Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:01:42 (9311): wrapper (7.7.26015): starting
19:01:42 (9311): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 19:01:42] Arguments: --nthreads 10
[2025-06-04 19:01:42] Threads: 10
[2025-06-04 19:01:42] Checking for CVMFS
[2025-06-04 19:01:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:01:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:01:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:01:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:01:44] 2.11.2.0 30725 104321 288288 146797 0 590 10371709 18432000 19336 130560 0 461071059 99.146 879408926 36515 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 19:01:44] CVMFS is ok
[2025-06-04 19:01:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:01:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:01:44] Further information can be found at the LHC@home message board.
[2025-06-04 19:01:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:01:44] Checking for apptainer binary...
[2025-06-04 19:01:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:01:44] Running /usr/bin/apptainer --version
[2025-06-04 19:01:45] apptainer version 1.3.2-1.el7
[2025-06-04 19:01:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:02:03] c-210-28.aglt2.org
[2025-06-04 19:02:03] apptainer works
[2025-06-04 19:02:03] Set ATHENA_PROC_NUMBER=10
[2025-06-04 19:02:03] Set ATHENA_CORE_NUMBER=10
[2025-06-04 19:02:04] Starting ATLAS job with PandaID=6667923371
[2025-06-04 19:02:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:04:09]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:04:09] 2025-06-05 05:03:49,504 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:04:09] 2025-06-05 05:03:49,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:04:09] 2025-06-05 05:03:49,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:04:09] 2025-06-05 05:03:49,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:04:09] 2025-06-05 05:03:49,520 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:04:09] 2025-06-05 05:03:49,525 | INFO     | sum of square deviations: 13068113624.517252
[2025-06-05 01:04:09] 2025-06-05 05:03:49,528 | INFO     | sum of deviations: 148388949511.03455
[2025-06-05 01:04:09] 2025-06-05 05:03:49,533 | INFO     | mean x: 1749089156.775862
[2025-06-05 01:04:09] 2025-06-05 05:03:49,533 | INFO     | mean y: 2526929.385057471
[2025-06-05 01:04:09] 2025-06-05 05:03:49,533 | INFO     | -- intersect: -19858449951.63737
[2025-06-05 01:04:09] 2025-06-05 05:03:49,533 | INFO     | intersect: -19858449951.63737
[2025-06-05 01:04:09] 2025-06-05 05:03:49,534 | INFO     | chi2: 8.581480366135182
[2025-06-05 01:04:09] 2025-06-05 05:03:49,534 | INFO     | sum of square deviations: 12512808594.857203
[2025-06-05 01:04:09] 2025-06-05 05:03:49,541 | INFO     | sum of deviations: 194494339765.71448
[2025-06-05 01:04:09] 2025-06-05 05:03:49,542 | INFO     | mean x: 1749089004.2653062
[2025-06-05 01:04:09] 2025-06-05 05:03:49,542 | INFO     | mean y: 2539477.2448979593
[2025-06-05 01:04:09] 2025-06-05 05:03:49,542 | INFO     | -- intersect: -27184635048.534214
[2025-06-05 01:04:09] 2025-06-05 05:03:49,542 | INFO     | intersect: -27184635048.534214
[2025-06-05 01:04:09] 2025-06-05 05:03:49,543 | INFO     | chi2: 7.056523310696166
[2025-06-05 01:04:09] 2025-06-05 05:03:49,543 | INFO     | current chi2=7.056523310696166 (change=17.770326218503097 %)
[2025-06-05 01:04:09] 2025-06-05 05:03:49,543 | INFO     | right removable region: 342
[2025-06-05 01:04:09] 2025-06-05 05:03:49,543 | INFO     | sum of square deviations: 12512855329.131227
[2025-06-05 01:04:09] 2025-06-05 05:03:49,550 | INFO     | sum of deviations: 24986009165.848373
[2025-06-05 01:04:09] 2025-06-05 05:03:49,550 | INFO     | mean x: 1749089309.2798834
