Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:27:08 (25645): wrapper (7.7.26015): starting
01:27:08 (25645): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 01:27:08] Arguments: --nthreads 8
[2025-06-05 01:27:08] Threads: 8
[2025-06-05 01:27:08] Checking for CVMFS
[2025-06-05 01:27:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:27:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:27:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:27:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:27:09] 2.11.2.0 11156 33882 90568 146798 0 59 15744472 25165825 3519 130560 0 16939073 99.746 21383355 2120 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 01:27:09] CVMFS is ok
[2025-06-05 01:27:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:27:09] Checking for apptainer binary...
[2025-06-05 01:27:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:27:09] Running /usr/bin/apptainer --version
[2025-06-05 01:27:09] apptainer version 1.3.2-1.el7
[2025-06-05 01:27:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:27:17] cg-vwn264.simple-grid.lan
[2025-06-05 01:27:17] apptainer works
[2025-06-05 01:27:17] Set ATHENA_PROC_NUMBER=8
[2025-06-05 01:27:17] Set ATHENA_CORE_NUMBER=8
[2025-06-05 01:27:17] Starting ATLAS job with PandaID=6668191797
[2025-06-05 01:27:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:29:32]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:29:32] 2025-06-05 05:11:05,277 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 07:29:32] 2025-06-05 05:11:05,277 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:29:32] 2025-06-05 05:11:05,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:29:32] 2025-06-05 05:11:05,284 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:29:32] 2025-06-05 05:11:05,285 | INFO     | sum of square deviations: 10743038637.5
[2025-06-05 07:29:32] 2025-06-05 05:11:05,288 | INFO     | sum of deviations: 86742264953.49997
[2025-06-05 07:29:32] 2025-06-05 05:11:05,289 | INFO     | mean x: 1749090240.5
[2025-06-05 07:29:32] 2025-06-05 05:11:05,289 | INFO     | mean y: 2471799.13803681
[2025-06-05 07:29:32] 2025-06-05 05:11:05,289 | INFO     | -- intersect: -14120166514.702988
[2025-06-05 07:29:32] 2025-06-05 05:11:05,289 | INFO     | intersect: -14120166514.702988
[2025-06-05 07:29:32] 2025-06-05 05:11:05,290 | INFO     | chi2: 6.115308171306025
[2025-06-05 07:29:32] 2025-06-05 05:11:05,290 | INFO     | sum of square deviations: 10256266720.0
[2025-06-05 07:29:32] 2025-06-05 05:11:05,313 | INFO     | sum of deviations: 106633780238.00002
[2025-06-05 07:29:32] 2025-06-05 05:11:05,313 | INFO     | mean x: 1749090088.0
[2025-06-05 07:29:32] 2025-06-05 05:11:05,313 | INFO     | mean y: 2477946.785046729
[2025-06-05 07:29:32] 2025-06-05 05:11:05,313 | INFO     | -- intersect: -18182705137.09015
[2025-06-05 07:29:32] 2025-06-05 05:11:05,313 | INFO     | intersect: -18182705137.09015
[2025-06-05 07:29:32] 2025-06-05 05:11:05,314 | INFO     | chi2: 5.380509631223034
[2025-06-05 07:29:32] 2025-06-05 05:11:05,314 | INFO     | current chi2=5.380509631223034 (change=12.015723811447149 %)
[2025-06-05 07:29:32] 2025-06-05 05:11:05,314 | INFO     | right removable region: 320
