Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:32:45 (24497): wrapper (7.7.26015): starting
06:32:45 (24497): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 06:32:45] Arguments: --nthreads 8
[2025-06-05 06:32:45] Threads: 8
[2025-06-05 06:32:45] Checking for CVMFS
[2025-06-05 06:32:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:32:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:32:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:32:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:32:47] 2.11.2.0 23942 34169 100888 146806 1 16 13404818 25165825 3520 130560 0 18924891 99.853 17977644 1871 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 06:32:47] CVMFS is ok
[2025-06-05 06:32:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:32:47] Checking for apptainer binary...
[2025-06-05 06:32:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 06:32:47] Running /usr/bin/apptainer --version
[2025-06-05 06:32:47] apptainer version 1.3.2-1.el7
[2025-06-05 06:32:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:32:58] cg-vwn380.simple-grid.lan
[2025-06-05 06:32:58] apptainer works
[2025-06-05 06:32:59] Set ATHENA_PROC_NUMBER=8
[2025-06-05 06:32:59] Set ATHENA_CORE_NUMBER=8
[2025-06-05 06:32:59] Starting ATLAS job with PandaID=6680108366
[2025-06-05 06:32:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 10:39:27]  *** The last 200 lines of the pilot log: ***
[2025-06-05 10:39:27] 2025-06-05 08:23:09,368 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 10:39:27] 2025-06-05 08:23:09,368 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 10:39:27] 2025-06-05 08:23:09,368 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 10:39:27] 2025-06-05 08:23:09,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 10:39:27] 2025-06-05 08:23:09,373 | INFO     | fitting pss+swap vs Time
[2025-06-05 10:39:27] 2025-06-05 08:23:09,374 | INFO     | sum of square deviations: 2996454322.0
[2025-06-05 10:39:27] 2025-06-05 08:23:09,376 | INFO     | sum of deviations: 74489584652.0
[2025-06-05 10:39:27] 2025-06-05 08:23:09,376 | INFO     | mean x: 1749105174.0
[2025-06-05 10:39:27] 2025-06-05 08:23:09,376 | INFO     | mean y: 2425896.784037559
[2025-06-05 10:39:27] 2025-06-05 08:23:09,376 | INFO     | -- intersect: -43479003794.078514
[2025-06-05 10:39:27] 2025-06-05 08:23:09,376 | INFO     | intersect: -43479003794.078514
[2025-06-05 10:39:27] 2025-06-05 08:23:09,377 | INFO     | chi2: 6.92801835411748
[2025-06-05 10:39:27] 2025-06-05 08:23:09,377 | INFO     | sum of square deviations: 2790348132.0
[2025-06-05 10:39:27] 2025-06-05 08:23:09,379 | INFO     | sum of deviations: 86514031104.99997
[2025-06-05 10:39:27] 2025-06-05 08:23:09,379 | INFO     | mean x: 1749105021.5
[2025-06-05 10:39:27] 2025-06-05 08:23:09,379 | INFO     | mean y: 2434594.278846154
[2025-06-05 10:39:27] 2025-06-05 08:23:09,379 | INFO     | -- intersect: -54228119830.305275
[2025-06-05 10:39:27] 2025-06-05 08:23:09,379 | INFO     | intersect: -54228119830.305275
[2025-06-05 10:39:27] 2025-06-05 08:23:09,380 | INFO     | chi2: 6.2219260926657425
[2025-06-05 10:39:27] 2025-06-05 08:23:09,380 | INFO     | current chi2=6.2219260926657425 (change=10.191835895355137 %)
[2025-06-05 10:39:27] 2025-06-05 08:23:09,380 | INFO     | right removable region: 207
