Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:14:22 (583238): wrapper (7.7.26015): starting
20:14:22 (583238): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 20:14:23] Arguments: --nthreads 12
[2025-06-04 20:14:23] Threads: 12
[2025-06-04 20:14:23] Checking for CVMFS
[2025-06-04 20:14:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:14:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:14:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:14:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:14:23] 2.12.6.0 4996 1457 88412 146798 0 71 28105097 32935936 14250 16776704 0 3252870 99.700 2993384 32478 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 20:14:23] CVMFS is ok
[2025-06-04 20:14:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 20:14:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 20:14:23] Further information can be found at the LHC@home message board.
[2025-06-04 20:14:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:14:23] Checking for apptainer binary...
[2025-06-04 20:14:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:14:23] Running /usr/bin/apptainer --version
[2025-06-04 20:14:24] apptainer version 1.4.1-1.el9
[2025-06-04 20:14:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:14:24] c6-5-7-3.aglt2.org
[2025-06-04 20:14:24] apptainer works
[2025-06-04 20:14:24] Set ATHENA_PROC_NUMBER=12
[2025-06-04 20:14:24] Set ATHENA_CORE_NUMBER=12
[2025-06-04 20:14:24] Starting ATLAS job with PandaID=6668990014
[2025-06-04 20:14:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:06:02]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:06:02] 2025-06-05 03:05:48,297 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:06:02] 2025-06-05 03:05:48,298 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:06:02] 2025-06-05 03:05:48,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:06:02] 2025-06-05 03:05:48,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:06:02] 2025-06-05 03:05:48,301 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:06:02] 2025-06-05 03:05:48,302 | INFO     | sum of square deviations: 1444053406.4910157
[2025-06-04 23:06:02] 2025-06-05 03:05:48,302 | INFO     | sum of deviations: 25364527059.53292
[2025-06-04 23:06:02] 2025-06-05 03:05:48,303 | INFO     | mean x: 1749087640.4131737
[2025-06-04 23:06:02] 2025-06-05 03:05:48,303 | INFO     | mean y: 2339665.48502994
[2025-06-04 23:06:02] 2025-06-05 03:05:48,303 | INFO     | -- intersect: -30720056462.895664
[2025-06-04 23:06:02] 2025-06-05 03:05:48,303 | INFO     | intersect: -30720056462.895664
[2025-06-04 23:06:02] 2025-06-05 03:05:48,303 | INFO     | chi2: 1.976052589475685
[2025-06-04 23:06:02] 2025-06-05 03:05:48,303 | INFO     | sum of square deviations: 1318202323.1111114
[2025-06-04 23:06:02] 2025-06-05 03:05:48,304 | INFO     | sum of deviations: 28166435949.222218
[2025-06-04 23:06:02] 2025-06-05 03:05:48,304 | INFO     | mean x: 1749087487.925926
[2025-06-04 23:06:02] 2025-06-05 03:05:48,304 | INFO     | mean y: 2343005.3518518517
[2025-06-04 23:06:02] 2025-06-05 03:05:48,304 | INFO     | -- intersect: -37370949268.91687
[2025-06-04 23:06:02] 2025-06-05 03:05:48,304 | INFO     | intersect: -37370949268.91687
[2025-06-04 23:06:02] 2025-06-05 03:05:48,304 | INFO     | chi2: 1.9409801576729175
[2025-06-04 23:06:02] 2025-06-05 03:05:48,305 | INFO     | current chi2=1.9409801576729175 (change=1.774873401121043 %)
[2025-06-04 23:06:02] 2025-06-05 03:05:48,305 | INFO     | right removable region: 161
[2025-06-04 23:06:02] 2025-06-05 03:05:48,305 | INFO     | sum of square deviations: 1318160233.1111114
[2025-06-04 23:06:02] 2025-06-05 03:05:48,305 | INFO     | sum of deviations: -4385723580.259261
[2025-06-04 23:06:02] 2025-06-05 03:05:48,306 | INFO     | mean x: 1749087792.925926
