Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:28:17 (11717): wrapper (7.7.26015): starting
18:28:17 (11717): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 18:28:17] Arguments: --nthreads 12
[2025-06-04 18:28:17] Threads: 12
[2025-06-04 18:28:17] Checking for CVMFS
[2025-06-04 18:28:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:28:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:28:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:28:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:28:17] 2.11.2.0 2924 36235 93848 146797 1 1 19374328 20275200 1 130560 0 16686711 99.983 7096676 8468 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 18:28:17] CVMFS is ok
[2025-06-04 18:28:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:28:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:28:17] Further information can be found at the LHC@home message board.
[2025-06-04 18:28:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:28:17] Checking for apptainer binary...
[2025-06-04 18:28:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:28:17] Running /usr/bin/apptainer --version
[2025-06-04 18:28:17] apptainer version 1.3.2-1.el7
[2025-06-04 18:28:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:28:19] c-205-28.aglt2.org
[2025-06-04 18:28:19] apptainer works
[2025-06-04 18:28:19] Set ATHENA_PROC_NUMBER=12
[2025-06-04 18:28:19] Set ATHENA_CORE_NUMBER=12
[2025-06-04 18:28:19] Starting ATLAS job with PandaID=6667435782
[2025-06-04 18:28:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:04:03]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:04:03]  lfn=log.44871837._072441.job.log.tgz.1
[2025-06-04 20:04:03]  mtime=0
[2025-06-04 20:04:03]  protocol_id=None
[2025-06-04 20:04:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 20:04:03]  replicas=None
[2025-06-04 20:04:03]  scope=mc23_13p6TeV
[2025-06-04 20:04:03]  status=None
[2025-06-04 20:04:03]  status_code=0
[2025-06-04 20:04:03]  storage_token=
[2025-06-04 20:04:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667435782/log.44871837._072441.job.log.tgz.1
[2025-06-04 20:04:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/59/log.44871837._072441.job.log.tgz.1
[2025-06-04 20:04:03]  workdir=None
[2025-06-04 20:04:03] ]
[2025-06-04 20:04:03] 2025-06-05 00:03:32,461 | INFO     | transferring file log.44871837._072441.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667435782/log.44871837._072441.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 20:04:03] 2025-06-05 00:03:32,461 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667435782/log.44871837._072441.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._072441.job
[2025-06-04 20:04:03] 2025-06-05 00:03:32,483 | INFO     | adding to output.list: log.44871837._072441.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/59/log.44871837._072441.job.log.tg
[2025-06-04 20:04:03] 2025-06-05 00:03:32,484 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 20:04:03] 2025-06-05 00:03:32,484 | INFO     | summary of transferred files:
[2025-06-04 20:04:03] 2025-06-05 00:03:32,484 | INFO     |  -- lfn=log.44871837._072441.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 20:04:03] 2025-06-05 00:03:32,485 | INFO     | stage-out finished correctly
[2025-06-04 20:04:03] 2025-06-05 00:03:34,203 | INFO     | monitor loop #426: job 0:6667435782 is in state 'finished'
[2025-06-04 20:04:03] 2025-06-05 00:03:34,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:04:03] 2025-06-05 00:03:36,042 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 20:04:03] 2025-06-05 00:03:36,724 | INFO     | monitor loop #427: job 0:6667435782 is in state 'finished'