[2025-06-05 01:04:09] 2025-06-05 05:03:49,550 | INFO     | mean y: 2560802.2099125367
[2025-06-05 01:04:09] 2025-06-05 05:03:49,550 | INFO     | -- intersect: -3490068207.2384744
[2025-06-05 01:04:09] 2025-06-05 05:03:49,550 | INFO     | intersect: -3490068207.2384744
[2025-06-05 01:04:09] 2025-06-05 05:03:49,551 | INFO     | chi2: 3.9702163598296907
[2025-06-05 01:04:09] 2025-06-05 05:03:49,551 | INFO     | current chi2=3.9702163598296907 (change=53.735064459306734 %)
[2025-06-05 01:04:09] 2025-06-05 05:03:49,556 | INFO     | sum of square deviations: 11973550821.233807
[2025-06-05 01:04:09] 2025-06-05 05:03:49,559 | INFO     | sum of deviations: -52929143318.49997
[2025-06-05 01:04:09] 2025-06-05 05:03:49,559 | INFO     | mean x: 1749089461.7840238
[2025-06-05 01:04:09] 2025-06-05 05:03:49,559 | INFO     | mean y: 2582779.5
[2025-06-05 01:04:09] 2025-06-05 05:03:49,559 | INFO     | -- intersect: 7734441789.566402
[2025-06-05 01:04:09] 2025-06-05 05:03:49,563 | INFO     | intersect: 7734441789.566402
[2025-06-05 01:04:09] 2025-06-05 05:03:49,564 | INFO     | chi2: 2.057726014589953
[2025-06-05 01:04:09] 2025-06-05 05:03:49,564 | INFO     | current chi2=2.057726014589953 (change=48.17093508026795 %)
[2025-06-05 01:04:09] 2025-06-05 05:03:49,565 | INFO     | sum of square deviations: 11449967538.324308
[2025-06-05 01:04:09] 2025-06-05 05:03:49,572 | INFO     | sum of deviations: -77848294481.82881
[2025-06-05 01:04:09] 2025-06-05 05:03:49,572 | INFO     | mean x: 1749089614.2882884
[2025-06-05 01:04:09] 2025-06-05 05:03:49,572 | INFO     | mean y: 2590019.6336336336
[2025-06-05 01:04:09] 2025-06-05 05:03:49,572 | INFO     | -- intersect: 11894644989.437546
[2025-06-05 01:04:09] 2025-06-05 05:03:49,572 | INFO     | intersect: 11894644989.437546
[2025-06-05 01:04:09] 2025-06-05 05:03:49,573 | INFO     | chi2: 1.8435121287613265
[2025-06-05 01:04:09] 2025-06-05 05:03:49,573 | INFO     | current chi2=1.8435121287613265 (change=10.410223922416282 %)
[2025-06-05 01:04:09] 2025-06-05 05:03:49,573 | INFO     | left removable region: 30
[2025-06-05 01:04:09] 2025-06-05 05:03:49,574 | INFO     | sum of square deviations: 9417376399.17952
[2025-06-05 01:04:09] 2025-06-05 05:03:49,580 | INFO     | sum of deviations: -44196089330.92306
[2025-06-05 01:04:09] 2025-06-05 05:03:49,581 | INFO     | mean x: 1749089888.7820513
[2025-06-05 01:04:09] 2025-06-05 05:03:49,581 | INFO     | mean y: 2608321.4423076925
[2025-06-05 01:04:09] 2025-06-05 05:03:49,581 | INFO     | -- intersect: 8211150668.667674
[2025-06-05 01:04:09] 2025-06-05 05:03:49,581 | INFO     | intersect: 8211150668.667674
[2025-06-05 01:04:09] 2025-06-05 05:03:49,582 | INFO     | chi2: 0.09621291799337581
[2025-06-05 01:04:09] 2025-06-05 05:03:49,582 | INFO     | -- intersect: 8211150668.667674
[2025-06-05 01:04:09] 2025-06-05 05:03:49,582 | INFO     | current memory leak: -4.69 B/s (using 312 data points, chi2=0.10)
[2025-06-05 01:04:09] 2025-06-05 05:03:49,583 | INFO     | ..............................
[2025-06-05 01:04:09] 2025-06-05 05:03:49,583 | INFO     | . Timing measurements:
[2025-06-05 01:04:09] 2025-06-05 05:03:49,583 | INFO     | . get job = 0 s
[2025-06-05 01:04:09] 2025-06-05 05:03:49,583 | INFO     | . initial setup = 8 s
[2025-06-05 01:04:09] 2025-06-05 05:03:49,583 | INFO     | . payload setup = 123 s
[2025-06-05 01:04:09] 2025-06-05 05:03:49,583 | INFO     | . stage-in = 0 s
[2025-06-05 01:04:09] 2025-06-05 05:03:49,588 | INFO     | . payload execution = 21273 s
[2025-06-05 01:04:09] 2025-06-05 05:03:49,588 | INFO     | . stage-out = 6 s
[2025-06-05 01:04:09] 2025-06-05 05:03:49,588 | INFO     | . log creation = 0 s
[2025-06-05 01:04:09] 2025-06-05 05:03:49,588 | INFO     | ..............................
