Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:00:03 (2039396): wrapper (7.7.26015): starting
15:00:03 (2039396): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 15:00:03] Arguments: --nthreads 12
[2025-06-05 15:00:03] Threads: 12
[2025-06-05 15:00:03] Checking for CVMFS
[2025-06-05 15:00:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 15:00:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 15:00:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 15:00:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 15:00:04] 2.12.7.0 2502 2772 60988 146822 0 56 3247478 4096001 912 130560 0 5630022 99.993 823976 120 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 15:00:04] CVMFS is ok
[2025-06-05 15:00:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 15:00:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 15:00:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 15:00:04] Further information can be found at the LHC@home message board.
[2025-06-05 15:00:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:00:04] Checking for apptainer binary...
[2025-06-05 15:00:04] apptainer is not installed, using version from CVMFS
[2025-06-05 15:00:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:00:04] ryzen4700s
[2025-06-05 15:00:04] apptainer works
[2025-06-05 15:00:04] Set ATHENA_PROC_NUMBER=12
[2025-06-05 15:00:04] Set ATHENA_CORE_NUMBER=12
[2025-06-05 15:00:04] Starting ATLAS job with PandaID=6668326338
[2025-06-05 15:00:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:05:25]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:05:25]  is_altstaged=None
[2025-06-05 16:05:25]  is_tar=False
[2025-06-05 16:05:25]  lfn=log.44871837._082742.job.log.tgz.1
[2025-06-05 16:05:25]  mtime=0
[2025-06-05 16:05:25]  protocol_id=None
[2025-06-05 16:05:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 16:05:25]  replicas=None
[2025-06-05 16:05:25]  scope=mc23_13p6TeV
[2025-06-05 16:05:25]  status=None
[2025-06-05 16:05:25]  status_code=0
[2025-06-05 16:05:25]  storage_token=
[2025-06-05 16:05:25]  surl=/opt/boinc/instance_homes/boinc_31417/slots/4/PanDA_Pilot-6668326338/log.44871837._082742.job.log.tgz.1
[2025-06-05 16:05:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/52/log.44871837._082742.job.log.tgz.1
[2025-06-05 16:05:25]  workdir=None
[2025-06-05 16:05:25] ]
[2025-06-05 16:05:25] 2025-06-05 16:05:05,801 | INFO     | transferring file log.44871837._082742.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/4/PanDA_Pilot-6668326338/log.44871837._082742.job.log.tgz.1 t
[2025-06-05 16:05:25] 2025-06-05 16:05:05,801 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/4/PanDA_Pilot-6668326338/log.44871837._082742.job.log.tgz.1 /opt/boinc/instance_home
[2025-06-05 16:05:25] 2025-06-05 16:05:05,817 | INFO     | adding to output.list: log.44871837._082742.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/52/log.44871837._082742.job.log.tg
[2025-06-05 16:05:25] 2025-06-05 16:05:05,818 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 16:05:25] 2025-06-05 16:05:05,818 | INFO     | summary of transferred files:
[2025-06-05 16:05:25] 2025-06-05 16:05:05,818 | INFO     |  -- lfn=log.44871837._082742.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 16:05:25] 2025-06-05 16:05:05,818 | INFO     | stage-out finished correctly
[2025-06-05 16:05:25] 2025-06-05 16:05:05,954 | INFO     | PID=2043071 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 16:05:25] 2025-06-05 16:05:06,505 | INFO     | monitor loop #260: job 0:6668326338 is in state 'finished'
[2025-06-05 16:05:25] 2025-06-05 16:05:06,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:05:25] 2025-06-05 16:05:09,005 | INFO     | monitor loop #261: job 0:6668326338 is in state 'finished'
[2025-06-05 16:05:25] 2025-06-05 16:05:09,006 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:05:25] 2025-06-05 16:05:09,253 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 16:05:25] 2025-06-05 16:05:09,304 | INFO     | job 6668326338 has state=finished
[2025-06-05 16:05:25] 2025-06-05 16:05:09,304 | INFO     | preparing for final server update for job 6668326338 in state='finished'
