Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:22:29 (13480): wrapper (7.7.26015): starting
12:22:29 (13480): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 12:22:29] Arguments: --nthreads 8
[2025-06-05 12:22:29] Threads: 8
[2025-06-05 12:22:29] Checking for CVMFS
[2025-06-05 12:22:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 12:22:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 12:22:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 12:22:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 12:22:31] 2.11.2.0 13438 34516 88992 146816 3 14 21767467 25165824 3911 130560 0 18999628 99.821 20348859 2239 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 12:22:31] CVMFS is ok
[2025-06-05 12:22:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:22:31] Checking for apptainer binary...
[2025-06-05 12:22:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 12:22:31] Running /usr/bin/apptainer --version
[2025-06-05 12:22:31] apptainer version 1.3.2-1.el7
[2025-06-05 12:22:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:22:48] cg-vwn257.simple-grid.lan
[2025-06-05 12:22:48] apptainer works
[2025-06-05 12:22:48] Set ATHENA_PROC_NUMBER=8
[2025-06-05 12:22:48] Set ATHENA_CORE_NUMBER=8
[2025-06-05 12:22:48] Starting ATLAS job with PandaID=6666851626
[2025-06-05 12:22:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:01:26]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:01:26] 2025-06-05 15:42:00,007 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:01:26] 2025-06-05 15:42:00,007 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:01:26] 2025-06-05 15:42:00,013 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:01:26] 2025-06-05 15:42:00,014 | INFO     | sum of square deviations: 8456158550.0
[2025-06-05 18:01:26] 2025-06-05 15:42:00,017 | INFO     | sum of deviations: 86356630974.99998
[2025-06-05 18:01:26] 2025-06-05 15:42:00,017 | INFO     | mean x: 1749128824.0
[2025-06-05 18:01:26] 2025-06-05 15:42:00,017 | INFO     | mean y: 2468742.219269103
[2025-06-05 18:01:26] 2025-06-05 15:42:00,017 | INFO     | -- intersect: -17860118801.376835
[2025-06-05 18:01:26] 2025-06-05 15:42:00,017 | INFO     | intersect: -17860118801.376835
[2025-06-05 18:01:26] 2025-06-05 15:42:00,018 | INFO     | chi2: 8.393361204300499
[2025-06-05 18:01:26] 2025-06-05 15:42:00,018 | INFO     | sum of square deviations: 8041713570.0
[2025-06-05 18:01:26] 2025-06-05 15:42:00,021 | INFO     | sum of deviations: 105095961728.50002
[2025-06-05 18:01:26] 2025-06-05 15:42:00,021 | INFO     | mean x: 1749128671.5
[2025-06-05 18:01:26] 2025-06-05 15:42:00,021 | INFO     | mean y: 2475538.2804054054
[2025-06-05 18:01:26] 2025-06-05 15:42:00,022 | INFO     | -- intersect: -22856627601.62241
[2025-06-05 18:01:26] 2025-06-05 15:42:00,022 | INFO     | intersect: -22856627601.62241
[2025-06-05 18:01:26] 2025-06-05 15:42:00,022 | INFO     | chi2: 7.683286626409911
[2025-06-05 18:01:26] 2025-06-05 15:42:00,022 | INFO     | current chi2=7.683286626409911 (change=8.459954964487496 %)
[2025-06-05 18:01:26] 2025-06-05 15:42:00,022 | INFO     | right removable region: 295
[2025-06-05 18:01:26] 2025-06-05 15:42:00,023 | INFO     | sum of square deviations: 8041713570.0