[2025-06-05 01:04:09] 2025-06-05 05:03:49,883 | INFO     | PID=16568 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 01:04:09] 2025-06-05 05:03:49,887 | INFO     | .. there are 35 such processes running
[2025-06-05 01:04:09] 2025-06-05 05:03:50,116 | INFO     | 
[2025-06-05 01:04:09] 2025-06-05 05:03:50,117 | INFO     | job summary report
[2025-06-05 01:04:09] 2025-06-05 05:03:50,117 | INFO     | --------------------------------------------------
[2025-06-05 01:04:09] 2025-06-05 05:03:50,117 | INFO     | PanDA job id: 6667923371
[2025-06-05 01:04:09] 2025-06-05 05:03:50,117 | INFO     | task id: 44871837
[2025-06-05 01:04:09] 2025-06-05 05:03:50,117 | INFO     | errors: (none)
[2025-06-05 01:04:09] 2025-06-05 05:03:50,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:04:09] 2025-06-05 05:03:50,117 | INFO     | pilot state: finished 
[2025-06-05 01:04:09] 2025-06-05 05:03:50,117 | INFO     | transexitcode: 0
[2025-06-05 01:04:09] 2025-06-05 05:03:50,118 | INFO     | exeerrorcode: 0
[2025-06-05 01:04:09] 2025-06-05 05:03:50,118 | INFO     | exeerrordiag: 
[2025-06-05 01:04:09] 2025-06-05 05:03:50,118 | INFO     | exitcode: 0
[2025-06-05 01:04:09] 2025-06-05 05:03:50,118 | INFO     | exitmsg: OK
[2025-06-05 01:04:09] 2025-06-05 05:03:50,118 | INFO     | cpuconsumptiontime: 68742 s
[2025-06-05 01:04:09] 2025-06-05 05:03:50,118 | INFO     | nevents: 400
[2025-06-05 01:04:09] 2025-06-05 05:03:50,118 | INFO     | neventsw: 0
[2025-06-05 01:04:09] 2025-06-05 05:03:50,118 | INFO     | pid: 36873
[2025-06-05 01:04:09] 2025-06-05 05:03:50,118 | INFO     | pgrp: 36873
[2025-06-05 01:04:09] 2025-06-05 05:03:50,118 | INFO     | corecount: 10
[2025-06-05 01:04:09] 2025-06-05 05:03:50,118 | INFO     | event service: False
[2025-06-05 01:04:09] 2025-06-05 05:03:50,119 | INFO     | sizes: {0: 2396564, 1: 2397420, 2: 2397420, 12: 2397448, 23: 2397476, 34: 2397504, 45: 2397660, 56: 2397688, 57: 2397922, 67: 2397950, 21401: 2431446, 21402: 24317
[2025-06-05 01:04:09] 2025-06-05 05:03:50,119 | INFO     | --------------------------------------------------
[2025-06-05 01:04:09] 2025-06-05 05:03:50,119 | INFO     | 
[2025-06-05 01:04:09] 2025-06-05 05:03:50,119 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 01:04:09] 2025-06-05 05:03:50,336 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,337 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,337 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,337 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,338 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,338 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,338 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,338 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:04:09] 2025-06-05 05:03:50,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,339 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:04:09] 2025-06-05 05:03:50,339 | INFO     | job 6667923371 has completed (purged errors)
[2025-06-05 01:04:09] 2025-06-05 05:03:50,339 | INFO     | overall cleanup function is called
[2025-06-05 01:04:09] 2025-06-05 05:03:51,351 | INFO     | --- collectZombieJob: --- 10, [36873]
[2025-06-05 01:04:09] 2025-06-05 05:03:51,352 | INFO     | zombie collector waiting for pid 36873
[2025-06-05 01:04:09] 2025-06-05 05:03:51,352 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:04:09] 2025-06-05 05:03:51,352 | INFO     | collected zombie processes
[2025-06-05 01:04:09] 2025-06-05 05:03:51,352 | INFO     | will attempt to kill all subprocesses of pid=36873
[2025-06-05 01:04:09] 2025-06-05 05:03:52,539 | INFO     | process IDs to be killed: [36873] (in reverse order)
[2025-06-05 01:04:09] 2025-06-05 05:03:53,277 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:04:09] 2025-06-05 05:03:53,277 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:04:09] 2025-06-05 05:03:53,290 | INFO     | did not find any defunct processes belonging to 36873
[2025-06-05 01:04:09] 2025-06-05 05:03:53,302 | INFO     | did not find any defunct processes belonging to 36873
[2025-06-05 01:04:09] 2025-06-05 05:03:53,302 | INFO     | ready for new job
[2025-06-05 01:04:09] 2025-06-05 05:03:53,302 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:04:09] 2025-06-05 05:03:53,305 | INFO     | **************************************
[2025-06-05 01:04:09] 2025-06-05 05:03:53,305 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:04:09] 2025-06-05 05:03:53,305 | INFO     | **************************************
[2025-06-05 01:04:09] 2025-06-05 05:03:53,305 | INFO     | 
[2025-06-05 01:04:09] 2025-06-05 05:03:53,308 | INFO     | architecture information:
[2025-06-05 01:04:09] 2025-06-05 05:03:53,308 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:04:09] 2025-06-05 05:03:53,452 | INFO     | cat /etc/os-release:
