Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:29:23 (500774): wrapper (7.7.26015): starting
18:29:23 (500774): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:29:23] Arguments: --nthreads 8
[2025-06-04 18:29:23] Threads: 8
[2025-06-04 18:29:23] Checking for CVMFS
[2025-06-04 18:29:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:29:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:29:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:29:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:29:26] 2.12.6.0 851069 33401 459172 146797 1 324 22148558 40960001 17047 16776704 1 155723219 99.669 137260999 24206 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 18:29:26] CVMFS is ok
[2025-06-04 18:29:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:29:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:29:26] Further information can be found at the LHC@home message board.
[2025-06-04 18:29:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:29:26] Checking for apptainer binary...
[2025-06-04 18:29:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:29:26] Running /usr/bin/apptainer --version
[2025-06-04 18:29:26] apptainer version 1.4.1-1.el9
[2025-06-04 18:29:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:29:27] c7-11-11.aglt2.org
[2025-06-04 18:29:27] apptainer works
[2025-06-04 18:29:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:29:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:29:27] Starting ATLAS job with PandaID=6668442775
[2025-06-04 18:29:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:14:40]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:14:40] 2025-06-05 01:14:19,159 | INFO     | extracted standard info from prmon json
[2025-06-04 21:14:40] 2025-06-05 01:14:19,159 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:14:40] 2025-06-05 01:14:19,160 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:14:40] 2025-06-05 01:14:19,160 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:14:40] 2025-06-05 01:14:19,160 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:14:40] 2025-06-05 01:14:19,194 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:14:40] 2025-06-05 01:14:19,194 | INFO     | sum of square deviations: 1222987344.8860698
[2025-06-04 21:14:40] 2025-06-05 01:14:19,195 | INFO     | sum of deviations: -751316404.0379767
[2025-06-04 21:14:40] 2025-06-05 01:14:19,195 | INFO     | mean x: 1749081213.670886
[2025-06-04 21:14:40] 2025-06-05 01:14:19,195 | INFO     | mean y: 2179846.5569620254
[2025-06-04 21:14:40] 2025-06-05 01:14:19,195 | INFO     | -- intersect: 1076690889.7992039
[2025-06-04 21:14:40] 2025-06-05 01:14:19,196 | INFO     | intersect: 1076690889.7992039
[2025-06-04 21:14:40] 2025-06-05 01:14:19,196 | INFO     | chi2: 2.812794314885592
[2025-06-04 21:14:40] 2025-06-05 01:14:19,196 | INFO     | sum of square deviations: 1110519052.2352965
[2025-06-04 21:14:40] 2025-06-05 01:14:19,197 | INFO     | sum of deviations: 634173957.8235362
[2025-06-04 21:14:40] 2025-06-05 01:14:19,197 | INFO     | mean x: 1749081061.1764705
[2025-06-04 21:14:40] 2025-06-05 01:14:19,197 | INFO     | mean y: 2181704.22875817
[2025-06-04 21:14:40] 2025-06-05 01:14:19,197 | INFO     | -- intersect: -996650019.4483708
[2025-06-04 21:14:40] 2025-06-05 01:14:19,250 | INFO     | intersect: -996650019.4483708
[2025-06-04 21:14:40] 2025-06-05 01:14:19,251 | INFO     | chi2: 2.8132246092789255
[2025-06-04 21:14:40] 2025-06-05 01:14:19,251 | INFO     | current chi2=2.8132246092789255 (change=-0.01529775536932287 %)
[2025-06-04 21:14:40] 2025-06-05 01:14:19,251 | INFO     | right removable region: 152
[2025-06-04 21:14:40] 2025-06-05 01:14:19,251 | INFO     | sum of square deviations: 1110511975.581702
[2025-06-04 21:14:40] 2025-06-05 01:14:19,252 | INFO     | sum of deviations: -29915224125.522877