[2025-06-05 10:39:27] 2025-06-05 08:23:09,380 | INFO     | sum of square deviations: 2790348132.0
[2025-06-05 10:39:27] 2025-06-05 08:23:09,382 | INFO     | sum of deviations: -153470418.50000572
[2025-06-05 10:39:27] 2025-06-05 08:23:09,382 | INFO     | mean x: 1749105326.5
[2025-06-05 10:39:27] 2025-06-05 08:23:09,382 | INFO     | mean y: 2481087.0240384615
[2025-06-05 10:39:27] 2025-06-05 08:23:09,382 | INFO     | -- intersect: 98682676.84721977
[2025-06-05 10:39:27] 2025-06-05 08:23:09,382 | INFO     | intersect: 98682676.84721977
[2025-06-05 10:39:27] 2025-06-05 08:23:09,382 | INFO     | chi2: 1.9125233748994876
[2025-06-05 10:39:27] 2025-06-05 08:23:09,383 | INFO     | current chi2=1.9125233748994876 (change=72.394366222156 %)
[2025-06-05 10:39:27] 2025-06-05 08:23:09,383 | INFO     | sum of square deviations: 2593916542.0
[2025-06-05 10:39:27] 2025-06-05 08:23:09,384 | INFO     | sum of deviations: -29979012054.000004
[2025-06-05 10:39:27] 2025-06-05 08:23:09,385 | INFO     | mean x: 1749105479.0
[2025-06-05 10:39:27] 2025-06-05 08:23:09,385 | INFO     | mean y: 2504073.975369458
[2025-06-05 10:39:27] 2025-06-05 08:23:09,385 | INFO     | -- intersect: 20217670363.87771
[2025-06-05 10:39:27] 2025-06-05 08:23:09,385 | INFO     | intersect: 20217670363.87771
[2025-06-05 10:39:27] 2025-06-05 08:23:09,385 | INFO     | chi2: 0.9353397103946496
[2025-06-05 10:39:27] 2025-06-05 08:23:09,385 | INFO     | current chi2=0.9353397103946496 (change=51.09394621418385 %)
[2025-06-05 10:39:27] 2025-06-05 08:23:09,386 | INFO     | sum of square deviations: 2406926989.5
[2025-06-05 10:39:27] 2025-06-05 08:23:09,387 | INFO     | sum of deviations: -27917631184.999996
[2025-06-05 10:39:27] 2025-06-05 08:23:09,387 | INFO     | mean x: 1749105631.5
[2025-06-05 10:39:27] 2025-06-05 08:23:09,387 | INFO     | mean y: 2502349.9191919193
[2025-06-05 10:39:27] 2025-06-05 08:23:09,387 | INFO     | -- intersect: 20290149684.817097
[2025-06-05 10:39:27] 2025-06-05 08:23:09,387 | INFO     | intersect: 20290149684.817097
[2025-06-05 10:39:27] 2025-06-05 08:23:09,388 | INFO     | chi2: 0.9226289548335146
[2025-06-05 10:39:27] 2025-06-05 08:23:09,388 | INFO     | current chi2=0.9226289548335146 (change=1.3589453564172869 %)
[2025-06-05 10:39:27] 2025-06-05 08:23:09,388 | INFO     | left removable region: 30
[2025-06-05 10:39:27] 2025-06-05 08:23:09,388 | INFO     | sum of square deviations: 1719429448.0
[2025-06-05 10:39:27] 2025-06-05 08:23:09,389 | INFO     | sum of deviations: 5973122989.000002
[2025-06-05 10:39:27] 2025-06-05 08:23:09,390 | INFO     | mean x: 1749105906.0
[2025-06-05 10:39:27] 2025-06-05 08:23:09,390 | INFO     | mean y: 2494095.0282485876
[2025-06-05 10:39:27] 2025-06-05 08:23:09,390 | INFO     | -- intersect: -6073721890.1502695
[2025-06-05 10:39:27] 2025-06-05 08:23:09,390 | INFO     | intersect: -6073721890.1502695
[2025-06-05 10:39:27] 2025-06-05 08:23:09,390 | INFO     | chi2: 0.0003738529644399715
[2025-06-05 10:39:27] 2025-06-05 08:23:09,390 | INFO     | -- intersect: -6073721890.1502695
[2025-06-05 10:39:27] 2025-06-05 08:23:09,390 | INFO     | current memory leak: 3.47 B/s (using 177 data points, chi2=0.00)
[2025-06-05 10:39:27] 2025-06-05 08:23:09,391 | INFO     | ..............................