[2025-06-05 16:05:25] 2025-06-05 16:05:09,305 | INFO     | this job has now completed (state=finished)
[2025-06-05 16:05:25] 2025-06-05 16:05:09,305 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 16:05:25] 2025-06-05 16:05:09,305 | INFO     | log transfer has been attempted: DONE
[2025-06-05 16:05:25] 2025-06-05 16:05:09,305 | INFO     | job 6668326338 has finished - writing final server update
[2025-06-05 16:05:25] 2025-06-05 16:05:09,305 | INFO     | total number of processed events: 400 (read)
[2025-06-05 16:05:25] 2025-06-05 16:05:09,326 | INFO     | executing command: lscpu
[2025-06-05 16:05:25] 2025-06-05 16:05:09,365 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 16:05:25] 2025-06-05 16:05:11,507 | INFO     | monitor loop #262: job 0:6668326338 is in state 'finished'
[2025-06-05 16:05:25] 2025-06-05 16:05:11,507 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:05:25] 2025-06-05 16:05:12,024 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 16:05:25] 2025-06-05 16:05:12,024 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/4/PanDA_Pilot-6668326338/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:05:25] 2025-06-05 16:05:12,025 | INFO     | extracted standard info from prmon json
[2025-06-05 16:05:25] 2025-06-05 16:05:12,025 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 16:05:25] 2025-06-05 16:05:12,025 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 16:05:25] 2025-06-05 16:05:12,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 16:05:25] 2025-06-05 16:05:12,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 16:05:25] 2025-06-05 16:05:12,026 | INFO     | fitting pss+swap vs Time
[2025-06-05 16:05:25] 2025-06-05 16:05:12,026 | INFO     | sum of square deviations: 57407588.0
[2025-06-05 16:05:25] 2025-06-05 16:05:12,026 | INFO     | sum of deviations: -4843651320.000001
[2025-06-05 16:05:25] 2025-06-05 16:05:12,026 | INFO     | mean x: 1749137665.0
[2025-06-05 16:05:25] 2025-06-05 16:05:12,026 | INFO     | mean y: 2774737.6315789474
[2025-06-05 16:05:25] 2025-06-05 16:05:12,026 | INFO     | -- intersect: 147582794297.74567
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | intersect: 147582794297.74567
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | chi2: 0.0964542552670743
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | -- intersect: 147582794297.74567
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | current memory leak: -84.37 B/s (using 57 data points, chi2=0.10)
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | ..............................
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | . Timing measurements:
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | . get job = 0 s
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | . initial setup = 13 s
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | . payload setup = 6 s
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | . stage-in = 0 s
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | . payload execution = 3855 s
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | . stage-out = 0 s
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | . log creation = 0 s
[2025-06-05 16:05:25] 2025-06-05 16:05:12,027 | INFO     | ..............................
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | 
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | job summary report
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | --------------------------------------------------
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | PanDA job id: 6668326338
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | task id: 44871837
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | errors: (none)
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | pilot state: finished 
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | transexitcode: 0
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | exeerrorcode: 0
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | exeerrordiag: 
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | exitcode: 0
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | exitmsg: OK
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | cpuconsumptiontime: 37630 s
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | nevents: 400
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | neventsw: 0
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | pid: 2049654
[2025-06-05 16:05:25] 2025-06-05 16:05:12,084 | INFO     | pgrp: 2049654
[2025-06-05 16:05:25] 2025-06-05 16:05:12,085 | INFO     | corecount: 12
[2025-06-05 16:05:25] 2025-06-05 16:05:12,085 | INFO     | event service: False
[2025-06-05 16:05:25] 2025-06-05 16:05:12,085 | INFO     | sizes: {0: 2397188, 1: 2397443, 5: 2397649, 12: 2397705, 3864: 2423241, 3865: 2423240, 3866: 2432411, 3869: 2432467, 3872: 2432637}
[2025-06-05 16:05:25] 2025-06-05 16:05:12,085 | INFO     | --------------------------------------------------
[2025-06-05 16:05:25] 2025-06-05 16:05:12,085 | INFO     | 
[2025-06-05 16:05:25] 2025-06-05 16:05:12,085 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/4
[2025-06-05 16:05:25] 2025-06-05 16:05:12,100 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,100 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,100 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,100 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,100 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | job 6668326338 has completed (purged errors)
[2025-06-05 16:05:25] 2025-06-05 16:05:12,101 | INFO     | overall cleanup function is called
[2025-06-05 16:05:25] 2025-06-05 16:05:13,109 | INFO     | --- collectZombieJob: --- 10, [2049654]
[2025-06-05 16:05:25] 2025-06-05 16:05:13,109 | INFO     | zombie collector waiting for pid 2049654
[2025-06-05 16:05:25] 2025-06-05 16:05:13,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:05:25] 2025-06-05 16:05:13,109 | INFO     | collected zombie processes
[2025-06-05 16:05:25] 2025-06-05 16:05:13,109 | INFO     | will attempt to kill all subprocesses of pid=2049654
[2025-06-05 16:05:25] 2025-06-05 16:05:13,149 | INFO     | process IDs to be killed: [2049654] (in reverse order)
[2025-06-05 16:05:25] 2025-06-05 16:05:13,179 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:05:25] 2025-06-05 16:05:13,179 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:05:25] 2025-06-05 16:05:13,181 | INFO     | did not find any defunct processes belonging to 2049654
[2025-06-05 16:05:25] 2025-06-05 16:05:13,182 | INFO     | did not find any defunct processes belonging to 2049654
[2025-06-05 16:05:25] 2025-06-05 16:05:13,183 | INFO     | ready for new job
[2025-06-05 16:05:25] 2025-06-05 16:05:13,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:05:25] 2025-06-05 16:05:13,183 | INFO     | **************************************
[2025-06-05 16:05:25] 2025-06-05 16:05:13,184 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:05:25] 2025-06-05 16:05:13,184 | INFO     | **************************************
[2025-06-05 16:05:25] 2025-06-05 16:05:13,184 | INFO     | 
[2025-06-05 16:05:25] 2025-06-05 16:05:13,201 | INFO     | architecture information:
[2025-06-05 16:05:25] 2025-06-05 16:05:13,202 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:05:25] 2025-06-05 16:05:13,219 | INFO     | cat /etc/os-release:
[2025-06-05 16:05:25] NAME="CentOS Linux"
[2025-06-05 16:05:25] VERSION="7 (Core)"
[2025-06-05 16:05:25] ID="centos"
[2025-06-05 16:05:25] ID_LIKE="rhel fedora"
[2025-06-05 16:05:25] VERSION_ID="7"
[2025-06-05 16:05:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:05:25] ANSI_COLOR="0;31"
[2025-06-05 16:05:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:05:25] HOME_URL="https://www.centos.org/"
[2025-06-05 16:05:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:05:25] 
[2025-06-05 16:05:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:05:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:05:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:05:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:05:25] 
[2025-06-05 16:05:25] 2025-06-05 16:05:13,219 | INFO     | **************************************
[2025-06-05 16:05:25] 2025-06-05 16:05:13,721 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/4