[2025-06-04 21:14:40] 2025-06-05 01:14:19,252 | INFO     | mean x: 1749081366.1699347
[2025-06-04 21:14:40] 2025-06-05 01:14:19,252 | INFO     | mean y: 2219045.7124183006
[2025-06-04 21:14:40] 2025-06-05 01:14:19,252 | INFO     | -- intersect: 47119370623.78631
[2025-06-04 21:14:40] 2025-06-05 01:14:19,252 | INFO     | intersect: 47119370623.78631
[2025-06-04 21:14:40] 2025-06-05 01:14:19,252 | INFO     | chi2: 0.6078768543453824
[2025-06-04 21:14:40] 2025-06-05 01:14:19,252 | INFO     | current chi2=0.6078768543453824 (change=78.38886223822209 %)
[2025-06-04 21:14:40] 2025-06-05 01:14:19,253 | INFO     | sum of square deviations: 1005153018.7770271
[2025-06-04 21:14:40] 2025-06-05 01:14:19,260 | INFO     | sum of deviations: -36195752102.37161
[2025-06-04 21:14:40] 2025-06-05 01:14:19,260 | INFO     | mean x: 1749081518.6689188
[2025-06-04 21:14:40] 2025-06-05 01:14:19,260 | INFO     | mean y: 2228105.114864865
[2025-06-04 21:14:40] 2025-06-05 01:14:19,261 | INFO     | -- intersect: 62986987513.79525
[2025-06-04 21:14:40] 2025-06-05 01:14:19,261 | INFO     | intersect: 62986987513.79525
[2025-06-04 21:14:40] 2025-06-05 01:14:19,261 | INFO     | chi2: 0.4355562264661418
[2025-06-04 21:14:40] 2025-06-05 01:14:19,261 | INFO     | current chi2=0.4355562264661418 (change=28.347950188827518 %)
[2025-06-04 21:14:40] 2025-06-05 01:14:19,261 | INFO     | sum of square deviations: 906678155.9720255
[2025-06-04 21:14:40] 2025-06-05 01:14:19,262 | INFO     | sum of deviations: -36169674436.503494
[2025-06-04 21:14:40] 2025-06-05 01:14:19,262 | INFO     | mean x: 1749081671.1678321
[2025-06-04 21:14:40] 2025-06-05 01:14:19,262 | INFO     | mean y: 2227921.020979021
[2025-06-04 21:14:40] 2025-06-05 01:14:19,262 | INFO     | -- intersect: 69777499545.5729
[2025-06-04 21:14:40] 2025-06-05 01:14:19,262 | INFO     | intersect: 69777499545.5729
[2025-06-04 21:14:40] 2025-06-05 01:14:19,262 | INFO     | chi2: 0.36488844719791447
[2025-06-04 21:14:40] 2025-06-05 01:14:19,262 | INFO     | current chi2=0.36488844719791447 (change=16.224720248310057 %)
[2025-06-04 21:14:40] 2025-06-05 01:14:19,263 | INFO     | left removable region: 30
[2025-06-04 21:14:40] 2025-06-05 01:14:19,263 | INFO     | sum of square deviations: 562987837.7786878
[2025-06-04 21:14:40] 2025-06-05 01:14:19,263 | INFO     | sum of deviations: -13751802466.680323
[2025-06-04 21:14:40] 2025-06-05 01:14:19,263 | INFO     | mean x: 1749081945.6967213
[2025-06-04 21:14:40] 2025-06-05 01:14:19,263 | INFO     | mean y: 2193025.549180328
[2025-06-04 21:14:40] 2025-06-05 01:14:19,263 | INFO     | -- intersect: 42726081182.99372
[2025-06-04 21:14:40] 2025-06-05 01:14:19,264 | INFO     | intersect: 42726081182.99372
[2025-06-04 21:14:40] 2025-06-05 01:14:19,264 | INFO     | chi2: 0.24418690521897335
[2025-06-04 21:14:40] 2025-06-05 01:14:19,264 | INFO     | -- intersect: 42726081182.99372
[2025-06-04 21:14:40] 2025-06-05 01:14:19,264 | INFO     | current memory leak: -24.43 B/s (using 122 data points, chi2=0.24)
[2025-06-04 21:14:40] 2025-06-05 01:14:19,264 | INFO     | ..............................
[2025-06-04 21:14:40] 2025-06-05 01:14:19,264 | INFO     | . Timing measurements:
[2025-06-04 21:14:40] 2025-06-05 01:14:19,265 | INFO     | . get job = 0 s
[2025-06-04 21:14:40] 2025-06-05 01:14:19,265 | INFO     | . initial setup = 9 s
[2025-06-04 21:14:40] 2025-06-05 01:14:19,265 | INFO     | . payload setup = 61 s
[2025-06-04 21:14:40] 2025-06-05 01:14:19,265 | INFO     | . stage-in = 0 s
[2025-06-04 21:14:40] 2025-06-05 01:14:19,265 | INFO     | . payload execution = 9643 s
[2025-06-04 21:14:40] 2025-06-05 01:14:19,265 | INFO     | . stage-out = 1 s
[2025-06-04 21:14:40] 2025-06-05 01:14:19,265 | INFO     | . log creation = 0 s
[2025-06-04 21:14:40] 2025-06-05 01:14:19,265 | INFO     | ..............................
