Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:55:41 (22341): wrapper (7.7.26015): starting
18:55:41 (22341): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 18:55:41] Arguments: --nthreads 9
[2025-06-04 18:55:41] Threads: 9
[2025-06-04 18:55:41] Checking for CVMFS
[2025-06-04 18:55:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:55:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:55:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:55:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:55:42] 2.11.2.0 5563 29410 283448 146797 2 735 15276266 18432000 9810 130560 0 70877354 99.457 73285814 29361 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 18:55:42] CVMFS is ok
[2025-06-04 18:55:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:55:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:55:42] Further information can be found at the LHC@home message board.
[2025-06-04 18:55:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:55:42] Checking for apptainer binary...
[2025-06-04 18:55:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:55:42] Running /usr/bin/apptainer --version
[2025-06-04 18:55:42] apptainer version 1.3.2-1.el7
[2025-06-04 18:55:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:55:44] c-210-35-2.aglt2.org
[2025-06-04 18:55:44] apptainer works
[2025-06-04 18:55:44] Set ATHENA_PROC_NUMBER=9
[2025-06-04 18:55:44] Set ATHENA_CORE_NUMBER=9
[2025-06-04 18:55:44] Starting ATLAS job with PandaID=6677419665
[2025-06-04 18:55:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:57:51]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:57:51] 2025-06-05 01:57:36,400 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677419665/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:57:51] 2025-06-05 01:57:36,401 | INFO     | extracted standard info from prmon json
[2025-06-04 21:57:51] 2025-06-05 01:57:36,401 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:57:51] 2025-06-05 01:57:36,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:57:51] 2025-06-05 01:57:36,401 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:57:51] 2025-06-05 01:57:36,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:57:51] 2025-06-05 01:57:36,405 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:57:51] 2025-06-05 01:57:36,405 | INFO     | sum of square deviations: 1748834097.5561793
[2025-06-04 21:57:51] 2025-06-05 01:57:36,406 | INFO     | sum of deviations: 2077479992.865162
[2025-06-04 21:57:51] 2025-06-05 01:57:36,407 | INFO     | mean x: 1749083193.7696629
[2025-06-04 21:57:51] 2025-06-05 01:57:36,407 | INFO     | mean y: 2512448.7528089886
[2025-06-04 21:57:51] 2025-06-05 01:57:36,407 | INFO     | -- intersect: -2075263451.1972694
[2025-06-04 21:57:51] 2025-06-05 01:57:36,407 | INFO     | intersect: -2075263451.1972694
[2025-06-04 21:57:51] 2025-06-05 01:57:36,407 | INFO     | chi2: 2.3014652037841574
[2025-06-04 21:57:51] 2025-06-05 01:57:36,408 | INFO     | sum of square deviations: 1605580934.6820817
[2025-06-04 21:57:51] 2025-06-05 01:57:36,409 | INFO     | sum of deviations: 13751959064.87283
[2025-06-04 21:57:51] 2025-06-05 01:57:36,409 | INFO     | mean x: 1749083041.2774568
[2025-06-04 21:57:51] 2025-06-05 01:57:36,409 | INFO     | mean y: 2524586.710982659
[2025-06-04 21:57:51] 2025-06-05 01:57:36,409 | INFO     | -- intersect: -14978544174.84205
[2025-06-04 21:57:51] 2025-06-05 01:57:36,409 | INFO     | intersect: -14978544174.84205
[2025-06-04 21:57:51] 2025-06-05 01:57:36,409 | INFO     | chi2: 1.5309774536100844
