:38:51] 2025-06-05 13:25:54,273 | INFO     | overall cleanup function is called
[2025-06-05 15:38:51] 2025-06-05 13:25:55,282 | INFO     | --- collectZombieJob: --- 10, [29401]
[2025-06-05 15:38:51] 2025-06-05 13:25:55,282 | INFO     | zombie collector waiting for pid 29401
[2025-06-05 15:38:51] 2025-06-05 13:25:55,282 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:38:51] 2025-06-05 13:25:55,282 | INFO     | collected zombie processes
[2025-06-05 15:38:51] 2025-06-05 13:25:55,282 | INFO     | will attempt to kill all subprocesses of pid=29401
[2025-06-05 15:38:51] 2025-06-05 13:25:55,394 | INFO     | process IDs to be killed: [29401] (in reverse order)
[2025-06-05 15:38:51] 2025-06-05 13:25:56,339 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:38:51] 2025-06-05 13:25:56,339 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:38:51] 2025-06-05 13:25:56,353 | INFO     | did not find any defunct processes belonging to 29401
[2025-06-05 15:38:51] 2025-06-05 13:25:56,357 | INFO     | did not find any defunct processes belonging to 29401
[2025-06-05 15:38:51] 2025-06-05 13:25:56,357 | INFO     | ready for new job
[2025-06-05 15:38:51] 2025-06-05 13:25:56,357 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:38:51] 2025-06-05 13:25:56,359 | INFO     | **************************************
[2025-06-05 15:38:51] 2025-06-05 13:25:56,359 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:38:51] 2025-06-05 13:25:56,359 | INFO     | **************************************
[2025-06-05 15:38:51] 2025-06-05 13:25:56,360 | INFO     | 
[2025-06-05 15:38:51] 2025-06-05 13:25:56,360 | INFO     | pilot is running in a VM
[2025-06-05 15:38:51] 2025-06-05 13:25:56,360 | INFO     | architecture information:
[2025-06-05 15:38:51] 2025-06-05 13:25:56,370 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:38:51] 2025-06-05 13:25:56,497 | INFO     | cat /etc/os-release:
[2025-06-05 15:38:51] NAME="CentOS Linux"
[2025-06-05 15:38:51] VERSION="7 (Core)"
[2025-06-05 15:38:51] ID="centos"
[2025-06-05 15:38:51] ID_LIKE="rhel fedora"
[2025-06-05 15:38:51] VERSION_ID="7"
[2025-06-05 15:38:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:38:51] ANSI_COLOR="0;31"
[2025-06-05 15:38:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:38:51] HOME_URL="https://www.centos.org/"
[2025-06-05 15:38:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:38:51] 
[2025-06-05 15:38:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:38:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:38:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:38:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:38:51] 
[2025-06-05 15:38:51] 2025-06-05 13:25:56,498 | INFO     | **************************************
[2025-06-05 15:38:51] 2025-06-05 13:25:57,001 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-06-05 15:38:51] 2025-06-05 13:25:57,163 | INFO     | sufficient remaining disk space (496399024128 B)
[2025-06-05 15:38:51] 2025-06-05 13:25:57,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:38:51] 2025-06-05 13:25:57,163 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:38:51] 2025-06-05 13:25:57,163 | INFO     | update_server=False
[2025-06-05 15:38:51] 2025-06-05 13:25:57,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:38:51] 2025-06-05 13:25:57,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:38:51] 2025-06-05 13:25:57,165 | INFO     | aborting loop
[2025-06-05 15:38:51] 2025-06-05 13:25:57,447 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:38:51] 2025-06-05 13:25:57,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:38:51] 2025-06-05 13:25:57,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:38:51] 2025-06-05 13:25:57,489 | INFO     | all data control threads have been joined
[2025-06-05 15:38:51] 2025-06-05 13:25:57,760 | INFO     | all payload control threads have been joined
[2025-06-05 15:38:51] 2025-06-05 13:25:58,048 | INFO     | all job control threads have been joined
[2025-06-05 15:38:51] 2025-06-05 13:25:58,170 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:25:58,171 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:25:58,212 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:25:58,496 | INFO     | [data] control thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:25:58,519 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:38:51] 2025-06-05 13:25:58,677 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:25:58,680 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:25:58,766 | INFO     | [payload] control thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:25:58,811 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:25:58,840 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:25:58,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:38:51] 2025-06-05 13:25:59,054 | INFO     | [job] control thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:25:59,417 | INFO     | [job] validate thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:25:59,536 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:25:59,612 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:25:59,662 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:38:51] 2025-06-05 13:25:59,912 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:26:00,526 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:26:03,671 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:38:51] 2025-06-05 13:26:05,212 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139859807352640)>', '<ExcThread(monitor, started 139859192686336)>']
