Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:39:32 (29517): wrapper (7.7.26015): starting
10:39:32 (29517): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 10:39:32] Arguments: --nthreads 8
[2025-06-05 10:39:32] Threads: 8
[2025-06-05 10:39:32] Checking for CVMFS
[2025-06-05 10:39:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 10:39:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 10:39:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 10:39:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 10:39:35] 2.11.2.0 23942 34416 101352 146812 3 59 13491571 25165824 3519 130560 0 19046926 99.851 17986101 1868 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 10:39:35] CVMFS is ok
[2025-06-05 10:39:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:39:35] Checking for apptainer binary...
[2025-06-05 10:39:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 10:39:35] Running /usr/bin/apptainer --version
[2025-06-05 10:39:35] apptainer version 1.3.2-1.el7
[2025-06-05 10:39:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:10:10] cg-vwn380.simple-grid.lan
[2025-06-05 11:10:10] apptainer works
[2025-06-05 11:10:10] Set ATHENA_PROC_NUMBER=8
[2025-06-05 11:10:10] Set ATHENA_CORE_NUMBER=8
[2025-06-05 11:10:10] Starting ATLAS job with PandaID=6680108365
[2025-06-05 11:10:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:17:07]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:17:07] 2025-06-05 12:57:02,000 | INFO     | extracted standard info from prmon json
[2025-06-05 15:17:07] 2025-06-05 12:57:02,000 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:17:07] 2025-06-05 12:57:02,000 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:17:07] 2025-06-05 12:57:02,000 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:17:07] 2025-06-05 12:57:02,000 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:17:07] 2025-06-05 12:57:02,005 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:17:07] 2025-06-05 12:57:02,006 | INFO     | sum of square deviations: 2871616632.5
[2025-06-05 15:17:07] 2025-06-05 12:57:02,008 | INFO     | sum of deviations: 42004103795.499985
[2025-06-05 15:17:07] 2025-06-05 12:57:02,008 | INFO     | mean x: 1749121706.5
[2025-06-05 15:17:07] 2025-06-05 12:57:02,008 | INFO     | mean y: 2454539.376190476
[2025-06-05 15:17:07] 2025-06-05 12:57:02,008 | INFO     | -- intersect: -25582537858.03362
[2025-06-05 15:17:07] 2025-06-05 12:57:02,008 | INFO     | intersect: -25582537858.03362
[2025-06-05 15:17:07] 2025-06-05 12:57:02,009 | INFO     | chi2: 6.540359415965968
[2025-06-05 15:17:07] 2025-06-05 12:57:02,009 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 15:17:07] 2025-06-05 12:57:02,011 | INFO     | sum of deviations: 54971179008.99997
[2025-06-05 15:17:07] 2025-06-05 12:57:02,011 | INFO     | mean x: 1749121554.0
[2025-06-05 15:17:07] 2025-06-05 12:57:02,011 | INFO     | mean y: 2464209.697560976
[2025-06-05 15:17:07] 2025-06-05 12:57:02,011 | INFO     | -- intersect: -35991142786.53521
[2025-06-05 15:17:07] 2025-06-05 12:57:02,011 | INFO     | intersect: -35991142786.53521
[2025-06-05 15:17:07] 2025-06-05 12:57:02,011 | INFO     | chi2: 5.836133146209347
[2025-06-05 15:17:07] 2025-06-05 12:57:02,012 | INFO     | current chi2=5.836133146209347 (change=10.76739403705402 %)
