Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
11:08:04 (789672): wrapper (7.7.26015): starting
11:08:04 (789672): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 11:08:04] Arguments: --nthreads 4
[2025-06-05 11:08:04] Threads: 4
[2025-06-05 11:08:04] Checking for CVMFS
[2025-06-05 11:08:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 11:08:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 11:08:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 11:08:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 11:08:04] 2.13.0.0 3048 2216 50728 146812 4 56 7041782 10240000 3674 130560 1 2108015 95.636 10394431 274 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 11:08:04] CVMFS is ok
[2025-06-05 11:08:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 11:08:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 11:08:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 11:08:04] Further information can be found at the LHC@home message board.
[2025-06-05 11:08:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:08:04] Checking for apptainer binary...
[2025-06-05 11:08:04] apptainer is not installed, using version from CVMFS
[2025-06-05 11:08:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:08:16] Ryze
[2025-06-05 11:08:16] apptainer works
[2025-06-05 11:08:16] Set ATHENA_PROC_NUMBER=4
[2025-06-05 11:08:16] Set ATHENA_CORE_NUMBER=4
[2025-06-05 11:08:16] Starting ATLAS job with PandaID=6668443595
[2025-06-05 11:08:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:02:36]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:02:36] 2025-06-05 11:02:17,958 | INFO     | -- intersect: -82091659140.84465
[2025-06-05 13:02:36] 2025-06-05 11:02:17,958 | INFO     | intersect: -82091659140.84465
[2025-06-05 13:02:36] 2025-06-05 11:02:17,958 | INFO     | chi2: 0.44059017074943047
[2025-06-05 13:02:36] 2025-06-05 11:02:17,958 | INFO     | current chi2=0.44059017074943047 (change=80.05208456386494 %)
[2025-06-05 13:02:36] 2025-06-05 11:02:17,958 | INFO     | sum of square deviations: 257521107.5
[2025-06-05 13:02:36] 2025-06-05 11:02:17,958 | INFO     | sum of deviations: 6830938508.499999
[2025-06-05 13:02:36] 2025-06-05 11:02:17,958 | INFO     | mean x: 1749118459.5
[2025-06-05 13:02:36] 2025-06-05 11:02:17,958 | INFO     | mean y: 2329412.840425532
[2025-06-05 13:02:36] 2025-06-05 11:02:17,958 | INFO     | -- intersect: -46394335920.41481
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | intersect: -46394335920.41481
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | chi2: 0.24983194480735324
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | current chi2=0.24983194480735324 (change=43.296069364780266 %)
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | sum of square deviations: 218571540.0
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | sum of deviations: 1533647176.999999
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | mean x: 1749118612.0
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | mean y: 2350169.3146067415
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | -- intersect: -12270660404.394836
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | intersect: -12270660404.394836
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | chi2: 0.13725583955463172
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | current chi2=0.13725583955463172 (change=45.06073286165609 %)
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | sum of square deviations: 183761585.0
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | sum of deviations: -3032946474.0000005
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | mean x: 1749118764.5
[2025-06-05 13:02:36] 2025-06-05 11:02:17,959 | INFO     | mean y: 2370071.476190476
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | -- intersect: 28871208949.838676
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | intersect: 28871208949.838676
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | chi2: 0.013686991971331806
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | current chi2=0.013686991971331806 (change=90.02811682494281 %)
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | sum of square deviations: 152858680.0
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | sum of deviations: -3212992975.9999995
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | mean x: 1749118917.0
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | mean y: 2370916.7974683545
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | -- intersect: 36767746586.074
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | intersect: 36767746586.074
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | chi2: 0.010081013471051866
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | current chi2=0.010081013471051866 (change=26.346026269562152 %)
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | sum of square deviations: 125630262.5
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | sum of deviations: -2935495893.5
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | mean x: 1749119069.5
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | mean y: 2369349.878378378
[2025-06-05 13:02:36] 2025-06-05 11:02:17,960 | INFO     | -- intersect: 40872552565.1669
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | intersect: 40872552565.1669
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | chi2: 0.009384788653615158
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | current chi2=0.009384788653615158 (change=6.906297858205941 %)
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | left removable region: 70
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | sum of square deviations: 11133232.0
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | sum of deviations: 130783573.0
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | mean x: 1749119954.0
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | mean y: 2332306.272727273
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | -- intersect: -20544814936.299385
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | intersect: -20544814936.299385
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | chi2: 3.2099864615596836e-05
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | -- intersect: -20544814936.299385
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | current memory leak: 11.75 B/s (using 33 data points, chi2=0.00)
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | ..............................