[2025-06-05 01:04:09] NAME="CentOS Linux"
[2025-06-05 01:04:09] VERSION="7 (Core)"
[2025-06-05 01:04:09] ID="centos"
[2025-06-05 01:04:09] ID_LIKE="rhel fedora"
[2025-06-05 01:04:09] VERSION_ID="7"
[2025-06-05 01:04:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:04:09] ANSI_COLOR="0;31"
[2025-06-05 01:04:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:04:09] HOME_URL="https://www.centos.org/"
[2025-06-05 01:04:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:04:09] 
[2025-06-05 01:04:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:04:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:04:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:04:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:04:09] 
[2025-06-05 01:04:09] 2025-06-05 05:03:53,453 | INFO     | **************************************
[2025-06-05 01:04:09] 2025-06-05 05:03:53,957 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 01:04:09] 2025-06-05 05:03:54,069 | INFO     | sufficient remaining disk space (57099157504 B)
[2025-06-05 01:04:09] 2025-06-05 05:03:54,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:04:09] 2025-06-05 05:03:54,070 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:04:09] 2025-06-05 05:03:54,070 | INFO     | update_server=False
[2025-06-05 01:04:09] 2025-06-05 05:03:54,070 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:04:09] 2025-06-05 05:03:54,071 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:04:09] 2025-06-05 05:03:54,071 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:04:09] 2025-06-05 05:03:54,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:04:09] 2025-06-05 05:03:54,071 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:04:09] 2025-06-05 05:03:54,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:04:09] 2025-06-05 05:03:54,132 | INFO     | aborting loop
[2025-06-05 01:04:09] 2025-06-05 05:03:54,156 | INFO     | all data control threads have been joined
[2025-06-05 01:04:09] 2025-06-05 05:03:54,233 | INFO     | all job control threads have been joined
[2025-06-05 01:04:09] 2025-06-05 05:03:54,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:04:09] 2025-06-05 05:03:54,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:04:09] 2025-06-05 05:03:55,077 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:55,138 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:55,162 | INFO     | [data] control thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:55,173 | INFO     | [job] validate thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:55,173 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:55,173 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:55,237 | INFO     | all payload control threads have been joined
[2025-06-05 01:04:09] 2025-06-05 05:03:55,243 | INFO     | [job] control thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:55,319 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:55,340 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:55,966 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:56,157 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:56,207 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:56,243 | INFO     | [payload] control thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:56,563 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:56,650 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:03:56,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:04:09] 2025-06-05 05:04:00,760 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:04:09] 2025-06-05 05:04:01,577 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140056343369536)>', '<ExcThread(monitor, started 140055897159424)>']
[2025-06-05 01:04:09] 2025-06-05 05:04:02,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:04:09] 2025-06-05 05:04:02,127 | INFO     | [monitor] control thread has ended
[2025-06-05 01:04:09] 2025-06-05 05:04:06,603 | INFO     | all workflow threads have been joined
[2025-06-05 01:04:09] 2025-06-05 05:04:06,607 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:04:09] 2025-06-05 05:04:06,608 | INFO     | traces error code: 0
[2025-06-05 01:04:09] 2025-06-05 05:04:06,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:04:09] 2025-06-05 05:04:07,633 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:04:09] 2025-06-05 05:04:07,676 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:04:09] 2025-06-05 05:04:07,724 [wrapper] pilotpid: 16568
[2025-06-05 01:04:09] 2025-06-05 05:04:07,769 [wrapper] Pilot exit status: 0
[2025-06-05 01:04:09] 2025-06-05 05:04:08,002 [wrapper] pandaids: 6667923371
