Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:01:49 (31452): wrapper (7.7.26015): starting
19:01:49 (31452): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 19:01:49] Arguments: --nthreads 8
[2025-06-04 19:01:49] Threads: 8
[2025-06-04 19:01:49] Checking for CVMFS
[2025-06-04 19:01:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:01:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:01:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:01:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:01:50] 2.11.2.0 2838 36154 73880 146797 3 55 18143265 20275200 1 130560 0 12611749 99.982 6390461 7646 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 19:01:50] CVMFS is ok
[2025-06-04 19:01:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:01:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:01:50] Further information can be found at the LHC@home message board.
[2025-06-04 19:01:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:01:50] Checking for apptainer binary...
[2025-06-04 19:01:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:01:50] Running /usr/bin/apptainer --version
[2025-06-04 19:01:50] apptainer version 1.3.2-1.el7
[2025-06-04 19:01:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:01:52] c-204-2.aglt2.org
[2025-06-04 19:01:52] apptainer works
[2025-06-04 19:01:52] Set ATHENA_PROC_NUMBER=8
[2025-06-04 19:01:52] Set ATHENA_CORE_NUMBER=8
[2025-06-04 19:01:52] Starting ATLAS job with PandaID=6668440314
[2025-06-04 19:01:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:46:31]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:46:31] 2025-06-05 01:46:09,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:46:31] 2025-06-05 01:46:09,964 | INFO     | PID=3281 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 21:46:31] 2025-06-05 01:46:12,336 | INFO     | monitor loop #736: job 0:6668440314 is in state 'finished'
[2025-06-04 21:46:31] 2025-06-05 01:46:12,336 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:46:31] 2025-06-05 01:46:12,618 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 21:46:31] 2025-06-05 01:46:12,619 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668440314/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:46:31] 2025-06-05 01:46:12,620 | INFO     | extracted standard info from prmon json
[2025-06-04 21:46:31] 2025-06-05 01:46:12,620 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:46:31] 2025-06-05 01:46:12,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:46:31] 2025-06-05 01:46:12,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:46:31] 2025-06-05 01:46:12,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:46:31] 2025-06-05 01:46:12,625 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:46:31] 2025-06-05 01:46:12,626 | INFO     | sum of square deviations: 1294014960.0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,627 | INFO     | sum of deviations: 22567222608.999996
[2025-06-04 21:46:31] 2025-06-05 01:46:12,627 | INFO     | mean x: 1749083043.0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,627 | INFO     | mean y: 2483060.5217391304
[2025-06-04 21:46:31] 2025-06-05 01:46:12,628 | INFO     | -- intersect: -30500986847.591312
[2025-06-04 21:46:31] 2025-06-05 01:46:12,628 | INFO     | intersect: -30500986847.591312
[2025-06-04 21:46:31] 2025-06-05 01:46:12,628 | INFO     | chi2: 1.503651934729445
[2025-06-04 21:46:31] 2025-06-05 01:46:12,629 | INFO     | sum of square deviations: 1177156955.0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,630 | INFO     | sum of deviations: 21672174031.500004
[2025-06-04 21:46:31] 2025-06-05 01:46:12,630 | INFO     | mean x: 1749082890.5
[2025-06-04 21:46:31] 2025-06-05 01:46:12,630 | INFO     | mean y: 2481892.108974359
