Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:07:09 (26821): wrapper (7.7.26015): starting
05:07:09 (26821): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 05:07:09] Arguments: --nthreads 8
[2025-06-05 05:07:09] Threads: 8
[2025-06-05 05:07:09] Checking for CVMFS
[2025-06-05 05:07:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:07:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:07:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:07:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:07:11] 2.11.2.0 16647 34253 98736 146802 1 16 20344684 25165824 2747 130560 0 18426383 99.745 21814746 4845 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 05:07:11] CVMFS is ok
[2025-06-05 05:07:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:07:11] Checking for apptainer binary...
[2025-06-05 05:07:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:07:11] Running /usr/bin/apptainer --version
[2025-06-05 05:07:11] apptainer version 1.3.2-1.el7
[2025-06-05 05:07:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:37:47] cg-vwn490.simple-grid.lan
[2025-06-05 05:37:47] apptainer works
[2025-06-05 05:37:47] Set ATHENA_PROC_NUMBER=8
[2025-06-05 05:37:47] Set ATHENA_CORE_NUMBER=8
[2025-06-05 05:37:47] Starting ATLAS job with PandaID=6667203458
[2025-06-05 05:37:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:17:20]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:17:20] 2025-06-05 08:32:20,043 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6667203458/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:17:20] 2025-06-05 08:32:20,044 | INFO     | extracted standard info from prmon json
[2025-06-05 11:17:20] 2025-06-05 08:32:20,044 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:17:20] 2025-06-05 08:32:20,044 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:17:20] 2025-06-05 08:32:20,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:17:20] 2025-06-05 08:32:20,044 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:17:20] 2025-06-05 08:32:20,050 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:17:20] 2025-06-05 08:32:20,050 | INFO     | sum of square deviations: 6590404498.0
[2025-06-05 11:17:20] 2025-06-05 08:32:20,052 | INFO     | sum of deviations: 136138876826.00002
[2025-06-05 11:17:20] 2025-06-05 08:32:20,053 | INFO     | mean x: 1749103774.0
[2025-06-05 11:17:20] 2025-06-05 08:32:20,053 | INFO     | mean y: 2429950.0649819495
[2025-06-05 11:17:20] 2025-06-05 08:32:20,060 | INFO     | -- intersect: -36129043211.67201
[2025-06-05 11:17:20] 2025-06-05 08:32:20,061 | INFO     | intersect: -36129043211.67201
[2025-06-05 11:17:20] 2025-06-05 08:32:20,061 | INFO     | chi2: 7.267617522709654
[2025-06-05 11:17:20] 2025-06-05 08:32:20,062 | INFO     | sum of square deviations: 6239923508.0
[2025-06-05 11:17:20] 2025-06-05 08:32:20,064 | INFO     | sum of deviations: 151642345093.49997
[2025-06-05 11:17:20] 2025-06-05 08:32:20,064 | INFO     | mean x: 1749103621.5
[2025-06-05 11:17:20] 2025-06-05 08:32:20,064 | INFO     | mean y: 2436578.908088235
[2025-06-05 11:17:20] 2025-06-05 08:32:20,064 | INFO     | -- intersect: -42504202266.22205
[2025-06-05 11:17:20] 2025-06-05 08:32:20,064 | INFO     | intersect: -42504202266.22205
[2025-06-05 11:17:20] 2025-06-05 08:32:20,065 | INFO     | chi2: 6.544691293705124
[2025-06-05 11:17:20] 2025-06-05 08:32:20,065 | INFO     | current chi2=6.544691293705124 (change=9.947224475497643 %)