[2025-06-05 01:04:09] 2025-06-05 05:04:08,286 [wrapper] cleanup supervisor_pilot 38454 16569
[2025-06-05 01:04:09] 2025-06-05 05:04:08,316 [wrapper] Test setup, not cleaning
[2025-06-05 01:04:09] 2025-06-05 05:04:08,351 [wrapper] apfmon messages muted
[2025-06-05 01:04:09] 2025-06-05 05:04:08,374 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:04:09] 2025-06-05 05:04:08,414 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:04:09]  *** Error codes and diagnostics ***
[2025-06-05 01:04:09]     "exeErrorCode": 0,
[2025-06-05 01:04:09]     "exeErrorDiag": "",
[2025-06-05 01:04:09]     "pilotErrorCode": 0,
[2025-06-05 01:04:09]     "pilotErrorDiag": "",
[2025-06-05 01:04:09]  *** Listing of results directory ***
[2025-06-05 01:04:09] total 422304
[2025-06-05 01:04:09] -rw-r--r-- 1 boincer umatlas    495897 May 27 22:39 pilot3.tar.gz
[2025-06-05 01:04:09] -rwx------ 1 boincer umatlas     37140 May 27 23:05 runpilot2-wrapper.sh
[2025-06-05 01:04:09] -rw-r--r-- 1 boincer umatlas      5111 May 27 23:05 queuedata.json
[2025-06-05 01:04:09] -rw-r--r-- 1 boincer umatlas       100 Jun  4 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:04:09] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 19:01 run_atlas
[2025-06-05 01:04:09] -rw-r--r-- 1 boincer umatlas       105 Jun  4 19:01 job.xml
[2025-06-05 01:04:09] -rw-r--r-- 2 boincer umatlas 224668063 Jun  4 19:01 EVNT.44871834._003046.pool.root.1
[2025-06-05 01:04:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:01 start_atlas.sh
[2025-06-05 01:04:09] drwxrwx--x 2 boincer umatlas      4096 Jun  4 19:01 shared
[2025-06-05 01:04:09] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 19:01 input.tar.gz
[2025-06-05 01:04:09] -rw-r--r-- 1 boincer umatlas         0 Jun  4 19:01 boinc_lockfile
[2025-06-05 01:04:09] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 19:02 pandaJob.out
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas    987032 Jun  4 19:03 agis_schedconf.cvmfs.json
[2025-06-05 01:04:09] drwx------ 4 boincer umatlas      4096 Jun  4 19:03 pilot3
[2025-06-05 01:04:09] -rw-r--r-- 1 boincer umatlas      6229 Jun  5 01:00 init_data.xml
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas 199391716 Jun  5 01:00 HITS.44871837._077923.pool.root.1
[2025-06-05 01:04:09] -rw-r--r-- 1 boincer umatlas       531 Jun  5 01:00 boinc_task_state.xml
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas      1075 Jun  5 01:02 memory_monitor_summary.json
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas   1598969 Jun  5 01:02 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas    485083 Jun  5 01:02 log.44871837._077923.job.log.tgz.1
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas        95 Jun  5 01:03 pilot_heartbeat.json
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas      7759 Jun  5 01:03 heartbeat.json
[2025-06-05 01:04:09] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 01:03 boinc_mmap_file
[2025-06-05 01:04:09] -rw-r--r-- 1 boincer umatlas        28 Jun  5 01:03 wrapper_checkpoint.txt
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas      4476 Jun  5 01:04 pilotlog.txt
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas   1789862 Jun  5 01:04 log.44871837._077923.job.log.1
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas       357 Jun  5 01:04 output.list
[2025-06-05 01:04:09] -rw-r--r-- 1 boincer umatlas       620 Jun  5 01:04 runtime_log
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas   2293760 Jun  5 01:04 result.tar.gz
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas       663 Jun  5 01:04 YmzKDmeHMe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSqSKDmuWKjom.diag
[2025-06-05 01:04:09] -rw-r--r-- 1 boincer umatlas      8662 Jun  5 01:04 runtime_log.err
[2025-06-05 01:04:09] -rw-r--r-- 1 boincer umatlas     21028 Jun  5 01:04 stderr.txt
[2025-06-05 01:04:09] HITS file was successfully produced:
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas 199391716 Jun  5 01:00 shared/HITS.pool.root.1
[2025-06-05 01:04:09]  *** Contents of shared directory: ***
[2025-06-05 01:04:09] total 416888
[2025-06-05 01:04:09] -rw-r--r-- 2 boincer umatlas 224668063 Jun  4 19:01 ATLAS.root_0
[2025-06-05 01:04:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 19:01 start_atlas.sh
[2025-06-05 01:04:09] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 19:01 input.tar.gz
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas 199391716 Jun  5 01:00 HITS.pool.root.1
[2025-06-05 01:04:09] -rw------- 1 boincer umatlas   2293760 Jun  5 01:04 result.tar.gz
01:04:10 (9311): run_atlas exited; CPU time 69430.145183
01:04:10 (9311): called boinc_finish(0)

</stderr_txt>
]]>

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