[2025-06-04 21:57:51] 2025-06-05 01:57:36,409 | INFO     | current chi2=1.5309774536100844 (change=33.478140312841035 %)
[2025-06-04 21:57:51] 2025-06-05 01:57:36,410 | INFO     | sum of square deviations: 1470374434.2857153
[2025-06-04 21:57:51] 2025-06-05 01:57:36,410 | INFO     | sum of deviations: 13263468176.285715
[2025-06-04 21:57:51] 2025-06-05 01:57:36,411 | INFO     | mean x: 1749082888.7857144
[2025-06-04 21:57:51] 2025-06-05 01:57:36,411 | INFO     | mean y: 2524035.619047619
[2025-06-04 21:57:51] 2025-06-05 01:57:36,411 | INFO     | -- intersect: -15775025336.942556
[2025-06-04 21:57:51] 2025-06-05 01:57:36,411 | INFO     | intersect: -15775025336.942556
[2025-06-04 21:57:51] 2025-06-05 01:57:36,411 | INFO     | chi2: 1.5322465662760965
[2025-06-04 21:57:51] 2025-06-05 01:57:36,411 | INFO     | current chi2=1.5322465662760965 (change=-0.08289558170954377 %)
[2025-06-04 21:57:51] 2025-06-05 01:57:36,411 | INFO     | right removable region: 167
[2025-06-04 21:57:51] 2025-06-05 01:57:36,412 | INFO     | sum of square deviations: 1605551654.6820817
[2025-06-04 21:57:51] 2025-06-05 01:57:36,412 | INFO     | sum of deviations: -24313951157.751427
[2025-06-04 21:57:51] 2025-06-05 01:57:36,413 | INFO     | mean x: 1749083346.2774568
[2025-06-04 21:57:51] 2025-06-05 01:57:36,413 | INFO     | mean y: 2540163.4739884394
[2025-06-04 21:57:51] 2025-06-05 01:57:36,413 | INFO     | -- intersect: 26490088495.04566
[2025-06-04 21:57:51] 2025-06-05 01:57:36,413 | INFO     | intersect: 26490088495.04566
[2025-06-04 21:57:51] 2025-06-05 01:57:36,413 | INFO     | chi2: 0.8924764562677439
[2025-06-04 21:57:51] 2025-06-05 01:57:36,413 | INFO     | current chi2=0.8924764562677439 (change=61.22137954550433 %)
[2025-06-04 21:57:51] 2025-06-05 01:57:36,413 | INFO     | sum of square deviations: 1470315874.2857153
[2025-06-04 21:57:51] 2025-06-05 01:57:36,414 | INFO     | sum of deviations: -18398834895.285713
[2025-06-04 21:57:51] 2025-06-05 01:57:36,414 | INFO     | mean x: 1749083498.7857144
[2025-06-04 21:57:51] 2025-06-05 01:57:36,415 | INFO     | mean y: 2533477.5476190476
[2025-06-04 21:57:51] 2025-06-05 01:57:36,415 | INFO     | -- intersect: 21889734095.483353
[2025-06-04 21:57:51] 2025-06-05 01:57:36,415 | INFO     | intersect: 21889734095.483353
[2025-06-04 21:57:51] 2025-06-05 01:57:36,415 | INFO     | chi2: 0.8690904625851124
[2025-06-04 21:57:51] 2025-06-05 01:57:36,415 | INFO     | current chi2=0.8690904625851124 (change=2.6203485277840963 %)
[2025-06-04 21:57:51] 2025-06-05 01:57:36,415 | INFO     | left removable region: 20
[2025-06-04 21:57:51] 2025-06-05 01:57:36,415 | INFO     | sum of square deviations: 985011096.326531
[2025-06-04 21:57:51] 2025-06-05 01:57:36,416 | INFO     | sum of deviations: 1675156146.8163261
[2025-06-04 21:57:51] 2025-06-05 01:57:36,416 | INFO     | mean x: 1749083468.3265307
[2025-06-04 21:57:51] 2025-06-05 01:57:36,416 | INFO     | mean y: 2535509.149659864
[2025-06-04 21:57:51] 2025-06-05 01:57:36,416 | INFO     | -- intersect: -2972038010.061454
[2025-06-04 21:57:51] 2025-06-05 01:57:36,416 | INFO     | intersect: -2972038010.061454
[2025-06-04 21:57:51] 2025-06-05 01:57:36,417 | INFO     | chi2: 0.000770371743418228
[2025-06-04 21:57:51] 2025-06-05 01:57:36,417 | INFO     | -- intersect: -2972038010.061454
[2025-06-04 21:57:51] 2025-06-05 01:57:36,417 | INFO     | current memory leak: 1.70 B/s (using 147 data points, chi2=0.00)
[2025-06-04 21:57:51] 2025-06-05 01:57:36,418 | INFO     | ..............................