[2025-06-04 21:14:40] 2025-06-05 01:14:19,596 | INFO     | 
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | job summary report
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | --------------------------------------------------
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | PanDA job id: 6668442775
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | task id: 44871837
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | errors: (none)
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | pilot state: finished 
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | transexitcode: 0
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | exeerrorcode: 0
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | exeerrordiag: 
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | exitcode: 0
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | exitmsg: OK
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | cpuconsumptiontime: 41747 s
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | nevents: 400
[2025-06-04 21:14:40] 2025-06-05 01:14:19,597 | INFO     | neventsw: 0
[2025-06-04 21:14:40] 2025-06-05 01:14:19,598 | INFO     | pid: 524319
[2025-06-04 21:14:40] 2025-06-05 01:14:19,598 | INFO     | pgrp: 524319
[2025-06-04 21:14:40] 2025-06-05 01:14:19,598 | INFO     | corecount: 8
[2025-06-04 21:14:40] 2025-06-05 01:14:19,598 | INFO     | event service: False
[2025-06-04 21:14:40] 2025-06-05 01:14:19,598 | INFO     | sizes: {0: 2397165, 1: 2397306, 2: 2397448, 12: 2397448, 23: 2397476, 34: 2397504, 36: 2397866, 45: 2397894, 9708: 2426235, 9711: 2435176, 9714: 2435232, 9729: 243
[2025-06-04 21:14:40] 2025-06-05 01:14:19,598 | INFO     | --------------------------------------------------
[2025-06-04 21:14:40] 2025-06-05 01:14:19,598 | INFO     | 
[2025-06-04 21:14:40] 2025-06-05 01:14:19,598 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 21:14:40] 2025-06-05 01:14:19,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,629 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,629 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:14:40] 2025-06-05 01:14:19,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:14:40] 2025-06-05 01:14:19,630 | INFO     | job 6668442775 has completed (purged errors)
[2025-06-04 21:14:40] 2025-06-05 01:14:19,630 | INFO     | overall cleanup function is called
[2025-06-04 21:14:40] 2025-06-05 01:14:20,639 | INFO     | --- collectZombieJob: --- 10, [524319]
[2025-06-04 21:14:40] 2025-06-05 01:14:20,639 | INFO     | zombie collector waiting for pid 524319
[2025-06-04 21:14:40] 2025-06-05 01:14:20,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:14:40] 2025-06-05 01:14:20,640 | INFO     | collected zombie processes
[2025-06-04 21:14:40] 2025-06-05 01:14:20,640 | INFO     | will attempt to kill all subprocesses of pid=524319
[2025-06-04 21:14:40] 2025-06-05 01:14:22,124 | INFO     | process IDs to be killed: [524319] (in reverse order)
[2025-06-04 21:14:40] 2025-06-05 01:14:22,507 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:14:40] 2025-06-05 01:14:22,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:14:40] 2025-06-05 01:14:22,594 | INFO     | did not find any defunct processes belonging to 524319
[2025-06-04 21:14:40] 2025-06-05 01:14:22,716 | INFO     | did not find any defunct processes belonging to 524319
[2025-06-04 21:14:40] 2025-06-05 01:14:22,716 | INFO     | ready for new job
[2025-06-04 21:14:40] 2025-06-05 01:14:22,716 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:14:40] 2025-06-05 01:14:22,733 | INFO     | **************************************
[2025-06-04 21:14:40] 2025-06-05 01:14:22,733 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:14:40] 2025-06-05 01:14:22,733 | INFO     | **************************************
[2025-06-04 21:14:40] 2025-06-05 01:14:22,733 | INFO     | 
[2025-06-04 21:14:40] 2025-06-05 01:14:22,777 | INFO     | architecture information:
[2025-06-04 21:14:40] 2025-06-05 01:14:22,800 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:14:40] 2025-06-05 01:14:22,848 | INFO     | cat /etc/os-release:
[2025-06-04 21:14:40] NAME="CentOS Linux"
[2025-06-04 21:14:40] VERSION="7 (Core)"
[2025-06-04 21:14:40] ID="centos"
[2025-06-04 21:14:40] ID_LIKE="rhel fedora"
[2025-06-04 21:14:40] VERSION_ID="7"
[2025-06-04 21:14:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:14:40] ANSI_COLOR="0;31"
[2025-06-04 21:14:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:14:40] HOME_URL="https://www.centos.org/"