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | . Timing measurements:
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | . get job = 0 s
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | . initial setup = 44 s
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | . payload setup = 83 s
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | . stage-in = 0 s
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | . payload execution = 6621 s
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | . stage-out = 0 s
[2025-06-05 13:02:36] 2025-06-05 11:02:17,961 | INFO     | . log creation = 0 s
[2025-06-05 13:02:36] 2025-06-05 11:02:17,962 | INFO     | ..............................
[2025-06-05 13:02:36] 2025-06-05 11:02:18,005 | INFO     | 
[2025-06-05 13:02:36] 2025-06-05 11:02:18,005 | INFO     | job summary report
[2025-06-05 13:02:36] 2025-06-05 11:02:18,005 | INFO     | --------------------------------------------------
[2025-06-05 13:02:36] 2025-06-05 11:02:18,005 | INFO     | PanDA job id: 6668443595
[2025-06-05 13:02:36] 2025-06-05 11:02:18,005 | INFO     | task id: 44871837
[2025-06-05 13:02:36] 2025-06-05 11:02:18,005 | INFO     | errors: (none)
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | pilot state: finished 
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | transexitcode: 0
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | exeerrorcode: 0
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | exeerrordiag: 
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | exitcode: 0
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | exitmsg: OK
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | cpuconsumptiontime: 20551 s
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | nevents: 400
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | neventsw: 0
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | pid: 812513
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | pgrp: 812513
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | corecount: 4
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | event service: False
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | sizes: {0: 2397172, 1: 2397427, 5: 2397633, 12: 2397689, 6707: 2424699, 6708: 2433654, 6709: 2433838, 6718: 2434008}
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | --------------------------------------------------
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | 
[2025-06-05 13:02:36] 2025-06-05 11:02:18,006 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-06-05 13:02:36] 2025-06-05 11:02:18,017 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | job 6668443595 has completed (purged errors)
[2025-06-05 13:02:36] 2025-06-05 11:02:18,018 | INFO     | overall cleanup function is called
[2025-06-05 13:02:36] 2025-06-05 11:02:19,025 | INFO     | --- collectZombieJob: --- 10, [812513]
[2025-06-05 13:02:36] 2025-06-05 11:02:19,025 | INFO     | zombie collector waiting for pid 812513
[2025-06-05 13:02:36] 2025-06-05 11:02:19,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:02:36] 2025-06-05 11:02:19,025 | INFO     | collected zombie processes
[2025-06-05 13:02:36] 2025-06-05 11:02:19,025 | INFO     | will attempt to kill all subprocesses of pid=812513
[2025-06-05 13:02:36] 2025-06-05 11:02:19,093 | INFO     | process IDs to be killed: [812513] (in reverse order)
[2025-06-05 13:02:36] 2025-06-05 11:02:19,122 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:02:36] 2025-06-05 11:02:19,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:02:36] 2025-06-05 11:02:19,124 | INFO     | did not find any defunct processes belonging to 812513
[2025-06-05 13:02:36] 2025-06-05 11:02:19,126 | INFO     | did not find any defunct processes belonging to 812513
[2025-06-05 13:02:36] 2025-06-05 11:02:19,126 | INFO     | ready for new job
[2025-06-05 13:02:36] 2025-06-05 11:02:19,126 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:02:36] 2025-06-05 11:02:19,127 | INFO     | **************************************
[2025-06-05 13:02:36] 2025-06-05 11:02:19,127 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:02:36] 2025-06-05 11:02:19,127 | INFO     | **************************************
[2025-06-05 13:02:36] 2025-06-05 11:02:19,127 | INFO     | 
[2025-06-05 13:02:36] 2025-06-05 11:02:19,128 | INFO     | architecture information:
[2025-06-05 13:02:36] 2025-06-05 11:02:19,128 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:02:36] 2025-06-05 11:02:19,136 | INFO     | cat /etc/os-release:
[2025-06-05 13:02:36] NAME="CentOS Linux"
[2025-06-05 13:02:36] VERSION="7 (Core)"
[2025-06-05 13:02:36] ID="centos"
