Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:23:09 (852714): wrapper (7.7.26015): starting
01:23:09 (852714): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 01:23:09] Arguments: --nthreads 3
[2025-06-05 01:23:09] Threads: 3
[2025-06-05 01:23:09] Checking for CVMFS
[2025-06-05 01:23:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:23:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:23:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:23:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:23:09] 2.9.2.0 9871 2535 82892 146798 1 56 24821189 36864000 0 130560 0 2273308 99.993 544098 9711 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 01:23:09] CVMFS is ok
[2025-06-05 01:23:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:23:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:23:09] Further information can be found at the LHC@home message board.
[2025-06-05 01:23:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:23:09] Checking for apptainer binary...
[2025-06-05 01:23:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:23:09] Running /usr/bin/apptainer --version
[2025-06-05 01:23:09] apptainer version 1.3.6-6.1
[2025-06-05 01:23:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:23:09] atlasA091
[2025-06-05 01:23:09] apptainer works
[2025-06-05 01:23:09] Set ATHENA_PROC_NUMBER=3
[2025-06-05 01:23:09] Set ATHENA_CORE_NUMBER=3
[2025-06-05 01:23:09] Starting ATLAS job with PandaID=6680097709
[2025-06-05 01:23:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:39:31]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:39:31]  guid=6c92c47c-e639-48c4-8edb-2b3a880a0b31
[2025-06-05 02:39:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 02:39:31]  is_altstaged=None
[2025-06-05 02:39:31]  is_tar=False
[2025-06-05 02:39:31]  lfn=log.45006595._056960.job.log.tgz.1
[2025-06-05 02:39:31]  mtime=0
[2025-06-05 02:39:31]  protocol_id=None
[2025-06-05 02:39:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 02:39:31]  replicas=None
[2025-06-05 02:39:31]  scope=mc23_13p6TeV
[2025-06-05 02:39:31]  status=None
[2025-06-05 02:39:31]  status_code=0
[2025-06-05 02:39:31]  storage_token=
[2025-06-05 02:39:31]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6680097709/log.45006595._056960.job.log.tgz.1
[2025-06-05 02:39:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/c8/log.45006595._056960.job.log.tgz.1
[2025-06-05 02:39:31]  workdir=None
[2025-06-05 02:39:31] ]
[2025-06-05 02:39:31] 2025-06-05 00:39:14,629 | INFO     | transferring file log.45006595._056960.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6680097709/log.45006595._056960.job.log.tgz.1 to /local/data/boinc/
[2025-06-05 02:39:31] 2025-06-05 00:39:14,629 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6680097709/log.45006595._056960.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0569
[2025-06-05 02:39:31] 2025-06-05 00:39:14,643 | INFO     | adding to output.list: log.45006595._056960.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/c8/log.45006595._056960.job.log.tg
[2025-06-05 02:39:31] 2025-06-05 00:39:14,644 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 02:39:31] 2025-06-05 00:39:14,644 | INFO     | summary of transferred files:
[2025-06-05 02:39:31] 2025-06-05 00:39:14,644 | INFO     |  -- lfn=log.45006595._056960.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 02:39:31] 2025-06-05 00:39:14,644 | INFO     | stage-out finished correctly
[2025-06-05 02:39:31] 2025-06-05 00:39:14,674 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 02:39:31] 2025-06-05 00:39:15,183 | INFO     | job 6680097709 has state=finished
[2025-06-05 02:39:31] 2025-06-05 00:39:15,183 | INFO     | preparing for final server update for job 6680097709 in state='finished'
[2025-06-05 02:39:31] 2025-06-05 00:39:15,184 | INFO     | this job has now completed (state=finished)
[2025-06-05 02:39:31] 2025-06-05 00:39:15,184 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 02:39:31] 2025-06-05 00:39:15,184 | INFO     | log transfer has been attempted: DONE
[2025-06-05 02:39:31] 2025-06-05 00:39:15,184 | INFO     | job 6680097709 has finished - writing final server update
[2025-06-05 02:39:31] 2025-06-05 00:39:15,184 | INFO     | total number of processed events: 400 (read)
[2025-06-05 02:39:31] 2025-06-05 00:39:15,185 | INFO     | executing command: lscpu
[2025-06-05 02:39:31] 2025-06-05 00:39:15,201 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 02:39:31] 2025-06-05 00:39:16,104 | WARNING  | process 862849 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 02:39:31] 2025-06-05 00:39:16,104 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6680097709/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:39:31] 2025-06-05 00:39:16,155 | INFO     | number of running child processes to parent process 862849: 1
[2025-06-05 02:39:31] 2025-06-05 00:39:16,155 | INFO     | maximum number of monitored processes: 6
[2025-06-05 02:39:31] 2025-06-05 00:39:18,658 | INFO     | monitor loop #352: job 0:6680097709 is in state 'finished'
[2025-06-05 02:39:31] 2025-06-05 00:39:18,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:39:31] 2025-06-05 00:39:18,805 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 02:39:31] 2025-06-05 00:39:18,805 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6680097709/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:39:31] 2025-06-05 00:39:18,805 | INFO     | extracted standard info from prmon json
[2025-06-05 02:39:31] 2025-06-05 00:39:18,806 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:39:31] 2025-06-05 00:39:18,806 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:39:31] 2025-06-05 00:39:18,806 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:39:31] 2025-06-05 00:39:18,806 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:39:31] 2025-06-05 00:39:18,806 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:39:31] 2025-06-05 00:39:18,806 | INFO     | sum of square deviations: 97479037.0
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | sum of deviations: -9005487492.5
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | mean x: 1749081764.5
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | mean y: 2533587.367647059
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | -- intersect: 161589418709.80252
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | intersect: 161589418709.80252
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | chi2: 0.0418736705253452
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | -- intersect: 161589418709.80252
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | current memory leak: -92.38 B/s (using 68 data points, chi2=0.04)
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | ..............................