[2025-06-04 21:57:51] 2025-06-05 01:57:36,418 | INFO     | . Timing measurements:
[2025-06-04 21:57:51] 2025-06-05 01:57:36,418 | INFO     | . get job = 0 s
[2025-06-04 21:57:51] 2025-06-05 01:57:36,418 | INFO     | . initial setup = 3 s
[2025-06-04 21:57:51] 2025-06-05 01:57:36,418 | INFO     | . payload setup = 9 s
[2025-06-04 21:57:51] 2025-06-05 01:57:36,418 | INFO     | . stage-in = 0 s
[2025-06-04 21:57:51] 2025-06-05 01:57:36,418 | INFO     | . payload execution = 10831 s
[2025-06-04 21:57:51] 2025-06-05 01:57:36,418 | INFO     | . stage-out = 3 s
[2025-06-04 21:57:51] 2025-06-05 01:57:36,418 | INFO     | . log creation = 0 s
[2025-06-04 21:57:51] 2025-06-05 01:57:36,418 | INFO     | ..............................
[2025-06-04 21:57:51] 2025-06-05 01:57:36,515 | INFO     | 
[2025-06-04 21:57:51] 2025-06-05 01:57:36,515 | INFO     | job summary report
[2025-06-04 21:57:51] 2025-06-05 01:57:36,515 | INFO     | --------------------------------------------------
[2025-06-04 21:57:51] 2025-06-05 01:57:36,515 | INFO     | PanDA job id: 6677419665
[2025-06-04 21:57:51] 2025-06-05 01:57:36,515 | INFO     | task id: 45006595
[2025-06-04 21:57:51] 2025-06-05 01:57:36,515 | INFO     | errors: (none)
[2025-06-04 21:57:51] 2025-06-05 01:57:36,515 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | pilot state: finished 
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | transexitcode: 0
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | exeerrorcode: 0
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | exeerrordiag: 
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | exitcode: 0
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | exitmsg: OK
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | cpuconsumptiontime: 37108 s
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | nevents: 400
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | neventsw: 0
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | pid: 32481
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | pgrp: 32481
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | corecount: 9
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | event service: False
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | sizes: {0: 2397340, 5: 2397546, 11: 2397602, 10845: 2426650, 10848: 2435591, 10851: 2435647, 10881: 2435945}
[2025-06-04 21:57:51] 2025-06-05 01:57:36,516 | INFO     | --------------------------------------------------
[2025-06-04 21:57:51] 2025-06-05 01:57:36,517 | INFO     | 
[2025-06-04 21:57:51] 2025-06-05 01:57:36,517 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 21:57:51] 2025-06-05 01:57:36,544 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,544 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,544 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,544 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,545 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,545 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,545 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,545 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,545 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,545 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:57:51] 2025-06-05 01:57:36,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,546 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:57:51] 2025-06-05 01:57:36,546 | INFO     | job 6677419665 has completed (purged errors)
[2025-06-04 21:57:51] 2025-06-05 01:57:36,546 | INFO     | overall cleanup function is called
[2025-06-04 21:57:51] 2025-06-05 01:57:37,555 | INFO     | --- collectZombieJob: --- 10, [32481]
[2025-06-04 21:57:51] 2025-06-05 01:57:37,555 | INFO     | zombie collector waiting for pid 32481
[2025-06-04 21:57:51] 2025-06-05 01:57:37,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:57:51] 2025-06-05 01:57:37,555 | INFO     | collected zombie processes
[2025-06-04 21:57:51] 2025-06-05 01:57:37,555 | INFO     | will attempt to kill all subprocesses of pid=32481
[2025-06-04 21:57:51] 2025-06-05 01:57:38,004 | INFO     | process IDs to be killed: [32481] (in reverse order)
[2025-06-04 21:57:51] 2025-06-05 01:57:38,292 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:57:51] 2025-06-05 01:57:38,292 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:57:51] 2025-06-05 01:57:38,298 | INFO     | did not find any defunct processes belonging to 32481
[2025-06-04 21:57:51] 2025-06-05 01:57:38,303 | INFO     | did not find any defunct processes belonging to 32481
[2025-06-04 21:57:51] 2025-06-05 01:57:38,304 | INFO     | ready for new job
[2025-06-04 21:57:51] 2025-06-05 01:57:38,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:57:51] 2025-06-05 01:57:38,305 | INFO     | **************************************
[2025-06-04 21:57:51] 2025-06-05 01:57:38,305 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:57:51] 2025-06-05 01:57:38,306 | INFO     | **************************************