[2025-06-05 18:01:26] 2025-06-05 15:42:00,026 | INFO     | sum of deviations: -20199870833.500008
[2025-06-05 18:01:26] 2025-06-05 15:42:00,026 | INFO     | mean x: 1749128976.5
[2025-06-05 18:01:26] 2025-06-05 15:42:00,026 | INFO     | mean y: 2507930.4222972975
[2025-06-05 18:01:26] 2025-06-05 15:42:00,026 | INFO     | -- intersect: 4396121193.177697
[2025-06-05 18:01:26] 2025-06-05 15:42:00,026 | INFO     | intersect: 4396121193.177697
[2025-06-05 18:01:26] 2025-06-05 15:42:00,027 | INFO     | chi2: 3.4052673953117054
[2025-06-05 18:01:26] 2025-06-05 15:42:00,027 | INFO     | current chi2=3.4052673953117054 (change=59.42903787380255 %)
[2025-06-05 18:01:26] 2025-06-05 15:42:00,027 | INFO     | sum of square deviations: 7641036290.0
[2025-06-05 18:01:26] 2025-06-05 15:42:00,030 | INFO     | sum of deviations: -91116102417.00002
[2025-06-05 18:01:26] 2025-06-05 15:42:00,030 | INFO     | mean x: 1749129129.0
[2025-06-05 18:01:26] 2025-06-05 15:42:00,030 | INFO     | mean y: 2534855.8419243987
[2025-06-05 18:01:26] 2025-06-05 15:42:00,030 | INFO     | -- intersect: 20860154530.688675
[2025-06-05 18:01:26] 2025-06-05 15:42:00,030 | INFO     | intersect: 20860154530.688675
[2025-06-05 18:01:26] 2025-06-05 15:42:00,031 | INFO     | chi2: 1.153284516774057
[2025-06-05 18:01:26] 2025-06-05 15:42:00,031 | INFO     | current chi2=1.153284516774057 (change=66.13233608726667 %)
[2025-06-05 18:01:26] 2025-06-05 15:42:00,032 | INFO     | sum of square deviations: 7253894147.5
[2025-06-05 18:01:26] 2025-06-05 15:42:00,034 | INFO     | sum of deviations: -99743004938.49994
[2025-06-05 18:01:26] 2025-06-05 15:42:00,034 | INFO     | mean x: 1749129281.5
[2025-06-05 18:01:26] 2025-06-05 15:42:00,035 | INFO     | mean y: 2538215.2482517483
[2025-06-05 18:01:26] 2025-06-05 15:42:00,035 | INFO     | -- intersect: 24053538549.028538
[2025-06-05 18:01:26] 2025-06-05 15:42:00,035 | INFO     | intersect: 24053538549.028538
[2025-06-05 18:01:26] 2025-06-05 15:42:00,035 | INFO     | chi2: 1.0503228937713378
[2025-06-05 18:01:26] 2025-06-05 15:42:00,035 | INFO     | current chi2=1.0503228937713378 (change=8.927686230516763 %)
[2025-06-05 18:01:26] 2025-06-05 15:42:00,035 | INFO     | left removable region: 30
[2025-06-05 18:01:26] 2025-06-05 15:42:00,036 | INFO     | sum of square deviations: 5770452380.0
[2025-06-05 18:01:26] 2025-06-05 15:42:00,038 | INFO     | sum of deviations: -53005212631.99999
[2025-06-05 18:01:26] 2025-06-05 15:42:00,038 | INFO     | mean x: 1749129556.0
[2025-06-05 18:01:26] 2025-06-05 15:42:00,038 | INFO     | mean y: 2535394.59245283
[2025-06-05 18:01:26] 2025-06-05 15:42:00,039 | INFO     | -- intersect: 16069383872.197556
[2025-06-05 18:01:26] 2025-06-05 15:42:00,039 | INFO     | intersect: 16069383872.197556
[2025-06-05 18:01:26] 2025-06-05 15:42:00,039 | INFO     | chi2: 0.22723811990669449
[2025-06-05 18:01:26] 2025-06-05 15:42:00,039 | INFO     | -- intersect: 16069383872.197556
[2025-06-05 18:01:26] 2025-06-05 15:42:00,039 | INFO     | current memory leak: -9.19 B/s (using 265 data points, chi2=0.23)
[2025-06-05 18:01:26] 2025-06-05 15:42:00,040 | INFO     | ..............................
