Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:29:21 (1954327): wrapper (7.7.26015): starting
18:29:21 (1954327): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:29:21] Arguments: --nthreads 8
[2025-06-04 18:29:21] Threads: 8
[2025-06-04 18:29:21] Checking for CVMFS
[2025-06-04 18:29:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:29:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:29:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:29:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:29:22] 2.12.6.0 8763 33388 651356 146797 3 343 24446208 32935936 35525 16776704 0 467580717 99.684 372570068 37285 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 18:29:22] CVMFS is ok
[2025-06-04 18:29:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:29:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:29:22] Further information can be found at the LHC@home message board.
[2025-06-04 18:29:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:29:22] Checking for apptainer binary...
[2025-06-04 18:29:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:29:22] Running /usr/bin/apptainer --version
[2025-06-04 18:29:22] apptainer version 1.4.1-1.el9
[2025-06-04 18:29:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:29:22] c7-9-14.aglt2.org
[2025-06-04 18:29:22] apptainer works
[2025-06-04 18:29:22] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:29:22] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:29:22] Starting ATLAS job with PandaID=6667579977
[2025-06-04 18:29:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:33:47]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:33:47]  mtime=0
[2025-06-04 19:33:47]  protocol_id=None
[2025-06-04 19:33:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 19:33:47]  replicas=None
[2025-06-04 19:33:47]  scope=mc23_13p6TeV
[2025-06-04 19:33:47]  status=None
[2025-06-04 19:33:47]  status_code=0
[2025-06-04 19:33:47]  storage_token=
[2025-06-04 19:33:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667579977/log.44871837._073041.job.log.tgz.1
[2025-06-04 19:33:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/0b/log.44871837._073041.job.log.tgz.1
[2025-06-04 19:33:47]  workdir=None
[2025-06-04 19:33:47] ]
[2025-06-04 19:33:47] 2025-06-04 23:33:19,291 | INFO     | transferring file log.44871837._073041.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667579977/log.44871837._073041.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 19:33:47] 2025-06-04 23:33:19,291 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667579977/log.44871837._073041.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._073041.job
[2025-06-04 19:33:47] 2025-06-04 23:33:19,302 | INFO     | adding to output.list: log.44871837._073041.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/0b/log.44871837._073041.job.log.tg
[2025-06-04 19:33:47] 2025-06-04 23:33:19,303 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 19:33:47] 2025-06-04 23:33:19,303 | INFO     | summary of transferred files:
[2025-06-04 19:33:47] 2025-06-04 23:33:19,303 | INFO     |  -- lfn=log.44871837._073041.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 19:33:47] 2025-06-04 23:33:19,303 | INFO     | stage-out finished correctly
[2025-06-04 19:33:47] 2025-06-04 23:33:20,112 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 19:33:47] 2025-06-04 23:33:20,757 | INFO     | monitor loop #281: job 0:6667579977 is in state 'finished'
[2025-06-04 19:33:47] 2025-06-04 23:33:20,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:33:47] 2025-06-04 23:33:22,694 | INFO     | job 6667579977 has state=finished
[2025-06-04 19:33:47] 2025-06-04 23:33:22,696 | INFO     | preparing for final server update for job 6667579977 in state='finished'