[2025-06-04 21:14:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:14:40] 
[2025-06-04 21:14:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:14:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:14:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:14:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:14:40] 
[2025-06-04 21:14:40] 2025-06-05 01:14:22,848 | INFO     | **************************************
[2025-06-04 21:14:40] 2025-06-05 01:14:23,352 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 21:14:40] 2025-06-05 01:14:23,419 | INFO     | sufficient remaining disk space (85899345920 B)
[2025-06-04 21:14:40] 2025-06-05 01:14:23,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:14:40] 2025-06-05 01:14:23,420 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:14:40] 2025-06-05 01:14:23,420 | INFO     | update_server=False
[2025-06-04 21:14:40] 2025-06-05 01:14:23,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:14:40] 2025-06-05 01:14:23,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:14:40] 2025-06-05 01:14:23,430 | INFO     | aborting loop
[2025-06-04 21:14:40] 2025-06-05 01:14:23,430 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:14:40] 2025-06-05 01:14:23,430 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:14:40] 2025-06-05 01:14:23,430 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:14:40] 2025-06-05 01:14:23,430 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:14:40] 2025-06-05 01:14:23,480 | INFO     | all data control threads have been joined
[2025-06-04 21:14:40] 2025-06-05 01:14:23,605 | INFO     | all payload control threads have been joined
[2025-06-04 21:14:40] 2025-06-05 01:14:23,823 | INFO     | all job control threads have been joined
[2025-06-04 21:14:40] 2025-06-05 01:14:24,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:14:40] 2025-06-05 01:14:24,434 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:24,435 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:24,486 | INFO     | [data] control thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:24,499 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:24,611 | INFO     | [payload] control thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:24,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:14:40] 2025-06-05 01:14:24,705 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:24,782 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:24,783 | INFO     | [job] validate thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:24,805 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:24,832 | INFO     | [job] control thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:24,893 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:14:40] 2025-06-05 01:14:25,475 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:25,617 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:25,851 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:26,900 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:28,296 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:33,697 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:14:40] 2025-06-05 01:14:34,704 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:14:40] 2025-06-05 01:14:34,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196977329984)>', '<ExcThread(monitor, started 140196121147136)>']
[2025-06-04 21:14:40] 2025-06-05 01:14:35,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:14:40] 2025-06-05 01:14:35,502 | INFO     | [monitor] control thread has ended
[2025-06-04 21:14:40] 2025-06-05 01:14:39,875 | INFO     | all workflow threads have been joined
[2025-06-04 21:14:40] 2025-06-05 01:14:39,875 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:14:40] 2025-06-05 01:14:39,876 | INFO     | traces error code: 0
[2025-06-04 21:14:40] 2025-06-05 01:14:39,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:14:40] 2025-06-05 01:14:40,463 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:14:40] 2025-06-05 01:14:40,465 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:14:40] 2025-06-05 01:14:40,467 [wrapper] pilotpid: 510277
[2025-06-04 21:14:40] 2025-06-05 01:14:40,469 [wrapper] Pilot exit status: 0
[2025-06-04 21:14:40] 2025-06-05 01:14:40,482 [wrapper] pandaids: 6668442775
[2025-06-04 21:14:40] 2025-06-05 01:14:40,552 [wrapper] cleanup supervisor_pilot 1000596 510278
[2025-06-04 21:14:40] 2025-06-05 01:14:40,554 [wrapper] Test setup, not cleaning
[2025-06-04 21:14:40] 2025-06-05 01:14:40,556 [wrapper] apfmon messages muted