[2025-06-05 13:02:36] ID_LIKE="rhel fedora"
[2025-06-05 13:02:36] VERSION_ID="7"
[2025-06-05 13:02:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:02:36] ANSI_COLOR="0;31"
[2025-06-05 13:02:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:02:36] HOME_URL="https://www.centos.org/"
[2025-06-05 13:02:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:02:36] 
[2025-06-05 13:02:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:02:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:02:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:02:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:02:36] 
[2025-06-05 13:02:36] 2025-06-05 11:02:19,136 | INFO     | **************************************
[2025-06-05 13:02:36] 2025-06-05 11:02:19,639 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-06-05 13:02:36] 2025-06-05 11:02:19,649 | INFO     | sufficient remaining disk space (809285713920 B)
[2025-06-05 13:02:36] 2025-06-05 11:02:19,649 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:02:36] 2025-06-05 11:02:19,649 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:02:36] 2025-06-05 11:02:19,649 | INFO     | update_server=False
[2025-06-05 13:02:36] 2025-06-05 11:02:19,649 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:02:36] 2025-06-05 11:02:19,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:02:36] 2025-06-05 11:02:19,649 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 13:02:36] 2025-06-05 11:02:19,649 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:02:36] 2025-06-05 11:02:19,650 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:02:36] 2025-06-05 11:02:19,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:02:36] 2025-06-05 11:02:19,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:02:36] 2025-06-05 11:02:19,940 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 13:02:36] 2025-06-05 11:02:19,941 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 13:02:36] 2025-06-05 11:02:19,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:02:36] 2025-06-05 11:02:19,941 | INFO     | will abort loop
[2025-06-05 13:02:36] 2025-06-05 11:02:19,958 | INFO     | all job control threads have been joined
[2025-06-05 13:02:36] 2025-06-05 11:02:20,450 | INFO     | all data control threads have been joined
[2025-06-05 13:02:36] 2025-06-05 11:02:20,654 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:20,655 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:20,946 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:20,964 | INFO     | [job] control thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:20,991 | INFO     | all payload control threads have been joined
[2025-06-05 13:02:36] 2025-06-05 11:02:21,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:02:36] 2025-06-05 11:02:21,456 | INFO     | [data] control thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:21,465 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:21,659 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:21,673 | INFO     | [job] validate thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:21,830 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:21,952 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:21,978 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:21,997 | INFO     | [payload] control thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:22,123 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:23,050 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:23,654 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:29,741 | INFO     | job.realtimelogging is not enabled
[2025-06-05 13:02:36] 2025-06-05 11:02:30,746 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:02:36] 2025-06-05 11:02:31,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126001471661888)>', '<ExcThread(monitor, started 126000566359808)>']
[2025-06-05 13:02:36] 2025-06-05 11:02:32,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:02:36] 2025-06-05 11:02:32,707 | INFO     | [monitor] control thread has ended
[2025-06-05 13:02:36] 2025-06-05 11:02:36,877 | INFO     | all workflow threads have been joined
[2025-06-05 13:02:36] 2025-06-05 11:02:36,878 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:02:36] 2025-06-05 11:02:36,878 | INFO     | traces error code: 0
[2025-06-05 13:02:36] 2025-06-05 11:02:36,878 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:02:36] 2025-06-05 11:02:36,930 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:02:36] 2025-06-05 11:02:36,932 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:02:36] 2025-06-05 11:02:36,933 [wrapper] pilotpid: 793418
[2025-06-05 13:02:36] 2025-06-05 11:02:36,934 [wrapper] Pilot exit status: 0