[2025-06-04 23:06:02] 2025-06-05 03:05:48,306 | INFO     | mean y: 2375418.8950617285
[2025-06-04 23:06:02] 2025-06-05 03:05:48,306 | INFO     | -- intersect: 5821861839.960724
[2025-06-04 23:06:02] 2025-06-05 03:05:48,306 | INFO     | intersect: 5821861839.960724
[2025-06-04 23:06:02] 2025-06-05 03:05:48,306 | INFO     | chi2: 0.24975635321247047
[2025-06-04 23:06:02] 2025-06-05 03:05:48,306 | INFO     | current chi2=0.24975635321247047 (change=87.3608448204944 %)
[2025-06-04 23:06:02] 2025-06-05 03:05:48,306 | INFO     | sum of square deviations: 1199811844.547775
[2025-06-04 23:06:02] 2025-06-05 03:05:48,307 | INFO     | sum of deviations: -11002655798.694262
[2025-06-04 23:06:02] 2025-06-05 03:05:48,307 | INFO     | mean x: 1749087945.433121
[2025-06-04 23:06:02] 2025-06-05 03:05:48,307 | INFO     | mean y: 2383827.171974522
[2025-06-04 23:06:02] 2025-06-05 03:05:48,307 | INFO     | -- intersect: 16042075977.818737
[2025-06-04 23:06:02] 2025-06-05 03:05:48,307 | INFO     | intersect: 16042075977.818737
[2025-06-04 23:06:02] 2025-06-05 03:05:48,307 | INFO     | chi2: 0.1231873215078389
[2025-06-04 23:06:02] 2025-06-05 03:05:48,307 | INFO     | current chi2=0.1231873215078389 (change=50.67700183664914 %)
[2025-06-04 23:06:02] 2025-06-05 03:05:48,308 | INFO     | sum of square deviations: 1088784950.2039502
[2025-06-04 23:06:02] 2025-06-05 03:05:48,309 | INFO     | sum of deviations: -11394217660.855265
[2025-06-04 23:06:02] 2025-06-05 03:05:48,309 | INFO     | mean x: 1749088097.9276316
[2025-06-04 23:06:02] 2025-06-05 03:05:48,309 | INFO     | mean y: 2384340.013157895
[2025-06-04 23:06:02] 2025-06-05 03:05:48,309 | INFO     | -- intersect: 18306724873.06846
[2025-06-04 23:06:02] 2025-06-05 03:05:48,309 | INFO     | intersect: 18306724873.06846
[2025-06-04 23:06:02] 2025-06-05 03:05:48,309 | INFO     | chi2: 0.11800496755451054
[2025-06-04 23:06:02] 2025-06-05 03:05:48,309 | INFO     | current chi2=0.11800496755451054 (change=4.2068890612242 %)
[2025-06-04 23:06:02] 2025-06-05 03:05:48,309 | INFO     | left removable region: 30
[2025-06-04 23:06:02] 2025-06-05 03:05:48,310 | INFO     | sum of square deviations: 696969196.1984735
[2025-06-04 23:06:02] 2025-06-05 03:05:48,310 | INFO     | sum of deviations: -3862446919.694659
[2025-06-04 23:06:02] 2025-06-05 03:05:48,310 | INFO     | mean x: 1749088372.4351146
[2025-06-04 23:06:02] 2025-06-05 03:05:48,310 | INFO     | mean y: 2382812.9770992366
[2025-06-04 23:06:02] 2025-06-05 03:05:48,310 | INFO     | -- intersect: 9695438163.535145
[2025-06-04 23:06:02] 2025-06-05 03:05:48,310 | INFO     | intersect: 9695438163.535145
[2025-06-04 23:06:02] 2025-06-05 03:05:48,311 | INFO     | chi2: 0.08338381675961132
[2025-06-04 23:06:02] 2025-06-05 03:05:48,311 | INFO     | -- intersect: 9695438163.535145
[2025-06-04 23:06:02] 2025-06-05 03:05:48,311 | INFO     | current memory leak: -5.54 B/s (using 131 data points, chi2=0.08)
[2025-06-04 23:06:02] 2025-06-05 03:05:48,311 | INFO     | ..............................
[2025-06-04 23:06:02] 2025-06-05 03:05:48,311 | INFO     | . Timing measurements:
[2025-06-04 23:06:02] 2025-06-05 03:05:48,312 | INFO     | . get job = 0 s
[2025-06-04 23:06:02] 2025-06-05 03:05:48,312 | INFO     | . initial setup = 4 s
[2025-06-04 23:06:02] 2025-06-05 03:05:48,312 | INFO     | . payload setup = 16 s
[2025-06-04 23:06:02] 2025-06-05 03:05:48,312 | INFO     | . stage-in = 0 s
[2025-06-04 23:06:02] 2025-06-05 03:05:48,312 | INFO     | . payload execution = 10176 s
[2025-06-04 23:06:02] 2025-06-05 03:05:48,312 | INFO     | . stage-out = 0 s
[2025-06-04 23:06:02] 2025-06-05 03:05:48,312 | INFO     | . log creation = 0 s
[2025-06-04 23:06:02] 2025-06-05 03:05:48,312 | INFO     | ..............................
