Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:40:30 (59854): wrapper (7.7.26015): starting
18:40:30 (59854): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:40:30] Arguments: --nthreads 8
[2025-06-04 18:40:30] Threads: 8
[2025-06-04 18:40:30] Checking for CVMFS
[2025-06-04 18:40:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:40:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:40:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:40:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:40:31] 2.11.2.0 39063 13449 272400 146797 2 112 18225162 18432000 18612 130560 1 116067865 99.297 154754120 49086 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 18:40:31] CVMFS is ok
[2025-06-04 18:40:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:40:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:40:31] Further information can be found at the LHC@home message board.
[2025-06-04 18:40:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:40:31] Checking for apptainer binary...
[2025-06-04 18:40:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:40:31] Running /usr/bin/apptainer --version
[2025-06-04 18:40:31] apptainer version 1.3.2-1.el7
[2025-06-04 18:40:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:40:32] c-212-9.aglt2.org
[2025-06-04 18:40:32] apptainer works
[2025-06-04 18:40:33] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:40:33] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:40:33] Starting ATLAS job with PandaID=6667307332
[2025-06-04 18:40:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:46:57]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:46:57] 2025-06-05 00:46:27,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:46:57] 2025-06-05 00:46:30,049 | INFO     | monitor loop #554: job 0:6667307332 is in state 'finished'
[2025-06-04 20:46:57] 2025-06-05 00:46:30,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:46:57] 2025-06-05 00:46:32,554 | INFO     | monitor loop #555: job 0:6667307332 is in state 'finished'
[2025-06-04 20:46:57] 2025-06-05 00:46:32,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:46:57] 2025-06-05 00:46:35,047 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 20:46:57] 2025-06-05 00:46:35,048 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667307332/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:46:57] 2025-06-05 00:46:35,048 | INFO     | extracted standard info from prmon json
[2025-06-04 20:46:57] 2025-06-05 00:46:35,048 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:46:57] 2025-06-05 00:46:35,048 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:46:57] 2025-06-05 00:46:35,049 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:46:57] 2025-06-05 00:46:35,049 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:46:57] 2025-06-05 00:46:35,051 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:46:57] 2025-06-05 00:46:35,051 | INFO     | sum of square deviations: 576983994.9918702
[2025-06-04 20:46:57] 2025-06-05 00:46:35,052 | INFO     | sum of deviations: 937277421.5447149
[2025-06-04 20:46:57] 2025-06-05 00:46:35,052 | INFO     | mean x: 1749080615.00813
[2025-06-04 20:46:57] 2025-06-05 00:46:35,052 | INFO     | mean y: 2529782.4552845526
[2025-06-04 20:46:57] 2025-06-05 00:46:35,052 | INFO     | -- intersect: -2838751402.3577595
[2025-06-04 20:46:57] 2025-06-05 00:46:35,052 | INFO     | intersect: -2838751402.3577595
[2025-06-04 20:46:57] 2025-06-05 00:46:35,052 | INFO     | chi2: 1.6469295745003056
[2025-06-04 20:46:57] 2025-06-05 00:46:35,053 | INFO     | sum of square deviations: 509438847.49152595
[2025-06-04 20:46:57] 2025-06-05 00:46:35,053 | INFO     | sum of deviations: 1164168787.9661055
[2025-06-04 20:46:57] 2025-06-05 00:46:35,053 | INFO     | mean x: 1749080462.5084746