[2025-06-05 15:17:07] 2025-06-05 12:57:02,012 | INFO     | right removable region: 204
[2025-06-05 15:17:07] 2025-06-05 12:57:02,012 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 15:17:07] 2025-06-05 12:57:02,021 | INFO     | sum of deviations: -29926437557.000008
[2025-06-05 15:17:07] 2025-06-05 12:57:02,021 | INFO     | mean x: 1749121859.0
[2025-06-05 15:17:07] 2025-06-05 12:57:02,021 | INFO     | mean y: 2509249.263414634
[2025-06-05 15:17:07] 2025-06-05 12:57:02,021 | INFO     | -- intersect: 19597515932.230198
[2025-06-05 15:17:07] 2025-06-05 12:57:02,021 | INFO     | intersect: 19597515932.230198
[2025-06-05 15:17:07] 2025-06-05 12:57:02,022 | INFO     | chi2: 1.8250522845829986
[2025-06-05 15:17:07] 2025-06-05 12:57:02,022 | INFO     | current chi2=1.8250522845829986 (change=72.09553529844582 %)
[2025-06-05 15:17:07] 2025-06-05 12:57:02,022 | INFO     | sum of square deviations: 2480604650.0
[2025-06-05 15:17:07] 2025-06-05 12:57:02,024 | INFO     | sum of deviations: -55224965117.0
[2025-06-05 15:17:07] 2025-06-05 12:57:02,024 | INFO     | mean x: 1749122011.5
[2025-06-05 15:17:07] 2025-06-05 12:57:02,024 | INFO     | mean y: 2529294.06
[2025-06-05 15:17:07] 2025-06-05 12:57:02,024 | INFO     | -- intersect: 38942713523.12059
[2025-06-05 15:17:07] 2025-06-05 12:57:02,024 | INFO     | intersect: 38942713523.12059
[2025-06-05 15:17:07] 2025-06-05 12:57:02,025 | INFO     | chi2: 0.9791365119700375
[2025-06-05 15:17:07] 2025-06-05 12:57:02,025 | INFO     | current chi2=0.9791365119700375 (change=46.35022129276928 %)
[2025-06-05 15:17:07] 2025-06-05 12:57:02,025 | INFO     | sum of square deviations: 2299168690.0
[2025-06-05 15:17:07] 2025-06-05 12:57:02,027 | INFO     | sum of deviations: -51578680234.99999
[2025-06-05 15:17:07] 2025-06-05 12:57:02,027 | INFO     | mean x: 1749122164.0
[2025-06-05 15:17:07] 2025-06-05 12:57:02,027 | INFO     | mean y: 2526195.605128205
[2025-06-05 15:17:07] 2025-06-05 12:57:02,027 | INFO     | -- intersect: 39241670840.05799
[2025-06-05 15:17:07] 2025-06-05 12:57:02,027 | INFO     | intersect: 39241670840.05799
[2025-06-05 15:17:07] 2025-06-05 12:57:02,027 | INFO     | chi2: 0.9693498585941398
[2025-06-05 15:17:07] 2025-06-05 12:57:02,028 | INFO     | current chi2=0.9693498585941398 (change=0.9995187858133066 %)
[2025-06-05 15:17:07] 2025-06-05 12:57:02,028 | INFO     | left removable region: 30
[2025-06-05 15:17:07] 2025-06-05 12:57:02,028 | INFO     | sum of square deviations: 1633472487.5
[2025-06-05 15:17:07] 2025-06-05 12:57:02,029 | INFO     | sum of deviations: -18415882249.0
[2025-06-05 15:17:07] 2025-06-05 12:57:02,029 | INFO     | mean x: 1749122438.5
[2025-06-05 15:17:07] 2025-06-05 12:57:02,029 | INFO     | mean y: 2519992.425287356
[2025-06-05 15:17:07] 2025-06-05 12:57:02,030 | INFO     | -- intersect: 19722247819.490845
[2025-06-05 15:17:07] 2025-06-05 12:57:02,030 | INFO     | intersect: 19722247819.490845
[2025-06-05 15:17:07] 2025-06-05 12:57:02,030 | INFO     | chi2: 0.1314868113931546
[2025-06-05 15:17:07] 2025-06-05 12:57:02,030 | INFO     | -- intersect: 19722247819.490845
[2025-06-05 15:17:07] 2025-06-05 12:57:02,030 | INFO     | current memory leak: -11.27 B/s (using 174 data points, chi2=0.13)
[2025-06-05 15:17:07] 2025-06-05 12:57:02,038 | INFO     | ..............................