[2025-06-05 18:01:26] 2025-06-05 15:42:00,040 | INFO     | . Timing measurements:
[2025-06-05 18:01:26] 2025-06-05 15:42:00,041 | INFO     | . get job = 0 s
[2025-06-05 18:01:26] 2025-06-05 15:42:00,041 | INFO     | . initial setup = 11 s
[2025-06-05 18:01:26] 2025-06-05 15:42:00,041 | INFO     | . payload setup = 165 s
[2025-06-05 18:01:26] 2025-06-05 15:42:00,041 | INFO     | . stage-in = 0 s
[2025-06-05 18:01:26] 2025-06-05 15:42:00,041 | INFO     | . payload execution = 18500 s
[2025-06-05 18:01:26] 2025-06-05 15:42:00,041 | INFO     | . stage-out = 3 s
[2025-06-05 18:01:26] 2025-06-05 15:42:00,041 | INFO     | . log creation = 1 s
[2025-06-05 18:01:26] 2025-06-05 15:42:00,041 | INFO     | ..............................
[2025-06-05 18:01:26] 2025-06-05 15:42:00,398 | INFO     | PID=21679 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 18:01:26] 2025-06-05 15:42:00,398 | INFO     | .. there are 9 such processes running
[2025-06-05 18:01:26] 2025-06-05 15:42:00,402 | INFO     | 
[2025-06-05 18:01:26] 2025-06-05 15:42:00,402 | INFO     | job summary report
[2025-06-05 18:01:26] 2025-06-05 15:42:00,402 | INFO     | --------------------------------------------------
[2025-06-05 18:01:26] 2025-06-05 15:42:00,402 | INFO     | PanDA job id: 6666851626
[2025-06-05 18:01:26] 2025-06-05 15:42:00,402 | INFO     | task id: 44871837
[2025-06-05 18:01:26] 2025-06-05 15:42:00,402 | INFO     | errors: (none)
[2025-06-05 18:01:26] 2025-06-05 15:42:00,403 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:01:26] 2025-06-05 15:42:00,403 | INFO     | pilot state: finished 
[2025-06-05 18:01:26] 2025-06-05 15:42:00,403 | INFO     | transexitcode: 0
[2025-06-05 18:01:26] 2025-06-05 15:42:00,403 | INFO     | exeerrorcode: 0
[2025-06-05 18:01:26] 2025-06-05 15:42:00,403 | INFO     | exeerrordiag: 
[2025-06-05 18:01:26] 2025-06-05 15:42:00,403 | INFO     | exitcode: 0
[2025-06-05 18:01:26] 2025-06-05 15:42:00,403 | INFO     | exitmsg: OK
[2025-06-05 18:01:26] 2025-06-05 15:42:00,403 | INFO     | cpuconsumptiontime: 70112 s
[2025-06-05 18:01:26] 2025-06-05 15:42:00,403 | INFO     | nevents: 400
[2025-06-05 18:01:26] 2025-06-05 15:42:00,403 | INFO     | neventsw: 0
[2025-06-05 18:01:26] 2025-06-05 15:42:00,404 | INFO     | pid: 32248
[2025-06-05 18:01:26] 2025-06-05 15:42:00,404 | INFO     | pgrp: 32248
[2025-06-05 18:01:26] 2025-06-05 15:42:00,404 | INFO     | corecount: 8
[2025-06-05 18:01:26] 2025-06-05 15:42:00,404 | INFO     | event service: False
[2025-06-05 18:01:26] 2025-06-05 15:42:00,404 | INFO     | sizes: {0: 2396564, 1: 2397249, 2: 2397448, 13: 2397448, 23: 2397504, 34: 2397532, 45: 2397688, 56: 2397716, 66: 2397744, 77: 2397772, 79: 2398034, 88: 2398370, 18
[2025-06-05 18:01:26] 2025-06-05 15:42:00,404 | INFO     | --------------------------------------------------
[2025-06-05 18:01:26] 2025-06-05 15:42:00,404 | INFO     | 
[2025-06-05 18:01:26] 2025-06-05 15:42:00,404 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-05 18:01:26] 2025-06-05 15:42:00,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,871 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,871 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,871 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,871 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,872 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,872 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,872 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,872 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,872 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,872 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,873 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:01:26] 2025-06-05 15:42:00,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,873 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:01:26] 2025-06-05 15:42:00,873 | INFO     | job 6666851626 has completed (purged errors)