[2025-06-05 07:29:32] 2025-06-05 05:11:05,315 | INFO     | sum of square deviations: 10256266720.0
[2025-06-05 07:29:32] 2025-06-05 05:11:05,318 | INFO     | sum of deviations: -23806566441.000004
[2025-06-05 07:29:32] 2025-06-05 05:11:05,318 | INFO     | mean x: 1749090393.0
[2025-06-05 07:29:32] 2025-06-05 05:11:05,318 | INFO     | mean y: 2506398.9750778815
[2025-06-05 07:29:32] 2025-06-05 05:11:05,318 | INFO     | -- intersect: 4062447290.632126
[2025-06-05 07:29:32] 2025-06-05 05:11:05,318 | INFO     | intersect: 4062447290.632126
[2025-06-05 07:29:32] 2025-06-05 05:11:05,319 | INFO     | chi2: 1.7219121237148471
[2025-06-05 07:29:32] 2025-06-05 05:11:05,319 | INFO     | current chi2=1.7219121237148471 (change=71.84259442893939 %)
[2025-06-05 07:29:32] 2025-06-05 05:11:05,319 | INFO     | sum of square deviations: 9784425315.0
[2025-06-05 07:29:32] 2025-06-05 05:11:05,322 | INFO     | sum of deviations: -60953282174.0
[2025-06-05 07:29:32] 2025-06-05 05:11:05,323 | INFO     | mean x: 1749090545.5
[2025-06-05 07:29:32] 2025-06-05 05:11:05,323 | INFO     | mean y: 2518329.8037974685
[2025-06-05 07:29:32] 2025-06-05 05:11:05,323 | INFO     | -- intersect: 10898693233.841795
[2025-06-05 07:29:32] 2025-06-05 05:11:05,323 | INFO     | intersect: 10898693233.841795
[2025-06-05 07:29:32] 2025-06-05 05:11:05,324 | INFO     | chi2: 0.9854600514680667
[2025-06-05 07:29:32] 2025-06-05 05:11:05,324 | INFO     | current chi2=0.9854600514680667 (change=42.76943417170217 %)
[2025-06-05 07:29:32] 2025-06-05 05:11:05,324 | INFO     | sum of square deviations: 9327281860.0
[2025-06-05 07:29:32] 2025-06-05 05:11:05,328 | INFO     | sum of deviations: -55759670865.0
[2025-06-05 07:29:32] 2025-06-05 05:11:05,328 | INFO     | mean x: 1749090698.0
[2025-06-05 07:29:32] 2025-06-05 05:11:05,328 | INFO     | mean y: 2516582.7556270096
[2025-06-05 07:29:32] 2025-06-05 05:11:05,329 | INFO     | -- intersect: 10458802036.266422
[2025-06-05 07:29:32] 2025-06-05 05:11:05,329 | INFO     | intersect: 10458802036.266422
[2025-06-05 07:29:32] 2025-06-05 05:11:05,329 | INFO     | chi2: 0.9729759459991538
[2025-06-05 07:29:32] 2025-06-05 05:11:05,329 | INFO     | current chi2=0.9729759459991538 (change=1.2668301926917245 %)
[2025-06-05 07:29:32] 2025-06-05 05:11:05,329 | INFO     | left removable region: 30
[2025-06-05 07:29:32] 2025-06-05 05:11:05,330 | INFO     | sum of square deviations: 7562532492.5
[2025-06-05 07:29:32] 2025-06-05 05:11:05,333 | INFO     | sum of deviations: -3131964144.499999
[2025-06-05 07:29:32] 2025-06-05 05:11:05,333 | INFO     | mean x: 1749090972.5
[2025-06-05 07:29:32] 2025-06-05 05:11:05,333 | INFO     | mean y: 2512098.9275862067
[2025-06-05 07:29:32] 2025-06-05 05:11:05,333 | INFO     | -- intersect: 726884551.7760767
[2025-06-05 07:29:32] 2025-06-05 05:11:05,333 | INFO     | intersect: 726884551.7760767
[2025-06-05 07:29:32] 2025-06-05 05:11:05,334 | INFO     | chi2: 0.08582178937567192
[2025-06-05 07:29:32] 2025-06-05 05:11:05,334 | INFO     | -- intersect: 726884551.7760767
[2025-06-05 07:29:32] 2025-06-05 05:11:05,334 | INFO     | current memory leak: -0.41 B/s (using 290 data points, chi2=0.09)
[2025-06-05 07:29:32] 2025-06-05 05:11:05,335 | INFO     | ..............................