[2025-06-05 15:17:07] 2025-06-05 12:57:02,039 | INFO     | . Timing measurements:
[2025-06-05 15:17:07] 2025-06-05 12:57:02,039 | INFO     | . get job = 0 s
[2025-06-05 15:17:07] 2025-06-05 12:57:02,039 | INFO     | . initial setup = 7 s
[2025-06-05 15:17:07] 2025-06-05 12:57:02,039 | INFO     | . payload setup = 198 s
[2025-06-05 15:17:07] 2025-06-05 12:57:02,039 | INFO     | . stage-in = 0 s
[2025-06-05 15:17:07] 2025-06-05 12:57:02,039 | INFO     | . payload execution = 12945 s
[2025-06-05 15:17:07] 2025-06-05 12:57:02,039 | INFO     | . stage-out = 5 s
[2025-06-05 15:17:07] 2025-06-05 12:57:02,039 | INFO     | . log creation = 1 s
[2025-06-05 15:17:07] 2025-06-05 12:57:02,039 | INFO     | ..............................
[2025-06-05 15:17:07] 2025-06-05 12:57:02,205 | INFO     | 
[2025-06-05 15:17:07] 2025-06-05 12:57:02,205 | INFO     | job summary report
[2025-06-05 15:17:07] 2025-06-05 12:57:02,205 | INFO     | --------------------------------------------------
[2025-06-05 15:17:07] 2025-06-05 12:57:02,206 | INFO     | PanDA job id: 6680108365
[2025-06-05 15:17:07] 2025-06-05 12:57:02,206 | INFO     | task id: 45006595
[2025-06-05 15:17:07] 2025-06-05 12:57:02,206 | INFO     | errors: (none)
[2025-06-05 15:17:07] 2025-06-05 12:57:02,206 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:17:07] 2025-06-05 12:57:02,206 | INFO     | pilot state: finished 
[2025-06-05 15:17:07] 2025-06-05 12:57:02,206 | INFO     | transexitcode: 0
[2025-06-05 15:17:07] 2025-06-05 12:57:02,206 | INFO     | exeerrorcode: 0
[2025-06-05 15:17:07] 2025-06-05 12:57:02,206 | INFO     | exeerrordiag: 
[2025-06-05 15:17:07] 2025-06-05 12:57:02,206 | INFO     | exitcode: 0
[2025-06-05 15:17:07] 2025-06-05 12:57:02,206 | INFO     | exitmsg: OK
[2025-06-05 15:17:07] 2025-06-05 12:57:02,206 | INFO     | cpuconsumptiontime: 48350 s
[2025-06-05 15:17:07] 2025-06-05 12:57:02,206 | INFO     | nevents: 400
[2025-06-05 15:17:07] 2025-06-05 12:57:02,206 | INFO     | neventsw: 0
[2025-06-05 15:17:07] 2025-06-05 12:57:02,207 | INFO     | pid: 32283
[2025-06-05 15:17:07] 2025-06-05 12:57:02,207 | INFO     | pgrp: 32283
[2025-06-05 15:17:07] 2025-06-05 12:57:02,207 | INFO     | corecount: 8
[2025-06-05 15:17:07] 2025-06-05 12:57:02,207 | INFO     | event service: False
[2025-06-05 15:17:07] 2025-06-05 12:57:02,207 | INFO     | sizes: {0: 2397070, 1: 2397269, 12: 2397269, 23: 2397297, 33: 2397325, 44: 2397381, 55: 2397537, 66: 2397565, 76: 2397593, 86: 2397855, 87: 2397883, 13147: 2427411
[2025-06-05 15:17:07] 2025-06-05 12:57:02,207 | INFO     | --------------------------------------------------
[2025-06-05 15:17:07] 2025-06-05 12:57:02,207 | INFO     | 
[2025-06-05 15:17:07] 2025-06-05 12:57:02,207 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-05 15:17:07] 2025-06-05 12:57:02,620 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,621 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,621 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,621 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,621 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,622 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,622 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,622 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,622 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,622 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,622 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,622 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,622 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,622 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,622 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:17:07] 2025-06-05 12:57:02,622 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,622 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:17:07] 2025-06-05 12:57:02,623 | INFO     | job 6680108365 has completed (purged errors)