[2025-06-05 13:02:36] 2025-06-05 11:02:36,939 [wrapper] pandaids: 6668443595
[2025-06-05 13:02:36] 2025-06-05 11:02:36,959 [wrapper] cleanup supervisor_pilot  875343 793419
[2025-06-05 13:02:36] 2025-06-05 11:02:36,960 [wrapper] Test setup, not cleaning
[2025-06-05 13:02:36] 2025-06-05 11:02:36,961 [wrapper] apfmon messages muted
[2025-06-05 13:02:36] 2025-06-05 11:02:36,963 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:02:36] 2025-06-05 11:02:36,964 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:02:36]  *** Error codes and diagnostics ***
[2025-06-05 13:02:36]     "exeErrorCode": 0,
[2025-06-05 13:02:36]     "exeErrorDiag": "",
[2025-06-05 13:02:36]     "pilotErrorCode": 0,
[2025-06-05 13:02:36]     "pilotErrorDiag": "",
[2025-06-05 13:02:36]  *** Listing of results directory ***
[2025-06-05 13:02:36] insgesamt 410028
[2025-06-05 13:02:36] -rw-r--r-- 1 boinc boinc      5111 Mai 28 15:15 queuedata.json
[2025-06-05 13:02:36] -rw-r--r-- 1 boinc boinc    495897 Mai 28 15:15 pilot3.tar.gz
[2025-06-05 13:02:36] -rwx------ 1 boinc boinc     37140 Mai 28 15:16 runpilot2-wrapper.sh
[2025-06-05 13:02:36] -rw-r--r-- 1 boinc boinc       100 Jun  5 11:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:02:36] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 11:08 run_atlas
[2025-06-05 13:02:36] -rw-r--r-- 1 boinc boinc       105 Jun  5 11:08 job.xml
[2025-06-05 13:02:36] -rw-r--r-- 1 boinc boinc      9251 Jun  5 11:08 init_data.xml
[2025-06-05 13:02:36] -rw-r--r-- 2 boinc boinc 225289500 Jun  5 11:08 EVNT.44871834._003314.pool.root.1
[2025-06-05 13:02:36] -rw-r--r-- 2 boinc boinc     15093 Jun  5 11:08 start_atlas.sh
[2025-06-05 13:02:36] drwxrwx--x 2 boinc boinc      4096 Jun  5 11:08 shared
[2025-06-05 13:02:36] -rw-r--r-- 2 boinc boinc    508880 Jun  5 11:08 input.tar.gz
[2025-06-05 13:02:36] -rw-r--r-- 1 boinc boinc         0 Jun  5 11:08 boinc_lockfile
[2025-06-05 13:02:36] -rw-r--r-- 1 boinc boinc      2559 Jun  5 11:08 pandaJob.out
[2025-06-05 13:02:36] -rw------- 1 boinc boinc    983281 Jun  5 11:09 agis_schedconf.cvmfs.json
[2025-06-05 13:02:36] -rw------- 1 boinc boinc   1598969 Jun  5 11:09 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:02:36] drwx------ 4 boinc boinc      4096 Jun  5 11:10 pilot3
[2025-06-05 13:02:36] -rw------- 1 boinc boinc 188874712 Jun  5 13:01 HITS.44871837._084938.pool.root.1
[2025-06-05 13:02:36] -rw-r--r-- 1 boinc boinc       529 Jun  5 13:01 boinc_task_state.xml
[2025-06-05 13:02:36] -rw------- 1 boinc boinc      1034 Jun  5 13:02 memory_monitor_summary.json
[2025-06-05 13:02:36] -rw-r--r-- 1 boinc boinc      8192 Jun  5 13:02 boinc_mmap_file
[2025-06-05 13:02:36] -rw-r--r-- 1 boinc boinc        27 Jun  5 13:02 wrapper_checkpoint.txt
[2025-06-05 13:02:36] -rw------- 1 boinc boinc    271887 Jun  5 13:02 log.44871837._084938.job.log.tgz.1
[2025-06-05 13:02:36] -rw------- 1 boinc boinc        95 Jun  5 13:02 pilot_heartbeat.json
[2025-06-05 13:02:36] -rw------- 1 boinc boinc      7677 Jun  5 13:02 heartbeat.json
[2025-06-05 13:02:36] -rw------- 1 boinc boinc      4742 Jun  5 13:02 pilotlog.txt
[2025-06-05 13:02:36] -rw------- 1 boinc boinc    661316 Jun  5 13:02 log.44871837._084938.job.log.1
[2025-06-05 13:02:36] -rw------- 1 boinc boinc       357 Jun  5 13:02 output.list
[2025-06-05 13:02:36] -rw-r--r-- 1 boinc boinc       620 Jun  5 13:02 runtime_log
[2025-06-05 13:02:36] -rw------- 1 boinc boinc    952320 Jun  5 13:02 result.tar.gz
[2025-06-05 13:02:36] -rw-r--r-- 1 boinc boinc      8687 Jun  5 13:02 runtime_log.err
[2025-06-05 13:02:36] -rw------- 1 boinc boinc       637 Jun  5 13:02 EhTKDmKpVe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiEcKDmnJzM1m.diag
[2025-06-05 13:02:36] -rw-r--r-- 1 boinc boinc     20938 Jun  5 13:02 stderr.txt
[2025-06-05 13:02:37] HITS file was successfully produced:
[2025-06-05 13:02:37] -rw------- 1 boinc boinc 188874712 Jun  5 13:01 shared/HITS.pool.root.1
[2025-06-05 13:02:37]  *** Contents of shared directory: ***
[2025-06-05 13:02:37] insgesamt 405916
[2025-06-05 13:02:37] -rw-r--r-- 2 boinc boinc 225289500 Jun  5 11:08 ATLAS.root_0
[2025-06-05 13:02:37] -rw-r--r-- 2 boinc boinc     15093 Jun  5 11:08 start_atlas.sh
[2025-06-05 13:02:37] -rw-r--r-- 2 boinc boinc    508880 Jun  5 11:08 input.tar.gz
[2025-06-05 13:02:37] -rw------- 1 boinc boinc 188874712 Jun  5 13:01 HITS.pool.root.1
[2025-06-05 13:02:37] -rw------- 1 boinc boinc    952320 Jun  5 13:02 result.tar.gz
13:02:38 (789672): run_atlas exited; CPU time 20583.275405
13:02:38 (789672): called boinc_finish(0)

</stderr_txt>
]]>

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