[2025-06-05 11:17:20] 2025-06-05 08:32:20,065 | INFO     | right removable region: 271
[2025-06-05 11:17:20] 2025-06-05 08:32:20,065 | INFO     | sum of square deviations: 6239923508.0
[2025-06-05 11:17:20] 2025-06-05 08:32:20,067 | INFO     | sum of deviations: 39436747934.5
[2025-06-05 11:17:20] 2025-06-05 08:32:20,068 | INFO     | mean x: 1749103926.5
[2025-06-05 11:17:20] 2025-06-05 08:32:20,068 | INFO     | mean y: 2472005.2610294116
[2025-06-05 11:17:20] 2025-06-05 08:32:20,068 | INFO     | -- intersect: -11051985725.22061
[2025-06-05 11:17:20] 2025-06-05 08:32:20,068 | INFO     | intersect: -11051985725.22061
[2025-06-05 11:17:20] 2025-06-05 08:32:20,068 | INFO     | chi2: 2.399532423159049
[2025-06-05 11:17:20] 2025-06-05 08:32:20,068 | INFO     | current chi2=2.399532423159049 (change=66.98323190975508 %)
[2025-06-05 11:17:20] 2025-06-05 08:32:20,069 | INFO     | sum of square deviations: 5902093918.0
[2025-06-05 11:17:20] 2025-06-05 08:32:20,071 | INFO     | sum of deviations: -12706727305.000002
[2025-06-05 11:17:20] 2025-06-05 08:32:20,071 | INFO     | mean x: 1749104079.0
[2025-06-05 11:17:20] 2025-06-05 08:32:20,071 | INFO     | mean y: 2495445.423220974
[2025-06-05 11:17:20] 2025-06-05 08:32:20,071 | INFO     | -- intersect: 3768174011.1495247
[2025-06-05 11:17:20] 2025-06-05 08:32:20,071 | INFO     | intersect: 3768174011.1495247
[2025-06-05 11:17:20] 2025-06-05 08:32:20,072 | INFO     | chi2: 0.8574834427259977
[2025-06-05 11:17:20] 2025-06-05 08:32:20,072 | INFO     | current chi2=0.8574834427259977 (change=64.26456110990583 %)
[2025-06-05 11:17:20] 2025-06-05 08:32:20,075 | INFO     | sum of square deviations: 5576683165.5
[2025-06-05 11:17:20] 2025-06-05 08:32:20,077 | INFO     | sum of deviations: -15010358907.5
[2025-06-05 11:17:20] 2025-06-05 08:32:20,077 | INFO     | mean x: 1749104231.5
[2025-06-05 11:17:20] 2025-06-05 08:32:20,077 | INFO     | mean y: 2496496.744274809
[2025-06-05 11:17:20] 2025-06-05 08:32:20,077 | INFO     | -- intersect: 4710435158.898483
[2025-06-05 11:17:20] 2025-06-05 08:32:20,077 | INFO     | intersect: 4710435158.898483
[2025-06-05 11:17:20] 2025-06-05 08:32:20,078 | INFO     | chi2: 0.836402630513019
[2025-06-05 11:17:20] 2025-06-05 08:32:20,078 | INFO     | current chi2=0.836402630513019 (change=2.4584512262955682 %)
[2025-06-05 11:17:20] 2025-06-05 08:32:20,078 | INFO     | left removable region: 30
[2025-06-05 11:17:20] 2025-06-05 08:32:20,078 | INFO     | sum of square deviations: 4340323240.0
[2025-06-05 11:17:20] 2025-06-05 08:32:20,080 | INFO     | sum of deviations: 7147551597.000001
[2025-06-05 11:17:20] 2025-06-05 08:32:20,080 | INFO     | mean x: 1749104506.0
[2025-06-05 11:17:20] 2025-06-05 08:32:20,080 | INFO     | mean y: 2502430.190871369
[2025-06-05 11:17:20] 2025-06-05 08:32:20,080 | INFO     | -- intersect: -2877885507.270717
[2025-06-05 11:17:20] 2025-06-05 08:32:20,080 | INFO     | intersect: -2877885507.270717
[2025-06-05 11:17:20] 2025-06-05 08:32:20,081 | INFO     | chi2: 0.001543379389877899
[2025-06-05 11:17:20] 2025-06-05 08:32:20,081 | INFO     | -- intersect: -2877885507.270717
[2025-06-05 11:17:20] 2025-06-05 08:32:20,081 | INFO     | current memory leak: 1.65 B/s (using 241 data points, chi2=0.00)
[2025-06-05 11:17:20] 2025-06-05 08:32:20,082 | INFO     | ..............................