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | . Timing measurements:
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | . get job = 0 s
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | . initial setup = 1 s
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | . payload setup = 3 s
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | . stage-in = 0 s
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | . payload execution = 4538 s
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | . stage-out = 0 s
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | . log creation = 0 s
[2025-06-05 02:39:31] 2025-06-05 00:39:18,807 | INFO     | ..............................
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | 
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | job summary report
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | --------------------------------------------------
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | PanDA job id: 6680097709
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | task id: 45006595
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | errors: (none)
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | pilot state: finished 
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | transexitcode: 0
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | exeerrorcode: 0
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | exeerrordiag: 
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | exitcode: 0
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | exitmsg: OK
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | cpuconsumptiontime: 13009 s
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | nevents: 400
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | neventsw: 0
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | pid: 862849
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | pgrp: 862849
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | corecount: 3
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | event service: False
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | sizes: {0: 2397294, 2: 2397500, 10: 2397528, 4545: 2423689, 4546: 2432692, 4550: 2432806}
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | --------------------------------------------------
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | 
[2025-06-05 02:39:31] 2025-06-05 00:39:18,839 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 02:39:31] 2025-06-05 00:39:18,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,853 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,853 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,853 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | job 6680097709 has completed (purged errors)
[2025-06-05 02:39:31] 2025-06-05 00:39:18,854 | INFO     | overall cleanup function is called
[2025-06-05 02:39:31] 2025-06-05 00:39:19,861 | INFO     | --- collectZombieJob: --- 10, [862849]
[2025-06-05 02:39:31] 2025-06-05 00:39:19,861 | INFO     | zombie collector waiting for pid 862849
[2025-06-05 02:39:31] 2025-06-05 00:39:19,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:39:31] 2025-06-05 00:39:19,861 | INFO     | collected zombie processes
[2025-06-05 02:39:31] 2025-06-05 00:39:19,861 | INFO     | will attempt to kill all subprocesses of pid=862849
[2025-06-05 02:39:31] 2025-06-05 00:39:19,901 | INFO     | process IDs to be killed: [862849] (in reverse order)
[2025-06-05 02:39:31] 2025-06-05 00:39:19,926 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:39:31] 2025-06-05 00:39:19,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:39:31] 2025-06-05 00:39:19,927 | INFO     | did not find any defunct processes belonging to 862849
[2025-06-05 02:39:31] 2025-06-05 00:39:19,928 | INFO     | did not find any defunct processes belonging to 862849
[2025-06-05 02:39:31] 2025-06-05 00:39:19,928 | INFO     | ready for new job
[2025-06-05 02:39:31] 2025-06-05 00:39:19,928 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:39:31] 2025-06-05 00:39:19,929 | INFO     | **************************************
[2025-06-05 02:39:31] 2025-06-05 00:39:19,929 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:39:31] 2025-06-05 00:39:19,929 | INFO     | **************************************
[2025-06-05 02:39:31] 2025-06-05 00:39:19,929 | INFO     | 
[2025-06-05 02:39:31] 2025-06-05 00:39:19,930 | INFO     | architecture information:
[2025-06-05 02:39:31] 2025-06-05 00:39:19,930 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:39:31] 2025-06-05 00:39:19,939 | INFO     | cat /etc/os-release:
[2025-06-05 02:39:31] NAME="CentOS Linux"
[2025-06-05 02:39:31] VERSION="7 (Core)"
[2025-06-05 02:39:31] ID="centos"
[2025-06-05 02:39:31] ID_LIKE="rhel fedora"
[2025-06-05 02:39:31] VERSION_ID="7"
[2025-06-05 02:39:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:39:31] ANSI_COLOR="0;31"
[2025-06-05 02:39:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:39:31] HOME_URL="https://www.centos.org/"
[2025-06-05 02:39:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:39:31] 
[2025-06-05 02:39:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:39:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:39:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:39:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:39:31] 
[2025-06-05 02:39:31] 2025-06-05 00:39:19,939 | INFO     | **************************************
[2025-06-05 02:39:31] 2025-06-05 00:39:20,442 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 02:39:31] 2025-06-05 00:39:20,456 | INFO     | sufficient remaining disk space (377373065216 B)
[2025-06-05 02:39:31] 2025-06-05 00:39:20,456 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:39:31] 2025-06-05 00:39:20,456 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:39:31] 2025-06-05 00:39:20,456 | INFO     | update_server=False
[2025-06-05 02:39:31] 2025-06-05 00:39:20,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:39:31] 2025-06-05 00:39:20,457 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 02:39:31] 2025-06-05 00:39:20,457 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:39:31] 2025-06-05 00:39:20,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:39:31] 2025-06-05 00:39:20,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:39:31] 2025-06-05 00:39:20,457 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:39:31] 2025-06-05 00:39:20,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:39:31] 2025-06-05 00:39:20,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:39:31] 2025-06-05 00:39:20,457 | INFO     | aborting loop
[2025-06-05 02:39:31] 2025-06-05 00:39:20,558 | INFO     | all job control threads have been joined
[2025-06-05 02:39:31] 2025-06-05 00:39:20,706 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:39:31] 2025-06-05 00:39:21,176 | INFO     | all data control threads have been joined
[2025-06-05 02:39:31] 2025-06-05 00:39:21,462 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:21,463 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:21,463 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:21,563 | INFO     | [job] control thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:21,607 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:21,658 | INFO     | all payload control threads have been joined
[2025-06-05 02:39:31] 2025-06-05 00:39:21,775 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:22,182 | INFO     | [data] control thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:22,463 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:22,551 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:22,574 | INFO     | [job] validate thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:22,615 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:22,664 | INFO     | [payload] control thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:22,711 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:22,828 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:22,836 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:24,713 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:39:31] 2025-06-05 00:39:26,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140553911383872)>', '<ExcThread(monitor, started 140552670541568)>']
[2025-06-05 02:39:31] 2025-06-05 00:39:26,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:39:31] 2025-06-05 00:39:26,490 | INFO     | [monitor] control thread has ended
[2025-06-05 02:39:31] 2025-06-05 00:39:31,044 | INFO     | all workflow threads have been joined
[2025-06-05 02:39:31] 2025-06-05 00:39:31,045 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:39:31] 2025-06-05 00:39:31,045 | INFO     | traces error code: 0
[2025-06-05 02:39:31] 2025-06-05 00:39:31,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:39:31] 2025-06-05 00:39:31,094 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:39:31] 2025-06-05 00:39:31,097 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:39:31] 2025-06-05 00:39:31,099 [wrapper] pilotpid: 856353
[2025-06-05 02:39:31] 2025-06-05 00:39:31,101 [wrapper] Pilot exit status: 0