[2025-06-04 20:04:03] 2025-06-05 00:03:36,724 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:04:03] 2025-06-05 00:03:38,712 | INFO     | PID=15312 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 20:04:03] 2025-06-05 00:03:38,970 | INFO     | job 6667435782 has state=finished
[2025-06-04 20:04:03] 2025-06-05 00:03:38,970 | INFO     | preparing for final server update for job 6667435782 in state='finished'
[2025-06-04 20:04:03] 2025-06-05 00:03:38,971 | INFO     | this job has now completed (state=finished)
[2025-06-04 20:04:03] 2025-06-05 00:03:38,971 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 20:04:03] 2025-06-05 00:03:38,971 | INFO     | log transfer has been attempted: DONE
[2025-06-04 20:04:03] 2025-06-05 00:03:38,971 | INFO     | job 6667435782 has finished - writing final server update
[2025-06-04 20:04:03] 2025-06-05 00:03:38,972 | INFO     | total number of processed events: 400 (read)
[2025-06-04 20:04:03] 2025-06-05 00:03:38,973 | INFO     | executing command: lscpu
[2025-06-04 20:04:03] 2025-06-05 00:03:38,999 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 20:04:03] 2025-06-05 00:03:39,227 | INFO     | monitor loop #428: job 0:6667435782 is in state 'finished'
[2025-06-04 20:04:03] 2025-06-05 00:03:39,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:04:03] 2025-06-05 00:03:41,734 | INFO     | monitor loop #429: job 0:6667435782 is in state 'finished'
[2025-06-04 20:04:03] 2025-06-05 00:03:41,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:04:03] 2025-06-05 00:03:43,560 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 20:04:03] 2025-06-05 00:03:43,560 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667435782/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:04:03] 2025-06-05 00:03:43,561 | INFO     | extracted standard info from prmon json
[2025-06-04 20:04:03] 2025-06-05 00:03:43,562 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:04:03] 2025-06-05 00:03:43,562 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:04:03] 2025-06-05 00:03:43,562 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:04:03] 2025-06-05 00:03:43,562 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:04:03] 2025-06-05 00:03:43,565 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:04:03] 2025-06-05 00:03:43,565 | INFO     | sum of square deviations: 197203697.5
[2025-06-04 20:04:03] 2025-06-05 00:03:43,565 | INFO     | sum of deviations: -10597675454.499994
[2025-06-04 20:04:03] 2025-06-05 00:03:43,565 | INFO     | mean x: 1749079041.5
[2025-06-04 20:04:03] 2025-06-05 00:03:43,566 | INFO     | mean y: 2795805.38372093
[2025-06-04 20:04:03] 2025-06-05 00:03:43,566 | INFO     | -- intersect: 93997848946.23535
[2025-06-04 20:04:03] 2025-06-05 00:03:43,566 | INFO     | intersect: 93997848946.23535
[2025-06-04 20:04:03] 2025-06-05 00:03:43,566 | INFO     | chi2: 0.17056771924626937
[2025-06-04 20:04:03] 2025-06-05 00:03:43,566 | INFO     | -- intersect: 93997848946.23535
[2025-06-04 20:04:03] 2025-06-05 00:03:43,566 | INFO     | current memory leak: -53.74 B/s (using 86 data points, chi2=0.17)
[2025-06-04 20:04:03] 2025-06-05 00:03:43,567 | INFO     | ..............................
[2025-06-04 20:04:03] 2025-06-05 00:03:43,567 | INFO     | . Timing measurements:
[2025-06-04 20:04:03] 2025-06-05 00:03:43,567 | INFO     | . get job = 0 s
[2025-06-04 20:04:03] 2025-06-05 00:03:43,567 | INFO     | . initial setup = 2 s
[2025-06-04 20:04:03] 2025-06-05 00:03:43,567 | INFO     | . payload setup = 9 s
[2025-06-04 20:04:03] 2025-06-05 00:03:43,567 | INFO     | . stage-in = 0 s
[2025-06-04 20:04:03] 2025-06-05 00:03:43,567 | INFO     | . payload execution = 5669 s
[2025-06-04 20:04:03] 2025-06-05 00:03:43,567 | INFO     | . stage-out = 0 s
[2025-06-04 20:04:03] 2025-06-05 00:03:43,567 | INFO     | . log creation = 0 s
[2025-06-04 20:04:03] 2025-06-05 00:03:43,568 | INFO     | ..............................