[2025-06-05 11:17:20] 2025-06-05 08:32:20,082 | INFO     | . Timing measurements:
[2025-06-05 11:17:20] 2025-06-05 08:32:20,082 | INFO     | . get job = 0 s
[2025-06-05 11:17:20] 2025-06-05 08:32:20,082 | INFO     | . initial setup = 2 s
[2025-06-05 11:17:20] 2025-06-05 08:32:20,082 | INFO     | . payload setup = 158 s
[2025-06-05 11:17:20] 2025-06-05 08:32:20,082 | INFO     | . stage-in = 0 s
[2025-06-05 11:17:20] 2025-06-05 08:32:20,082 | INFO     | . payload execution = 17031 s
[2025-06-05 11:17:20] 2025-06-05 08:32:20,082 | INFO     | . stage-out = 3 s
[2025-06-05 11:17:20] 2025-06-05 08:32:20,082 | INFO     | . log creation = 1 s
[2025-06-05 11:17:20] 2025-06-05 08:32:20,083 | INFO     | ..............................
[2025-06-05 11:17:20] 2025-06-05 08:32:20,597 | INFO     | 
[2025-06-05 11:17:20] 2025-06-05 08:32:20,598 | INFO     | job summary report
[2025-06-05 11:17:20] 2025-06-05 08:32:20,598 | INFO     | --------------------------------------------------
[2025-06-05 11:17:20] 2025-06-05 08:32:20,598 | INFO     | PanDA job id: 6667203458
[2025-06-05 11:17:20] 2025-06-05 08:32:20,598 | INFO     | task id: 44871837
[2025-06-05 11:17:20] 2025-06-05 08:32:20,598 | INFO     | errors: (none)
[2025-06-05 11:17:20] 2025-06-05 08:32:20,598 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:17:20] 2025-06-05 08:32:20,598 | INFO     | pilot state: finished 
[2025-06-05 11:17:20] 2025-06-05 08:32:20,598 | INFO     | transexitcode: 0
[2025-06-05 11:17:20] 2025-06-05 08:32:20,598 | INFO     | exeerrorcode: 0
[2025-06-05 11:17:20] 2025-06-05 08:32:20,598 | INFO     | exeerrordiag: 
[2025-06-05 11:17:20] 2025-06-05 08:32:20,598 | INFO     | exitcode: 0
[2025-06-05 11:17:20] 2025-06-05 08:32:20,598 | INFO     | exitmsg: OK
[2025-06-05 11:17:20] 2025-06-05 08:32:20,598 | INFO     | cpuconsumptiontime: 63812 s
[2025-06-05 11:17:20] 2025-06-05 08:32:20,599 | INFO     | nevents: 400
[2025-06-05 11:17:20] 2025-06-05 08:32:20,599 | INFO     | neventsw: 0
[2025-06-05 11:17:20] 2025-06-05 08:32:20,599 | INFO     | pid: 22910
[2025-06-05 11:17:20] 2025-06-05 08:32:20,599 | INFO     | pgrp: 22910
[2025-06-05 11:17:20] 2025-06-05 08:32:20,599 | INFO     | corecount: 8
[2025-06-05 11:17:20] 2025-06-05 08:32:20,599 | INFO     | event service: False
[2025-06-05 11:17:20] 2025-06-05 08:32:20,599 | INFO     | sizes: {0: 2396563, 1: 2397248, 2: 2397447, 13: 2397447, 23: 2397503, 34: 2397531, 45: 2397687, 55: 2397715, 66: 2397743, 77: 2397771, 88: 2397827, 93: 2398341, 98
[2025-06-05 11:17:20] 2025-06-05 08:32:20,599 | INFO     | --------------------------------------------------
[2025-06-05 11:17:20] 2025-06-05 08:32:20,599 | INFO     | 
[2025-06-05 11:17:20] 2025-06-05 08:32:20,599 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-05 11:17:20] 2025-06-05 08:32:21,183 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,183 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,183 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,183 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,184 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:17:20] 2025-06-05 08:32:21,185 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,185 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:17:20] 2025-06-05 08:32:21,185 | INFO     | job 6667203458 has completed (purged errors)
[2025-06-05 11:17:20] 2025-06-05 08:32:21,185 | INFO     | overall cleanup function is called
[2025-06-05 11:17:20] 2025-06-05 08:32:22,194 | INFO     | --- collectZombieJob: --- 10, [22910]
[2025-06-05 11:17:20] 2025-06-05 08:32:22,195 | INFO     | zombie collector waiting for pid 22910