[2025-06-05 16:05:25] 2025-06-05 16:05:13,737 | INFO     | sufficient remaining disk space (121976651776 B)
[2025-06-05 16:05:25] 2025-06-05 16:05:13,737 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:05:25] 2025-06-05 16:05:13,737 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:05:25] 2025-06-05 16:05:13,738 | INFO     | update_server=False
[2025-06-05 16:05:25] 2025-06-05 16:05:13,738 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:05:25] 2025-06-05 16:05:13,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:05:25] 2025-06-05 16:05:13,882 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:05:25] 2025-06-05 16:05:13,957 | INFO     | all payload control threads have been joined
[2025-06-05 16:05:25] 2025-06-05 16:05:13,969 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:05:25] 2025-06-05 16:05:13,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:05:25] 2025-06-05 16:05:13,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:05:25] 2025-06-05 16:05:14,009 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 16:05:25] 2025-06-05 16:05:14,009 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 16:05:25] 2025-06-05 16:05:14,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:05:25] 2025-06-05 16:05:14,009 | INFO     | will abort loop
[2025-06-05 16:05:25] 2025-06-05 16:05:14,323 | INFO     | all data control threads have been joined
[2025-06-05 16:05:25] 2025-06-05 16:05:14,741 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:14,741 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:14,814 | INFO     | [job] validate thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:14,925 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:14,961 | INFO     | [payload] control thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:15,013 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:15,093 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:15,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:05:25] 2025-06-05 16:05:15,325 | INFO     | [data] control thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:15,385 | INFO     | all job control threads have been joined
[2025-06-05 16:05:25] 2025-06-05 16:05:15,637 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:15,645 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:15,885 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:15,905 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:15,917 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:16,054 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:16,389 | INFO     | [job] control thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:19,313 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:05:25] 2025-06-05 16:05:20,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998149175104)>', '<ExcThread(monitor, started 139997839599360)>']
[2025-06-05 16:05:25] 2025-06-05 16:05:20,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:05:25] 2025-06-05 16:05:20,997 | INFO     | [monitor] control thread has ended
[2025-06-05 16:05:25] 2025-06-05 16:05:25,069 | INFO     | all workflow threads have been joined
[2025-06-05 16:05:25] 2025-06-05 16:05:25,069 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:05:25] 2025-06-05 16:05:25,070 | INFO     | traces error code: 0
[2025-06-05 16:05:25] 2025-06-05 16:05:25,070 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:05:25] 2025-06-05 16:05:25,172 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:05:25] 2025-06-05 16:05:25,174 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:05:25] 2025-06-05 16:05:25,176 [wrapper] pilotpid: 2043071
[2025-06-05 16:05:25] 2025-06-05 16:05:25,178 [wrapper] Pilot exit status: 0
[2025-06-05 16:05:25] 2025-06-05 16:05:25,187 [wrapper] pandaids: 6668326338
[2025-06-05 16:05:25] 2025-06-05 16:05:25,203 [wrapper] cleanup supervisor_pilot 2063076 2043072
[2025-06-05 16:05:25] 2025-06-05 16:05:25,205 [wrapper] Test setup, not cleaning
[2025-06-05 16:05:25] 2025-06-05 16:05:25,206 [wrapper] apfmon messages muted
[2025-06-05 16:05:25] 2025-06-05 16:05:25,208 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:05:25] 2025-06-05 16:05:25,210 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:05:25]  *** Error codes and diagnostics ***