[2025-06-04 20:46:57] 2025-06-05 00:46:35,053 | INFO     | mean y: 2530295.033898305
[2025-06-04 20:46:57] 2025-06-05 00:46:35,053 | INFO     | -- intersect: -3994465403.5078325
[2025-06-04 20:46:57] 2025-06-05 00:46:35,053 | INFO     | intersect: -3994465403.5078325
[2025-06-04 20:46:57] 2025-06-05 00:46:35,054 | INFO     | chi2: 1.6485125615027827
[2025-06-04 20:46:57] 2025-06-05 00:46:35,054 | INFO     | current chi2=1.6485125615027827 (change=-0.09611746774037669 %)
[2025-06-04 20:46:57] 2025-06-05 00:46:35,054 | INFO     | right removable region: 117
[2025-06-04 20:46:57] 2025-06-05 00:46:35,054 | INFO     | sum of square deviations: 509438237.49152595
[2025-06-04 20:46:57] 2025-06-05 00:46:35,054 | INFO     | sum of deviations: -17819398966.203384
[2025-06-04 20:46:57] 2025-06-05 00:46:35,054 | INFO     | mean x: 1749080767.5084746
[2025-06-04 20:46:57] 2025-06-05 00:46:35,055 | INFO     | mean y: 2571333.2033898304
[2025-06-04 20:46:57] 2025-06-05 00:46:35,055 | INFO     | -- intersect: 61182839571.04877
[2025-06-04 20:46:57] 2025-06-05 00:46:35,055 | INFO     | intersect: 61182839571.04877
[2025-06-04 20:46:57] 2025-06-05 00:46:35,055 | INFO     | chi2: 0.12787830100326392
[2025-06-04 20:46:57] 2025-06-05 00:46:35,055 | INFO     | current chi2=0.12787830100326392 (change=92.23535098384133 %)
[2025-06-04 20:46:57] 2025-06-05 00:46:35,055 | INFO     | sum of square deviations: 447380954.9911509
[2025-06-04 20:46:57] 2025-06-05 00:46:35,056 | INFO     | sum of deviations: -16074216838.778765
[2025-06-04 20:46:57] 2025-06-05 00:46:35,056 | INFO     | mean x: 1749080920.0088496
[2025-06-04 20:46:57] 2025-06-05 00:46:35,056 | INFO     | mean y: 2566936.778761062
[2025-06-04 20:46:57] 2025-06-05 00:46:35,056 | INFO     | -- intersect: 62846337247.3612
[2025-06-04 20:46:57] 2025-06-05 00:46:35,056 | INFO     | intersect: 62846337247.3612
[2025-06-04 20:46:57] 2025-06-05 00:46:35,056 | INFO     | chi2: 0.1161764029997462
[2025-06-04 20:46:57] 2025-06-05 00:46:35,056 | INFO     | current chi2=0.1161764029997462 (change=9.15080816034539 %)
[2025-06-04 20:46:57] 2025-06-05 00:46:35,056 | INFO     | left removable region: 20
[2025-06-04 20:46:57] 2025-06-05 00:46:35,056 | INFO     | sum of square deviations: 282972046.9896903
[2025-06-04 20:46:57] 2025-06-05 00:46:35,057 | INFO     | sum of deviations: -8272638629.525774
[2025-06-04 20:46:57] 2025-06-05 00:46:35,057 | INFO     | mean x: 1749081042.0103092
[2025-06-04 20:46:57] 2025-06-05 00:46:35,057 | INFO     | mean y: 2548225.525773196
[2025-06-04 20:46:57] 2025-06-05 00:46:35,057 | INFO     | -- intersect: 51136628599.31214
[2025-06-04 20:46:57] 2025-06-05 00:46:35,057 | INFO     | intersect: 51136628599.31214
[2025-06-04 20:46:57] 2025-06-05 00:46:35,057 | INFO     | chi2: 0.09417241009771225
[2025-06-04 20:46:57] 2025-06-05 00:46:35,057 | INFO     | -- intersect: 51136628599.31214
[2025-06-04 20:46:57] 2025-06-05 00:46:35,057 | INFO     | current memory leak: -29.23 B/s (using 97 data points, chi2=0.09)
[2025-06-04 20:46:57] 2025-06-05 00:46:35,058 | INFO     | ..............................
[2025-06-04 20:46:57] 2025-06-05 00:46:35,058 | INFO     | . Timing measurements:
[2025-06-04 20:46:57] 2025-06-05 00:46:35,058 | INFO     | . get job = 0 s
[2025-06-04 20:46:57] 2025-06-05 00:46:35,058 | INFO     | . initial setup = 2 s
[2025-06-04 20:46:57] 2025-06-05 00:46:35,058 | INFO     | . payload setup = 13 s
[2025-06-04 20:46:57] 2025-06-05 00:46:35,058 | INFO     | . stage-in = 0 s
[2025-06-04 20:46:57] 2025-06-05 00:46:35,058 | INFO     | . payload execution = 7496 s
[2025-06-04 20:46:57] 2025-06-05 00:46:35,058 | INFO     | . stage-out = 1 s
[2025-06-04 20:46:57] 2025-06-05 00:46:35,058 | INFO     | . log creation = 0 s
[2025-06-04 20:46:57] 2025-06-05 00:46:35,058 | INFO     | ..............................
[2025-06-04 20:46:57] 2025-06-05 00:46:35,118 | INFO     | 
[2025-06-04 20:46:57] 2025-06-05 00:46:35,118 | INFO     | job summary report
[2025-06-04 20:46:57] 2025-06-05 00:46:35,118 | INFO     | --------------------------------------------------
[2025-06-04 20:46:57] 2025-06-05 00:46:35,118 | INFO     | PanDA job id: 6667307332
[2025-06-04 20:46:57] 2025-06-05 00:46:35,118 | INFO     | task id: 44871837
[2025-06-04 20:46:57] 2025-06-05 00:46:35,118 | INFO     | errors: (none)
[2025-06-04 20:46:57] 2025-06-05 00:46:35,118 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:46:57] 2025-06-05 00:46:35,118 | INFO     | pilot state: finished 
[2025-06-04 20:46:57] 2025-06-05 00:46:35,118 | INFO     | transexitcode: 0
[2025-06-04 20:46:57] 2025-06-05 00:46:35,118 | INFO     | exeerrorcode: 0
[2025-06-04 20:46:57] 2025-06-05 00:46:35,118 | INFO     | exeerrordiag: 
[2025-06-04 20:46:57] 2025-06-05 00:46:35,119 | INFO     | exitcode: 0
[2025-06-04 20:46:57] 2025-06-05 00:46:35,119 | INFO     | exitmsg: OK
[2025-06-04 20:46:57] 2025-06-05 00:46:35,119 | INFO     | cpuconsumptiontime: 44058 s
[2025-06-04 20:46:57] 2025-06-05 00:46:35,119 | INFO     | nevents: 400
[2025-06-04 20:46:57] 2025-06-05 00:46:35,119 | INFO     | neventsw: 0
[2025-06-04 20:46:57] 2025-06-05 00:46:35,119 | INFO     | pid: 70177
[2025-06-04 20:46:57] 2025-06-05 00:46:35,119 | INFO     | pgrp: 70177
[2025-06-04 20:46:57] 2025-06-05 00:46:35,119 | INFO     | corecount: 8
[2025-06-04 20:46:57] 2025-06-05 00:46:35,119 | INFO     | event service: False
[2025-06-04 20:46:57] 2025-06-05 00:46:35,119 | INFO     | sizes: {0: 2397392, 1: 2397420, 9: 2397626, 11: 2397654, 7513: 2424914, 7515: 2433855, 7516: 2434039, 7527: 2434209}
[2025-06-04 20:46:57] 2025-06-05 00:46:35,119 | INFO     | --------------------------------------------------
[2025-06-04 20:46:57] 2025-06-05 00:46:35,119 | INFO     | 
[2025-06-04 20:46:57] 2025-06-05 00:46:35,119 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 20:46:57] 2025-06-05 00:46:35,168 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,168 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,168 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,168 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,168 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,168 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,168 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,169 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,169 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,169 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,169 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,169 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,169 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,169 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,169 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:46:57] 2025-06-05 00:46:35,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:46:57] 2025-06-05 00:46:35,169 | INFO     | job 6667307332 has completed (purged errors)
[2025-06-04 20:46:57] 2025-06-05 00:46:35,169 | INFO     | overall cleanup function is called
[2025-06-04 20:46:57] 2025-06-05 00:46:36,177 | INFO     | --- collectZombieJob: --- 10, [70177]
[2025-06-04 20:46:57] 2025-06-05 00:46:36,178 | INFO     | zombie collector waiting for pid 70177
[2025-06-04 20:46:57] 2025-06-05 00:46:36,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:46:57] 2025-06-05 00:46:36,178 | INFO     | collected zombie processes
[2025-06-04 20:46:57] 2025-06-05 00:46:36,178 | INFO     | will attempt to kill all subprocesses of pid=70177
[2025-06-04 20:46:57] 2025-06-05 00:46:36,420 | INFO     | process IDs to be killed: [70177] (in reverse order)
[2025-06-04 20:46:57] 2025-06-05 00:46:36,505 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:46:57] 2025-06-05 00:46:36,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:46:57] 2025-06-05 00:46:36,513 | INFO     | did not find any defunct processes belonging to 70177
[2025-06-04 20:46:57] 2025-06-05 00:46:36,519 | INFO     | did not find any defunct processes belonging to 70177
[2025-06-04 20:46:57] 2025-06-05 00:46:36,519 | INFO     | ready for new job
[2025-06-04 20:46:57] 2025-06-05 00:46:36,519 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:46:57] 2025-06-05 00:46:36,521 | INFO     | **************************************
[2025-06-04 20:46:57] 2025-06-05 00:46:36,521 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:46:57] 2025-06-05 00:46:36,521 | INFO     | **************************************
[2025-06-04 20:46:57] 2025-06-05 00:46:36,521 | INFO     | 
[2025-06-04 20:46:57] 2025-06-05 00:46:36,524 | INFO     | architecture information:
[2025-06-04 20:46:57] 2025-06-05 00:46:36,524 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:46:57] 2025-06-05 00:46:36,556 | INFO     | cat /etc/os-release:
[2025-06-04 20:46:57] NAME="CentOS Linux"
[2025-06-04 20:46:57] VERSION="7 (Core)"
[2025-06-04 20:46:57] ID="centos"
[2025-06-04 20:46:57] ID_LIKE="rhel fedora"
[2025-06-04 20:46:57] VERSION_ID="7"
[2025-06-04 20:46:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:46:57] ANSI_COLOR="0;31"
[2025-06-04 20:46:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:46:57] HOME_URL="https://www.centos.org/"
[2025-06-04 20:46:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:46:57] 
[2025-06-04 20:46:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:46:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:46:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:46:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:46:57] 
[2025-06-04 20:46:57] 2025-06-05 00:46:36,556 | INFO     | **************************************
[2025-06-04 20:46:57] 2025-06-05 00:46:37,060 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 20:46:57] 2025-06-05 00:46:37,079 | INFO     | sufficient remaining disk space (106668490752 B)
[2025-06-04 20:46:57] 2025-06-05 00:46:37,079 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:46:57] 2025-06-05 00:46:37,079 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:46:57] 2025-06-05 00:46:37,079 | INFO     | update_server=False
[2025-06-04 20:46:57] 2025-06-05 00:46:37,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:46:57] 2025-06-05 00:46:37,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:46:57] 2025-06-05 00:46:37,163 | INFO     | all payload control threads have been joined
[2025-06-04 20:46:57] 2025-06-05 00:46:37,185 | INFO     | all job control threads have been joined
[2025-06-04 20:46:57] 2025-06-05 00:46:37,430 | INFO     | all data control threads have been joined
[2025-06-04 20:46:57] 2025-06-05 00:46:37,569 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 20:46:57] 2025-06-05 00:46:37,570 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 20:46:57] 2025-06-05 00:46:37,570 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:46:57] 2025-06-05 00:46:37,570 | INFO     | will abort loop
[2025-06-04 20:46:57] 2025-06-05 00:46:37,677 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:46:57] 2025-06-05 00:46:37,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:46:57] 2025-06-05 00:46:37,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:46:57] 2025-06-05 00:46:38,085 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:38,086 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:38,169 | INFO     | [payload] control thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:38,191 | INFO     | [job] control thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:38,436 | INFO     | [data] control thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:38,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:46:57] 2025-06-05 00:46:38,460 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:38,576 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:38,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:46:57] 2025-06-05 00:46:38,731 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:38,806 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:39,025 | INFO     | [job] validate thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:39,317 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:39,327 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:39,684 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:40,450 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:42,634 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:47,809 | INFO     | job.realtimelogging is not enabled
[2025-06-04 20:46:57] 2025-06-05 00:46:48,815 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:46:57] 2025-06-05 00:46:50,121 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321440347968)>', '<ExcThread(monitor, started 140320826169088)>']
[2025-06-04 20:46:57] 2025-06-05 00:46:50,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:46:57] 2025-06-05 00:46:50,754 | INFO     | [monitor] control thread has ended
[2025-06-04 20:46:57] 2025-06-05 00:46:55,147 | INFO     | all workflow threads have been joined
[2025-06-04 20:46:57] 2025-06-05 00:46:55,148 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:46:57] 2025-06-05 00:46:55,148 | INFO     | traces error code: 0
[2025-06-04 20:46:57] 2025-06-05 00:46:55,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:46:57] 2025-06-05 00:46:55,521 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:46:57] 2025-06-05 00:46:55,523 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:46:57] 2025-06-05 00:46:55,530 [wrapper] pilotpid: 63470
[2025-06-04 20:46:57] 2025-06-05 00:46:55,532 [wrapper] Pilot exit status: 0
[2025-06-04 20:46:57] 2025-06-05 00:46:55,651 [wrapper] pandaids: 6667307332
[2025-06-04 20:46:57] 2025-06-05 00:46:55,835 [wrapper] cleanup supervisor_pilot 84680 63471
[2025-06-04 20:46:57] 2025-06-05 00:46:55,850 [wrapper] Test setup, not cleaning
[2025-06-04 20:46:57] 2025-06-05 00:46:55,919 [wrapper] apfmon messages muted
[2025-06-04 20:46:57] 2025-06-05 00:46:55,956 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:46:57] 2025-06-05 00:46:55,996 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:46:57]  *** Error codes and diagnostics ***
[2025-06-04 20:46:57]     "exeErrorCode": 0,
[2025-06-04 20:46:57]     "exeErrorDiag": "",
[2025-06-04 20:46:57]     "pilotErrorCode": 0,
[2025-06-04 20:46:57]     "pilotErrorDiag": "",
[2025-06-04 20:46:57]  *** Listing of results directory ***
[2025-06-04 20:46:57] total 415508
[2025-06-04 20:46:57] -rw-r--r-- 1 boincer umatlas    495897 May 27 12:39 pilot3.tar.gz
[2025-06-04 20:46:57] -rw-r--r-- 1 boincer umatlas      5111 May 27 12:40 queuedata.json
[2025-06-04 20:46:57] -rwx------ 1 boincer umatlas     37140 May 27 12:44 runpilot2-wrapper.sh
[2025-06-04 20:46:57] -rw-r--r-- 1 boincer umatlas       100 Jun  4 18:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:46:57] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 18:40 run_atlas
[2025-06-04 20:46:57] -rw-r--r-- 1 boincer umatlas       105 Jun  4 18:40 job.xml
[2025-06-04 20:46:57] -rw-r--r-- 2 boincer umatlas 222276050 Jun  4 18:40 EVNT.44871834._002766.pool.root.1
[2025-06-04 20:46:57] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 18:40 start_atlas.sh
[2025-06-04 20:46:57] drwxrwx--x 2 boincer umatlas      4096 Jun  4 18:40 shared
[2025-06-04 20:46:57] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 18:40 input.tar.gz
[2025-06-04 20:46:57] -rw-r--r-- 1 boincer umatlas         0 Jun  4 18:40 boinc_lockfile
[2025-06-04 20:46:57] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 18:40 pandaJob.out
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas    987032 Jun  4 18:40 agis_schedconf.cvmfs.json
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas   1598969 Jun  4 18:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:46:57] drwx------ 4 boincer umatlas      4096 Jun  4 18:40 pilot3
[2025-06-04 20:46:57] -rw-r--r-- 1 boincer umatlas      6302 Jun  4 20:36 init_data.xml
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas 197282367 Jun  4 20:45 HITS.44871837._070374.pool.root.1
[2025-06-04 20:46:57] -rw-r--r-- 1 boincer umatlas       530 Jun  4 20:45 boinc_task_state.xml
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas        95 Jun  4 20:46 pilot_heartbeat.json
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas      1078 Jun  4 20:46 memory_monitor_summary.json
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas    330934 Jun  4 20:46 log.44871837._070374.job.log.tgz.1
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas      7751 Jun  4 20:46 heartbeat.json
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas      4612 Jun  4 20:46 pilotlog.txt
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas    713687 Jun  4 20:46 log.44871837._070374.job.log.1
[2025-06-04 20:46:57] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 20:46 boinc_mmap_file
[2025-06-04 20:46:57] -rw-r--r-- 1 boincer umatlas        27 Jun  4 20:46 wrapper_checkpoint.txt
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas       357 Jun  4 20:46 output.list
[2025-06-04 20:46:57] -rw-r--r-- 1 boincer umatlas       620 Jun  4 20:46 runtime_log
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas   1064960 Jun  4 20:46 result.tar.gz
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas       658 Jun  4 20:46 x8VKDmAbCe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmx6RKDmbhMkHm.diag
[2025-06-04 20:46:57] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 20:46 runtime_log.err
[2025-06-04 20:46:57] -rw-r--r-- 1 boincer umatlas     21091 Jun  4 20:46 stderr.txt
[2025-06-04 20:46:57] HITS file was successfully produced:
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas 197282367 Jun  4 20:45 shared/HITS.pool.root.1
[2025-06-04 20:46:57]  *** Contents of shared directory: ***
[2025-06-04 20:46:57] total 411292
[2025-06-04 20:46:57] -rw-r--r-- 2 boincer umatlas 222276050 Jun  4 18:40 ATLAS.root_0
[2025-06-04 20:46:57] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 18:40 start_atlas.sh
[2025-06-04 20:46:57] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 18:40 input.tar.gz
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas 197282367 Jun  4 20:45 HITS.pool.root.1
[2025-06-04 20:46:57] -rw------- 1 boincer umatlas   1064960 Jun  4 20:46 result.tar.gz
20:46:58 (59854): run_atlas exited; CPU time 43634.006744
20:46:58 (59854): called boinc_finish(0)

</stderr_txt>
]]>

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