[2025-06-04 21:46:31] 2025-06-05 01:46:12,630 | INFO     | -- intersect: -32199195749.455032
[2025-06-04 21:46:31] 2025-06-05 01:46:12,631 | INFO     | intersect: -32199195749.455032
[2025-06-04 21:46:31] 2025-06-05 01:46:12,631 | INFO     | chi2: 1.5052042641657128
[2025-06-04 21:46:31] 2025-06-05 01:46:12,631 | INFO     | current chi2=1.5052042641657128 (change=-0.10323728519972492 %)
[2025-06-04 21:46:31] 2025-06-05 01:46:12,631 | INFO     | right removable region: 155
[2025-06-04 21:46:31] 2025-06-05 01:46:12,631 | INFO     | sum of square deviations: 1177156955.0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,632 | INFO     | sum of deviations: -1236786071.4999988
[2025-06-04 21:46:31] 2025-06-05 01:46:12,632 | INFO     | mean x: 1749083195.5
[2025-06-04 21:46:31] 2025-06-05 01:46:12,632 | INFO     | mean y: 2513661.262820513
[2025-06-04 21:46:31] 2025-06-05 01:46:12,633 | INFO     | -- intersect: 1840197009.1806087
[2025-06-04 21:46:31] 2025-06-05 01:46:12,633 | INFO     | intersect: 1840197009.1806087
[2025-06-04 21:46:31] 2025-06-05 01:46:12,633 | INFO     | chi2: 0.062271097005668366
[2025-06-04 21:46:31] 2025-06-05 01:46:12,633 | INFO     | current chi2=0.062271097005668366 (change=95.858676096016 %)
[2025-06-04 21:46:31] 2025-06-05 01:46:12,633 | INFO     | sum of square deviations: 1067554900.0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,634 | INFO     | sum of deviations: -807091243.9999996
[2025-06-04 21:46:31] 2025-06-05 01:46:12,634 | INFO     | mean x: 1749083348.0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,634 | INFO     | mean y: 2512989.761589404
[2025-06-04 21:46:31] 2025-06-05 01:46:12,635 | INFO     | -- intersect: 1324852342.2361124
[2025-06-04 21:46:31] 2025-06-05 01:46:12,635 | INFO     | intersect: 1324852342.2361124
[2025-06-04 21:46:31] 2025-06-05 01:46:12,635 | INFO     | chi2: 0.04688466101444033
[2025-06-04 21:46:31] 2025-06-05 01:46:12,635 | INFO     | current chi2=0.04688466101444033 (change=24.70879225048412 %)
[2025-06-04 21:46:31] 2025-06-05 01:46:12,635 | INFO     | left removable region: 20
[2025-06-04 21:46:31] 2025-06-05 01:46:12,636 | INFO     | sum of square deviations: 762879420.0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,636 | INFO     | sum of deviations: 3111025254.0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,636 | INFO     | mean x: 1749083470.0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,636 | INFO     | mean y: 2506202.296296296
[2025-06-04 21:46:31] 2025-06-05 01:46:12,637 | INFO     | -- intersect: -7130263018.983721
[2025-06-04 21:46:31] 2025-06-05 01:46:12,637 | INFO     | intersect: -7130263018.983721
[2025-06-04 21:46:31] 2025-06-05 01:46:12,637 | INFO     | chi2: 0.0009184015928375786
[2025-06-04 21:46:31] 2025-06-05 01:46:12,637 | INFO     | -- intersect: -7130263018.983721
[2025-06-04 21:46:31] 2025-06-05 01:46:12,637 | INFO     | current memory leak: 4.08 B/s (using 135 data points, chi2=0.00)
[2025-06-04 21:46:31] 2025-06-05 01:46:12,638 | INFO     | ..............................
[2025-06-04 21:46:31] 2025-06-05 01:46:12,638 | INFO     | . Timing measurements:
[2025-06-04 21:46:31] 2025-06-05 01:46:12,638 | INFO     | . get job = 0 s
[2025-06-04 21:46:31] 2025-06-05 01:46:12,638 | INFO     | . initial setup = 4 s
[2025-06-04 21:46:31] 2025-06-05 01:46:12,638 | INFO     | . payload setup = 11 s
[2025-06-04 21:46:31] 2025-06-05 01:46:12,638 | INFO     | . stage-in = 0 s
[2025-06-04 21:46:31] 2025-06-05 01:46:12,638 | INFO     | . payload execution = 9800 s
[2025-06-04 21:46:31] 2025-06-05 01:46:12,638 | INFO     | . stage-out = 0 s
[2025-06-04 21:46:31] 2025-06-05 01:46:12,639 | INFO     | . log creation = 0 s
[2025-06-04 21:46:31] 2025-06-05 01:46:12,639 | INFO     | ..............................