[2025-06-05 07:29:32] 2025-06-05 05:11:05,336 | INFO     | . Timing measurements:
[2025-06-05 07:29:32] 2025-06-05 05:11:05,336 | INFO     | . get job = 0 s
[2025-06-05 07:29:32] 2025-06-05 05:11:05,336 | INFO     | . initial setup = 8 s
[2025-06-05 07:29:32] 2025-06-05 05:11:05,336 | INFO     | . payload setup = 155 s
[2025-06-05 07:29:32] 2025-06-05 05:11:05,336 | INFO     | . stage-in = 0 s
[2025-06-05 07:29:32] 2025-06-05 05:11:05,336 | INFO     | . payload execution = 19995 s
[2025-06-05 07:29:32] 2025-06-05 05:11:05,336 | INFO     | . stage-out = 4 s
[2025-06-05 07:29:32] 2025-06-05 05:11:05,336 | INFO     | . log creation = 1 s
[2025-06-05 07:29:32] 2025-06-05 05:11:05,336 | INFO     | ..............................
[2025-06-05 07:29:32] 2025-06-05 05:11:05,806 | INFO     | 
[2025-06-05 07:29:32] 2025-06-05 05:11:05,807 | INFO     | job summary report
[2025-06-05 07:29:32] 2025-06-05 05:11:05,807 | INFO     | --------------------------------------------------
[2025-06-05 07:29:32] 2025-06-05 05:11:05,807 | INFO     | PanDA job id: 6668191797
[2025-06-05 07:29:32] 2025-06-05 05:11:05,807 | INFO     | task id: 44871837
[2025-06-05 07:29:32] 2025-06-05 05:11:05,807 | INFO     | errors: (none)
[2025-06-05 07:29:32] 2025-06-05 05:11:05,807 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:29:32] 2025-06-05 05:11:05,807 | INFO     | pilot state: finished 
[2025-06-05 07:29:32] 2025-06-05 05:11:05,807 | INFO     | transexitcode: 0
[2025-06-05 07:29:32] 2025-06-05 05:11:05,807 | INFO     | exeerrorcode: 0
[2025-06-05 07:29:32] 2025-06-05 05:11:05,807 | INFO     | exeerrordiag: 
[2025-06-05 07:29:32] 2025-06-05 05:11:05,808 | INFO     | exitcode: 0
[2025-06-05 07:29:32] 2025-06-05 05:11:05,808 | INFO     | exitmsg: OK
[2025-06-05 07:29:32] 2025-06-05 05:11:05,808 | INFO     | cpuconsumptiontime: 75450 s
[2025-06-05 07:29:32] 2025-06-05 05:11:05,808 | INFO     | nevents: 400
[2025-06-05 07:29:32] 2025-06-05 05:11:05,808 | INFO     | neventsw: 0
[2025-06-05 07:29:32] 2025-06-05 05:11:05,808 | INFO     | pid: 5548
[2025-06-05 07:29:32] 2025-06-05 05:11:05,808 | INFO     | pgrp: 5548
[2025-06-05 07:29:32] 2025-06-05 05:11:05,808 | INFO     | corecount: 8
[2025-06-05 07:29:32] 2025-06-05 05:11:05,808 | INFO     | event service: False
[2025-06-05 07:29:32] 2025-06-05 05:11:05,808 | INFO     | sizes: {0: 2396563, 1: 2397249, 2: 2397448, 13: 2397448, 23: 2397504, 34: 2397532, 45: 2397688, 56: 2397716, 66: 2397744, 77: 2397772, 88: 2397828, 90: 2398342, 99
[2025-06-05 07:29:32] 2025-06-05 05:11:05,808 | INFO     | --------------------------------------------------
[2025-06-05 07:29:32] 2025-06-05 05:11:05,808 | INFO     | 
[2025-06-05 07:29:32] 2025-06-05 05:11:05,809 | INFO     | executing command: ls -lF /var/lib/boinc/slots/27
[2025-06-05 07:29:32] 2025-06-05 05:11:06,221 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,221 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,221 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,222 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,222 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,223 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:29:32] 2025-06-05 05:11:06,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,223 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:29:32] 2025-06-05 05:11:06,223 | INFO     | job 6668191797 has completed (purged errors)
[2025-06-05 07:29:32] 2025-06-05 05:11:06,223 | INFO     | overall cleanup function is called
[2025-06-05 07:29:32] 2025-06-05 05:11:07,232 | INFO     | --- collectZombieJob: --- 10, [5548]
[2025-06-05 07:29:32] 2025-06-05 05:11:07,233 | INFO     | zombie collector waiting for pid 5548