[2025-06-05 11:17:20] 2025-06-05 08:32:22,195 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:17:20] 2025-06-05 08:32:22,195 | INFO     | collected zombie processes
[2025-06-05 11:17:20] 2025-06-05 08:32:22,195 | INFO     | will attempt to kill all subprocesses of pid=22910
[2025-06-05 11:17:20] 2025-06-05 08:32:22,336 | INFO     | process IDs to be killed: [22910] (in reverse order)
[2025-06-05 11:17:20] 2025-06-05 08:32:22,861 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:17:20] 2025-06-05 08:32:22,861 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:17:20] 2025-06-05 08:32:22,865 | INFO     | did not find any defunct processes belonging to 22910
[2025-06-05 11:17:20] 2025-06-05 08:32:22,869 | INFO     | did not find any defunct processes belonging to 22910
[2025-06-05 11:17:20] 2025-06-05 08:32:22,870 | INFO     | ready for new job
[2025-06-05 11:17:20] 2025-06-05 08:32:22,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:17:20] 2025-06-05 08:32:22,872 | INFO     | **************************************
[2025-06-05 11:17:20] 2025-06-05 08:32:22,873 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:17:20] 2025-06-05 08:32:22,873 | INFO     | **************************************
[2025-06-05 11:17:20] 2025-06-05 08:32:22,873 | INFO     | 
[2025-06-05 11:17:20] 2025-06-05 08:32:22,873 | INFO     | pilot is running in a VM
[2025-06-05 11:17:20] 2025-06-05 08:32:22,873 | INFO     | architecture information:
[2025-06-05 11:17:20] 2025-06-05 08:32:22,875 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:17:20] 2025-06-05 08:32:22,899 | INFO     | cat /etc/os-release:
[2025-06-05 11:17:20] NAME="CentOS Linux"
[2025-06-05 11:17:20] VERSION="7 (Core)"
[2025-06-05 11:17:20] ID="centos"
[2025-06-05 11:17:20] ID_LIKE="rhel fedora"
[2025-06-05 11:17:20] VERSION_ID="7"
[2025-06-05 11:17:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:17:20] ANSI_COLOR="0;31"
[2025-06-05 11:17:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:17:20] HOME_URL="https://www.centos.org/"
[2025-06-05 11:17:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:17:20] 
[2025-06-05 11:17:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:17:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:17:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:17:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:17:20] 
[2025-06-05 11:17:20] 2025-06-05 08:32:22,900 | INFO     | **************************************
[2025-06-05 11:17:20] 2025-06-05 08:32:23,404 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-05 11:17:20] 2025-06-05 08:32:23,477 | INFO     | sufficient remaining disk space (497344839680 B)
[2025-06-05 11:17:20] 2025-06-05 08:32:23,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:17:20] 2025-06-05 08:32:23,477 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:17:20] 2025-06-05 08:32:23,478 | INFO     | update_server=False
[2025-06-05 11:17:20] 2025-06-05 08:32:23,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:17:20] 2025-06-05 08:32:23,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:17:20] 2025-06-05 08:32:23,478 | INFO     | aborting loop
[2025-06-05 11:17:20] 2025-06-05 08:32:23,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:17:20] 2025-06-05 08:32:23,824 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:17:20] 2025-06-05 08:32:23,825 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:17:20] 2025-06-05 08:32:23,825 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:17:20] 2025-06-05 08:32:24,240 | INFO     | all data control threads have been joined