[2025-06-04 21:46:31] 2025-06-05 01:46:12,731 | INFO     | 
[2025-06-04 21:46:31] 2025-06-05 01:46:12,732 | INFO     | job summary report
[2025-06-04 21:46:31] 2025-06-05 01:46:12,732 | INFO     | --------------------------------------------------
[2025-06-04 21:46:31] 2025-06-05 01:46:12,732 | INFO     | PanDA job id: 6668440314
[2025-06-04 21:46:31] 2025-06-05 01:46:12,732 | INFO     | task id: 44871837
[2025-06-04 21:46:31] 2025-06-05 01:46:12,732 | INFO     | errors: (none)
[2025-06-04 21:46:31] 2025-06-05 01:46:12,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:46:31] 2025-06-05 01:46:12,732 | INFO     | pilot state: finished 
[2025-06-04 21:46:31] 2025-06-05 01:46:12,732 | INFO     | transexitcode: 0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,733 | INFO     | exeerrorcode: 0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,733 | INFO     | exeerrordiag: 
[2025-06-04 21:46:31] 2025-06-05 01:46:12,733 | INFO     | exitcode: 0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,733 | INFO     | exitmsg: OK
[2025-06-04 21:46:31] 2025-06-05 01:46:12,733 | INFO     | cpuconsumptiontime: 71216 s
[2025-06-04 21:46:31] 2025-06-05 01:46:12,733 | INFO     | nevents: 400
[2025-06-04 21:46:31] 2025-06-05 01:46:12,733 | INFO     | neventsw: 0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,733 | INFO     | pid: 9709
[2025-06-04 21:46:31] 2025-06-05 01:46:12,733 | INFO     | pgrp: 9709
[2025-06-04 21:46:31] 2025-06-05 01:46:12,734 | INFO     | corecount: 8
[2025-06-04 21:46:31] 2025-06-05 01:46:12,734 | INFO     | event service: False
[2025-06-04 21:46:31] 2025-06-05 01:46:12,734 | INFO     | sizes: {0: 2397392, 6: 2397598, 11: 2397626, 9815: 2425969, 9817: 2434966, 9826: 2435080}
[2025-06-04 21:46:31] 2025-06-05 01:46:12,734 | INFO     | --------------------------------------------------
[2025-06-04 21:46:31] 2025-06-05 01:46:12,734 | INFO     | 
[2025-06-04 21:46:31] 2025-06-05 01:46:12,734 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 21:46:31] 2025-06-05 01:46:12,763 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,763 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,764 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,764 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,764 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,764 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,764 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,765 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,765 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,765 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,765 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,765 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,766 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,766 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,766 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,766 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,767 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,767 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:46:31] 2025-06-05 01:46:12,767 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,767 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:46:31] 2025-06-05 01:46:12,767 | INFO     | job 6668440314 has completed (purged errors)
[2025-06-04 21:46:31] 2025-06-05 01:46:12,768 | INFO     | overall cleanup function is called
[2025-06-04 21:46:31] 2025-06-05 01:46:13,775 | INFO     | --- collectZombieJob: --- 10, [9709]
[2025-06-04 21:46:31] 2025-06-05 01:46:13,775 | INFO     | zombie collector waiting for pid 9709
[2025-06-04 21:46:31] 2025-06-05 01:46:13,775 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:46:31] 2025-06-05 01:46:13,776 | INFO     | collected zombie processes
[2025-06-04 21:46:31] 2025-06-05 01:46:13,776 | INFO     | will attempt to kill all subprocesses of pid=9709
[2025-06-04 21:46:31] 2025-06-05 01:46:13,856 | INFO     | process IDs to be killed: [9709] (in reverse order)
[2025-06-04 21:46:31] 2025-06-05 01:46:13,913 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:46:31] 2025-06-05 01:46:13,914 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:46:31] 2025-06-05 01:46:13,918 | INFO     | did not find any defunct processes belonging to 9709
[2025-06-04 21:46:31] 2025-06-05 01:46:13,921 | INFO     | did not find any defunct processes belonging to 9709
[2025-06-04 21:46:31] 2025-06-05 01:46:13,921 | INFO     | ready for new job
[2025-06-04 21:46:31] 2025-06-05 01:46:13,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:46:31] 2025-06-05 01:46:13,924 | INFO     | **************************************
[2025-06-04 21:46:31] 2025-06-05 01:46:13,924 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:46:31] 2025-06-05 01:46:13,924 | INFO     | **************************************
[2025-06-04 21:46:31] 2025-06-05 01:46:13,924 | INFO     | 
[2025-06-04 21:46:31] 2025-06-05 01:46:13,925 | INFO     | architecture information:
[2025-06-04 21:46:31] 2025-06-05 01:46:13,926 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:46:31] 2025-06-05 01:46:13,945 | INFO     | cat /etc/os-release:
[2025-06-04 21:46:31] NAME="CentOS Linux"
[2025-06-04 21:46:31] VERSION="7 (Core)"
[2025-06-04 21:46:31] ID="centos"
[2025-06-04 21:46:31] ID_LIKE="rhel fedora"
[2025-06-04 21:46:31] VERSION_ID="7"
[2025-06-04 21:46:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:46:31] ANSI_COLOR="0;31"
[2025-06-04 21:46:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:46:31] HOME_URL="https://www.centos.org/"
[2025-06-04 21:46:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:46:31] 
[2025-06-04 21:46:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:46:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:46:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:46:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:46:31] 
[2025-06-04 21:46:31] 2025-06-05 01:46:13,945 | INFO     | **************************************
[2025-06-04 21:46:31] 2025-06-05 01:46:14,449 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 21:46:31] 2025-06-05 01:46:14,469 | INFO     | sufficient remaining disk space (18609078272 B)
[2025-06-04 21:46:31] 2025-06-05 01:46:14,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:46:31] 2025-06-05 01:46:14,470 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:46:31] 2025-06-05 01:46:14,470 | INFO     | update_server=False
[2025-06-04 21:46:31] 2025-06-05 01:46:14,470 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:46:31] 2025-06-05 01:46:14,471 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:46:31] 2025-06-05 01:46:14,471 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:46:31] 2025-06-05 01:46:14,471 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:46:31] 2025-06-05 01:46:14,472 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:46:31] 2025-06-05 01:46:14,473 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:46:31] 2025-06-05 01:46:14,473 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:46:31] 2025-06-05 01:46:14,846 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 21:46:31] 2025-06-05 01:46:14,846 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 21:46:31] 2025-06-05 01:46:14,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:46:31] 2025-06-05 01:46:14,849 | INFO     | will abort loop
[2025-06-04 21:46:31] 2025-06-05 01:46:14,903 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:46:31] 2025-06-05 01:46:15,259 | INFO     | all data control threads have been joined
[2025-06-04 21:46:31] 2025-06-05 01:46:15,260 | INFO     | all job control threads have been joined
[2025-06-04 21:46:31] 2025-06-05 01:46:15,377 | INFO     | all payload control threads have been joined
[2025-06-04 21:46:31] 2025-06-05 01:46:15,476 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:15,478 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:15,721 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:15,854 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:16,163 | INFO     | [job] validate thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:16,194 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:16,264 | INFO     | [data] control thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:16,265 | INFO     | [job] control thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:16,315 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:16,383 | INFO     | [payload] control thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:16,479 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:16,480 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:16,703 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:16,720 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:18,909 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:24,783 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:46:31] 2025-06-05 01:46:25,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:46:31] 2025-06-05 01:46:26,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140284006025024)>', '<ExcThread(monitor, started 140283404601088)>']
[2025-06-04 21:46:31] 2025-06-05 01:46:26,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:46:31] 2025-06-05 01:46:26,536 | INFO     | [monitor] control thread has ended
[2025-06-04 21:46:31] 2025-06-05 01:46:31,293 | INFO     | all workflow threads have been joined
[2025-06-04 21:46:31] 2025-06-05 01:46:31,293 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:46:31] 2025-06-05 01:46:31,294 | INFO     | traces error code: 0
[2025-06-04 21:46:31] 2025-06-05 01:46:31,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:46:31] 2025-06-05 01:46:31,420 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:46:31] 2025-06-05 01:46:31,425 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:46:31] 2025-06-05 01:46:31,429 [wrapper] pilotpid: 3281