[2025-06-04 19:33:47] 2025-06-04 23:33:22,758 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 19:33:47] 2025-06-04 23:33:22,758 | INFO     | this job has now completed (state=finished)
[2025-06-04 19:33:47] 2025-06-04 23:33:22,758 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 19:33:47] 2025-06-04 23:33:22,758 | INFO     | log transfer has been attempted: DONE
[2025-06-04 19:33:47] 2025-06-04 23:33:22,758 | INFO     | job 6667579977 has finished - writing final server update
[2025-06-04 19:33:47] 2025-06-04 23:33:22,758 | INFO     | total number of processed events: 400 (read)
[2025-06-04 19:33:47] 2025-06-04 23:33:22,777 | INFO     | executing command: lscpu
[2025-06-04 19:33:47] 2025-06-04 23:33:22,867 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 19:33:47] 2025-06-04 23:33:23,261 | INFO     | monitor loop #282: job 0:6667579977 is in state 'finished'
[2025-06-04 19:33:47] 2025-06-04 23:33:23,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:33:47] 2025-06-04 23:33:24,278 | INFO     | PID=1957898 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 19:33:47] 2025-06-04 23:33:24,278 | INFO     | .. there are 47 such processes running
[2025-06-04 19:33:47] 2025-06-04 23:33:25,763 | INFO     | monitor loop #283: job 0:6667579977 is in state 'finished'
[2025-06-04 19:33:47] 2025-06-04 23:33:25,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:33:47] 2025-06-04 23:33:26,849 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 19:33:47] 2025-06-04 23:33:26,850 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667579977/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:33:47] 2025-06-04 23:33:26,850 | INFO     | extracted standard info from prmon json
[2025-06-04 19:33:47] 2025-06-04 23:33:26,850 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:33:47] 2025-06-04 23:33:26,850 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:33:47] 2025-06-04 23:33:26,850 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:33:47] 2025-06-04 23:33:26,850 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:33:47] 2025-06-04 23:33:26,851 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:33:47] 2025-06-04 23:33:26,852 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 19:33:47] 2025-06-04 23:33:26,852 | INFO     | sum of deviations: -3956623480.0
[2025-06-04 19:33:47] 2025-06-04 23:33:26,852 | INFO     | mean x: 1749078179.5
[2025-06-04 19:33:47] 2025-06-04 23:33:26,852 | INFO     | mean y: 2301629.6785714286
[2025-06-04 19:33:47] 2025-06-04 23:33:26,852 | INFO     | -- intersect: 127127004129.47246
[2025-06-04 19:33:47] 2025-06-04 23:33:26,852 | INFO     | intersect: 127127004129.47246
[2025-06-04 19:33:47] 2025-06-04 23:33:26,852 | INFO     | chi2: 0.055794456329780195
[2025-06-04 19:33:47] 2025-06-04 23:33:26,852 | INFO     | -- intersect: 127127004129.47246
[2025-06-04 19:33:47] 2025-06-04 23:33:26,852 | INFO     | current memory leak: -72.68 B/s (using 56 data points, chi2=0.06)
[2025-06-04 19:33:47] 2025-06-04 23:33:26,852 | INFO     | ..............................
[2025-06-04 19:33:47] 2025-06-04 23:33:26,853 | INFO     | . Timing measurements:
[2025-06-04 19:33:47] 2025-06-04 23:33:26,853 | INFO     | . get job = 0 s
[2025-06-04 19:33:47] 2025-06-04 23:33:26,853 | INFO     | . initial setup = 2 s
[2025-06-04 19:33:47] 2025-06-04 23:33:26,853 | INFO     | . payload setup = 6 s
[2025-06-04 19:33:47] 2025-06-04 23:33:26,853 | INFO     | . stage-in = 0 s
[2025-06-04 19:33:47] 2025-06-04 23:33:26,853 | INFO     | . payload execution = 3802 s
[2025-06-04 19:33:47] 2025-06-04 23:33:26,853 | INFO     | . stage-out = 0 s
[2025-06-04 19:33:47] 2025-06-04 23:33:26,853 | INFO     | . log creation = 0 s
[2025-06-04 19:33:47] 2025-06-04 23:33:26,853 | INFO     | ..............................