[2025-06-05 11:17:20] 2025-06-05 08:32:24,289 | INFO     | all job control threads have been joined
[2025-06-05 11:17:20] 2025-06-05 08:32:24,484 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:24,484 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:24,630 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:24,687 | INFO     | all payload control threads have been joined
[2025-06-05 11:17:20] 2025-06-05 08:32:24,881 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:24,998 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:25,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:25,108 | INFO     | [job] validate thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:25,230 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:17:20] 2025-06-05 08:32:25,246 | INFO     | [data] control thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:25,272 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:25,295 | INFO     | [job] control thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:25,339 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:25,693 | INFO     | [payload] control thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:25,735 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:26,076 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:26,236 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:26,244 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:17:20] 2025-06-05 08:32:30,253 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:17:20] 2025-06-05 08:32:31,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140481774741312)>', '<ExcThread(monitor, started 140481191208704)>']
[2025-06-05 11:17:20] 2025-06-05 08:32:32,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:17:20] 2025-06-05 08:32:32,878 | INFO     | [monitor] control thread has ended
[2025-06-05 11:17:20] 2025-06-05 08:32:36,988 | INFO     | all workflow threads have been joined
[2025-06-05 11:17:20] 2025-06-05 08:32:36,989 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:17:20] 2025-06-05 08:32:36,989 | INFO     | traces error code: 0
[2025-06-05 11:17:20] 2025-06-05 08:32:36,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:17:20] 2025-06-05 08:32:37,335 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:17:20] 2025-06-05 08:32:37,338 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:17:20] 2025-06-05 08:32:37,342 [wrapper] pilotpid: 15720
[2025-06-05 11:17:20] 2025-06-05 08:32:37,396 [wrapper] Pilot exit status: 0
[2025-06-05 11:17:20] 2025-06-05 08:32:37,841 [wrapper] pandaids: 6667203458
[2025-06-05 11:17:20] 2025-06-05 08:32:38,726 [wrapper] cleanup supervisor_pilot 20600 15721
[2025-06-05 11:17:20] 2025-06-05 08:32:38,796 [wrapper] Test setup, not cleaning
[2025-06-05 11:17:20] 2025-06-05 08:32:38,896 [wrapper] apfmon messages muted
[2025-06-05 11:17:20] 2025-06-05 08:32:38,989 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:17:20] 2025-06-05 08:32:39,061 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:17:20]  *** Error codes and diagnostics ***
[2025-06-05 11:17:20]     "exeErrorCode": 0,
[2025-06-05 11:17:20]     "exeErrorDiag": "",
[2025-06-05 11:17:20]     "pilotErrorCode": 0,
[2025-06-05 11:17:20]     "pilotErrorDiag": "",
[2025-06-05 11:17:20]  *** Listing of results directory ***
[2025-06-05 11:17:20] total 415980
[2025-06-05 11:17:20] -rw-r--r--. 1 boinc boinc    495897 May 27 17:39 pilot3.tar.gz
[2025-06-05 11:17:20] -rw-r--r--. 1 boinc boinc      5111 May 27 18:05 queuedata.json
[2025-06-05 11:17:20] -rwx------. 1 boinc boinc     37140 May 27 18:08 runpilot2-wrapper.sh