[2025-06-04 23:06:02] 2025-06-05 03:05:48,607 | INFO     | 
[2025-06-04 23:06:02] 2025-06-05 03:05:48,608 | INFO     | job summary report
[2025-06-04 23:06:02] 2025-06-05 03:05:48,608 | INFO     | --------------------------------------------------
[2025-06-04 23:06:02] 2025-06-05 03:05:48,608 | INFO     | PanDA job id: 6668990014
[2025-06-04 23:06:02] 2025-06-05 03:05:48,608 | INFO     | task id: 44871837
[2025-06-04 23:06:02] 2025-06-05 03:05:48,608 | INFO     | errors: (none)
[2025-06-04 23:06:02] 2025-06-05 03:05:48,608 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:06:02] 2025-06-05 03:05:48,608 | INFO     | pilot state: finished 
[2025-06-04 23:06:02] 2025-06-05 03:05:48,608 | INFO     | transexitcode: 0
[2025-06-04 23:06:02] 2025-06-05 03:05:48,608 | INFO     | exeerrorcode: 0
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | exeerrordiag: 
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | exitcode: 0
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | exitmsg: OK
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | cpuconsumptiontime: 48944 s
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | nevents: 400
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | neventsw: 0
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | pid: 596505
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | pgrp: 596505
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | corecount: 12
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | event service: False
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | sizes: {0: 2397165, 1: 2397420, 2: 2397420, 13: 2397448, 22: 2397710, 23: 2397738, 10196: 2426288, 10197: 2435229, 10200: 2435285, 10207: 2435455}
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | --------------------------------------------------
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | 
[2025-06-04 23:06:02] 2025-06-05 03:05:48,609 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 23:06:02] 2025-06-05 03:05:48,631 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,631 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,631 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,631 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,632 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,632 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,632 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,632 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:06:02] 2025-06-05 03:05:48,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,632 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:06:02] 2025-06-05 03:05:48,633 | INFO     | job 6668990014 has completed (purged errors)
[2025-06-04 23:06:02] 2025-06-05 03:05:48,633 | INFO     | overall cleanup function is called
[2025-06-04 23:06:02] 2025-06-05 03:05:49,640 | INFO     | --- collectZombieJob: --- 10, [596505]
[2025-06-04 23:06:02] 2025-06-05 03:05:49,641 | INFO     | zombie collector waiting for pid 596505
[2025-06-04 23:06:02] 2025-06-05 03:05:49,641 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:06:02] 2025-06-05 03:05:49,641 | INFO     | collected zombie processes
[2025-06-04 23:06:02] 2025-06-05 03:05:49,641 | INFO     | will attempt to kill all subprocesses of pid=596505
[2025-06-04 23:06:02] 2025-06-05 03:05:49,868 | INFO     | process IDs to be killed: [596505] (in reverse order)
[2025-06-04 23:06:02] 2025-06-05 03:05:49,959 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:06:02] 2025-06-05 03:05:49,960 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:06:02] 2025-06-05 03:05:49,970 | INFO     | did not find any defunct processes belonging to 596505
[2025-06-04 23:06:02] 2025-06-05 03:05:49,980 | INFO     | did not find any defunct processes belonging to 596505
[2025-06-04 23:06:02] 2025-06-05 03:05:49,980 | INFO     | ready for new job
[2025-06-04 23:06:02] 2025-06-05 03:05:49,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:06:02] 2025-06-05 03:05:49,982 | INFO     | **************************************
[2025-06-04 23:06:02] 2025-06-05 03:05:49,982 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:06:02] 2025-06-05 03:05:49,982 | INFO     | **************************************
[2025-06-04 23:06:02] 2025-06-05 03:05:49,982 | INFO     | 
[2025-06-04 23:06:02] 2025-06-05 03:05:49,998 | INFO     | architecture information:
[2025-06-04 23:06:02] 2025-06-05 03:05:49,998 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:06:02] 2025-06-05 03:05:50,014 | INFO     | cat /etc/os-release:
[2025-06-04 23:06:02] NAME="CentOS Linux"
[2025-06-04 23:06:02] VERSION="7 (Core)"
[2025-06-04 23:06:02] ID="centos"
[2025-06-04 23:06:02] ID_LIKE="rhel fedora"
[2025-06-04 23:06:02] VERSION_ID="7"