[2025-06-04 19:33:47] 2025-06-04 23:33:26,973 | INFO     | 
[2025-06-04 19:33:47] 2025-06-04 23:33:26,973 | INFO     | job summary report
[2025-06-04 19:33:47] 2025-06-04 23:33:26,973 | INFO     | --------------------------------------------------
[2025-06-04 19:33:47] 2025-06-04 23:33:26,973 | INFO     | PanDA job id: 6667579977
[2025-06-04 19:33:47] 2025-06-04 23:33:26,973 | INFO     | task id: 44871837
[2025-06-04 19:33:47] 2025-06-04 23:33:26,973 | INFO     | errors: (none)
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | pilot state: finished 
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | transexitcode: 0
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | exeerrorcode: 0
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | exeerrordiag: 
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | exitcode: 0
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | exitmsg: OK
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | cpuconsumptiontime: 27802 s
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | nevents: 400
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | neventsw: 0
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | pid: 1972307
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | pgrp: 1972307
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | corecount: 8
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | event service: False
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | sizes: {0: 2397391, 4: 2397597, 11: 2397625, 3812: 2423375, 3813: 2432371, 3814: 2432371, 3821: 2432669}
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | --------------------------------------------------
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | 
[2025-06-04 19:33:47] 2025-06-04 23:33:26,974 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 19:33:47] 2025-06-04 23:33:26,990 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | job 6667579977 has completed (purged errors)
[2025-06-04 19:33:47] 2025-06-04 23:33:26,991 | INFO     | overall cleanup function is called
[2025-06-04 19:33:47] 2025-06-04 23:33:27,285 | INFO     | 3838s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 19:33:47] 2025-06-04 23:33:27,999 | INFO     | --- collectZombieJob: --- 10, [1972307]
[2025-06-04 19:33:47] 2025-06-04 23:33:28,000 | INFO     | zombie collector waiting for pid 1972307
[2025-06-04 19:33:47] 2025-06-04 23:33:28,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:33:47] 2025-06-04 23:33:28,000 | INFO     | collected zombie processes
[2025-06-04 19:33:47] 2025-06-04 23:33:28,000 | INFO     | will attempt to kill all subprocesses of pid=1972307
[2025-06-04 19:33:47] 2025-06-04 23:33:28,369 | INFO     | process IDs to be killed: [1972307] (in reverse order)
[2025-06-04 19:33:47] 2025-06-04 23:33:28,507 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:33:47] 2025-06-04 23:33:28,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:33:47] 2025-06-04 23:33:28,528 | INFO     | did not find any defunct processes belonging to 1972307
[2025-06-04 19:33:47] 2025-06-04 23:33:28,547 | INFO     | did not find any defunct processes belonging to 1972307
[2025-06-04 19:33:47] 2025-06-04 23:33:28,547 | INFO     | ready for new job
[2025-06-04 19:33:47] 2025-06-04 23:33:28,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:33:47] 2025-06-04 23:33:28,548 | INFO     | **************************************
[2025-06-04 19:33:47] 2025-06-04 23:33:28,548 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:33:47] 2025-06-04 23:33:28,548 | INFO     | **************************************
[2025-06-04 19:33:47] 2025-06-04 23:33:28,548 | INFO     | 
[2025-06-04 19:33:47] 2025-06-04 23:33:28,567 | INFO     | architecture information:
[2025-06-04 19:33:47] 2025-06-04 23:33:28,567 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:33:47] 2025-06-04 23:33:28,581 | INFO     | cat /etc/os-release:
[2025-06-04 19:33:47] NAME="CentOS Linux"
[2025-06-04 19:33:47] VERSION="7 (Core)"
[2025-06-04 19:33:47] ID="centos"
[2025-06-04 19:33:47] ID_LIKE="rhel fedora"
[2025-06-04 19:33:47] VERSION_ID="7"
[2025-06-04 19:33:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:33:47] ANSI_COLOR="0;31"
[2025-06-04 19:33:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:33:47] HOME_URL="https://www.centos.org/"
[2025-06-04 19:33:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:33:47] 