[2025-06-05 11:17:20] -rw-r--r--. 1 boinc boinc       100 Jun  5 05:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:17:20] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 05:07 run_atlas
[2025-06-05 11:17:20] -rw-r--r--. 1 boinc boinc       105 Jun  5 05:07 job.xml
[2025-06-05 11:17:20] -rw-r--r--. 2 boinc boinc 222089491 Jun  5 05:07 EVNT.44871834._002749.pool.root.1
[2025-06-05 11:17:20] drwxrwx--x. 2 boinc boinc        68 Jun  5 05:07 shared
[2025-06-05 11:17:20] -rw-r--r--. 2 boinc boinc    508875 Jun  5 05:07 input.tar.gz
[2025-06-05 11:17:20] -rw-r--r--. 1 boinc boinc      6392 Jun  5 05:07 init_data.xml
[2025-06-05 11:17:20] -rw-r--r--. 2 boinc boinc     15093 Jun  5 05:07 start_atlas.sh
[2025-06-05 11:17:20] -rw-r--r--. 1 boinc boinc         0 Jun  5 05:07 boinc_lockfile
[2025-06-05 11:17:20] -rw-r--r--. 1 boinc boinc      2558 Jun  5 05:37 pandaJob.out
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc    987109 Jun  5 05:40 agis_schedconf.cvmfs.json
[2025-06-05 11:17:20] drwx------. 4 boinc boinc      4096 Jun  5 05:40 pilot3
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc 196217478 Jun  5 10:29 HITS.44871837._069914.pool.root.1
[2025-06-05 11:17:20] -rw-r--r--. 1 boinc boinc       531 Jun  5 10:29 boinc_task_state.xml
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc      1015 Jun  5 10:30 memory_monitor_summary.json
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc   1598969 Jun  5 10:30 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc    414550 Jun  5 10:30 log.44871837._069914.job.log.tgz.1
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc        95 Jun  5 10:31 pilot_heartbeat.json
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc      7691 Jun  5 10:32 heartbeat.json
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc      4416 Jun  5 10:32 pilotlog.txt
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc   1506591 Jun  5 10:32 log.44871837._069914.job.log.1
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc       357 Jun  5 10:32 output.list
[2025-06-05 11:17:20] -rw-r--r--. 1 boinc boinc       620 Jun  5 10:32 runtime_log
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc   1935360 Jun  5 10:32 result.tar.gz
[2025-06-05 11:17:20] -rw-r--r--. 1 boinc boinc      8659 Jun  5 10:32 runtime_log.err
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc       657 Jun  5 10:32 A8RKDmw1Be7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8pZKDmsWOPZn.diag
[2025-06-05 11:17:20] -rw-r--r--. 1 boinc boinc      8192 Jun  5 11:17 boinc_mmap_file
[2025-06-05 11:17:20] -rw-r--r--. 1 boinc boinc        28 Jun  5 11:17 wrapper_checkpoint.txt
[2025-06-05 11:17:20] -rw-r--r--. 1 boinc boinc     20525 Jun  5 11:17 stderr.txt
[2025-06-05 11:17:20] HITS file was successfully produced:
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc 196217478 Jun  5 10:29 shared/HITS.pool.root.1
[2025-06-05 11:17:20]  *** Contents of shared directory: ***
[2025-06-05 11:17:20] total 410916
[2025-06-05 11:17:20] -rw-r--r--. 2 boinc boinc 222089491 Jun  5 05:07 ATLAS.root_0
[2025-06-05 11:17:20] -rw-r--r--. 2 boinc boinc    508875 Jun  5 05:07 input.tar.gz
[2025-06-05 11:17:20] -rw-r--r--. 2 boinc boinc     15093 Jun  5 05:07 start_atlas.sh
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc 196217478 Jun  5 10:29 HITS.pool.root.1
[2025-06-05 11:17:20] -rw-------. 1 boinc boinc   1935360 Jun  5 10:32 result.tar.gz
11:17:22 (26821): run_atlas exited; CPU time 64016.108522
11:17:22 (26821): called boinc_finish(0)

</stderr_txt>
]]>

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