[2025-06-04 21:46:31] 2025-06-05 01:46:31,434 [wrapper] Pilot exit status: 0
[2025-06-04 21:46:31] 2025-06-05 01:46:31,453 [wrapper] pandaids: 6668440314
[2025-06-04 21:46:31] 2025-06-05 01:46:31,500 [wrapper] cleanup supervisor_pilot  9612 3282
[2025-06-04 21:46:31] 2025-06-05 01:46:31,505 [wrapper] Test setup, not cleaning
[2025-06-04 21:46:31] 2025-06-05 01:46:31,510 [wrapper] apfmon messages muted
[2025-06-04 21:46:31] 2025-06-05 01:46:31,514 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:46:31] 2025-06-05 01:46:31,518 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:46:31]  *** Error codes and diagnostics ***
[2025-06-04 21:46:31]     "exeErrorCode": 0,
[2025-06-04 21:46:31]     "exeErrorDiag": "",
[2025-06-04 21:46:31]     "pilotErrorCode": 0,
[2025-06-04 21:46:31]     "pilotErrorDiag": "",
[2025-06-04 21:46:31]  *** Listing of results directory ***
[2025-06-04 21:46:31] total 416304
[2025-06-04 21:46:31] -rw-r--r-- 1 boincer umatlas    495897 May 28 07:45 pilot3.tar.gz
[2025-06-04 21:46:31] -rwx------ 1 boincer umatlas     37140 May 28 07:47 runpilot2-wrapper.sh
[2025-06-04 21:46:31] -rw-r--r-- 1 boincer umatlas      5111 May 28 07:47 queuedata.json
[2025-06-04 21:46:31] -rw-r--r-- 1 boincer umatlas       100 Jun  4 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:46:31] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 19:01 run_atlas
[2025-06-04 21:46:31] -rw-r--r-- 1 boincer umatlas       105 Jun  4 19:01 job.xml
[2025-06-04 21:46:31] -rw-r--r-- 2 boincer umatlas 223016703 Jun  4 19:01 EVNT.44871834._003274.pool.root.1
[2025-06-04 21:46:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:01 start_atlas.sh
[2025-06-04 21:46:31] drwxrwx--x 2 boincer umatlas      4096 Jun  4 19:01 shared
[2025-06-04 21:46:31] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 19:01 input.tar.gz
[2025-06-04 21:46:31] -rw-r--r-- 1 boincer umatlas         0 Jun  4 19:01 boinc_lockfile
[2025-06-04 21:46:31] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 19:01 pandaJob.out
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas    987032 Jun  4 19:02 agis_schedconf.cvmfs.json
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas   1598969 Jun  4 19:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:46:31] drwx------ 4 boincer umatlas      4096 Jun  4 19:02 pilot3
[2025-06-04 21:46:31] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 21:45 init_data.xml
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas 196953051 Jun  4 21:45 HITS.44871837._083924.pool.root.1
[2025-06-04 21:46:31] -rw-r--r-- 1 boincer umatlas       529 Jun  4 21:45 boinc_task_state.xml
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas      1046 Jun  4 21:45 memory_monitor_summary.json
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas    351177 Jun  4 21:46 log.44871837._083924.job.log.tgz.1
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas        95 Jun  4 21:46 pilot_heartbeat.json
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas      7749 Jun  4 21:46 heartbeat.json
[2025-06-04 21:46:31] -rw-r--r-- 1 boincer umatlas        27 Jun  4 21:46 wrapper_checkpoint.txt
[2025-06-04 21:46:31] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 21:46 boinc_mmap_file
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas      4734 Jun  4 21:46 pilotlog.txt
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas    895322 Jun  4 21:46 log.44871837._083924.job.log.1
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas       357 Jun  4 21:46 output.list
[2025-06-04 21:46:31] -rw-r--r-- 1 boincer umatlas       620 Jun  4 21:46 runtime_log
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas   1269760 Jun  4 21:46 result.tar.gz
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas       659 Jun  4 21:46 JEWLDmIRUe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmN4bKDm8ArpHm.diag
[2025-06-04 21:46:31] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 21:46 runtime_log.err
[2025-06-04 21:46:31] -rw-r--r-- 1 boincer umatlas     21102 Jun  4 21:46 stderr.txt
[2025-06-04 21:46:31] HITS file was successfully produced:
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas 196953051 Jun  4 21:45 shared/HITS.pool.root.1
[2025-06-04 21:46:31]  *** Contents of shared directory: ***
[2025-06-04 21:46:31] total 411892
[2025-06-04 21:46:31] -rw-r--r-- 2 boincer umatlas 223016703 Jun  4 19:01 ATLAS.root_0
[2025-06-04 21:46:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:01 start_atlas.sh
[2025-06-04 21:46:31] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 19:01 input.tar.gz
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas 196953051 Jun  4 21:45 HITS.pool.root.1
[2025-06-04 21:46:31] -rw------- 1 boincer umatlas   1269760 Jun  4 21:46 result.tar.gz
21:46:32 (31452): run_atlas exited; CPU time 71142.083672
21:46:32 (31452): called boinc_finish(0)

</stderr_txt>
]]>

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