[2025-06-04 19:33:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:33:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:33:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:33:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:33:47] 
[2025-06-04 19:33:47] 2025-06-04 23:33:28,581 | INFO     | **************************************
[2025-06-04 19:33:47] 2025-06-04 23:33:29,084 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 19:33:47] 2025-06-04 23:33:29,096 | INFO     | sufficient remaining disk space (74832674816 B)
[2025-06-04 19:33:47] 2025-06-04 23:33:29,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:33:47] 2025-06-04 23:33:29,096 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:33:47] 2025-06-04 23:33:29,097 | INFO     | update_server=False
[2025-06-04 19:33:47] 2025-06-04 23:33:29,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:33:47] 2025-06-04 23:33:29,097 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:33:47] 2025-06-04 23:33:29,097 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:33:47] 2025-06-04 23:33:29,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:33:47] 2025-06-04 23:33:29,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:33:47] 2025-06-04 23:33:29,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:33:47] 2025-06-04 23:33:29,272 | INFO     | aborting loop
[2025-06-04 19:33:47] 2025-06-04 23:33:29,507 | INFO     | all data control threads have been joined
[2025-06-04 19:33:47] 2025-06-04 23:33:29,603 | INFO     | all payload control threads have been joined
[2025-06-04 19:33:47] 2025-06-04 23:33:29,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:33:47] 2025-06-04 23:33:30,102 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:30,278 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:30,402 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:30,425 | INFO     | all job control threads have been joined
[2025-06-04 19:33:47] 2025-06-04 23:33:30,489 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:30,512 | INFO     | [data] control thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:30,609 | INFO     | [payload] control thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:30,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:33:47] 2025-06-04 23:33:30,892 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:31,015 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:31,033 | INFO     | [job] validate thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:31,432 | INFO     | [job] control thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:31,473 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:31,557 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:31,860 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:31,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:33:47] 2025-06-04 23:33:32,923 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:34,678 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:39,231 | INFO     | job.realtimelogging is not enabled
[2025-06-04 19:33:47] 2025-06-04 23:33:40,237 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:33:47] 2025-06-04 23:33:42,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140429858699072)>', '<ExcThread(monitor, started 140429215377152)>']
[2025-06-04 19:33:47] 2025-06-04 23:33:42,164 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:33:47] 2025-06-04 23:33:42,165 | INFO     | [monitor] control thread has ended
[2025-06-04 19:33:47] 2025-06-04 23:33:47,130 | INFO     | all workflow threads have been joined
[2025-06-04 19:33:47] 2025-06-04 23:33:47,131 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:33:47] 2025-06-04 23:33:47,133 | INFO     | traces error code: 0
[2025-06-04 19:33:47] 2025-06-04 23:33:47,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:33:47] 2025-06-04 23:33:47,295 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:33:47] 2025-06-04 23:33:47,298 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:33:47] 2025-06-04 23:33:47,301 [wrapper] pilotpid: 1957898
[2025-06-04 19:33:47] 2025-06-04 23:33:47,304 [wrapper] Pilot exit status: 0
[2025-06-04 19:33:47] 2025-06-04 23:33:47,314 [wrapper] pandaids: 6667579977
[2025-06-04 19:33:47] 2025-06-04 23:33:47,404 [wrapper] cleanup supervisor_pilot 2416278 1957899
[2025-06-04 19:33:47] 2025-06-04 23:33:47,407 [wrapper] Test setup, not cleaning
[2025-06-04 19:33:47] 2025-06-04 23:33:47,409 [wrapper] apfmon messages muted