[2025-06-05 02:39:31] 2025-06-05 00:39:31,109 [wrapper] pandaids: 6680097709
[2025-06-05 02:39:31] 2025-06-05 00:39:31,125 [wrapper] cleanup supervisor_pilot  874846 856354
[2025-06-05 02:39:31] 2025-06-05 00:39:31,128 [wrapper] Test setup, not cleaning
[2025-06-05 02:39:31] 2025-06-05 00:39:31,131 [wrapper] apfmon messages muted
[2025-06-05 02:39:31] 2025-06-05 00:39:31,133 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:39:31] 2025-06-05 00:39:31,136 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:39:31]  *** Error codes and diagnostics ***
[2025-06-05 02:39:31]     "exeErrorCode": 0,
[2025-06-05 02:39:31]     "exeErrorDiag": "",
[2025-06-05 02:39:31]     "pilotErrorCode": 0,
[2025-06-05 02:39:31]     "pilotErrorDiag": "",
[2025-06-05 02:39:31]  *** Listing of results directory ***
[2025-06-05 02:39:31] total 396940
[2025-06-05 02:39:31] -rw-r--r-- 1 boinc boinc    495897 Jun  5 00:14 pilot3.tar.gz
[2025-06-05 02:39:31] -rwx------ 1 boinc boinc     37140 Jun  5 00:24 runpilot2-wrapper.sh
[2025-06-05 02:39:31] -rw-r--r-- 1 boinc boinc      5111 Jun  5 00:24 queuedata.json
[2025-06-05 02:39:31] -rw-r--r-- 1 boinc boinc       100 Jun  5 01:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:39:31] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 01:23 run_atlas
[2025-06-05 02:39:31] -rw-r--r-- 1 boinc boinc       105 Jun  5 01:23 job.xml
[2025-06-05 02:39:31] -rw-r--r-- 2 boinc boinc 216617132 Jun  5 01:23 EVNT.45006593._001878.pool.root.1
[2025-06-05 02:39:31] -rw-r--r-- 1 boinc boinc      6927 Jun  5 01:23 init_data.xml
[2025-06-05 02:39:31] drwxrwx--x 2 boinc boinc      4096 Jun  5 01:23 shared
[2025-06-05 02:39:31] -rw-r--r-- 2 boinc boinc    508884 Jun  5 01:23 input.tar.gz
[2025-06-05 02:39:31] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:23 start_atlas.sh
[2025-06-05 02:39:31] -rw-r--r-- 1 boinc boinc         0 Jun  5 01:23 boinc_lockfile
[2025-06-05 02:39:31] -rw-r--r-- 1 boinc boinc      2524 Jun  5 01:23 pandaJob.out
[2025-06-05 02:39:31] -rw------- 1 boinc boinc    987117 Jun  5 01:23 agis_schedconf.cvmfs.json
[2025-06-05 02:39:31] -rw------- 1 boinc boinc   1598969 Jun  5 01:23 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:39:31] drwx------ 4 boinc boinc      4096 Jun  5 01:23 pilot3
[2025-06-05 02:39:31] -rw------- 1 boinc boinc        95 Jun  5 02:38 pilot_heartbeat.json
[2025-06-05 02:39:31] -rw------- 1 boinc boinc 184673709 Jun  5 02:38 HITS.45006595._056960.pool.root.1
[2025-06-05 02:39:31] -rw-r--r-- 1 boinc boinc       529 Jun  5 02:39 boinc_task_state.xml
[2025-06-05 02:39:31] -rw------- 1 boinc boinc      1016 Jun  5 02:39 memory_monitor_summary.json
[2025-06-05 02:39:31] -rw------- 1 boinc boinc    225591 Jun  5 02:39 log.45006595._056960.job.log.tgz.1
[2025-06-05 02:39:31] -rw------- 1 boinc boinc      7655 Jun  5 02:39 heartbeat.json
[2025-06-05 02:39:31] -rw-r--r-- 1 boinc boinc      8192 Jun  5 02:39 boinc_mmap_file
[2025-06-05 02:39:31] -rw-r--r-- 1 boinc boinc        27 Jun  5 02:39 wrapper_checkpoint.txt
[2025-06-05 02:39:31] -rw------- 1 boinc boinc      4480 Jun  5 02:39 pilotlog.txt
[2025-06-05 02:39:31] -rw------- 1 boinc boinc    446117 Jun  5 02:39 log.45006595._056960.job.log.1
[2025-06-05 02:39:31] -rw------- 1 boinc boinc       357 Jun  5 02:39 output.list
[2025-06-05 02:39:31] -rw-r--r-- 1 boinc boinc       620 Jun  5 02:39 runtime_log
[2025-06-05 02:39:31] -rw------- 1 boinc boinc    686080 Jun  5 02:39 result.tar.gz
[2025-06-05 02:39:31] -rw-r--r-- 1 boinc boinc      8748 Jun  5 02:39 runtime_log.err
[2025-06-05 02:39:31] -rw------- 1 boinc boinc       661 Jun  5 02:39 PIcNDm8hBh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT3nKDmFwQvdm.diag
[2025-06-05 02:39:31] -rw-r--r-- 1 boinc boinc     21292 Jun  5 02:39 stderr.txt
[2025-06-05 02:39:31] HITS file was successfully produced:
[2025-06-05 02:39:31] -rw------- 1 boinc boinc 184673709 Jun  5 02:38 shared/HITS.pool.root.1
[2025-06-05 02:39:31]  *** Contents of shared directory: ***
[2025-06-05 02:39:31] total 393088
[2025-06-05 02:39:31] -rw-r--r-- 2 boinc boinc 216617132 Jun  5 01:23 ATLAS.root_0
[2025-06-05 02:39:31] -rw-r--r-- 2 boinc boinc    508884 Jun  5 01:23 input.tar.gz
[2025-06-05 02:39:31] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:23 start_atlas.sh
[2025-06-05 02:39:31] -rw------- 1 boinc boinc 184673709 Jun  5 02:38 HITS.pool.root.1
[2025-06-05 02:39:31] -rw------- 1 boinc boinc    686080 Jun  5 02:39 result.tar.gz
02:39:32 (852714): run_atlas exited; CPU time 13021.371858
02:39:32 (852714): called boinc_finish(0)

</stderr_txt>
]]>

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