[2025-06-04 23:06:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:06:02] ANSI_COLOR="0;31"
[2025-06-04 23:06:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:06:02] HOME_URL="https://www.centos.org/"
[2025-06-04 23:06:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:06:02] 
[2025-06-04 23:06:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:06:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:06:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:06:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:06:02] 
[2025-06-04 23:06:02] 2025-06-05 03:05:50,014 | INFO     | **************************************
[2025-06-04 23:06:02] 2025-06-05 03:05:50,517 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 23:06:02] 2025-06-05 03:05:50,534 | INFO     | sufficient remaining disk space (76556533760 B)
[2025-06-04 23:06:02] 2025-06-05 03:05:50,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:06:02] 2025-06-05 03:05:50,534 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:06:02] 2025-06-05 03:05:50,535 | INFO     | update_server=False
[2025-06-04 23:06:02] 2025-06-05 03:05:50,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:06:02] 2025-06-05 03:05:50,535 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 23:06:02] 2025-06-05 03:05:50,535 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:06:02] 2025-06-05 03:05:50,535 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:06:02] 2025-06-05 03:05:50,535 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:06:02] 2025-06-05 03:05:50,565 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 23:06:02] 2025-06-05 03:05:50,566 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 23:06:02] 2025-06-05 03:05:50,566 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:06:02] 2025-06-05 03:05:50,566 | INFO     | will abort loop
[2025-06-04 23:06:02] 2025-06-05 03:05:50,808 | INFO     | all job control threads have been joined
[2025-06-04 23:06:02] 2025-06-05 03:05:51,485 | INFO     | all data control threads have been joined
[2025-06-04 23:06:02] 2025-06-05 03:05:51,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:06:02] 2025-06-05 03:05:51,540 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:51,572 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:51,814 | INFO     | [job] control thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:51,855 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:51,966 | INFO     | all payload control threads have been joined
[2025-06-04 23:06:02] 2025-06-05 03:05:52,041 | INFO     | [job] validate thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:52,045 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:52,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:06:02] 2025-06-05 03:05:52,445 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:52,490 | INFO     | [data] control thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:52,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:52,776 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:52,885 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:52,972 | INFO     | [payload] control thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:53,025 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:53,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:06:02] 2025-06-05 03:05:53,540 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:54,421 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:56,125 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:06:02] 2025-06-05 03:05:56,963 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757020428096)>', '<ExcThread(monitor, started 139756155434752)>']
[2025-06-04 23:06:02] 2025-06-05 03:05:57,572 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:06:02] 2025-06-05 03:05:57,573 | INFO     | [monitor] control thread has ended
[2025-06-04 23:06:02] 2025-06-05 03:06:01,988 | INFO     | all workflow threads have been joined
[2025-06-04 23:06:02] 2025-06-05 03:06:01,989 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:06:02] 2025-06-05 03:06:01,989 | INFO     | traces error code: 0
[2025-06-04 23:06:02] 2025-06-05 03:06:01,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:06:02] 2025-06-05 03:06:02,210 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:06:02] 2025-06-05 03:06:02,213 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:06:02] 2025-06-05 03:06:02,216 [wrapper] pilotpid: 587420
[2025-06-04 23:06:02] 2025-06-05 03:06:02,218 [wrapper] Pilot exit status: 0
[2025-06-04 23:06:02] 2025-06-05 03:06:02,230 [wrapper] pandaids: 6668990014
[2025-06-04 23:06:02] 2025-06-05 03:06:02,295 [wrapper] cleanup supervisor_pilot 1048054 587421