[2025-06-05 16:05:25]     "exeErrorCode": 0,
[2025-06-05 16:05:25]     "exeErrorDiag": "",
[2025-06-05 16:05:25]     "pilotErrorCode": 0,
[2025-06-05 16:05:25]     "pilotErrorDiag": "",
[2025-06-05 16:05:25]  *** Listing of results directory ***
[2025-06-05 16:05:25] total 411272
[2025-06-05 16:05:25] -rw-r--r-- 1 boinc boinc    495897 May 28 10:20 pilot3.tar.gz
[2025-06-05 16:05:25] -rw-r--r-- 1 boinc boinc      5111 May 28 10:23 queuedata.json
[2025-06-05 16:05:25] -rwx------ 1 boinc boinc     37140 May 28 10:24 runpilot2-wrapper.sh
[2025-06-05 16:05:25] -rw-rw-r-- 1 boinc boinc       100 Jun  5 15:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:05:25] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 15:00 run_atlas
[2025-06-05 16:05:25] -rw-rw-r-- 1 boinc boinc       105 Jun  5 15:00 job.xml
[2025-06-05 16:05:25] -rw-r--r-- 2 boinc boinc 221561601 Jun  5 15:00 EVNT.44871834._003229.pool.root.1
[2025-06-05 16:05:25] -rw-rw-r-- 1 boinc boinc      9446 Jun  5 15:00 init_data.xml
[2025-06-05 16:05:25] drwxrwx--x 2 boinc boinc      4096 Jun  5 15:00 shared
[2025-06-05 16:05:25] -rw-r--r-- 2 boinc boinc    508878 Jun  5 15:00 input.tar.gz
[2025-06-05 16:05:25] -rw-r--r-- 2 boinc boinc     15093 Jun  5 15:00 start_atlas.sh
[2025-06-05 16:05:25] -rw-rw-r-- 1 boinc boinc         0 Jun  5 15:00 boinc_lockfile
[2025-06-05 16:05:25] -rw-rw-r-- 1 boinc boinc      2559 Jun  5 15:00 pandaJob.out
[2025-06-05 16:05:25] -rw------- 1 boinc boinc    983210 Jun  5 15:00 agis_schedconf.cvmfs.json
[2025-06-05 16:05:25] -rw------- 1 boinc boinc   1598969 Jun  5 15:00 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:05:25] drwx------ 4 boinc boinc      4096 Jun  5 15:00 pilot3
[2025-06-05 16:05:25] -rw------- 1 boinc boinc 194284473 Jun  5 16:04 HITS.44871837._082742.pool.root.1
[2025-06-05 16:05:25] -rw-rw-r-- 1 boinc boinc       529 Jun  5 16:04 boinc_task_state.xml
[2025-06-05 16:05:25] -rw------- 1 boinc boinc        95 Jun  5 16:04 pilot_heartbeat.json
[2025-06-05 16:05:25] -rw------- 1 boinc boinc      1019 Jun  5 16:05 memory_monitor_summary.json
[2025-06-05 16:05:25] -rw------- 1 boinc boinc    358899 Jun  5 16:05 log.44871837._082742.job.log.tgz.1
[2025-06-05 16:05:25] -rw------- 1 boinc boinc      7664 Jun  5 16:05 heartbeat.json
[2025-06-05 16:05:25] -rw-rw-r-- 1 boinc boinc        27 Jun  5 16:05 wrapper_checkpoint.txt
[2025-06-05 16:05:25] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 16:05 boinc_mmap_file
[2025-06-05 16:05:25] -rw------- 1 boinc boinc      4563 Jun  5 16:05 pilotlog.txt
[2025-06-05 16:05:25] -rw------- 1 boinc boinc    370836 Jun  5 16:05 log.44871837._082742.job.log.1
[2025-06-05 16:05:25] -rw-rw-r-- 1 boinc boinc       620 Jun  5 16:05 runtime_log
[2025-06-05 16:05:25] -rw------- 1 boinc boinc       357 Jun  5 16:05 output.list
[2025-06-05 16:05:25] -rw------- 1 boinc boinc    747520 Jun  5 16:05 result.tar.gz
[2025-06-05 16:05:25] -rw------- 1 boinc boinc       654 Jun  5 16:05 snELDm38Se7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzubKDmyDMfYm.diag
[2025-06-05 16:05:25] -rw-rw-r-- 1 boinc boinc      8973 Jun  5 16:05 runtime_log.err
[2025-06-05 16:05:25] -rw-rw-r-- 1 boinc boinc     21716 Jun  5 16:05 stderr.txt
[2025-06-05 16:05:25] HITS file was successfully produced:
[2025-06-05 16:05:25] -rw------- 1 boinc boinc 194284473 Jun  5 16:04 shared/HITS.pool.root.1
[2025-06-05 16:05:25]  *** Contents of shared directory: ***
[2025-06-05 16:05:25] total 407360
[2025-06-05 16:05:25] -rw-r--r-- 2 boinc boinc 221561601 Jun  5 15:00 ATLAS.root_0
[2025-06-05 16:05:25] -rw-r--r-- 2 boinc boinc    508878 Jun  5 15:00 input.tar.gz
[2025-06-05 16:05:25] -rw-r--r-- 2 boinc boinc     15093 Jun  5 15:00 start_atlas.sh
[2025-06-05 16:05:25] -rw------- 1 boinc boinc 194284473 Jun  5 16:04 HITS.pool.root.1
[2025-06-05 16:05:25] -rw------- 1 boinc boinc    747520 Jun  5 16:05 result.tar.gz
16:05:26 (2039396): run_atlas exited; CPU time 37618.159113
16:05:26 (2039396): called boinc_finish(0)

</stderr_txt>
]]>

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