[2025-06-04 20:04:03] 2025-06-05 00:03:43,808 | INFO     | 
[2025-06-04 20:04:03] 2025-06-05 00:03:43,808 | INFO     | job summary report
[2025-06-04 20:04:03] 2025-06-05 00:03:43,808 | INFO     | --------------------------------------------------
[2025-06-04 20:04:03] 2025-06-05 00:03:43,808 | INFO     | PanDA job id: 6667435782
[2025-06-04 20:04:03] 2025-06-05 00:03:43,809 | INFO     | task id: 44871837
[2025-06-04 20:04:03] 2025-06-05 00:03:43,809 | INFO     | errors: (none)
[2025-06-04 20:04:03] 2025-06-05 00:03:43,809 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:04:03] 2025-06-05 00:03:43,809 | INFO     | pilot state: finished 
[2025-06-04 20:04:03] 2025-06-05 00:03:43,809 | INFO     | transexitcode: 0
[2025-06-04 20:04:03] 2025-06-05 00:03:43,809 | INFO     | exeerrorcode: 0
[2025-06-04 20:04:03] 2025-06-05 00:03:43,810 | INFO     | exeerrordiag: 
[2025-06-04 20:04:03] 2025-06-05 00:03:43,810 | INFO     | exitcode: 0
[2025-06-04 20:04:03] 2025-06-05 00:03:43,810 | INFO     | exitmsg: OK
[2025-06-04 20:04:03] 2025-06-05 00:03:43,810 | INFO     | cpuconsumptiontime: 60821 s
[2025-06-04 20:04:03] 2025-06-05 00:03:43,810 | INFO     | nevents: 400
[2025-06-04 20:04:03] 2025-06-05 00:03:43,810 | INFO     | neventsw: 0
[2025-06-04 20:04:03] 2025-06-05 00:03:43,811 | INFO     | pid: 21859
[2025-06-04 20:04:03] 2025-06-05 00:03:43,811 | INFO     | pgrp: 21859
[2025-06-04 20:04:03] 2025-06-05 00:03:43,811 | INFO     | corecount: 12
[2025-06-04 20:04:03] 2025-06-05 00:03:43,811 | INFO     | event service: False
[2025-06-04 20:04:03] 2025-06-05 00:03:43,811 | INFO     | sizes: {0: 2396564, 1: 2397420, 6: 2397626, 12: 2397654, 5682: 2424127, 5683: 2424126, 5684: 2433251, 5687: 2433307, 5695: 2433477}
[2025-06-04 20:04:03] 2025-06-05 00:03:43,811 | INFO     | --------------------------------------------------
[2025-06-04 20:04:03] 2025-06-05 00:03:43,811 | INFO     | 
[2025-06-04 20:04:03] 2025-06-05 00:03:43,812 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 20:04:03] 2025-06-05 00:03:43,834 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,834 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,835 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,835 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,835 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,835 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,835 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,835 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,836 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,836 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,836 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,836 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,836 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,836 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,837 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,837 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,837 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:04:03] 2025-06-05 00:03:43,837 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,837 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:04:03] 2025-06-05 00:03:43,838 | INFO     | job 6667435782 has completed (purged errors)
[2025-06-04 20:04:03] 2025-06-05 00:03:43,838 | INFO     | overall cleanup function is called
[2025-06-04 20:04:03] 2025-06-05 00:03:44,846 | INFO     | --- collectZombieJob: --- 10, [21859]
[2025-06-04 20:04:03] 2025-06-05 00:03:44,846 | INFO     | zombie collector waiting for pid 21859
[2025-06-04 20:04:03] 2025-06-05 00:03:44,846 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:04:03] 2025-06-05 00:03:44,846 | INFO     | collected zombie processes
[2025-06-04 20:04:03] 2025-06-05 00:03:44,847 | INFO     | will attempt to kill all subprocesses of pid=21859
[2025-06-04 20:04:03] 2025-06-05 00:03:44,940 | INFO     | process IDs to be killed: [21859] (in reverse order)
[2025-06-04 20:04:03] 2025-06-05 00:03:44,993 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:04:03] 2025-06-05 00:03:44,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:04:03] 2025-06-05 00:03:44,996 | INFO     | did not find any defunct processes belonging to 21859
[2025-06-04 20:04:03] 2025-06-05 00:03:44,998 | INFO     | did not find any defunct processes belonging to 21859
[2025-06-04 20:04:03] 2025-06-05 00:03:44,998 | INFO     | ready for new job
[2025-06-04 20:04:03] 2025-06-05 00:03:44,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:04:03] 2025-06-05 00:03:45,000 | INFO     | **************************************
[2025-06-04 20:04:03] 2025-06-05 00:03:45,000 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:04:03] 2025-06-05 00:03:45,000 | INFO     | **************************************
[2025-06-04 20:04:03] 2025-06-05 00:03:45,000 | INFO     | 