[2025-06-04 23:06:02] 2025-06-05 03:06:02,298 [wrapper] Test setup, not cleaning
[2025-06-04 23:06:02] 2025-06-05 03:06:02,301 [wrapper] apfmon messages muted
[2025-06-04 23:06:02] 2025-06-05 03:06:02,304 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:06:02] 2025-06-05 03:06:02,307 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:06:02]  *** Error codes and diagnostics ***
[2025-06-04 23:06:02]     "exeErrorCode": 0,
[2025-06-04 23:06:02]     "exeErrorDiag": "",
[2025-06-04 23:06:02]     "pilotErrorCode": 0,
[2025-06-04 23:06:02]     "pilotErrorDiag": "",
[2025-06-04 23:06:02]  *** Listing of results directory ***
[2025-06-04 23:06:02] total 412704
[2025-06-04 23:06:02] -rw-r--r--. 1 boincer umatlas    495897 May 28 19:14 pilot3.tar.gz
[2025-06-04 23:06:02] -rwx------. 1 boincer umatlas     37140 May 28 19:16 runpilot2-wrapper.sh
[2025-06-04 23:06:02] -rw-r--r--. 1 boincer umatlas      5111 May 28 19:16 queuedata.json
[2025-06-04 23:06:02] -rw-r--r--. 1 boincer umatlas       100 Jun  4 20:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:06:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 20:14 run_atlas
[2025-06-04 23:06:02] -rw-r--r--. 1 boincer umatlas       105 Jun  4 20:14 job.xml
[2025-06-04 23:06:02] -rw-r--r--. 2 boincer umatlas 221256469 Jun  4 20:14 EVNT.44871834._003568.pool.root.1
[2025-06-04 23:06:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 20:14 start_atlas.sh
[2025-06-04 23:06:02] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 20:14 shared
[2025-06-04 23:06:02] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 20:14 input.tar.gz
[2025-06-04 23:06:02] -rw-r--r--. 1 boincer umatlas         0 Jun  4 20:14 boinc_lockfile
[2025-06-04 23:06:02] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 20:14 pandaJob.out
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas    987117 Jun  4 20:14 agis_schedconf.cvmfs.json
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas   1598969 Jun  4 20:14 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:06:02] drwx------. 4 boincer umatlas      4096 Jun  4 20:14 pilot3
[2025-06-04 23:06:02] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 23:00 init_data.xml
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas        95 Jun  4 23:04 pilot_heartbeat.json
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas 194941166 Jun  4 23:05 HITS.44871837._091746.pool.root.1
[2025-06-04 23:06:02] -rw-r--r--. 1 boincer umatlas       530 Jun  4 23:05 boinc_task_state.xml
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas      1043 Jun  4 23:05 memory_monitor_summary.json
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas    407489 Jun  4 23:05 log.44871837._091746.job.log.tgz.1
[2025-06-04 23:06:02] -rw-r--r--. 1 boincer umatlas        28 Jun  4 23:05 wrapper_checkpoint.txt
[2025-06-04 23:06:02] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 23:05 boinc_mmap_file
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas      7735 Jun  4 23:05 heartbeat.json
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas      4662 Jun  4 23:06 pilotlog.txt
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas    883902 Jun  4 23:06 log.44871837._091746.job.log.1
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas       357 Jun  4 23:06 output.list
[2025-06-04 23:06:02] -rw-r--r--. 1 boincer umatlas       620 Jun  4 23:06 runtime_log
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas   1310720 Jun  4 23:06 result.tar.gz
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas       655 Jun  4 23:06 SBRKDmKBfe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmcIUKDmgtG9fn.diag
[2025-06-04 23:06:02] -rw-r--r--. 1 boincer umatlas      8662 Jun  4 23:06 runtime_log.err
[2025-06-04 23:06:02] -rw-r--r--. 1 boincer umatlas     20931 Jun  4 23:06 stderr.txt
[2025-06-04 23:06:02] HITS file was successfully produced:
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas 194941166 Jun  4 23:05 shared/HITS.pool.root.1
[2025-06-04 23:06:02]  *** Contents of shared directory: ***
[2025-06-04 23:06:02] total 408248
[2025-06-04 23:06:02] -rw-r--r--. 2 boincer umatlas 221256469 Jun  4 20:14 ATLAS.root_0
[2025-06-04 23:06:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 20:14 start_atlas.sh
[2025-06-04 23:06:02] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 20:14 input.tar.gz
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas 194941166 Jun  4 23:05 HITS.pool.root.1
[2025-06-04 23:06:02] -rw-------. 1 boincer umatlas   1310720 Jun  4 23:06 result.tar.gz
23:06:03 (583238): run_atlas exited; CPU time 49162.932187
23:06:03 (583238): called boinc_finish(0)

</stderr_txt>
]]>

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