Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:53:20 (4161130): wrapper (7.7.26015): starting
18:53:20 (4161130): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:53:20] Arguments: --nthreads 8
[2025-06-04 18:53:20] Threads: 8
[2025-06-04 18:53:20] Checking for CVMFS
[2025-06-04 18:53:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:53:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:53:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:53:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:53:20] 2.12.6.0 65732 354 126424 146797 2 554 30071325 40960000 34347 16776704 0 2835327 99.881 1157165 36168 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 18:53:20] CVMFS is ok
[2025-06-04 18:53:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:53:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:53:20] Further information can be found at the LHC@home message board.
[2025-06-04 18:53:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:53:20] Checking for apptainer binary...
[2025-06-04 18:53:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:53:20] Running /usr/bin/apptainer --version
[2025-06-04 18:53:20] apptainer version 1.4.1-1.el9
[2025-06-04 18:53:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:53:20] c8-16-2.aglt2.org
[2025-06-04 18:53:20] apptainer works
[2025-06-04 18:53:20] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:53:20] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:53:20] Starting ATLAS job with PandaID=6668210808
[2025-06-04 18:53:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:09:40]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:09:40]  is_tar=False
[2025-06-04 20:09:40]  lfn=log.44871837._080448.job.log.tgz.1
[2025-06-04 20:09:40]  mtime=0
[2025-06-04 20:09:40]  protocol_id=None
[2025-06-04 20:09:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 20:09:40]  replicas=None
[2025-06-04 20:09:40]  scope=mc23_13p6TeV
[2025-06-04 20:09:40]  status=None
[2025-06-04 20:09:40]  status_code=0
[2025-06-04 20:09:40]  storage_token=
[2025-06-04 20:09:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668210808/log.44871837._080448.job.log.tgz.1
[2025-06-04 20:09:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/3b/log.44871837._080448.job.log.tgz.1
[2025-06-04 20:09:40]  workdir=None
[2025-06-04 20:09:40] ]
[2025-06-04 20:09:40] 2025-06-05 00:09:12,708 | INFO     | transferring file log.44871837._080448.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668210808/log.44871837._080448.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 20:09:40] 2025-06-05 00:09:12,708 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668210808/log.44871837._080448.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._080448.job
[2025-06-04 20:09:40] 2025-06-05 00:09:12,723 | INFO     | adding to output.list: log.44871837._080448.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/3b/log.44871837._080448.job.log.tg
[2025-06-04 20:09:40] 2025-06-05 00:09:12,724 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 20:09:40] 2025-06-05 00:09:12,724 | INFO     | summary of transferred files:
[2025-06-04 20:09:40] 2025-06-05 00:09:12,724 | INFO     |  -- lfn=log.44871837._080448.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 20:09:40] 2025-06-05 00:09:12,724 | INFO     | stage-out finished correctly
[2025-06-04 20:09:40] 2025-06-05 00:09:14,450 | WARNING  | process 4179607 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 20:09:40] 2025-06-05 00:09:14,450 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668210808/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:09:40] 2025-06-05 00:09:14,797 | INFO     | number of running child processes to parent process 4179607: 1
[2025-06-04 20:09:40] 2025-06-05 00:09:14,797 | INFO     | maximum number of monitored processes: 6