[2025-06-05 07:29:32] 2025-06-05 05:11:07,233 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:29:32] 2025-06-05 05:11:07,233 | INFO     | collected zombie processes
[2025-06-05 07:29:32] 2025-06-05 05:11:07,233 | INFO     | will attempt to kill all subprocesses of pid=5548
[2025-06-05 07:29:32] 2025-06-05 05:11:07,355 | INFO     | process IDs to be killed: [5548] (in reverse order)
[2025-06-05 07:29:32] 2025-06-05 05:11:08,299 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:29:32] 2025-06-05 05:11:08,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:29:32] 2025-06-05 05:11:08,303 | INFO     | did not find any defunct processes belonging to 5548
[2025-06-05 07:29:32] 2025-06-05 05:11:08,307 | INFO     | did not find any defunct processes belonging to 5548
[2025-06-05 07:29:32] 2025-06-05 05:11:08,307 | INFO     | ready for new job
[2025-06-05 07:29:32] 2025-06-05 05:11:08,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:29:32] 2025-06-05 05:11:08,310 | INFO     | **************************************
[2025-06-05 07:29:32] 2025-06-05 05:11:08,310 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:29:32] 2025-06-05 05:11:08,310 | INFO     | **************************************
[2025-06-05 07:29:32] 2025-06-05 05:11:08,310 | INFO     | 
[2025-06-05 07:29:32] 2025-06-05 05:11:08,311 | INFO     | pilot is running in a VM
[2025-06-05 07:29:32] 2025-06-05 05:11:08,311 | INFO     | architecture information:
[2025-06-05 07:29:32] 2025-06-05 05:11:08,324 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:29:32] 2025-06-05 05:11:08,634 | INFO     | cat /etc/os-release:
[2025-06-05 07:29:32] NAME="CentOS Linux"
[2025-06-05 07:29:32] VERSION="7 (Core)"
[2025-06-05 07:29:32] ID="centos"
[2025-06-05 07:29:32] ID_LIKE="rhel fedora"
[2025-06-05 07:29:32] VERSION_ID="7"
[2025-06-05 07:29:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:29:32] ANSI_COLOR="0;31"
[2025-06-05 07:29:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:29:32] HOME_URL="https://www.centos.org/"
[2025-06-05 07:29:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:29:32] 
[2025-06-05 07:29:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:29:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:29:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:29:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:29:32] 
[2025-06-05 07:29:32] 2025-06-05 05:11:08,634 | INFO     | **************************************
[2025-06-05 07:29:32] 2025-06-05 05:11:08,774 | INFO     | PID=31341 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 07:29:32] 2025-06-05 05:11:08,775 | INFO     | .. there are 9 such processes running
[2025-06-05 07:29:32] 2025-06-05 05:11:09,137 | INFO     | executing command: df -mP /var/lib/boinc/slots/27
[2025-06-05 07:29:32] 2025-06-05 05:11:09,387 | INFO     | sufficient remaining disk space (496786997248 B)
[2025-06-05 07:29:32] 2025-06-05 05:11:09,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:29:32] 2025-06-05 05:11:09,388 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:29:32] 2025-06-05 05:11:09,388 | INFO     | update_server=False
[2025-06-05 07:29:32] 2025-06-05 05:11:09,388 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:29:32] 2025-06-05 05:11:09,389 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 07:29:32] 2025-06-05 05:11:09,390 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:29:32] 2025-06-05 05:11:09,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:29:32] 2025-06-05 05:11:09,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:29:32] 2025-06-05 05:11:09,694 | INFO     | all job control threads have been joined