[2025-06-05 18:01:26] 2025-06-05 15:42:00,873 | INFO     | overall cleanup function is called
[2025-06-05 18:01:26] 2025-06-05 15:42:01,883 | INFO     | --- collectZombieJob: --- 10, [32248]
[2025-06-05 18:01:26] 2025-06-05 15:42:01,883 | INFO     | zombie collector waiting for pid 32248
[2025-06-05 18:01:26] 2025-06-05 15:42:01,883 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:01:26] 2025-06-05 15:42:01,883 | INFO     | collected zombie processes
[2025-06-05 18:01:26] 2025-06-05 15:42:01,883 | INFO     | will attempt to kill all subprocesses of pid=32248
[2025-06-05 18:01:26] 2025-06-05 15:42:02,009 | INFO     | process IDs to be killed: [32248] (in reverse order)
[2025-06-05 18:01:26] 2025-06-05 15:42:02,741 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:01:26] 2025-06-05 15:42:02,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:01:26] 2025-06-05 15:42:02,752 | INFO     | did not find any defunct processes belonging to 32248
[2025-06-05 18:01:26] 2025-06-05 15:42:02,755 | INFO     | did not find any defunct processes belonging to 32248
[2025-06-05 18:01:26] 2025-06-05 15:42:02,756 | INFO     | ready for new job
[2025-06-05 18:01:26] 2025-06-05 15:42:02,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:01:26] 2025-06-05 15:42:02,758 | INFO     | **************************************
[2025-06-05 18:01:26] 2025-06-05 15:42:02,759 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:01:26] 2025-06-05 15:42:02,759 | INFO     | **************************************
[2025-06-05 18:01:26] 2025-06-05 15:42:02,759 | INFO     | 
[2025-06-05 18:01:26] 2025-06-05 15:42:02,759 | INFO     | pilot is running in a VM
[2025-06-05 18:01:26] 2025-06-05 15:42:02,759 | INFO     | architecture information:
[2025-06-05 18:01:26] 2025-06-05 15:42:02,772 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:01:26] 2025-06-05 15:42:02,976 | INFO     | cat /etc/os-release:
[2025-06-05 18:01:26] NAME="CentOS Linux"
[2025-06-05 18:01:26] VERSION="7 (Core)"
[2025-06-05 18:01:26] ID="centos"
[2025-06-05 18:01:26] ID_LIKE="rhel fedora"
[2025-06-05 18:01:26] VERSION_ID="7"
[2025-06-05 18:01:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:01:26] ANSI_COLOR="0;31"
[2025-06-05 18:01:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:01:26] HOME_URL="https://www.centos.org/"
[2025-06-05 18:01:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:01:26] 
[2025-06-05 18:01:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:01:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:01:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:01:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:01:26] 
[2025-06-05 18:01:26] 2025-06-05 15:42:02,976 | INFO     | **************************************
[2025-06-05 18:01:26] 2025-06-05 15:42:03,480 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-05 18:01:26] 2025-06-05 15:42:03,736 | INFO     | sufficient remaining disk space (496876126208 B)
[2025-06-05 18:01:26] 2025-06-05 15:42:03,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:01:26] 2025-06-05 15:42:03,736 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:01:26] 2025-06-05 15:42:03,736 | INFO     | update_server=False
[2025-06-05 18:01:26] 2025-06-05 15:42:03,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:01:26] 2025-06-05 15:42:03,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:01:26] 2025-06-05 15:42:03,741 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:01:26] 2025-06-05 15:42:03,960 | INFO     | all data control threads have been joined