[2025-06-05 15:17:07] 2025-06-05 12:57:02,623 | INFO     | overall cleanup function is called
[2025-06-05 15:17:07] 2025-06-05 12:57:03,632 | INFO     | --- collectZombieJob: --- 10, [32283]
[2025-06-05 15:17:07] 2025-06-05 12:57:03,633 | INFO     | zombie collector waiting for pid 32283
[2025-06-05 15:17:07] 2025-06-05 12:57:03,633 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:17:07] 2025-06-05 12:57:03,633 | INFO     | collected zombie processes
[2025-06-05 15:17:07] 2025-06-05 12:57:03,633 | INFO     | will attempt to kill all subprocesses of pid=32283
[2025-06-05 15:17:07] 2025-06-05 12:57:03,783 | INFO     | process IDs to be killed: [32283] (in reverse order)
[2025-06-05 15:17:07] 2025-06-05 12:57:04,285 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:17:07] 2025-06-05 12:57:04,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:17:07] 2025-06-05 12:57:04,289 | INFO     | did not find any defunct processes belonging to 32283
[2025-06-05 15:17:07] 2025-06-05 12:57:04,293 | INFO     | did not find any defunct processes belonging to 32283
[2025-06-05 15:17:07] 2025-06-05 12:57:04,293 | INFO     | ready for new job
[2025-06-05 15:17:07] 2025-06-05 12:57:04,293 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:17:07] 2025-06-05 12:57:04,296 | INFO     | **************************************
[2025-06-05 15:17:07] 2025-06-05 12:57:04,296 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:17:07] 2025-06-05 12:57:04,296 | INFO     | **************************************
[2025-06-05 15:17:07] 2025-06-05 12:57:04,296 | INFO     | 
[2025-06-05 15:17:07] 2025-06-05 12:57:04,297 | INFO     | pilot is running in a VM
[2025-06-05 15:17:07] 2025-06-05 12:57:04,297 | INFO     | architecture information:
[2025-06-05 15:17:07] 2025-06-05 12:57:04,308 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:17:07] 2025-06-05 12:57:04,584 | INFO     | cat /etc/os-release:
[2025-06-05 15:17:07] NAME="CentOS Linux"
[2025-06-05 15:17:07] VERSION="7 (Core)"
[2025-06-05 15:17:07] ID="centos"
[2025-06-05 15:17:07] ID_LIKE="rhel fedora"
[2025-06-05 15:17:07] VERSION_ID="7"
[2025-06-05 15:17:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:17:07] ANSI_COLOR="0;31"
[2025-06-05 15:17:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:17:07] HOME_URL="https://www.centos.org/"
[2025-06-05 15:17:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:17:07] 
[2025-06-05 15:17:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:17:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:17:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:17:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:17:07] 
[2025-06-05 15:17:07] 2025-06-05 12:57:04,584 | INFO     | **************************************
[2025-06-05 15:17:07] 2025-06-05 12:57:05,088 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-05 15:17:07] 2025-06-05 12:57:05,222 | INFO     | sufficient remaining disk space (496879271936 B)
[2025-06-05 15:17:07] 2025-06-05 12:57:05,223 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:17:07] 2025-06-05 12:57:05,223 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:17:07] 2025-06-05 12:57:05,223 | INFO     | update_server=False
[2025-06-05 15:17:07] 2025-06-05 12:57:05,223 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:17:07] 2025-06-05 12:57:05,231 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 15:17:07] 2025-06-05 12:57:05,232 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:17:07] 2025-06-05 12:57:05,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:17:07] 2025-06-05 12:57:05,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:17:07] 2025-06-05 12:57:05,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:17:07] 2025-06-05 12:57:05,285 | INFO     | aborting loop