[2025-06-04 20:09:40] 2025-06-05 00:09:15,235 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 20:09:40] 2025-06-05 00:09:15,284 | INFO     | job 6668210808 has state=finished
[2025-06-04 20:09:40] 2025-06-05 00:09:15,284 | INFO     | preparing for final server update for job 6668210808 in state='finished'
[2025-06-04 20:09:40] 2025-06-05 00:09:15,284 | INFO     | this job has now completed (state=finished)
[2025-06-04 20:09:40] 2025-06-05 00:09:15,284 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 20:09:40] 2025-06-05 00:09:15,284 | INFO     | log transfer has been attempted: DONE
[2025-06-04 20:09:40] 2025-06-05 00:09:15,284 | INFO     | job 6668210808 has finished - writing final server update
[2025-06-04 20:09:40] 2025-06-05 00:09:15,285 | INFO     | total number of processed events: 400 (read)
[2025-06-04 20:09:40] 2025-06-05 00:09:15,303 | INFO     | executing command: lscpu
[2025-06-04 20:09:40] 2025-06-05 00:09:15,375 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 20:09:40] 2025-06-05 00:09:17,301 | INFO     | monitor loop #319: job 0:6668210808 is in state 'finished'
[2025-06-04 20:09:40] 2025-06-05 00:09:17,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:09:40] 2025-06-05 00:09:19,804 | INFO     | monitor loop #320: job 0:6668210808 is in state 'finished'
[2025-06-04 20:09:40] 2025-06-05 00:09:19,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:09:40] 2025-06-05 00:09:20,259 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 20:09:40] 2025-06-05 00:09:20,260 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668210808/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:09:40] 2025-06-05 00:09:20,260 | INFO     | extracted standard info from prmon json
[2025-06-04 20:09:40] 2025-06-05 00:09:20,260 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:09:40] 2025-06-05 00:09:20,260 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:09:40] 2025-06-05 00:09:20,275 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:09:40] 2025-06-05 00:09:20,275 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:09:40] 2025-06-05 00:09:20,276 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:09:40] 2025-06-05 00:09:20,276 | INFO     | sum of square deviations: 93240818.0
[2025-06-04 20:09:40] 2025-06-05 00:09:20,277 | INFO     | sum of deviations: -3791511364.0000014
[2025-06-04 20:09:40] 2025-06-05 00:09:20,277 | INFO     | mean x: 1749079956.0
[2025-06-04 20:09:40] 2025-06-05 00:09:20,277 | INFO     | mean y: 2238518.9552238807
[2025-06-04 20:09:40] 2025-06-05 00:09:20,277 | INFO     | -- intersect: 71126201950.0635
[2025-06-04 20:09:40] 2025-06-05 00:09:20,277 | INFO     | intersect: 71126201950.0635
[2025-06-04 20:09:40] 2025-06-05 00:09:20,277 | INFO     | chi2: 0.0445750350421347
[2025-06-04 20:09:40] 2025-06-05 00:09:20,277 | INFO     | -- intersect: 71126201950.0635
[2025-06-04 20:09:40] 2025-06-05 00:09:20,277 | INFO     | current memory leak: -40.66 B/s (using 67 data points, chi2=0.04)
[2025-06-04 20:09:40] 2025-06-05 00:09:20,277 | INFO     | ..............................
[2025-06-04 20:09:40] 2025-06-05 00:09:20,277 | INFO     | . Timing measurements:
[2025-06-04 20:09:40] 2025-06-05 00:09:20,277 | INFO     | . get job = 0 s
[2025-06-04 20:09:40] 2025-06-05 00:09:20,277 | INFO     | . initial setup = 2 s
[2025-06-04 20:09:40] 2025-06-05 00:09:20,278 | INFO     | . payload setup = 6 s
[2025-06-04 20:09:40] 2025-06-05 00:09:20,278 | INFO     | . stage-in = 0 s
[2025-06-04 20:09:40] 2025-06-05 00:09:20,278 | INFO     | . payload execution = 4514 s
[2025-06-04 20:09:40] 2025-06-05 00:09:20,278 | INFO     | . stage-out = 0 s
[2025-06-04 20:09:40] 2025-06-05 00:09:20,278 | INFO     | . log creation = 0 s
[2025-06-04 20:09:40] 2025-06-05 00:09:20,278 | INFO     | ..............................