[2025-06-05 18:01:26] 2025-06-05 15:42:04,055 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 18:01:26] 2025-06-05 15:42:04,055 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 18:01:26] 2025-06-05 15:42:04,055 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:01:26] 2025-06-05 15:42:04,055 | INFO     | will abort loop
[2025-06-05 18:01:26] 2025-06-05 15:42:04,140 | INFO     | all payload control threads have been joined
[2025-06-05 18:01:26] 2025-06-05 15:42:04,149 | INFO     | all job control threads have been joined
[2025-06-05 18:01:26] 2025-06-05 15:42:04,413 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:01:26] 2025-06-05 15:42:04,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:01:26] 2025-06-05 15:42:04,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:01:26] 2025-06-05 15:42:04,743 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:04,761 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:04,873 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:04,902 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:04,965 | INFO     | [data] control thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:05,061 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:05,146 | INFO     | [payload] control thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:05,154 | INFO     | [job] control thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:05,186 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:05,205 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:05,213 | INFO     | [job] validate thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:05,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:01:26] 2025-06-05 15:42:05,750 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:05,792 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:06,049 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:06,223 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:07,746 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:01:26] 2025-06-05 15:42:08,666 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139640403285824)>', '<ExcThread(monitor, started 139639956420352)>']
[2025-06-05 18:01:26] 2025-06-05 15:42:09,444 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:01:26] 2025-06-05 15:42:09,444 | INFO     | [monitor] control thread has ended
[2025-06-05 18:01:26] 2025-06-05 15:42:13,692 | INFO     | all workflow threads have been joined
[2025-06-05 18:01:26] 2025-06-05 15:42:13,692 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:01:26] 2025-06-05 15:42:13,692 | INFO     | traces error code: 0
[2025-06-05 18:01:26] 2025-06-05 15:42:13,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:01:26] 2025-06-05 15:42:14,092 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:01:26] 2025-06-05 15:42:14,141 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:01:26] 2025-06-05 15:42:14,208 [wrapper] pilotpid: 21679
[2025-06-05 18:01:26] 2025-06-05 15:42:14,263 [wrapper] Pilot exit status: 0
[2025-06-05 18:01:26] 2025-06-05 15:42:14,579 [wrapper] pandaids: 6666851626
[2025-06-05 18:01:26] 2025-06-05 15:42:15,127 [wrapper] cleanup supervisor_pilot  1224 21680
[2025-06-05 18:01:26] 2025-06-05 15:42:15,232 [wrapper] Test setup, not cleaning
[2025-06-05 18:01:26] 2025-06-05 15:42:15,324 [wrapper] apfmon messages muted
[2025-06-05 18:01:26] 2025-06-05 15:42:15,424 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:01:26] 2025-06-05 15:42:15,513 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:01:26]  *** Error codes and diagnostics ***
[2025-06-05 18:01:26]     "exeErrorCode": 0,
[2025-06-05 18:01:26]     "exeErrorDiag": "",
[2025-06-05 18:01:26]     "pilotErrorCode": 0,
[2025-06-05 18:01:26]     "pilotErrorDiag": "",
[2025-06-05 18:01:26]  *** Listing of results directory ***
[2025-06-05 18:01:26] total 419864