[2025-06-04 19:33:47] 2025-06-04 23:33:47,411 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:33:47] 2025-06-04 23:33:47,413 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:33:47]  *** Error codes and diagnostics ***
[2025-06-04 19:33:47]     "exeErrorCode": 0,
[2025-06-04 19:33:47]     "exeErrorDiag": "",
[2025-06-04 19:33:47]     "pilotErrorCode": 0,
[2025-06-04 19:33:47]     "pilotErrorDiag": "",
[2025-06-04 19:33:47]  *** Listing of results directory ***
[2025-06-04 19:33:47] total 415520
[2025-06-04 19:33:47] -rw-r--r--. 1 boincer umatlas    495897 May 27 15:34 pilot3.tar.gz
[2025-06-04 19:33:47] -rw-r--r--. 1 boincer umatlas      5111 May 27 16:21 queuedata.json
[2025-06-04 19:33:47] -rwx------. 1 boincer umatlas     37140 May 27 16:22 runpilot2-wrapper.sh
[2025-06-04 19:33:47] -rw-r--r--. 1 boincer umatlas       100 Jun  4 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:33:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 18:29 run_atlas
[2025-06-04 19:33:47] -rw-r--r--. 1 boincer umatlas       105 Jun  4 18:29 job.xml
[2025-06-04 19:33:47] -rw-r--r--. 2 boincer umatlas 222878302 Jun  4 18:29 EVNT.44871834._002865.pool.root.1
[2025-06-04 19:33:47] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 18:29 input.tar.gz
[2025-06-04 19:33:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 18:29 start_atlas.sh
[2025-06-04 19:33:47] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 18:29 shared
[2025-06-04 19:33:47] -rw-r--r--. 1 boincer umatlas         0 Jun  4 18:29 boinc_lockfile
[2025-06-04 19:33:47] -rw-r--r--. 1 boincer umatlas      2558 Jun  4 18:29 pandaJob.out
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas    987032 Jun  4 18:29 agis_schedconf.cvmfs.json
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas   1598969 Jun  4 18:29 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:33:47] drwx------. 4 boincer umatlas      4096 Jun  4 18:29 pilot3
[2025-06-04 19:33:47] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 19:29 init_data.xml
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas        95 Jun  4 19:32 pilot_heartbeat.json
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas 197427581 Jun  4 19:32 HITS.44871837._073041.pool.root.1
[2025-06-04 19:33:47] -rw-r--r--. 1 boincer umatlas       529 Jun  4 19:32 boinc_task_state.xml
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas      1036 Jun  4 19:33 memory_monitor_summary.json
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas    286856 Jun  4 19:33 log.44871837._073041.job.log.tgz.1
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas      7694 Jun  4 19:33 heartbeat.json
[2025-06-04 19:33:47] -rw-r--r--. 1 boincer umatlas        27 Jun  4 19:33 wrapper_checkpoint.txt
[2025-06-04 19:33:47] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 19:33 boinc_mmap_file
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas      4548 Jun  4 19:33 pilotlog.txt
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas    385207 Jun  4 19:33 log.44871837._073041.job.log.1
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas       357 Jun  4 19:33 output.list
[2025-06-04 19:33:47] -rw-r--r--. 1 boincer umatlas       620 Jun  4 19:33 runtime_log
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas    696320 Jun  4 19:33 result.tar.gz
[2025-06-04 19:33:47] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 19:33 runtime_log.err
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas       650 Jun  4 19:33 dsMODmxzFe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmyMSKDmkYDh8m.diag
[2025-06-04 19:33:47] -rw-r--r--. 1 boincer umatlas     21726 Jun  4 19:33 stderr.txt
[2025-06-04 19:33:47] HITS file was successfully produced:
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas 197427581 Jun  4 19:32 shared/HITS.pool.root.1
[2025-06-04 19:33:47]  *** Contents of shared directory: ***
[2025-06-04 19:33:47] total 411664
[2025-06-04 19:33:47] -rw-r--r--. 2 boincer umatlas 222878302 Jun  4 18:29 ATLAS.root_0
[2025-06-04 19:33:47] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 18:29 input.tar.gz
[2025-06-04 19:33:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 18:29 start_atlas.sh
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas 197427581 Jun  4 19:32 HITS.pool.root.1
[2025-06-04 19:33:47] -rw-------. 1 boincer umatlas    696320 Jun  4 19:33 result.tar.gz
19:33:48 (1954327): run_atlas exited; CPU time 27866.697376
19:33:48 (1954327): called boinc_finish(0)

</stderr_txt>
]]>

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