[2025-06-04 20:09:40] 2025-06-05 00:09:20,335 | INFO     | 
[2025-06-04 20:09:40] 2025-06-05 00:09:20,336 | INFO     | job summary report
[2025-06-04 20:09:40] 2025-06-05 00:09:20,336 | INFO     | --------------------------------------------------
[2025-06-04 20:09:40] 2025-06-05 00:09:20,336 | INFO     | PanDA job id: 6668210808
[2025-06-04 20:09:40] 2025-06-05 00:09:20,336 | INFO     | task id: 44871837
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | errors: (none)
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | pilot state: finished 
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | transexitcode: 0
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | exeerrorcode: 0
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | exeerrordiag: 
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | exitcode: 0
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | exitmsg: OK
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | cpuconsumptiontime: 27796 s
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | nevents: 400
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | neventsw: 0
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | pid: 4179607
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | pgrp: 4179607
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | corecount: 8
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | event service: False
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | sizes: {0: 2396564, 1: 2397420, 6: 2397626, 11: 2397654, 4524: 2423720, 4525: 2423719, 4526: 2432844, 4528: 2432900, 4533: 2433070}
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | --------------------------------------------------
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | 
[2025-06-04 20:09:40] 2025-06-05 00:09:20,337 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 20:09:40] 2025-06-05 00:09:20,363 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:09:40] 2025-06-05 00:09:20,364 | INFO     | job 6668210808 has completed (purged errors)
[2025-06-04 20:09:40] 2025-06-05 00:09:20,365 | INFO     | overall cleanup function is called
[2025-06-04 20:09:40] 2025-06-05 00:09:21,376 | INFO     | --- collectZombieJob: --- 10, [4179607]
[2025-06-04 20:09:40] 2025-06-05 00:09:21,376 | INFO     | zombie collector waiting for pid 4179607
[2025-06-04 20:09:40] 2025-06-05 00:09:21,377 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:09:40] 2025-06-05 00:09:21,377 | INFO     | collected zombie processes
[2025-06-04 20:09:40] 2025-06-05 00:09:21,377 | INFO     | will attempt to kill all subprocesses of pid=4179607
[2025-06-04 20:09:40] 2025-06-05 00:09:21,757 | INFO     | process IDs to be killed: [4179607] (in reverse order)
[2025-06-04 20:09:40] 2025-06-05 00:09:21,906 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:09:40] 2025-06-05 00:09:21,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:09:40] 2025-06-05 00:09:21,929 | INFO     | did not find any defunct processes belonging to 4179607
[2025-06-04 20:09:40] 2025-06-05 00:09:21,951 | INFO     | did not find any defunct processes belonging to 4179607
[2025-06-04 20:09:40] 2025-06-05 00:09:21,951 | INFO     | ready for new job
[2025-06-04 20:09:40] 2025-06-05 00:09:21,951 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:09:40] 2025-06-05 00:09:21,953 | INFO     | **************************************
[2025-06-04 20:09:40] 2025-06-05 00:09:21,953 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:09:40] 2025-06-05 00:09:21,953 | INFO     | **************************************
[2025-06-04 20:09:40] 2025-06-05 00:09:21,953 | INFO     | 
[2025-06-04 20:09:40] 2025-06-05 00:09:21,971 | INFO     | architecture information:
[2025-06-04 20:09:40] 2025-06-05 00:09:21,971 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:09:40] 2025-06-05 00:09:21,985 | INFO     | cat /etc/os-release:
[2025-06-04 20:09:40] NAME="CentOS Linux"
[2025-06-04 20:09:40] VERSION="7 (Core)"
[2025-06-04 20:09:40] ID="centos"
[2025-06-04 20:09:40] ID_LIKE="rhel fedora"
[2025-06-04 20:09:40] VERSION_ID="7"
[2025-06-04 20:09:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:09:40] ANSI_COLOR="0;31"
[2025-06-04 20:09:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:09:40] HOME_URL="https://www.centos.org/"
[2025-06-04 20:09:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:09:40] 