[2025-06-05 10:39:27] 2025-06-05 08:23:09,392 | INFO     | . Timing measurements:
[2025-06-05 10:39:27] 2025-06-05 08:23:09,392 | INFO     | . get job = 0 s
[2025-06-05 10:39:27] 2025-06-05 08:23:09,392 | INFO     | . initial setup = 14 s
[2025-06-05 10:39:27] 2025-06-05 08:23:09,392 | INFO     | . payload setup = 187 s
[2025-06-05 10:39:27] 2025-06-05 08:23:09,392 | INFO     | . stage-in = 0 s
[2025-06-05 10:39:27] 2025-06-05 08:23:09,392 | INFO     | . payload execution = 13142 s
[2025-06-05 10:39:27] 2025-06-05 08:23:09,392 | INFO     | . stage-out = 4 s
[2025-06-05 10:39:27] 2025-06-05 08:23:09,392 | INFO     | . log creation = 1 s
[2025-06-05 10:39:27] 2025-06-05 08:23:09,392 | INFO     | ..............................
[2025-06-05 10:39:27] 2025-06-05 08:23:09,549 | INFO     | 
[2025-06-05 10:39:27] 2025-06-05 08:23:09,550 | INFO     | job summary report
[2025-06-05 10:39:27] 2025-06-05 08:23:09,550 | INFO     | --------------------------------------------------
[2025-06-05 10:39:27] 2025-06-05 08:23:09,550 | INFO     | PanDA job id: 6680108366
[2025-06-05 10:39:27] 2025-06-05 08:23:09,550 | INFO     | task id: 45006595
[2025-06-05 10:39:27] 2025-06-05 08:23:09,550 | INFO     | errors: (none)
[2025-06-05 10:39:27] 2025-06-05 08:23:09,550 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 10:39:27] 2025-06-05 08:23:09,550 | INFO     | pilot state: finished 
[2025-06-05 10:39:27] 2025-06-05 08:23:09,550 | INFO     | transexitcode: 0
[2025-06-05 10:39:27] 2025-06-05 08:23:09,550 | INFO     | exeerrorcode: 0
[2025-06-05 10:39:27] 2025-06-05 08:23:09,550 | INFO     | exeerrordiag: 
[2025-06-05 10:39:27] 2025-06-05 08:23:09,551 | INFO     | exitcode: 0
[2025-06-05 10:39:27] 2025-06-05 08:23:09,551 | INFO     | exitmsg: OK
[2025-06-05 10:39:27] 2025-06-05 08:23:09,551 | INFO     | cpuconsumptiontime: 48767 s
[2025-06-05 10:39:27] 2025-06-05 08:23:09,551 | INFO     | nevents: 400
[2025-06-05 10:39:27] 2025-06-05 08:23:09,551 | INFO     | neventsw: 0
[2025-06-05 10:39:27] 2025-06-05 08:23:09,551 | INFO     | pid: 9830
[2025-06-05 10:39:27] 2025-06-05 08:23:09,551 | INFO     | pgrp: 9830
[2025-06-05 10:39:27] 2025-06-05 08:23:09,551 | INFO     | corecount: 8
[2025-06-05 10:39:27] 2025-06-05 08:23:09,551 | INFO     | event service: False
[2025-06-05 10:39:27] 2025-06-05 08:23:09,551 | INFO     | sizes: {0: 2397014, 1: 2397269, 2: 2397269, 12: 2397297, 23: 2397325, 34: 2397353, 45: 2397509, 55: 2397537, 66: 2397565, 77: 2397593, 83: 2397855, 88: 2398191, 13
[2025-06-05 10:39:27] 2025-06-05 08:23:09,551 | INFO     | --------------------------------------------------
[2025-06-05 10:39:27] 2025-06-05 08:23:09,551 | INFO     | 
[2025-06-05 10:39:27] 2025-06-05 08:23:09,552 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-05 10:39:27] 2025-06-05 08:23:09,812 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,813 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,813 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,813 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,814 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 10:39:27] 2025-06-05 08:23:09,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,815 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 10:39:27] 2025-06-05 08:23:09,815 | INFO     | job 6680108366 has completed (purged errors)
[2025-06-05 10:39:27] 2025-06-05 08:23:09,815 | INFO     | overall cleanup function is called
[2025-06-05 10:39:27] 2025-06-05 08:23:10,825 | INFO     | --- collectZombieJob: --- 10, [9830]
[2025-06-05 10:39:27] 2025-06-05 08:23:10,826 | INFO     | zombie collector waiting for pid 9830
[2025-06-05 10:39:27] 2025-06-05 08:23:10,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 10:39:27] 2025-06-05 08:23:10,826 | INFO     | collected zombie processes