[2025-06-04 20:04:03] 2025-06-05 00:03:45,001 | INFO     | architecture information:
[2025-06-04 20:04:03] 2025-06-05 00:03:45,001 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:04:03] 2025-06-05 00:03:45,015 | INFO     | cat /etc/os-release:
[2025-06-04 20:04:03] NAME="CentOS Linux"
[2025-06-04 20:04:03] VERSION="7 (Core)"
[2025-06-04 20:04:03] ID="centos"
[2025-06-04 20:04:03] ID_LIKE="rhel fedora"
[2025-06-04 20:04:03] VERSION_ID="7"
[2025-06-04 20:04:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:04:03] ANSI_COLOR="0;31"
[2025-06-04 20:04:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:04:03] HOME_URL="https://www.centos.org/"
[2025-06-04 20:04:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:04:03] 
[2025-06-04 20:04:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:04:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:04:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:04:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:04:03] 
[2025-06-04 20:04:03] 2025-06-05 00:03:45,015 | INFO     | **************************************
[2025-06-04 20:04:03] 2025-06-05 00:03:45,518 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 20:04:03] 2025-06-05 00:03:45,533 | INFO     | sufficient remaining disk space (29386342400 B)
[2025-06-04 20:04:03] 2025-06-05 00:03:45,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:04:03] 2025-06-05 00:03:45,534 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:04:03] 2025-06-05 00:03:45,534 | INFO     | update_server=False
[2025-06-04 20:04:03] 2025-06-05 00:03:45,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:04:03] 2025-06-05 00:03:45,534 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 20:04:03] 2025-06-05 00:03:45,534 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:04:03] 2025-06-05 00:03:45,535 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:04:03] 2025-06-05 00:03:45,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:04:03] 2025-06-05 00:03:45,535 | INFO     | aborting loop
[2025-06-04 20:04:03] 2025-06-05 00:03:45,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:04:03] 2025-06-05 00:03:45,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:04:03] 2025-06-05 00:03:45,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:04:03] 2025-06-05 00:03:45,655 | INFO     | all data control threads have been joined
[2025-06-04 20:04:03] 2025-06-05 00:03:45,762 | INFO     | all payload control threads have been joined
[2025-06-04 20:04:03] 2025-06-05 00:03:46,309 | INFO     | all job control threads have been joined
[2025-06-04 20:04:03] 2025-06-05 00:03:46,539 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:46,541 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:46,541 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:46,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:04:03] 2025-06-05 00:03:46,660 | INFO     | [data] control thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:46,768 | INFO     | [payload] control thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:46,881 | INFO     | [job] validate thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:46,891 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:46,916 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:46,933 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:47,315 | INFO     | [job] control thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:47,375 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:47,424 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:47,595 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:47,639 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:50,638 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:55,821 | INFO     | job.realtimelogging is not enabled
[2025-06-04 20:04:03] 2025-06-05 00:03:56,826 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:04:03] 2025-06-05 00:03:58,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662132623168)>', '<ExcThread(monitor, started 140661311399680)>']
[2025-06-04 20:04:03] 2025-06-05 00:03:58,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:04:03] 2025-06-05 00:03:58,599 | INFO     | [monitor] control thread has ended
[2025-06-04 20:04:03] 2025-06-05 00:04:03,605 | INFO     | all workflow threads have been joined
[2025-06-04 20:04:03] 2025-06-05 00:04:03,606 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:04:03] 2025-06-05 00:04:03,606 | INFO     | traces error code: 0
[2025-06-04 20:04:03] 2025-06-05 00:04:03,607 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:04:03] 2025-06-05 00:04:03,699 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:04:03] 2025-06-05 00:04:03,702 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:04:03] 2025-06-05 00:04:03,706 [wrapper] pilotpid: 15312
[2025-06-04 20:04:03] 2025-06-05 00:04:03,709 [wrapper] Pilot exit status: 0