[2025-06-05 18:01:26] -rw-r--r--. 1 boinc boinc    495897 May 27 11:27 pilot3.tar.gz
[2025-06-05 18:01:26] -rwx------. 1 boinc boinc     37140 May 27 11:49 runpilot2-wrapper.sh
[2025-06-05 18:01:26] -rw-r--r--. 1 boinc boinc      5111 May 27 11:49 queuedata.json
[2025-06-05 18:01:26] -rw-r--r--. 1 boinc boinc       100 Jun  5 12:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:01:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 12:22 run_atlas
[2025-06-05 18:01:26] -rw-r--r--. 1 boinc boinc       105 Jun  5 12:22 job.xml
[2025-06-05 18:01:26] -rw-r--r--. 2 boinc boinc 226647686 Jun  5 12:22 EVNT.44871834._002583.pool.root.1
[2025-06-05 18:01:26] -rw-r--r--. 1 boinc boinc      6389 Jun  5 12:22 init_data.xml
[2025-06-05 18:01:26] -rw-r--r--. 2 boinc boinc     15093 Jun  5 12:22 start_atlas.sh
[2025-06-05 18:01:26] drwxrwx--x. 2 boinc boinc        68 Jun  5 12:22 shared
[2025-06-05 18:01:26] -rw-r--r--. 2 boinc boinc    508875 Jun  5 12:22 input.tar.gz
[2025-06-05 18:01:26] -rw-r--r--. 1 boinc boinc         0 Jun  5 12:22 boinc_lockfile
[2025-06-05 18:01:26] -rw-r--r--. 1 boinc boinc      2559 Jun  5 12:22 pandaJob.out
[2025-06-05 18:01:26] -rw-------. 1 boinc boinc    982836 Jun  5 12:26 agis_schedconf.cvmfs.json
[2025-06-05 18:01:26] drwx------. 4 boinc boinc      4096 Jun  5 12:26 pilot3
[2025-06-05 18:01:26] -rw-------. 1 boinc boinc 195422560 Jun  5 17:39 HITS.44871837._065527.pool.root.1
[2025-06-05 18:01:26] -rw-r--r--. 1 boinc boinc       531 Jun  5 17:39 boinc_task_state.xml
[2025-06-05 18:01:26] -rw-------. 1 boinc boinc      1016 Jun  5 17:40 memory_monitor_summary.json
[2025-06-05 18:01:26] -rw-------. 1 boinc boinc   1598969 Jun  5 17:40 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:01:26] -rw-------. 1 boinc boinc    417853 Jun  5 17:40 log.44871837._065527.job.log.tgz.1
[2025-06-05 18:01:26] -rw-------. 1 boinc boinc        95 Jun  5 17:41 pilot_heartbeat.json
[2025-06-05 18:01:26] -rw-------. 1 boinc boinc      7692 Jun  5 17:42 heartbeat.json
[2025-06-05 18:01:26] -rw-------. 1 boinc boinc      4602 Jun  5 17:42 pilotlog.txt
[2025-06-05 18:01:26] -rw-------. 1 boinc boinc   1607243 Jun  5 17:42 log.44871837._065527.job.log.1
[2025-06-05 18:01:26] -rw-------. 1 boinc boinc       357 Jun  5 17:42 output.list
[2025-06-05 18:01:26] -rw-r--r--. 1 boinc boinc       620 Jun  5 17:42 runtime_log
[2025-06-05 18:01:26] -rw-------. 1 boinc boinc   2048000 Jun  5 17:42 result.tar.gz
[2025-06-05 18:01:26] -rw-r--r--. 1 boinc boinc      8659 Jun  5 17:42 runtime_log.err
[2025-06-05 18:01:26] -rw-------. 1 boinc boinc       657 Jun  5 17:42 B9GNDmt65d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwgRKDmWDeu2n.diag
[2025-06-05 18:01:26] -rw-r--r--. 1 boinc boinc      8192 Jun  5 18:01 boinc_mmap_file
[2025-06-05 18:01:26] -rw-r--r--. 1 boinc boinc        28 Jun  5 18:01 wrapper_checkpoint.txt
[2025-06-05 18:01:26] -rw-r--r--. 1 boinc boinc     20621 Jun  5 18:01 stderr.txt
[2025-06-05 18:01:27] HITS file was successfully produced:
[2025-06-05 18:01:27] -rw-------. 1 boinc boinc 195422560 Jun  5 17:39 shared/HITS.pool.root.1
[2025-06-05 18:01:27]  *** Contents of shared directory: ***
[2025-06-05 18:01:27] total 414696
[2025-06-05 18:01:27] -rw-r--r--. 2 boinc boinc 226647686 Jun  5 12:22 ATLAS.root_0
[2025-06-05 18:01:27] -rw-r--r--. 2 boinc boinc     15093 Jun  5 12:22 start_atlas.sh
[2025-06-05 18:01:27] -rw-r--r--. 2 boinc boinc    508875 Jun  5 12:22 input.tar.gz
[2025-06-05 18:01:27] -rw-------. 1 boinc boinc 195422560 Jun  5 17:39 HITS.pool.root.1
[2025-06-05 18:01:27] -rw-------. 1 boinc boinc   2048000 Jun  5 17:42 result.tar.gz
18:01:28 (13480): run_atlas exited; CPU time 70368.862439
18:01:28 (13480): called boinc_finish(0)

</stderr_txt>
]]>

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