[2025-06-04 20:09:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:09:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:09:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:09:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:09:40] 
[2025-06-04 20:09:40] 2025-06-05 00:09:21,985 | INFO     | **************************************
[2025-06-04 20:09:40] 2025-06-05 00:09:22,488 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 20:09:40] 2025-06-05 00:09:22,503 | INFO     | sufficient remaining disk space (173067468800 B)
[2025-06-04 20:09:40] 2025-06-05 00:09:22,504 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:09:40] 2025-06-05 00:09:22,504 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:09:40] 2025-06-05 00:09:22,504 | INFO     | update_server=False
[2025-06-04 20:09:40] 2025-06-05 00:09:22,504 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:09:40] 2025-06-05 00:09:22,504 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 20:09:40] 2025-06-05 00:09:22,504 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:09:40] 2025-06-05 00:09:22,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:09:40] 2025-06-05 00:09:22,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:09:40] 2025-06-05 00:09:22,558 | INFO     | all data control threads have been joined
[2025-06-04 20:09:40] 2025-06-05 00:09:22,963 | INFO     | all job control threads have been joined
[2025-06-04 20:09:40] 2025-06-05 00:09:23,300 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:09:40] 2025-06-05 00:09:23,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:09:40] 2025-06-05 00:09:23,314 | INFO     | aborting loop
[2025-06-04 20:09:40] 2025-06-05 00:09:23,509 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:23,564 | INFO     | [data] control thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:23,805 | INFO     | all payload control threads have been joined
[2025-06-04 20:09:40] 2025-06-05 00:09:23,968 | INFO     | [job] control thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:23,997 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:24,113 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:24,149 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:24,220 | INFO     | [job] validate thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:24,320 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:24,468 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:24,582 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:24,809 | INFO     | [payload] control thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:25,028 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:25,305 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:25,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:09:40] 2025-06-05 00:09:25,794 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:09:40] 2025-06-05 00:09:26,352 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:29,800 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:33,433 | INFO     | job.realtimelogging is not enabled
[2025-06-04 20:09:40] 2025-06-05 00:09:34,438 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:09:40] 2025-06-05 00:09:34,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140714459973440)>', '<ExcThread(monitor, started 140713505310464)>']
[2025-06-04 20:09:40] 2025-06-05 00:09:35,572 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:09:40] 2025-06-05 00:09:35,572 | INFO     | [monitor] control thread has ended
[2025-06-04 20:09:40] 2025-06-05 00:09:39,978 | INFO     | all workflow threads have been joined
[2025-06-04 20:09:40] 2025-06-05 00:09:39,978 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:09:40] 2025-06-05 00:09:39,978 | INFO     | traces error code: 0
[2025-06-04 20:09:40] 2025-06-05 00:09:39,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:09:40] 2025-06-05 00:09:40,196 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:09:40] 2025-06-05 00:09:40,198 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:09:40] 2025-06-05 00:09:40,201 [wrapper] pilotpid: 4165016
[2025-06-04 20:09:40] 2025-06-05 00:09:40,204 [wrapper] Pilot exit status: 0
[2025-06-04 20:09:40] 2025-06-05 00:09:40,241 [wrapper] pandaids: 6668210808
[2025-06-04 20:09:40] 2025-06-05 00:09:40,359 [wrapper] cleanup supervisor_pilot  984683 4165017
[2025-06-04 20:09:40] 2025-06-05 00:09:40,364 [wrapper] Test setup, not cleaning
[2025-06-04 20:09:40] 2025-06-05 00:09:40,367 [wrapper] apfmon messages muted