[2025-06-04 21:14:40] 2025-06-05 01:14:40,558 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:14:40] 2025-06-05 01:14:40,561 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:14:40]  *** Error codes and diagnostics ***
[2025-06-04 21:14:40]     "exeErrorCode": 0,
[2025-06-04 21:14:40]     "exeErrorDiag": "",
[2025-06-04 21:14:40]     "pilotErrorCode": 0,
[2025-06-04 21:14:40]     "pilotErrorDiag": "",
[2025-06-04 21:14:40]  *** Listing of results directory ***
[2025-06-04 21:14:40] total 418448
[2025-06-04 21:14:40] -rw-r--r--. 1 boincer umatlas    495897 May 28 09:01 pilot3.tar.gz
[2025-06-04 21:14:40] -rw-r--r--. 1 boincer umatlas      5111 May 28 09:07 queuedata.json
[2025-06-04 21:14:40] -rwx------. 1 boincer umatlas     37140 May 28 09:08 runpilot2-wrapper.sh
[2025-06-04 21:14:40] -rw-r--r--. 1 boincer umatlas       100 Jun  4 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:14:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 18:29 run_atlas
[2025-06-04 21:14:40] -rw-r--r--. 1 boincer umatlas       105 Jun  4 18:29 job.xml
[2025-06-04 21:14:40] -rw-r--r--. 2 boincer umatlas 224371493 Jun  4 18:29 EVNT.44871834._003305.pool.root.1
[2025-06-04 21:14:40] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 18:29 shared
[2025-06-04 21:14:40] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 18:29 input.tar.gz
[2025-06-04 21:14:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 18:29 start_atlas.sh
[2025-06-04 21:14:40] -rw-r--r--. 1 boincer umatlas         0 Jun  4 18:29 boinc_lockfile
[2025-06-04 21:14:40] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 18:29 pandaJob.out
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas    987032 Jun  4 18:30 agis_schedconf.cvmfs.json
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas   1598969 Jun  4 18:30 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:14:40] drwx------. 4 boincer umatlas      4096 Jun  4 18:30 pilot3
[2025-06-04 21:14:40] -rw-r--r--. 1 boincer umatlas      6897 Jun  4 21:11 init_data.xml
[2025-06-04 21:14:40] -rw-r--r--. 1 boincer umatlas       530 Jun  4 21:13 boinc_task_state.xml
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas 197912892 Jun  4 21:13 HITS.44871837._084697.pool.root.1
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas        95 Jun  4 21:13 pilot_heartbeat.json
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas      1029 Jun  4 21:13 memory_monitor_summary.json
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas    343504 Jun  4 21:14 log.44871837._084697.job.log.tgz.1
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas      7688 Jun  4 21:14 heartbeat.json
[2025-06-04 21:14:40] -rw-r--r--. 1 boincer umatlas        27 Jun  4 21:14 wrapper_checkpoint.txt
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas      4548 Jun  4 21:14 pilotlog.txt
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas    844950 Jun  4 21:14 log.44871837._084697.job.log.1
[2025-06-04 21:14:40] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 21:14 boinc_mmap_file
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas       357 Jun  4 21:14 output.list
[2025-06-04 21:14:40] -rw-r--r--. 1 boincer umatlas       620 Jun  4 21:14 runtime_log
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas   1208320 Jun  4 21:14 result.tar.gz
[2025-06-04 21:14:40] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 21:14 runtime_log.err
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas       653 Jun  4 21:14 ppMMDmqhVe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0WTKDmFEY0em.diag
[2025-06-04 21:14:40] -rw-r--r--. 1 boincer umatlas     20915 Jun  4 21:14 stderr.txt
[2025-06-04 21:14:40] HITS file was successfully produced:
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas 197912892 Jun  4 21:13 shared/HITS.pool.root.1
[2025-06-04 21:14:40]  *** Contents of shared directory: ***
[2025-06-04 21:14:40] total 414092
[2025-06-04 21:14:40] -rw-r--r--. 2 boincer umatlas 224371493 Jun  4 18:29 ATLAS.root_0
[2025-06-04 21:14:40] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 18:29 input.tar.gz
[2025-06-04 21:14:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 18:29 start_atlas.sh
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas 197912892 Jun  4 21:13 HITS.pool.root.1
[2025-06-04 21:14:40] -rw-------. 1 boincer umatlas   1208320 Jun  4 21:14 result.tar.gz
21:14:42 (500774): run_atlas exited; CPU time 41785.863158
21:14:42 (500774): called boinc_finish(0)

</stderr_txt>
]]>

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