[2025-06-05 15:17:07] 2025-06-05 12:57:05,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:17:07] 2025-06-05 12:57:05,907 | INFO     | all payload control threads have been joined
[2025-06-05 15:17:07] 2025-06-05 12:57:06,229 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:06,240 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:06,272 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:06,291 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:06,296 | INFO     | all data control threads have been joined
[2025-06-05 15:17:07] 2025-06-05 12:57:06,501 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:06,865 | INFO     | all job control threads have been joined
[2025-06-05 15:17:07] 2025-06-05 12:57:06,869 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:06,913 | INFO     | [payload] control thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:07,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:17:07] 2025-06-05 12:57:07,225 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:07,302 | INFO     | [data] control thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:07,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:17:07] 2025-06-05 12:57:07,357 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:07,382 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:07,480 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:07,686 | INFO     | [job] validate thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:07,871 | INFO     | [job] control thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:08,228 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:11,336 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:17:07] 2025-06-05 12:57:11,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962790115136)>', '<ExcThread(monitor, started 139962339010304)>']
[2025-06-05 15:17:07] 2025-06-05 12:57:12,274 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:17:07] 2025-06-05 12:57:12,274 | INFO     | [monitor] control thread has ended
[2025-06-05 15:17:07] 2025-06-05 12:57:16,732 | INFO     | all workflow threads have been joined
[2025-06-05 15:17:07] 2025-06-05 12:57:16,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:17:07] 2025-06-05 12:57:16,733 | INFO     | traces error code: 0
[2025-06-05 15:17:07] 2025-06-05 12:57:16,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:17:07] 2025-06-05 12:57:17,119 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:17:07] 2025-06-05 12:57:17,191 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:17:07] 2025-06-05 12:57:17,229 [wrapper] pilotpid: 21624
[2025-06-05 15:17:07] 2025-06-05 12:57:17,347 [wrapper] Pilot exit status: 0
[2025-06-05 15:17:07] 2025-06-05 12:57:17,869 [wrapper] pandaids: 6680108365
[2025-06-05 15:17:07] 2025-06-05 12:57:18,747 [wrapper] cleanup supervisor_pilot 28382 21625
[2025-06-05 15:17:07] 2025-06-05 12:57:18,789 [wrapper] Test setup, not cleaning
[2025-06-05 15:17:07] 2025-06-05 12:57:18,918 [wrapper] apfmon messages muted
[2025-06-05 15:17:07] 2025-06-05 12:57:18,994 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:17:07] 2025-06-05 12:57:19,080 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:17:07]  *** Error codes and diagnostics ***
[2025-06-05 15:17:07]     "exeErrorCode": 0,
[2025-06-05 15:17:07]     "exeErrorDiag": "",
[2025-06-05 15:17:07]     "pilotErrorCode": 0,
[2025-06-05 15:17:07]     "pilotErrorDiag": "",
[2025-06-05 15:17:07]  *** Listing of results directory ***
[2025-06-05 15:17:07] total 387680
[2025-06-05 15:17:07] -rw-r--r--. 1 boinc boinc    495897 Jun  5 00:14 pilot3.tar.gz