[2025-06-05 07:29:32] 2025-06-05 05:11:09,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:29:32] 2025-06-05 05:11:09,809 | INFO     | aborting loop
[2025-06-05 07:29:32] 2025-06-05 05:11:09,847 | INFO     | all payload control threads have been joined
[2025-06-05 07:29:32] 2025-06-05 05:11:09,882 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:29:32] 2025-06-05 05:11:10,308 | INFO     | all data control threads have been joined
[2025-06-05 07:29:32] 2025-06-05 05:11:10,394 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:10,481 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:29:32] 2025-06-05 05:11:10,507 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:10,701 | INFO     | [job] control thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:10,776 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:10,816 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:10,854 | INFO     | [payload] control thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:10,979 | INFO     | [job] validate thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:11,098 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:11,141 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:11,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:29:32] 2025-06-05 05:11:11,314 | INFO     | [data] control thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:11,420 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:11,487 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:11,501 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:11,875 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:11,889 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:15,295 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:29:32] 2025-06-05 05:11:16,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140158209447744)>', '<ExcThread(monitor, started 140157768414976)>']
[2025-06-05 07:29:32] 2025-06-05 05:11:16,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:29:32] 2025-06-05 05:11:16,433 | INFO     | [monitor] control thread has ended
[2025-06-05 07:29:32] 2025-06-05 05:11:21,039 | INFO     | all workflow threads have been joined
[2025-06-05 07:29:32] 2025-06-05 05:11:21,040 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:29:32] 2025-06-05 05:11:21,040 | INFO     | traces error code: 0
[2025-06-05 07:29:32] 2025-06-05 05:11:21,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:29:32] 2025-06-05 05:11:21,487 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:29:32] 2025-06-05 05:11:21,590 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:29:32] 2025-06-05 05:11:21,642 [wrapper] pilotpid: 31341
[2025-06-05 07:29:32] 2025-06-05 05:11:21,709 [wrapper] Pilot exit status: 0
[2025-06-05 07:29:32] 2025-06-05 05:11:22,175 [wrapper] pandaids: 6668191797
[2025-06-05 07:29:32] 2025-06-05 05:11:23,124 [wrapper] cleanup supervisor_pilot 32053 31342
[2025-06-05 07:29:32] 2025-06-05 05:11:23,146 [wrapper] Test setup, not cleaning
[2025-06-05 07:29:32] 2025-06-05 05:11:23,182 [wrapper] apfmon messages muted
[2025-06-05 07:29:32] 2025-06-05 05:11:23,305 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:29:32] 2025-06-05 05:11:23,408 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:29:32]  *** Error codes and diagnostics ***
[2025-06-05 07:29:32]     "exeErrorCode": 0,
[2025-06-05 07:29:32]     "exeErrorDiag": "",
[2025-06-05 07:29:32]     "pilotErrorCode": 0,
[2025-06-05 07:29:32]     "pilotErrorDiag": "",
[2025-06-05 07:29:32]  *** Listing of results directory ***
[2025-06-05 07:29:32] total 427768
[2025-06-05 07:29:32] -rw-r--r--. 1 boinc boinc    495897 May 28 07:33 pilot3.tar.gz
[2025-06-05 07:29:32] -rwx------. 1 boinc boinc     37140 May 28 08:25 runpilot2-wrapper.sh