[2025-06-05 15:38:51] 2025-06-05 13:26:05,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:38:51] 2025-06-05 13:26:05,496 | INFO     | [monitor] control thread has ended
[2025-06-05 15:38:51] 2025-06-05 13:26:10,237 | INFO     | all workflow threads have been joined
[2025-06-05 15:38:51] 2025-06-05 13:26:10,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:38:51] 2025-06-05 13:26:10,237 | INFO     | traces error code: 0
[2025-06-05 15:38:51] 2025-06-05 13:26:10,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:38:51] 2025-06-05 13:26:10,663 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:38:51] 2025-06-05 13:26:10,753 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:38:51] 2025-06-05 13:26:10,845 [wrapper] pilotpid: 20805
[2025-06-05 15:38:51] 2025-06-05 13:26:10,896 [wrapper] Pilot exit status: 0
[2025-06-05 15:38:51] 2025-06-05 13:26:11,316 [wrapper] pandaids: 6667364861
[2025-06-05 15:38:51] 2025-06-05 13:26:11,997 [wrapper] cleanup supervisor_pilot 15358 20806
[2025-06-05 15:38:51] 2025-06-05 13:26:12,003 [wrapper] Test setup, not cleaning
[2025-06-05 15:38:51] 2025-06-05 13:26:12,091 [wrapper] apfmon messages muted
[2025-06-05 15:38:51] 2025-06-05 13:26:12,136 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:38:51] 2025-06-05 13:26:12,215 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:38:51]  *** Error codes and diagnostics ***
[2025-06-05 15:38:51]     "exeErrorCode": 0,
[2025-06-05 15:38:51]     "exeErrorDiag": "",
[2025-06-05 15:38:51]     "pilotErrorCode": 0,
[2025-06-05 15:38:51]     "pilotErrorDiag": "",
[2025-06-05 15:38:51]  *** Listing of results directory ***
[2025-06-05 15:38:51] total 416244
[2025-06-05 15:38:51] -rw-r--r--. 1 boinc boinc    495897 May 27 18:39 pilot3.tar.gz
[2025-06-05 15:38:51] -rw-r--r--. 1 boinc boinc      5111 May 27 19:10 queuedata.json
[2025-06-05 15:38:51] -rwx------. 1 boinc boinc     37140 May 27 19:15 runpilot2-wrapper.sh
[2025-06-05 15:38:51] -rw-r--r--. 1 boinc boinc       100 Jun  5 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:38:51] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 10:30 run_atlas
[2025-06-05 15:38:51] -rw-r--r--. 1 boinc boinc       105 Jun  5 10:30 job.xml
[2025-06-05 15:38:51] -rw-r--r--. 1 boinc boinc      6393 Jun  5 10:30 init_data.xml
[2025-06-05 15:38:51] -rw-r--r--. 2 boinc boinc 222777950 Jun  5 10:30 EVNT.44871834._002779.pool.root.1
[2025-06-05 15:38:51] drwxrwx--x. 2 boinc boinc        68 Jun  5 10:30 shared
[2025-06-05 15:38:51] -rw-r--r--. 2 boinc boinc    508874 Jun  5 10:30 input.tar.gz
[2025-06-05 15:38:51] -rw-r--r--. 2 boinc boinc     15093 Jun  5 10:30 start_atlas.sh
[2025-06-05 15:38:51] -rw-r--r--. 1 boinc boinc         0 Jun  5 10:30 boinc_lockfile
[2025-06-05 15:38:51] -rw-r--r--. 1 boinc boinc      2559 Jun  5 10:31 pandaJob.out
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc    983281 Jun  5 10:34 agis_schedconf.cvmfs.json
[2025-06-05 15:38:51] drwx------. 4 boinc boinc      4096 Jun  5 10:34 pilot3
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc 195864361 Jun  5 15:22 HITS.44871837._070746.pool.root.1
[2025-06-05 15:38:51] -rw-r--r--. 1 boinc boinc       531 Jun  5 15:23 boinc_task_state.xml
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc      1016 Jun  5 15:24 memory_monitor_summary.json
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc   1598969 Jun  5 15:24 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc    402912 Jun  5 15:24 log.44871837._070746.job.log.tgz.1
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc        95 Jun  5 15:25 pilot_heartbeat.json
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc      7692 Jun  5 15:25 heartbeat.json
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc      4417 Jun  5 15:26 pilotlog.txt
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc   1484251 Jun  5 15:26 log.44871837._070746.job.log.1
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc       357 Jun  5 15:26 output.list
[2025-06-05 15:38:51] -rw-r--r--. 1 boinc boinc       620 Jun  5 15:26 runtime_log
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc   1904640 Jun  5 15:26 result.tar.gz
[2025-06-05 15:38:51] -rw-r--r--. 1 boinc boinc      8673 Jun  5 15:26 runtime_log.err
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc       656 Jun  5 15:26 by0LDmN4Ce7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPxZKDm3gTMhn.diag
[2025-06-05 15:38:51] -rw-r--r--. 1 boinc boinc      8192 Jun  5 15:38 boinc_mmap_file
[2025-06-05 15:38:51] -rw-r--r--. 1 boinc boinc        28 Jun  5 15:38 wrapper_checkpoint.txt
[2025-06-05 15:38:51] -rw-r--r--. 1 boinc boinc     20531 Jun  5 15:38 stderr.txt
[2025-06-05 15:38:51] HITS file was successfully produced:
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc 195864361 Jun  5 15:22 shared/HITS.pool.root.1
[2025-06-05 15:38:51]  *** Contents of shared directory: ***
[2025-06-05 15:38:51] total 411212
[2025-06-05 15:38:51] -rw-r--r--. 2 boinc boinc 222777950 Jun  5 10:30 ATLAS.root_0
[2025-06-05 15:38:51] -rw-r--r--. 2 boinc boinc    508874 Jun  5 10:30 input.tar.gz
[2025-06-05 15:38:51] -rw-r--r--. 2 boinc boinc     15093 Jun  5 10:30 start_atlas.sh
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc 195864361 Jun  5 15:22 HITS.pool.root.1
[2025-06-05 15:38:51] -rw-------. 1 boinc boinc   1904640 Jun  5 15:26 result.tar.gz
15:38:53 (14589): run_atlas exited; CPU time 64128.107775
15:38:53 (14589): called boinc_finish(0)

</stderr_txt>
]]>

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