[2025-06-05 15:17:07] -rw-r--r--. 1 boinc boinc      5111 Jun  5 00:30 queuedata.json
[2025-06-05 15:17:07] -rwx------. 1 boinc boinc     37140 Jun  5 00:33 runpilot2-wrapper.sh
[2025-06-05 15:17:07] -rw-r--r--. 1 boinc boinc       100 Jun  5 10:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:17:07] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 10:39 run_atlas
[2025-06-05 15:17:07] -rw-r--r--. 1 boinc boinc       105 Jun  5 10:39 job.xml
[2025-06-05 15:17:07] -rw-r--r--. 2 boinc boinc 215403382 Jun  5 10:39 EVNT.45006593._001965.pool.root.1
[2025-06-05 15:17:07] -rw-r--r--. 1 boinc boinc      6392 Jun  5 10:39 init_data.xml
[2025-06-05 15:17:07] -rw-r--r--. 2 boinc boinc     15093 Jun  5 10:39 start_atlas.sh
[2025-06-05 15:17:07] drwxrwx--x. 2 boinc boinc        68 Jun  5 10:39 shared
[2025-06-05 15:17:07] -rw-r--r--. 2 boinc boinc    508893 Jun  5 10:39 input.tar.gz
[2025-06-05 15:17:07] -rw-r--r--. 1 boinc boinc         0 Jun  5 10:39 boinc_lockfile
[2025-06-05 15:17:07] -rw-r--r--. 1 boinc boinc      2524 Jun  5 11:10 pandaJob.out
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc    983281 Jun  5 11:13 agis_schedconf.cvmfs.json
[2025-06-05 15:17:07] drwx------. 4 boinc boinc      4096 Jun  5 11:13 pilot3
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc 174708476 Jun  5 14:54 HITS.45006595._056968.pool.root.1
[2025-06-05 15:17:07] -rw-r--r--. 1 boinc boinc       531 Jun  5 14:54 boinc_task_state.xml
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc      1014 Jun  5 14:55 memory_monitor_summary.json
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc   1598969 Jun  5 14:55 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc    383248 Jun  5 14:55 log.45006595._056968.job.log.tgz.1
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc        95 Jun  5 14:56 pilot_heartbeat.json
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc      7691 Jun  5 14:57 heartbeat.json
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc      4539 Jun  5 14:57 pilotlog.txt
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc   1144373 Jun  5 14:57 log.45006595._056968.job.log.1
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc       357 Jun  5 14:57 output.list
[2025-06-05 15:17:07] -rw-r--r--. 1 boinc boinc       620 Jun  5 14:57 runtime_log
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc   1546240 Jun  5 14:57 result.tar.gz
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc       657 Jun  5 14:57 vWlNDmhqBh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZ3nKDmbxCwKm.diag
[2025-06-05 15:17:07] -rw-r--r--. 1 boinc boinc      8659 Jun  5 14:57 runtime_log.err
[2025-06-05 15:17:07] -rw-r--r--. 1 boinc boinc      8192 Jun  5 15:17 boinc_mmap_file
[2025-06-05 15:17:07] -rw-r--r--. 1 boinc boinc        28 Jun  5 15:17 wrapper_checkpoint.txt
[2025-06-05 15:17:07] -rw-r--r--. 1 boinc boinc     20503 Jun  5 15:17 stderr.txt
[2025-06-05 15:17:07] HITS file was successfully produced:
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc 174708476 Jun  5 14:54 shared/HITS.pool.root.1
[2025-06-05 15:17:07]  *** Contents of shared directory: ***
[2025-06-05 15:17:07] total 383000
[2025-06-05 15:17:07] -rw-r--r--. 2 boinc boinc 215403382 Jun  5 10:39 ATLAS.root_0
[2025-06-05 15:17:07] -rw-r--r--. 2 boinc boinc     15093 Jun  5 10:39 start_atlas.sh
[2025-06-05 15:17:07] -rw-r--r--. 2 boinc boinc    508893 Jun  5 10:39 input.tar.gz
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc 174708476 Jun  5 14:54 HITS.pool.root.1
[2025-06-05 15:17:07] -rw-------. 1 boinc boinc   1546240 Jun  5 14:57 result.tar.gz
15:17:09 (29517): run_atlas exited; CPU time 48521.491232
15:17:09 (29517): called boinc_finish(0)

</stderr_txt>
]]>

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