Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:10:08 (1675): wrapper (7.7.26015): starting
19:10:08 (1675): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 19:10:08] Arguments: --nthreads 12
[2025-06-04 19:10:08] Threads: 12
[2025-06-04 19:10:08] Checking for CVMFS
[2025-06-04 19:10:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:10:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:10:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:10:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:10:09] 2.11.2.0 2981 36277 86852 146797 1 56 19153493 20275201 1 130560 0 17138656 99.983 6922615 8195 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 19:10:09] CVMFS is ok
[2025-06-04 19:10:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:10:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:10:09] Further information can be found at the LHC@home message board.
[2025-06-04 19:10:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:10:09] Checking for apptainer binary...
[2025-06-04 19:10:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:10:09] Running /usr/bin/apptainer --version
[2025-06-04 19:10:09] apptainer version 1.3.2-1.el7
[2025-06-04 19:10:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:10:10] c-205-30.aglt2.org
[2025-06-04 19:10:10] apptainer works
[2025-06-04 19:10:10] Set ATHENA_PROC_NUMBER=12
[2025-06-04 19:10:10] Set ATHENA_CORE_NUMBER=12
[2025-06-04 19:10:10] Starting ATLAS job with PandaID=6668863141
[2025-06-04 19:10:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:44:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:44:46]  replicas=None
[2025-06-04 20:44:46]  scope=mc23_13p6TeV
[2025-06-04 20:44:46]  status=None
[2025-06-04 20:44:46]  status_code=0
[2025-06-04 20:44:46]  storage_token=
[2025-06-04 20:44:46]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668863141/log.44871837._089835.job.log.tgz.1
[2025-06-04 20:44:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/4f/log.44871837._089835.job.log.tgz.1
[2025-06-04 20:44:46]  workdir=None
[2025-06-04 20:44:46] ]
[2025-06-04 20:44:46] 2025-06-05 00:44:15,973 | INFO     | transferring file log.44871837._089835.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668863141/log.44871837._089835.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 20:44:46] 2025-06-05 00:44:15,974 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668863141/log.44871837._089835.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._089835.job
[2025-06-04 20:44:46] 2025-06-05 00:44:15,995 | INFO     | adding to output.list: log.44871837._089835.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/4f/log.44871837._089835.job.log.tg
[2025-06-04 20:44:46] 2025-06-05 00:44:15,996 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 20:44:46] 2025-06-05 00:44:15,996 | INFO     | summary of transferred files:
[2025-06-04 20:44:46] 2025-06-05 00:44:15,996 | INFO     |  -- lfn=log.44871837._089835.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 20:44:46] 2025-06-05 00:44:15,997 | INFO     | stage-out finished correctly
[2025-06-04 20:44:46] 2025-06-05 00:44:16,255 | INFO     | monitor loop #420: job 0:6668863141 is in state 'finished'
[2025-06-04 20:44:46] 2025-06-05 00:44:16,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:44:46] 2025-06-05 00:44:18,758 | INFO     | monitor loop #421: job 0:6668863141 is in state 'finished'
[2025-06-04 20:44:46] 2025-06-05 00:44:18,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:44:46] 2025-06-05 00:44:18,986 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 20:44:46] 2025-06-05 00:44:21,261 | INFO     | monitor loop #422: job 0:6668863141 is in state 'finished'
[2025-06-04 20:44:46] 2025-06-05 00:44:21,262 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:44:46] 2025-06-05 00:44:21,755 | INFO     | job 6668863141 has state=finished
[2025-06-04 20:44:46] 2025-06-05 00:44:21,755 | INFO     | preparing for final server update for job 6668863141 in state='finished'
[2025-06-04 20:44:46] 2025-06-05 00:44:21,756 | INFO     | this job has now completed (state=finished)
[2025-06-04 20:44:46] 2025-06-05 00:44:21,756 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 20:44:46] 2025-06-05 00:44:21,756 | INFO     | log transfer has been attempted: DONE
[2025-06-04 20:44:46] 2025-06-05 00:44:21,756 | INFO     | job 6668863141 has finished - writing final server update
[2025-06-04 20:44:46] 2025-06-05 00:44:21,757 | INFO     | total number of processed events: 400 (read)
[2025-06-04 20:44:46] 2025-06-05 00:44:21,758 | INFO     | executing command: lscpu
[2025-06-04 20:44:46] 2025-06-05 00:44:21,785 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 20:44:46] 2025-06-05 00:44:23,634 | INFO     | PID=5397 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 20:44:46] 2025-06-05 00:44:23,765 | INFO     | monitor loop #423: job 0:6668863141 is in state 'finished'
[2025-06-04 20:44:46] 2025-06-05 00:44:23,765 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:44:46] 2025-06-05 00:44:26,268 | INFO     | monitor loop #424: job 0:6668863141 is in state 'finished'
[2025-06-04 20:44:46] 2025-06-05 00:44:26,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:44:46] 2025-06-05 00:44:26,381 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 20:44:46] 2025-06-05 00:44:26,382 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668863141/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:44:46] 2025-06-05 00:44:26,383 | INFO     | extracted standard info from prmon json
[2025-06-04 20:44:46] 2025-06-05 00:44:26,383 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:44:46] 2025-06-05 00:44:26,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:44:46] 2025-06-05 00:44:26,383 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:44:46] 2025-06-05 00:44:26,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:44:46] 2025-06-05 00:44:26,386 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:44:46] 2025-06-05 00:44:26,387 | INFO     | sum of square deviations: 190403570.0
[2025-06-04 20:44:46] 2025-06-05 00:44:26,387 | INFO     | sum of deviations: 865560232.0000001
[2025-06-04 20:44:46] 2025-06-05 00:44:26,388 | INFO     | mean x: 1749081522.0
[2025-06-04 20:44:46] 2025-06-05 00:44:26,388 | INFO     | mean y: 2705204.694117647
[2025-06-04 20:44:46] 2025-06-05 00:44:26,388 | INFO     | -- intersect: -7948487138.85928
[2025-06-04 20:44:46] 2025-06-05 00:44:26,388 | INFO     | intersect: -7948487138.85928
[2025-06-04 20:44:46] 2025-06-05 00:44:26,388 | INFO     | chi2: 0.05473227079638381
[2025-06-04 20:44:46] 2025-06-05 00:44:26,389 | INFO     | -- intersect: -7948487138.85928
[2025-06-04 20:44:46] 2025-06-05 00:44:26,389 | INFO     | current memory leak: 4.55 B/s (using 85 data points, chi2=0.05)
[2025-06-04 20:44:46] 2025-06-05 00:44:26,389 | INFO     | ..............................
[2025-06-04 20:44:46] 2025-06-05 00:44:26,390 | INFO     | . Timing measurements:
[2025-06-04 20:44:46] 2025-06-05 00:44:26,390 | INFO     | . get job = 0 s
[2025-06-04 20:44:46] 2025-06-05 00:44:26,390 | INFO     | . initial setup = 3 s
[2025-06-04 20:44:46] 2025-06-05 00:44:26,390 | INFO     | . payload setup = 9 s
[2025-06-04 20:44:46] 2025-06-05 00:44:26,390 | INFO     | . stage-in = 0 s
[2025-06-04 20:44:46] 2025-06-05 00:44:26,390 | INFO     | . payload execution = 5600 s
[2025-06-04 20:44:46] 2025-06-05 00:44:26,390 | INFO     | . stage-out = 0 s
[2025-06-04 20:44:46] 2025-06-05 00:44:26,390 | INFO     | . log creation = 0 s
[2025-06-04 20:44:46] 2025-06-05 00:44:26,390 | INFO     | ..............................
[2025-06-04 20:44:46] 2025-06-05 00:44:26,578 | INFO     | 
[2025-06-04 20:44:46] 2025-06-05 00:44:26,579 | INFO     | job summary report
[2025-06-04 20:44:46] 2025-06-05 00:44:26,579 | INFO     | --------------------------------------------------
[2025-06-04 20:44:46] 2025-06-05 00:44:26,579 | INFO     | PanDA job id: 6668863141
[2025-06-04 20:44:46] 2025-06-05 00:44:26,579 | INFO     | task id: 44871837
[2025-06-04 20:44:46] 2025-06-05 00:44:26,579 | INFO     | errors: (none)
[2025-06-04 20:44:46] 2025-06-05 00:44:26,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:44:46] 2025-06-05 00:44:26,580 | INFO     | pilot state: finished 
[2025-06-04 20:44:46] 2025-06-05 00:44:26,580 | INFO     | transexitcode: 0
[2025-06-04 20:44:46] 2025-06-05 00:44:26,580 | INFO     | exeerrorcode: 0
[2025-06-04 20:44:46] 2025-06-05 00:44:26,580 | INFO     | exeerrordiag: 
[2025-06-04 20:44:46] 2025-06-05 00:44:26,580 | INFO     | exitcode: 0
[2025-06-04 20:44:46] 2025-06-05 00:44:26,580 | INFO     | exitmsg: OK
[2025-06-04 20:44:46] 2025-06-05 00:44:26,580 | INFO     | cpuconsumptiontime: 60237 s
[2025-06-04 20:44:46] 2025-06-05 00:44:26,580 | INFO     | nevents: 400
[2025-06-04 20:44:46] 2025-06-05 00:44:26,581 | INFO     | neventsw: 0
[2025-06-04 20:44:46] 2025-06-05 00:44:26,581 | INFO     | pid: 11808
[2025-06-04 20:44:46] 2025-06-05 00:44:26,581 | INFO     | pgrp: 11808
[2025-06-04 20:44:46] 2025-06-05 00:44:26,581 | INFO     | corecount: 12
[2025-06-04 20:44:46] 2025-06-05 00:44:26,581 | INFO     | event service: False
[2025-06-04 20:44:46] 2025-06-05 00:44:26,581 | INFO     | sizes: {0: 2397221, 1: 2397420, 6: 2397626, 12: 2397654, 5614: 2424098, 5616: 2433039, 5619: 2433223, 5627: 2433393}
[2025-06-04 20:44:46] 2025-06-05 00:44:26,581 | INFO     | --------------------------------------------------
[2025-06-04 20:44:46] 2025-06-05 00:44:26,581 | INFO     | 
[2025-06-04 20:44:46] 2025-06-05 00:44:26,581 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 20:44:46] 2025-06-05 00:44:26,603 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,604 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,604 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,604 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,604 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,605 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,605 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,605 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,605 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,605 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,605 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,607 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:44:46] 2025-06-05 00:44:26,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,607 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:44:46] 2025-06-05 00:44:26,607 | INFO     | job 6668863141 has completed (purged errors)
[2025-06-04 20:44:46] 2025-06-05 00:44:26,607 | INFO     | overall cleanup function is called
[2025-06-04 20:44:46] 2025-06-05 00:44:27,616 | INFO     | --- collectZombieJob: --- 10, [11808]
[2025-06-04 20:44:46] 2025-06-05 00:44:27,616 | INFO     | zombie collector waiting for pid 11808
[2025-06-04 20:44:46] 2025-06-05 00:44:27,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:44:46] 2025-06-05 00:44:27,616 | INFO     | collected zombie processes
[2025-06-04 20:44:46] 2025-06-05 00:44:27,616 | INFO     | will attempt to kill all subprocesses of pid=11808
[2025-06-04 20:44:46] 2025-06-05 00:44:27,707 | INFO     | process IDs to be killed: [11808] (in reverse order)
[2025-06-04 20:44:46] 2025-06-05 00:44:27,756 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:44:46] 2025-06-05 00:44:27,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:44:46] 2025-06-05 00:44:27,760 | INFO     | did not find any defunct processes belonging to 11808
[2025-06-04 20:44:46] 2025-06-05 00:44:27,762 | INFO     | did not find any defunct processes belonging to 11808
[2025-06-04 20:44:46] 2025-06-05 00:44:27,762 | INFO     | ready for new job
[2025-06-04 20:44:46] 2025-06-05 00:44:27,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:44:46] 2025-06-05 00:44:27,763 | INFO     | **************************************
[2025-06-04 20:44:46] 2025-06-05 00:44:27,763 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:44:46] 2025-06-05 00:44:27,764 | INFO     | **************************************
[2025-06-04 20:44:46] 2025-06-05 00:44:27,764 | INFO     | 
[2025-06-04 20:44:46] 2025-06-05 00:44:27,764 | INFO     | architecture information:
[2025-06-04 20:44:46] 2025-06-05 00:44:27,765 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:44:46] 2025-06-05 00:44:27,778 | INFO     | cat /etc/os-release:
[2025-06-04 20:44:46] NAME="CentOS Linux"
[2025-06-04 20:44:46] VERSION="7 (Core)"
[2025-06-04 20:44:46] ID="centos"
[2025-06-04 20:44:46] ID_LIKE="rhel fedora"
[2025-06-04 20:44:46] VERSION_ID="7"
[2025-06-04 20:44:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:44:46] ANSI_COLOR="0;31"
[2025-06-04 20:44:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:44:46] HOME_URL="https://www.centos.org/"
[2025-06-04 20:44:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:44:46] 
[2025-06-04 20:44:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:44:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:44:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:44:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:44:46] 
[2025-06-04 20:44:46] 2025-06-05 00:44:27,778 | INFO     | **************************************
[2025-06-04 20:44:46] 2025-06-05 00:44:28,281 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 20:44:46] 2025-06-05 00:44:28,297 | INFO     | sufficient remaining disk space (29380050944 B)
[2025-06-04 20:44:46] 2025-06-05 00:44:28,297 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:44:46] 2025-06-05 00:44:28,297 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:44:46] 2025-06-05 00:44:28,297 | INFO     | update_server=False
[2025-06-04 20:44:46] 2025-06-05 00:44:28,298 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:44:46] 2025-06-05 00:44:28,298 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:44:46] 2025-06-05 00:44:28,298 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 20:44:46] 2025-06-05 00:44:28,299 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:44:46] 2025-06-05 00:44:28,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:44:46] 2025-06-05 00:44:28,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:44:46] 2025-06-05 00:44:28,313 | INFO     | all job control threads have been joined
[2025-06-04 20:44:46] 2025-06-05 00:44:28,477 | INFO     | all payload control threads have been joined
[2025-06-04 20:44:46] 2025-06-05 00:44:28,781 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 20:44:46] 2025-06-05 00:44:28,782 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 20:44:46] 2025-06-05 00:44:28,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:44:46] 2025-06-05 00:44:28,782 | INFO     | will abort loop
[2025-06-04 20:44:46] 2025-06-05 00:44:29,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:44:46] 2025-06-05 00:44:29,249 | INFO     | all data control threads have been joined
[2025-06-04 20:44:46] 2025-06-05 00:44:29,303 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:29,304 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:29,316 | INFO     | [job] control thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:29,377 | INFO     | [job] validate thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:29,437 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:29,482 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:29,483 | INFO     | [payload] control thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:29,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:44:46] 2025-06-05 00:44:29,631 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:29,787 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:29,910 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:29,935 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:30,095 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:30,255 | INFO     | [data] control thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:31,107 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:33,583 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:38,749 | INFO     | job.realtimelogging is not enabled
[2025-06-04 20:44:46] 2025-06-05 00:44:39,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:44:46] 2025-06-05 00:44:41,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139694523561792)>', '<ExcThread(monitor, started 139693266036480)>']
[2025-06-04 20:44:46] 2025-06-05 00:44:42,369 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:44:46] 2025-06-05 00:44:42,369 | INFO     | [monitor] control thread has ended
[2025-06-04 20:44:46] 2025-06-05 00:44:46,449 | INFO     | all workflow threads have been joined
[2025-06-04 20:44:46] 2025-06-05 00:44:46,449 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:44:46] 2025-06-05 00:44:46,450 | INFO     | traces error code: 0
[2025-06-04 20:44:46] 2025-06-05 00:44:46,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:44:46] 2025-06-05 00:44:46,551 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:44:46] 2025-06-05 00:44:46,554 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:44:46] 2025-06-05 00:44:46,558 [wrapper] pilotpid: 5397
[2025-06-04 20:44:46] 2025-06-05 00:44:46,561 [wrapper] Pilot exit status: 0
[2025-06-04 20:44:46] 2025-06-05 00:44:46,575 [wrapper] pandaids: 6668863141
[2025-06-04 20:44:46] 2025-06-05 00:44:46,615 [wrapper] cleanup supervisor_pilot 16713 5398
[2025-06-04 20:44:46] 2025-06-05 00:44:46,619 [wrapper] Test setup, not cleaning
[2025-06-04 20:44:46] 2025-06-05 00:44:46,623 [wrapper] apfmon messages muted
[2025-06-04 20:44:46] 2025-06-05 00:44:46,626 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:44:46] 2025-06-05 00:44:46,630 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:44:46]  *** Error codes and diagnostics ***
[2025-06-04 20:44:46]     "exeErrorCode": 0,
[2025-06-04 20:44:46]     "exeErrorDiag": "",
[2025-06-04 20:44:46]     "pilotErrorCode": 0,
[2025-06-04 20:44:46]     "pilotErrorDiag": "",
[2025-06-04 20:44:46]  *** Listing of results directory ***
[2025-06-04 20:44:46] total 415652
[2025-06-04 20:44:46] -rw-r--r-- 1 boincer umatlas    495897 May 28 15:50 pilot3.tar.gz
[2025-06-04 20:44:46] -rw-r--r-- 1 boincer umatlas      5111 May 28 16:01 queuedata.json
[2025-06-04 20:44:46] -rwx------ 1 boincer umatlas     37140 May 28 16:01 runpilot2-wrapper.sh
[2025-06-04 20:44:46] -rw-r--r-- 1 boincer umatlas       100 Jun  4 19:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:44:46] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 19:10 run_atlas
[2025-06-04 20:44:46] -rw-r--r-- 1 boincer umatlas       105 Jun  4 19:10 job.xml
[2025-06-04 20:44:46] -rw-r--r-- 2 boincer umatlas 225175414 Jun  4 19:10 EVNT.44871834._003495.pool.root.1
[2025-06-04 20:44:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:10 start_atlas.sh
[2025-06-04 20:44:46] drwxrwx--x 2 boincer umatlas      4096 Jun  4 19:10 shared
[2025-06-04 20:44:46] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 19:10 input.tar.gz
[2025-06-04 20:44:46] -rw-r--r-- 1 boincer umatlas         0 Jun  4 19:10 boinc_lockfile
[2025-06-04 20:44:46] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 19:10 pandaJob.out
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas    987032 Jun  4 19:10 agis_schedconf.cvmfs.json
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas   1598969 Jun  4 19:10 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:44:46] drwx------ 4 boincer umatlas      4096 Jun  4 19:10 pilot3
[2025-06-04 20:44:46] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 20:39 init_data.xml
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas        95 Jun  4 20:43 pilot_heartbeat.json
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas 194792477 Jun  4 20:43 HITS.44871837._089835.pool.root.1
[2025-06-04 20:44:46] -rw-r--r-- 1 boincer umatlas       529 Jun  4 20:44 boinc_task_state.xml
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas      1059 Jun  4 20:44 memory_monitor_summary.json
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas    384959 Jun  4 20:44 log.44871837._089835.job.log.tgz.1
[2025-06-04 20:44:46] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 20:44 boinc_mmap_file
[2025-06-04 20:44:46] -rw-r--r-- 1 boincer umatlas        27 Jun  4 20:44 wrapper_checkpoint.txt
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas      7746 Jun  4 20:44 heartbeat.json
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas      4734 Jun  4 20:44 pilotlog.txt
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas    529225 Jun  4 20:44 log.44871837._089835.job.log.1
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas       357 Jun  4 20:44 output.list
[2025-06-04 20:44:46] -rw-r--r-- 1 boincer umatlas       620 Jun  4 20:44 runtime_log
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas    931840 Jun  4 20:44 result.tar.gz
[2025-06-04 20:44:46] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 20:44 runtime_log.err
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas       659 Jun  4 20:44 hSeNDmP9be7n9Rq4apOajLDm4fhM0noT9bVof3QYDmP4TKDmHL0Yzn.diag
[2025-06-04 20:44:46] -rw-r--r-- 1 boincer umatlas     21867 Jun  4 20:44 stderr.txt
[2025-06-04 20:44:46] HITS file was successfully produced:
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas 194792477 Jun  4 20:43 shared/HITS.pool.root.1
[2025-06-04 20:44:46]  *** Contents of shared directory: ***
[2025-06-04 20:44:46] total 411564
[2025-06-04 20:44:46] -rw-r--r-- 2 boincer umatlas 225175414 Jun  4 19:10 ATLAS.root_0
[2025-06-04 20:44:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:10 start_atlas.sh
[2025-06-04 20:44:46] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 19:10 input.tar.gz
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas 194792477 Jun  4 20:43 HITS.pool.root.1
[2025-06-04 20:44:46] -rw------- 1 boincer umatlas    931840 Jun  4 20:44 result.tar.gz
20:44:48 (1675): run_atlas exited; CPU time 60213.331962
20:44:48 (1675): called boinc_finish(0)

</stderr_txt>
]]>

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