[2025-06-04 20:04:03] 2025-06-05 00:04:03,724 [wrapper] pandaids: 6667435782
[2025-06-04 20:04:03] 2025-06-05 00:04:03,766 [wrapper] cleanup supervisor_pilot 10605 15313
[2025-06-04 20:04:03] 2025-06-05 00:04:03,770 [wrapper] Test setup, not cleaning
[2025-06-04 20:04:03] 2025-06-05 00:04:03,773 [wrapper] apfmon messages muted
[2025-06-04 20:04:03] 2025-06-05 00:04:03,777 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:04:03] 2025-06-05 00:04:03,781 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:04:03]  *** Error codes and diagnostics ***
[2025-06-04 20:04:03]     "exeErrorCode": 0,
[2025-06-04 20:04:03]     "exeErrorDiag": "",
[2025-06-04 20:04:03]     "pilotErrorCode": 0,
[2025-06-04 20:04:03]     "pilotErrorDiag": "",
[2025-06-04 20:04:03]  *** Listing of results directory ***
[2025-06-04 20:04:03] total 416140
[2025-06-04 20:04:03] -rw-r--r-- 1 boincer umatlas    495897 May 27 15:34 pilot3.tar.gz
[2025-06-04 20:04:03] -rw-r--r-- 1 boincer umatlas      5111 May 27 15:35 queuedata.json
[2025-06-04 20:04:03] -rwx------ 1 boincer umatlas     37140 May 27 15:37 runpilot2-wrapper.sh
[2025-06-04 20:04:03] -rw-r--r-- 1 boincer umatlas       100 Jun  4 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:04:03] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 18:28 run_atlas
[2025-06-04 20:04:03] -rw-r--r-- 1 boincer umatlas       105 Jun  4 18:28 job.xml
[2025-06-04 20:04:03] -rw-r--r-- 2 boincer umatlas 221206645 Jun  4 18:28 EVNT.44871834._002844.pool.root.1
[2025-06-04 20:04:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 18:28 start_atlas.sh
[2025-06-04 20:04:03] drwxrwx--x 2 boincer umatlas      4096 Jun  4 18:28 shared
[2025-06-04 20:04:03] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 18:28 input.tar.gz
[2025-06-04 20:04:03] -rw-r--r-- 1 boincer umatlas         0 Jun  4 18:28 boinc_lockfile
[2025-06-04 20:04:03] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 18:28 pandaJob.out
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas    987032 Jun  4 18:28 agis_schedconf.cvmfs.json
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas   1598969 Jun  4 18:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:04:03] drwx------ 4 boincer umatlas      4096 Jun  4 18:28 pilot3
[2025-06-04 20:04:03] -rw-r--r-- 1 boincer umatlas      5867 Jun  4 20:00 init_data.xml
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas        95 Jun  4 20:02 pilot_heartbeat.json
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas 199294658 Jun  4 20:03 HITS.44871837._072441.pool.root.1
[2025-06-04 20:04:03] -rw-r--r-- 1 boincer umatlas       529 Jun  4 20:03 boinc_task_state.xml
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas      1060 Jun  4 20:03 memory_monitor_summary.json
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas    368344 Jun  4 20:03 log.44871837._072441.job.log.tgz.1
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas      7750 Jun  4 20:03 heartbeat.json
[2025-06-04 20:04:03] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 20:03 boinc_mmap_file
[2025-06-04 20:04:03] -rw-r--r-- 1 boincer umatlas        27 Jun  4 20:03 wrapper_checkpoint.txt
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas      4548 Jun  4 20:04 pilotlog.txt
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas    534889 Jun  4 20:04 log.44871837._072441.job.log.1
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas       357 Jun  4 20:04 output.list
[2025-06-04 20:04:03] -rw-r--r-- 1 boincer umatlas       620 Jun  4 20:04 runtime_log
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas    921600 Jun  4 20:04 result.tar.gz
[2025-06-04 20:04:03] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 20:04 runtime_log.err
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas       659 Jun  4 20:04 qYENDmuHFe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsEaKDmyzHejm.diag
[2025-06-04 20:04:03] -rw-r--r-- 1 boincer umatlas     21685 Jun  4 20:04 stderr.txt
[2025-06-04 20:04:03] HITS file was successfully produced:
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas 199294658 Jun  4 20:03 shared/HITS.pool.root.1
[2025-06-04 20:04:03]  *** Contents of shared directory: ***
[2025-06-04 20:04:03] total 412064
[2025-06-04 20:04:03] -rw-r--r-- 2 boincer umatlas 221206645 Jun  4 18:28 ATLAS.root_0
[2025-06-04 20:04:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 18:28 start_atlas.sh
[2025-06-04 20:04:03] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 18:28 input.tar.gz
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas 199294658 Jun  4 20:03 HITS.pool.root.1
[2025-06-04 20:04:03] -rw------- 1 boincer umatlas    921600 Jun  4 20:04 result.tar.gz
20:04:05 (11717): run_atlas exited; CPU time 60798.152668
20:04:05 (11717): called boinc_finish(0)

</stderr_txt>
]]>

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