[2025-06-05 10:39:27] 2025-06-05 08:23:10,826 | INFO     | will attempt to kill all subprocesses of pid=9830
[2025-06-05 10:39:27] 2025-06-05 08:23:10,944 | INFO     | process IDs to be killed: [9830] (in reverse order)
[2025-06-05 10:39:27] 2025-06-05 08:23:11,725 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 10:39:27] 2025-06-05 08:23:11,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 10:39:27] 2025-06-05 08:23:11,729 | INFO     | did not find any defunct processes belonging to 9830
[2025-06-05 10:39:27] 2025-06-05 08:23:11,733 | INFO     | did not find any defunct processes belonging to 9830
[2025-06-05 10:39:27] 2025-06-05 08:23:11,733 | INFO     | ready for new job
[2025-06-05 10:39:27] 2025-06-05 08:23:11,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 10:39:27] 2025-06-05 08:23:11,736 | INFO     | **************************************
[2025-06-05 10:39:27] 2025-06-05 08:23:11,736 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 10:39:27] 2025-06-05 08:23:11,736 | INFO     | **************************************
[2025-06-05 10:39:27] 2025-06-05 08:23:11,736 | INFO     | 
[2025-06-05 10:39:27] 2025-06-05 08:23:11,737 | INFO     | pilot is running in a VM
[2025-06-05 10:39:27] 2025-06-05 08:23:11,737 | INFO     | architecture information:
[2025-06-05 10:39:27] 2025-06-05 08:23:11,738 | INFO     | executing command: cat /etc/os-release
[2025-06-05 10:39:27] 2025-06-05 08:23:12,021 | INFO     | cat /etc/os-release:
[2025-06-05 10:39:27] NAME="CentOS Linux"
[2025-06-05 10:39:27] VERSION="7 (Core)"
[2025-06-05 10:39:27] ID="centos"
[2025-06-05 10:39:27] ID_LIKE="rhel fedora"
[2025-06-05 10:39:27] VERSION_ID="7"
[2025-06-05 10:39:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 10:39:27] ANSI_COLOR="0;31"
[2025-06-05 10:39:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 10:39:27] HOME_URL="https://www.centos.org/"
[2025-06-05 10:39:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 10:39:27] 
[2025-06-05 10:39:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 10:39:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 10:39:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 10:39:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 10:39:27] 
[2025-06-05 10:39:27] 2025-06-05 08:23:12,021 | INFO     | **************************************
[2025-06-05 10:39:27] 2025-06-05 08:23:12,525 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-05 10:39:27] 2025-06-05 08:23:12,790 | INFO     | sufficient remaining disk space (496812163072 B)
[2025-06-05 10:39:27] 2025-06-05 08:23:12,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 10:39:27] 2025-06-05 08:23:12,791 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 10:39:27] 2025-06-05 08:23:12,791 | INFO     | update_server=False
[2025-06-05 10:39:27] 2025-06-05 08:23:12,791 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 10:39:27] 2025-06-05 08:23:12,792 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 10:39:27] 2025-06-05 08:23:12,793 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 10:39:27] 2025-06-05 08:23:12,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 10:39:27] 2025-06-05 08:23:12,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 10:39:27] 2025-06-05 08:23:12,794 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 10:39:27] 2025-06-05 08:23:12,797 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:39:27] 2025-06-05 08:23:12,797 | INFO     | aborting loop
[2025-06-05 10:39:27] 2025-06-05 08:23:13,151 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 10:39:27] 2025-06-05 08:23:13,502 | INFO     | all job control threads have been joined