[2025-06-04 20:09:40] 2025-06-05 00:09:40,370 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:09:40] 2025-06-05 00:09:40,372 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:09:40]  *** Error codes and diagnostics ***
[2025-06-04 20:09:40]     "exeErrorCode": 0,
[2025-06-04 20:09:40]     "exeErrorDiag": "",
[2025-06-04 20:09:40]     "pilotErrorCode": 0,
[2025-06-04 20:09:40]     "pilotErrorDiag": "",
[2025-06-04 20:09:40]  *** Listing of results directory ***
[2025-06-04 20:09:40] total 417328
[2025-06-04 20:09:40] -rw-r--r--. 1 boincer umatlas    495897 May 28 02:52 pilot3.tar.gz
[2025-06-04 20:09:40] -rw-r--r--. 1 boincer umatlas      5111 May 28 03:02 queuedata.json
[2025-06-04 20:09:40] -rwx------. 1 boincer umatlas     37140 May 28 03:02 runpilot2-wrapper.sh
[2025-06-04 20:09:40] -rw-r--r--. 1 boincer umatlas       100 Jun  4 18:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:09:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 18:53 run_atlas
[2025-06-04 20:09:40] -rw-r--r--. 1 boincer umatlas       105 Jun  4 18:53 job.xml
[2025-06-04 20:09:40] -rw-r--r--. 2 boincer umatlas 224487871 Jun  4 18:53 EVNT.44871834._003141.pool.root.1
[2025-06-04 20:09:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 18:53 start_atlas.sh
[2025-06-04 20:09:40] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 18:53 shared
[2025-06-04 20:09:40] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 18:53 input.tar.gz
[2025-06-04 20:09:40] -rw-r--r--. 1 boincer umatlas         0 Jun  4 18:53 boinc_lockfile
[2025-06-04 20:09:40] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 18:53 pandaJob.out
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas    987032 Jun  4 18:53 agis_schedconf.cvmfs.json
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas   1598969 Jun  4 18:53 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:09:40] drwx------. 4 boincer umatlas      4096 Jun  4 18:53 pilot3
[2025-06-04 20:09:40] -rw-r--r--. 1 boincer umatlas      7158 Jun  4 20:01 init_data.xml
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas 197533367 Jun  4 20:08 HITS.44871837._080448.pool.root.1
[2025-06-04 20:09:40] -rw-r--r--. 1 boincer umatlas       530 Jun  4 20:08 boinc_task_state.xml
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas        95 Jun  4 20:08 pilot_heartbeat.json
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas      1043 Jun  4 20:09 memory_monitor_summary.json
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas    303767 Jun  4 20:09 log.44871837._080448.job.log.tgz.1
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas      7708 Jun  4 20:09 heartbeat.json
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas      4549 Jun  4 20:09 pilotlog.txt
[2025-06-04 20:09:40] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 20:09 boinc_mmap_file
[2025-06-04 20:09:40] -rw-r--r--. 1 boincer umatlas        27 Jun  4 20:09 wrapper_checkpoint.txt
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas    440507 Jun  4 20:09 log.44871837._080448.job.log.1
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas       357 Jun  4 20:09 output.list
[2025-06-04 20:09:40] -rw-r--r--. 1 boincer umatlas       620 Jun  4 20:09 runtime_log
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas    768000 Jun  4 20:09 result.tar.gz
[2025-06-04 20:09:40] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 20:09 runtime_log.err
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas       654 Jun  4 20:09 mMZMDmDzPe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLVbKDmPPVznm.diag
[2025-06-04 20:09:40] -rw-r--r--. 1 boincer umatlas     21529 Jun  4 20:09 stderr.txt
[2025-06-04 20:09:40] HITS file was successfully produced:
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas 197533367 Jun  4 20:08 shared/HITS.pool.root.1
[2025-06-04 20:09:40]  *** Contents of shared directory: ***
[2025-06-04 20:09:40] total 413404
[2025-06-04 20:09:40] -rw-r--r--. 2 boincer umatlas 224487871 Jun  4 18:53 ATLAS.root_0
[2025-06-04 20:09:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 18:53 start_atlas.sh
[2025-06-04 20:09:40] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 18:53 input.tar.gz
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas 197533367 Jun  4 20:08 HITS.pool.root.1
[2025-06-04 20:09:40] -rw-------. 1 boincer umatlas    768000 Jun  4 20:09 result.tar.gz
20:09:42 (4161130): run_atlas exited; CPU time 27901.160964
20:09:42 (4161130): called boinc_finish(0)

</stderr_txt>
]]>

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