[2025-06-04 21:57:51] 2025-06-05 01:57:38,306 | INFO     | 
[2025-06-04 21:57:51] 2025-06-05 01:57:38,309 | INFO     | architecture information:
[2025-06-04 21:57:51] 2025-06-05 01:57:38,309 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:57:51] 2025-06-05 01:57:38,341 | INFO     | cat /etc/os-release:
[2025-06-04 21:57:51] NAME="CentOS Linux"
[2025-06-04 21:57:51] VERSION="7 (Core)"
[2025-06-04 21:57:51] ID="centos"
[2025-06-04 21:57:51] ID_LIKE="rhel fedora"
[2025-06-04 21:57:51] VERSION_ID="7"
[2025-06-04 21:57:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:57:51] ANSI_COLOR="0;31"
[2025-06-04 21:57:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:57:51] HOME_URL="https://www.centos.org/"
[2025-06-04 21:57:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:57:51] 
[2025-06-04 21:57:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:57:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:57:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:57:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:57:51] 
[2025-06-04 21:57:51] 2025-06-05 01:57:38,341 | INFO     | **************************************
[2025-06-04 21:57:51] 2025-06-05 01:57:38,842 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 21:57:51] 2025-06-05 01:57:38,868 | INFO     | sufficient remaining disk space (56713281536 B)
[2025-06-04 21:57:51] 2025-06-05 01:57:38,868 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:57:51] 2025-06-05 01:57:38,868 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:57:51] 2025-06-05 01:57:38,868 | INFO     | update_server=False
[2025-06-04 21:57:51] 2025-06-05 01:57:38,868 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:57:51] 2025-06-05 01:57:38,869 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:57:51] 2025-06-05 01:57:38,869 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:57:51] 2025-06-05 01:57:38,869 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:57:51] 2025-06-05 01:57:38,869 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:57:51] 2025-06-05 01:57:38,952 | INFO     | all data control threads have been joined
[2025-06-04 21:57:51] 2025-06-05 01:57:39,056 | INFO     | all job control threads have been joined
[2025-06-04 21:57:51] 2025-06-05 01:57:39,374 | INFO     | all payload control threads have been joined
[2025-06-04 21:57:51] 2025-06-05 01:57:39,637 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:57:51] 2025-06-05 01:57:39,637 | INFO     | aborting loop
[2025-06-04 21:57:51] 2025-06-05 01:57:39,874 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:39,958 | INFO     | [data] control thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:39,962 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:39,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:57:51] 2025-06-05 01:57:39,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:57:51] 2025-06-05 01:57:40,060 | INFO     | [job] control thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:40,279 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:40,280 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:40,380 | INFO     | [payload] control thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:40,633 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:40,642 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:40,932 | INFO     | [job] validate thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:41,017 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:41,107 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:41,139 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:41,524 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:57:51] 2025-06-05 01:57:41,977 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:42,530 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:44,004 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:57:51] 2025-06-05 01:57:46,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139979975952192)>', '<ExcThread(monitor, started 139979409839872)>']
[2025-06-04 21:57:51] 2025-06-05 01:57:46,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:57:51] 2025-06-05 01:57:46,908 | INFO     | [monitor] control thread has ended
[2025-06-04 21:57:51] 2025-06-05 01:57:51,082 | INFO     | all workflow threads have been joined
[2025-06-04 21:57:51] 2025-06-05 01:57:51,082 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:57:51] 2025-06-05 01:57:51,082 | INFO     | traces error code: 0
[2025-06-04 21:57:51] 2025-06-05 01:57:51,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:57:51] 2025-06-05 01:57:51,238 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:57:51] 2025-06-05 01:57:51,256 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:57:51] 2025-06-05 01:57:51,298 [wrapper] pilotpid: 25941
[2025-06-04 21:57:51] 2025-06-05 01:57:51,301 [wrapper] Pilot exit status: 0
[2025-06-04 21:57:51] 2025-06-05 01:57:51,318 [wrapper] pandaids: 6677419665
[2025-06-04 21:57:51] 2025-06-05 01:57:51,376 [wrapper] cleanup supervisor_pilot 261837 25942
[2025-06-04 21:57:51] 2025-06-05 01:57:51,378 [wrapper] Test setup, not cleaning
[2025-06-04 21:57:51] 2025-06-05 01:57:51,381 [wrapper] apfmon messages muted
[2025-06-04 21:57:51] 2025-06-05 01:57:51,383 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:57:51] 2025-06-05 01:57:51,385 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:57:51]  *** Error codes and diagnostics ***
[2025-06-04 21:57:51]     "exeErrorCode": 0,
[2025-06-04 21:57:51]     "exeErrorDiag": "",
[2025-06-04 21:57:51]     "pilotErrorCode": 0,
[2025-06-04 21:57:51]     "pilotErrorDiag": "",
[2025-06-04 21:57:51]  *** Listing of results directory ***
[2025-06-04 21:57:51] total 398148
[2025-06-04 21:57:51] -rw-r--r-- 1 boincer umatlas    495897 Jun  2 19:21 pilot3.tar.gz
[2025-06-04 21:57:51] -rw-r--r-- 1 boincer umatlas      5111 Jun  2 19:31 queuedata.json
[2025-06-04 21:57:51] -rwx------ 1 boincer umatlas     37140 Jun  2 19:33 runpilot2-wrapper.sh
[2025-06-04 21:57:51] -rw-r--r-- 1 boincer umatlas       100 Jun  4 18:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:57:51] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 18:55 run_atlas
[2025-06-04 21:57:51] -rw-r--r-- 1 boincer umatlas       105 Jun  4 18:55 job.xml
[2025-06-04 21:57:51] -rw-r--r-- 2 boincer umatlas 219701979 Jun  4 18:55 EVNT.45006593._000574.pool.root.1
[2025-06-04 21:57:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 18:55 start_atlas.sh
[2025-06-04 21:57:51] drwxrwx--x 2 boincer umatlas      4096 Jun  4 18:55 shared
[2025-06-04 21:57:51] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 18:55 input.tar.gz
[2025-06-04 21:57:51] -rw-r--r-- 1 boincer umatlas         0 Jun  4 18:55 boinc_lockfile
[2025-06-04 21:57:51] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 18:55 pandaJob.out
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas    987032 Jun  4 18:55 agis_schedconf.cvmfs.json
[2025-06-04 21:57:51] drwx------ 4 boincer umatlas      4096 Jun  4 18:55 pilot3
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas 181479114 Jun  4 21:55 HITS.45006595._014335.pool.root.1
[2025-06-04 21:57:51] -rw-r--r-- 1 boincer umatlas       530 Jun  4 21:56 boinc_task_state.xml
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas      1049 Jun  4 21:56 memory_monitor_summary.json
[2025-06-04 21:57:51] -rw-r--r-- 1 boincer umatlas      6267 Jun  4 21:56 init_data.xml
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas   1598969 Jun  4 21:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas    370882 Jun  4 21:57 log.45006595._014335.job.log.tgz.1
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas        95 Jun  4 21:57 pilot_heartbeat.json
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas      7736 Jun  4 21:57 heartbeat.json
[2025-06-04 21:57:51] -rw-r--r-- 1 boincer umatlas        28 Jun  4 21:57 wrapper_checkpoint.txt
[2025-06-04 21:57:51] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 21:57 boinc_mmap_file
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas      4476 Jun  4 21:57 pilotlog.txt
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas    973796 Jun  4 21:57 log.45006595._014335.job.log.1
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas       357 Jun  4 21:57 output.list
[2025-06-04 21:57:51] -rw-r--r-- 1 boincer umatlas       620 Jun  4 21:57 runtime_log
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas   1361920 Jun  4 21:57 result.tar.gz
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas       663 Jun  4 21:57 zlrLDmypTg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmw8gKDmYTn6Qn.diag
[2025-06-04 21:57:51] -rw-r--r-- 1 boincer umatlas      8670 Jun  4 21:57 runtime_log.err
[2025-06-04 21:57:51] -rw-r--r-- 1 boincer umatlas     20923 Jun  4 21:57 stderr.txt
[2025-06-04 21:57:51] HITS file was successfully produced:
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas 181479114 Jun  4 21:55 shared/HITS.pool.root.1
[2025-06-04 21:57:51]  *** Contents of shared directory: ***
[2025-06-04 21:57:51] total 393640
[2025-06-04 21:57:51] -rw-r--r-- 2 boincer umatlas 219701979 Jun  4 18:55 ATLAS.root_0
[2025-06-04 21:57:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 18:55 start_atlas.sh
[2025-06-04 21:57:51] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 18:55 input.tar.gz
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas 181479114 Jun  4 21:55 HITS.pool.root.1
[2025-06-04 21:57:51] -rw------- 1 boincer umatlas   1361920 Jun  4 21:57 result.tar.gz
21:57:53 (22341): run_atlas exited; CPU time 37272.868284
21:57:53 (22341): called boinc_finish(0)

</stderr_txt>
]]>

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