[2025-06-05 10:39:27] 2025-06-05 08:23:13,694 | INFO     | all data control threads have been joined
[2025-06-05 10:39:27] 2025-06-05 08:23:13,797 | INFO     | [job] retrieve thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:13,802 | INFO     | [payload] validate_post thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:13,803 | INFO     | [job] job monitor thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:14,011 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:14,012 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:14,078 | INFO     | [job] validate thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:14,084 | INFO     | all payload control threads have been joined
[2025-06-05 10:39:27] 2025-06-05 08:23:14,132 | INFO     | [data] copytool_in thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:14,508 | INFO     | [job] control thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:14,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:39:27] 2025-06-05 08:23:14,623 | INFO     | [payload] failed_post thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:14,700 | INFO     | [data] control thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:15,090 | INFO     | [payload] control thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:15,106 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:15,158 | INFO     | [data] copytool_out thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:15,571 | INFO     | [job] queue monitor thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:16,803 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:23,189 | INFO     | job.realtimelogging is not enabled
[2025-06-05 10:39:27] 2025-06-05 08:23:24,195 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 10:39:27] 2025-06-05 08:23:25,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716429510464)>', '<ExcThread(monitor, started 140715459860224)>']
[2025-06-05 10:39:27] 2025-06-05 08:23:25,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 10:39:27] 2025-06-05 08:23:25,871 | INFO     | [monitor] control thread has ended
[2025-06-05 10:39:27] 2025-06-05 08:23:30,500 | INFO     | all workflow threads have been joined
[2025-06-05 10:39:27] 2025-06-05 08:23:30,500 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 10:39:27] 2025-06-05 08:23:30,501 | INFO     | traces error code: 0
[2025-06-05 10:39:27] 2025-06-05 08:23:30,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 10:39:27] 2025-06-05 08:23:30,937 [wrapper] ==== pilot stdout END ====
[2025-06-05 10:39:27] 2025-06-05 08:23:31,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 10:39:27] 2025-06-05 08:23:31,133 [wrapper] pilotpid: 31600
[2025-06-05 10:39:27] 2025-06-05 08:23:31,233 [wrapper] Pilot exit status: 0
[2025-06-05 10:39:27] 2025-06-05 08:23:31,689 [wrapper] pandaids: 6680108366
[2025-06-05 10:39:27] 2025-06-05 08:23:32,441 [wrapper] cleanup supervisor_pilot 18367 31601
[2025-06-05 10:39:27] 2025-06-05 08:23:32,542 [wrapper] Test setup, not cleaning
[2025-06-05 10:39:27] 2025-06-05 08:23:32,604 [wrapper] apfmon messages muted
[2025-06-05 10:39:27] 2025-06-05 08:23:32,682 [wrapper] ==== wrapper stdout END ====
[2025-06-05 10:39:27] 2025-06-05 08:23:32,729 [wrapper] ==== wrapper stderr END ====
[2025-06-05 10:39:27]  *** Error codes and diagnostics ***
[2025-06-05 10:39:27]     "exeErrorCode": 0,
[2025-06-05 10:39:27]     "exeErrorDiag": "",
[2025-06-05 10:39:27]     "pilotErrorCode": 0,
[2025-06-05 10:39:27]     "pilotErrorDiag": "",
[2025-06-05 10:39:27]  *** Listing of results directory ***
[2025-06-05 10:39:27] total 393920
[2025-06-05 10:39:27] -rw-r--r--. 1 boinc boinc    495897 Jun  5 00:14 pilot3.tar.gz
[2025-06-05 10:39:27] -rw-r--r--. 1 boinc boinc      5111 Jun  5 00:30 queuedata.json