[2025-06-05 07:29:32] -rw-r--r--. 1 boinc boinc      5111 May 28 08:25 queuedata.json
[2025-06-05 07:29:32] -rw-r--r--. 1 boinc boinc       100 Jun  5 01:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:29:32] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 01:27 run_atlas
[2025-06-05 07:29:32] -rw-r--r--. 1 boinc boinc       105 Jun  5 01:27 job.xml
[2025-06-05 07:29:32] -rw-r--r--. 1 boinc boinc      6392 Jun  5 01:27 init_data.xml
[2025-06-05 07:29:32] -rw-r--r--. 2 boinc boinc 223999319 Jun  5 01:27 EVNT.44871834._003125.pool.root.1
[2025-06-05 07:29:32] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:27 start_atlas.sh
[2025-06-05 07:29:32] drwxrwx--x. 2 boinc boinc        68 Jun  5 01:27 shared
[2025-06-05 07:29:32] -rw-r--r--. 2 boinc boinc    508875 Jun  5 01:27 input.tar.gz
[2025-06-05 07:29:32] -rw-r--r--. 1 boinc boinc         0 Jun  5 01:27 boinc_lockfile
[2025-06-05 07:29:32] -rw-r--r--. 1 boinc boinc      2558 Jun  5 01:27 pandaJob.out
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc    987117 Jun  5 01:30 agis_schedconf.cvmfs.json
[2025-06-05 07:29:32] drwx------. 4 boinc boinc      4096 Jun  5 01:30 pilot3
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc 205911856 Jun  5 07:08 HITS.44871837._080023.pool.root.1
[2025-06-05 07:29:32] -rw-r--r--. 1 boinc boinc       531 Jun  5 07:08 boinc_task_state.xml
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc      1019 Jun  5 07:09 memory_monitor_summary.json
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc   1598969 Jun  5 07:09 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc    429314 Jun  5 07:09 log.44871837._080023.job.log.tgz.1
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc        95 Jun  5 07:10 pilot_heartbeat.json
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc      7693 Jun  5 07:11 heartbeat.json
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc      4932 Jun  5 07:11 pilotlog.txt
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc   1724389 Jun  5 07:11 log.44871837._080023.job.log.1
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc       357 Jun  5 07:11 output.list
[2025-06-05 07:29:32] -rw-r--r--. 1 boinc boinc       620 Jun  5 07:11 runtime_log
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc   2170880 Jun  5 07:11 result.tar.gz
[2025-06-05 07:29:32] -rw-r--r--. 1 boinc boinc      8673 Jun  5 07:11 runtime_log.err
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc       657 Jun  5 07:11 PeHNDmmPPe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmi3SKDmOCiT8n.diag
[2025-06-05 07:29:32] -rw-r--r--. 1 boinc boinc      8192 Jun  5 07:29 boinc_mmap_file
[2025-06-05 07:29:32] -rw-r--r--. 1 boinc boinc        28 Jun  5 07:29 wrapper_checkpoint.txt
[2025-06-05 07:29:32] -rw-r--r--. 1 boinc boinc     20625 Jun  5 07:29 stderr.txt
[2025-06-05 07:29:32] HITS file was successfully produced:
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc 205911856 Jun  5 07:08 shared/HITS.pool.root.1
[2025-06-05 07:29:32]  *** Contents of shared directory: ***
[2025-06-05 07:29:32] total 422476
[2025-06-05 07:29:32] -rw-r--r--. 2 boinc boinc 223999319 Jun  5 01:27 ATLAS.root_0
[2025-06-05 07:29:32] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:27 start_atlas.sh
[2025-06-05 07:29:32] -rw-r--r--. 2 boinc boinc    508875 Jun  5 01:27 input.tar.gz
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc 205911856 Jun  5 07:08 HITS.pool.root.1
[2025-06-05 07:29:32] -rw-------. 1 boinc boinc   2170880 Jun  5 07:11 result.tar.gz
07:29:34 (25645): run_atlas exited; CPU time 75734.933142
07:29:34 (25645): called boinc_finish(0)

</stderr_txt>
]]>

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