[2025-06-05 10:39:27] -rwx------. 1 boinc boinc     37140 Jun  5 00:33 runpilot2-wrapper.sh
[2025-06-05 10:39:27] -rw-r--r--. 1 boinc boinc       100 Jun  5 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 10:39:27] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 06:32 run_atlas
[2025-06-05 10:39:27] -rw-r--r--. 1 boinc boinc       105 Jun  5 06:32 job.xml
[2025-06-05 10:39:27] -rw-r--r--. 1 boinc boinc      6392 Jun  5 06:32 init_data.xml
[2025-06-05 10:39:27] -rw-r--r--. 2 boinc boinc 217277989 Jun  5 06:32 EVNT.45006593._002018.pool.root.1
[2025-06-05 10:39:27] -rw-r--r--. 2 boinc boinc     15093 Jun  5 06:32 start_atlas.sh
[2025-06-05 10:39:27] drwxrwx--x. 2 boinc boinc        68 Jun  5 06:32 shared
[2025-06-05 10:39:27] -rw-r--r--. 2 boinc boinc    508886 Jun  5 06:32 input.tar.gz
[2025-06-05 10:39:27] -rw-r--r--. 1 boinc boinc         0 Jun  5 06:32 boinc_lockfile
[2025-06-05 10:39:27] -rw-r--r--. 1 boinc boinc      2524 Jun  5 06:32 pandaJob.out
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc    987109 Jun  5 06:36 agis_schedconf.cvmfs.json
[2025-06-05 10:39:27] drwx------. 4 boinc boinc      4096 Jun  5 06:36 pilot3
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc 179219861 Jun  5 10:20 HITS.45006595._056969.pool.root.1
[2025-06-05 10:39:27] -rw-r--r--. 1 boinc boinc       531 Jun  5 10:20 boinc_task_state.xml
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc      1014 Jun  5 10:21 memory_monitor_summary.json
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc   1598969 Jun  5 10:21 agis_ddmendpoints.agis.ALL.json
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc    373328 Jun  5 10:21 log.45006595._056969.job.log.tgz.1
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc        95 Jun  5 10:22 pilot_heartbeat.json
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc      7690 Jun  5 10:23 heartbeat.json
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc      4611 Jun  5 10:23 pilotlog.txt
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc   1158647 Jun  5 10:23 log.45006595._056969.job.log.1
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc       357 Jun  5 10:23 output.list
[2025-06-05 10:39:27] -rw-r--r--. 1 boinc boinc       620 Jun  5 10:23 runtime_log
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc   1546240 Jun  5 10:23 result.tar.gz
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc       657 Jun  5 10:23 Z2mNDmhqBh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDma3nKDmttOOln.diag
[2025-06-05 10:39:27] -rw-r--r--. 1 boinc boinc      8659 Jun  5 10:23 runtime_log.err
[2025-06-05 10:39:27] -rw-r--r--. 1 boinc boinc      8192 Jun  5 10:39 boinc_mmap_file
[2025-06-05 10:39:27] -rw-r--r--. 1 boinc boinc        28 Jun  5 10:39 wrapper_checkpoint.txt
[2025-06-05 10:39:27] -rw-r--r--. 1 boinc boinc     20513 Jun  5 10:39 stderr.txt
[2025-06-05 10:39:27] HITS file was successfully produced:
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc 179219861 Jun  5 10:20 shared/HITS.pool.root.1
[2025-06-05 10:39:27]  *** Contents of shared directory: ***
[2025-06-05 10:39:27] total 389236
[2025-06-05 10:39:27] -rw-r--r--. 2 boinc boinc 217277989 Jun  5 06:32 ATLAS.root_0
[2025-06-05 10:39:27] -rw-r--r--. 2 boinc boinc     15093 Jun  5 06:32 start_atlas.sh
[2025-06-05 10:39:27] -rw-r--r--. 2 boinc boinc    508886 Jun  5 06:32 input.tar.gz
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc 179219861 Jun  5 10:20 HITS.pool.root.1
[2025-06-05 10:39:27] -rw-------. 1 boinc boinc   1546240 Jun  5 10:23 result.tar.gz
10:39:29 (24497): run_atlas exited; CPU time 48942.149510
10:39:29 (24497): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN