Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:53:13 (1634983): wrapper (7.7.26015): starting
17:53:13 (1634983): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 17:53:13] Arguments: --nthreads 8
[2025-06-04 17:53:13] Threads: 8
[2025-06-04 17:53:13] Checking for CVMFS
[2025-06-04 17:53:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:53:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:53:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:53:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:53:14] 2.12.6.0 54733 37741 545160 146795 1 527 21272965 32935936 32465 16776704 1 502766062 99.712 357158088 21693 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 17:53:14] CVMFS is ok
[2025-06-04 17:53:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:53:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:53:14] Further information can be found at the LHC@home message board.
[2025-06-04 17:53:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:53:14] Checking for apptainer binary...
[2025-06-04 17:53:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:53:14] Running /usr/bin/apptainer --version
[2025-06-04 17:53:14] apptainer version 1.4.1-1.el9
[2025-06-04 17:53:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:53:14] c7-2-10.aglt2.org
[2025-06-04 17:53:14] apptainer works
[2025-06-04 17:53:14] Set ATHENA_PROC_NUMBER=8
[2025-06-04 17:53:14] Set ATHENA_CORE_NUMBER=8
[2025-06-04 17:53:14] Starting ATLAS job with PandaID=6667102977
[2025-06-04 17:53:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:14:32]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:14:32]  protocol_id=None
[2025-06-04 19:14:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 19:14:32]  replicas=None
[2025-06-04 19:14:32]  scope=mc23_13p6TeV
[2025-06-04 19:14:32]  status=None
[2025-06-04 19:14:32]  status_code=0
[2025-06-04 19:14:32]  storage_token=
[2025-06-04 19:14:32]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667102977/log.44871837._068961.job.log.tgz.1
[2025-06-04 19:14:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/82/log.44871837._068961.job.log.tgz.1
[2025-06-04 19:14:32]  workdir=None
[2025-06-04 19:14:32] ]
[2025-06-04 19:14:32] 2025-06-04 23:14:07,825 | INFO     | transferring file log.44871837._068961.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667102977/log.44871837._068961.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 19:14:32] 2025-06-04 23:14:07,825 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667102977/log.44871837._068961.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._068961.job
[2025-06-04 19:14:32] 2025-06-04 23:14:07,847 | INFO     | adding to output.list: log.44871837._068961.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/82/log.44871837._068961.job.log.tg
[2025-06-04 19:14:32] 2025-06-04 23:14:07,848 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 19:14:32] 2025-06-04 23:14:07,848 | INFO     | summary of transferred files:
[2025-06-04 19:14:32] 2025-06-04 23:14:07,848 | INFO     |  -- lfn=log.44871837._068961.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 19:14:32] 2025-06-04 23:14:07,848 | INFO     | stage-out finished correctly
[2025-06-04 19:14:32] 2025-06-04 23:14:10,201 | WARNING  | process 1654752 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 19:14:32] 2025-06-04 23:14:10,202 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667102977/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:14:32] 2025-06-04 23:14:10,669 | INFO     | number of running child processes to parent process 1654752: 1
[2025-06-04 19:14:32] 2025-06-04 23:14:10,669 | INFO     | maximum number of monitored processes: 6
[2025-06-04 19:14:32] 2025-06-04 23:14:11,189 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 19:14:32] 2025-06-04 23:14:13,172 | INFO     | monitor loop #349: job 0:6667102977 is in state 'finished'
[2025-06-04 19:14:32] 2025-06-04 23:14:13,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:14:32] 2025-06-04 23:14:13,548 | INFO     | job 6667102977 has state=finished
[2025-06-04 19:14:32] 2025-06-04 23:14:13,548 | INFO     | preparing for final server update for job 6667102977 in state='finished'
[2025-06-04 19:14:32] 2025-06-04 23:14:13,549 | INFO     | this job has now completed (state=finished)
[2025-06-04 19:14:32] 2025-06-04 23:14:13,549 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 19:14:32] 2025-06-04 23:14:13,549 | INFO     | log transfer has been attempted: DONE
[2025-06-04 19:14:32] 2025-06-04 23:14:13,549 | INFO     | job 6667102977 has finished - writing final server update
[2025-06-04 19:14:32] 2025-06-04 23:14:13,550 | INFO     | total number of processed events: 400 (read)
[2025-06-04 19:14:32] 2025-06-04 23:14:13,569 | INFO     | executing command: lscpu
[2025-06-04 19:14:32] 2025-06-04 23:14:13,644 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 19:14:32] 2025-06-04 23:14:15,451 | INFO     | 4852s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 19:14:32] 2025-06-04 23:14:15,675 | INFO     | monitor loop #350: job 0:6667102977 is in state 'finished'
[2025-06-04 19:14:32] 2025-06-04 23:14:15,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:14:32] 2025-06-04 23:14:18,010 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 19:14:32] 2025-06-04 23:14:18,010 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667102977/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:14:32] 2025-06-04 23:14:18,011 | INFO     | extracted standard info from prmon json
[2025-06-04 19:14:32] 2025-06-04 23:14:18,011 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:14:32] 2025-06-04 23:14:18,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:14:32] 2025-06-04 23:14:18,012 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:14:32] 2025-06-04 23:14:18,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:14:32] 2025-06-04 23:14:18,013 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:14:32] 2025-06-04 23:14:18,014 | INFO     | sum of square deviations: 115715658.0
[2025-06-04 19:14:32] 2025-06-04 23:14:18,014 | INFO     | sum of deviations: -606594949.4999999
[2025-06-04 19:14:32] 2025-06-04 23:14:18,014 | INFO     | mean x: 1749076505.5
[2025-06-04 19:14:32] 2025-06-04 23:14:18,014 | INFO     | mean y: 2238339.652777778
[2025-06-04 19:14:32] 2025-06-04 23:14:18,014 | INFO     | -- intersect: 9171100988.520996
[2025-06-04 19:14:32] 2025-06-04 23:14:18,014 | INFO     | intersect: 9171100988.520996
[2025-06-04 19:14:32] 2025-06-04 23:14:18,014 | INFO     | chi2: 0.05137712686041184
[2025-06-04 19:14:32] 2025-06-04 23:14:18,015 | INFO     | -- intersect: 9171100988.520996
[2025-06-04 19:14:32] 2025-06-04 23:14:18,015 | INFO     | current memory leak: -5.24 B/s (using 72 data points, chi2=0.05)
[2025-06-04 19:14:32] 2025-06-04 23:14:18,015 | INFO     | ..............................
[2025-06-04 19:14:32] 2025-06-04 23:14:18,015 | INFO     | . Timing measurements:
[2025-06-04 19:14:32] 2025-06-04 23:14:18,015 | INFO     | . get job = 0 s
[2025-06-04 19:14:32] 2025-06-04 23:14:18,015 | INFO     | . initial setup = 3 s
[2025-06-04 19:14:32] 2025-06-04 23:14:18,015 | INFO     | . payload setup = 8 s
[2025-06-04 19:14:32] 2025-06-04 23:14:18,015 | INFO     | . stage-in = 0 s
[2025-06-04 19:14:32] 2025-06-04 23:14:18,016 | INFO     | . payload execution = 4812 s
[2025-06-04 19:14:32] 2025-06-04 23:14:18,016 | INFO     | . stage-out = 0 s
[2025-06-04 19:14:32] 2025-06-04 23:14:18,016 | INFO     | . log creation = 0 s
[2025-06-04 19:14:32] 2025-06-04 23:14:18,016 | INFO     | ..............................
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | 
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | job summary report
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | --------------------------------------------------
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | PanDA job id: 6667102977
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | task id: 44871837
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | errors: (none)
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | pilot state: finished 
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | transexitcode: 0
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | exeerrorcode: 0
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | exeerrordiag: 
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | exitcode: 0
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | exitmsg: OK
[2025-06-04 19:14:32] 2025-06-04 23:14:18,088 | INFO     | cpuconsumptiontime: 36270 s
[2025-06-04 19:14:32] 2025-06-04 23:14:18,089 | INFO     | nevents: 400
[2025-06-04 19:14:32] 2025-06-04 23:14:18,089 | INFO     | neventsw: 0
[2025-06-04 19:14:32] 2025-06-04 23:14:18,089 | INFO     | pid: 1654752
[2025-06-04 19:14:32] 2025-06-04 23:14:18,089 | INFO     | pgrp: 1654752
[2025-06-04 19:14:32] 2025-06-04 23:14:18,089 | INFO     | corecount: 8
[2025-06-04 19:14:32] 2025-06-04 23:14:18,089 | INFO     | event service: False
[2025-06-04 19:14:32] 2025-06-04 23:14:18,089 | INFO     | sizes: {0: 2397221, 1: 2397420, 5: 2397626, 11: 2397682, 4825: 2423640, 4826: 2432581, 4829: 2432765, 4836: 2432935}
[2025-06-04 19:14:32] 2025-06-04 23:14:18,089 | INFO     | --------------------------------------------------
[2025-06-04 19:14:32] 2025-06-04 23:14:18,089 | INFO     | 
[2025-06-04 19:14:32] 2025-06-04 23:14:18,089 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 19:14:32] 2025-06-04 23:14:18,107 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,108 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,108 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,108 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,108 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,108 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,108 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,108 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,108 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,108 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,108 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,108 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,108 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,109 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,109 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,109 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,109 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:14:32] 2025-06-04 23:14:18,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,109 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:14:32] 2025-06-04 23:14:18,109 | INFO     | job 6667102977 has completed (purged errors)
[2025-06-04 19:14:32] 2025-06-04 23:14:18,109 | INFO     | overall cleanup function is called
[2025-06-04 19:14:32] 2025-06-04 23:14:19,117 | INFO     | --- collectZombieJob: --- 10, [1654752]
[2025-06-04 19:14:32] 2025-06-04 23:14:19,118 | INFO     | zombie collector waiting for pid 1654752
[2025-06-04 19:14:32] 2025-06-04 23:14:19,118 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:14:32] 2025-06-04 23:14:19,118 | INFO     | collected zombie processes
[2025-06-04 19:14:32] 2025-06-04 23:14:19,118 | INFO     | will attempt to kill all subprocesses of pid=1654752
[2025-06-04 19:14:32] 2025-06-04 23:14:19,200 | INFO     | PID=1639171 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 19:14:32] 2025-06-04 23:14:19,201 | INFO     | .. there are 59 such processes running
[2025-06-04 19:14:32] 2025-06-04 23:14:19,672 | INFO     | process IDs to be killed: [1654752] (in reverse order)
[2025-06-04 19:14:32] 2025-06-04 23:14:19,857 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:14:32] 2025-06-04 23:14:19,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:14:32] 2025-06-04 23:14:19,883 | INFO     | did not find any defunct processes belonging to 1654752
[2025-06-04 19:14:32] 2025-06-04 23:14:19,909 | INFO     | did not find any defunct processes belonging to 1654752
[2025-06-04 19:14:32] 2025-06-04 23:14:19,910 | INFO     | ready for new job
[2025-06-04 19:14:32] 2025-06-04 23:14:19,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:14:32] 2025-06-04 23:14:19,912 | INFO     | **************************************
[2025-06-04 19:14:32] 2025-06-04 23:14:19,912 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:14:32] 2025-06-04 23:14:19,912 | INFO     | **************************************
[2025-06-04 19:14:32] 2025-06-04 23:14:19,912 | INFO     | 
[2025-06-04 19:14:32] 2025-06-04 23:14:19,916 | INFO     | architecture information:
[2025-06-04 19:14:32] 2025-06-04 23:14:19,917 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:14:32] 2025-06-04 23:14:19,936 | INFO     | cat /etc/os-release:
[2025-06-04 19:14:32] NAME="CentOS Linux"
[2025-06-04 19:14:32] VERSION="7 (Core)"
[2025-06-04 19:14:32] ID="centos"
[2025-06-04 19:14:32] ID_LIKE="rhel fedora"
[2025-06-04 19:14:32] VERSION_ID="7"
[2025-06-04 19:14:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:14:32] ANSI_COLOR="0;31"
[2025-06-04 19:14:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:14:32] HOME_URL="https://www.centos.org/"
[2025-06-04 19:14:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:14:32] 
[2025-06-04 19:14:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:14:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:14:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:14:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:14:32] 
[2025-06-04 19:14:32] 2025-06-04 23:14:19,936 | INFO     | **************************************
[2025-06-04 19:14:32] 2025-06-04 23:14:20,438 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 19:14:32] 2025-06-04 23:14:20,455 | INFO     | sufficient remaining disk space (76599525376 B)
[2025-06-04 19:14:32] 2025-06-04 23:14:20,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:14:32] 2025-06-04 23:14:20,455 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:14:32] 2025-06-04 23:14:20,455 | INFO     | update_server=False
[2025-06-04 19:14:32] 2025-06-04 23:14:20,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:14:32] 2025-06-04 23:14:20,687 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 19:14:32] 2025-06-04 23:14:20,687 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 19:14:32] 2025-06-04 23:14:20,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:14:32] 2025-06-04 23:14:20,687 | INFO     | will abort loop
[2025-06-04 19:14:32] 2025-06-04 23:14:20,691 | INFO     | all data control threads have been joined
[2025-06-04 19:14:32] 2025-06-04 23:14:20,927 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:14:32] 2025-06-04 23:14:21,197 | INFO     | all job control threads have been joined
[2025-06-04 19:14:32] 2025-06-04 23:14:21,207 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:14:32] 2025-06-04 23:14:21,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:14:32] 2025-06-04 23:14:21,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:14:32] 2025-06-04 23:14:21,460 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:21,642 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:21,675 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:21,692 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:21,695 | INFO     | [data] control thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:21,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:14:32] 2025-06-04 23:14:21,898 | INFO     | all payload control threads have been joined
[2025-06-04 19:14:32] 2025-06-04 23:14:22,159 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:22,202 | INFO     | [job] control thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:22,689 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:22,748 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:22,772 | INFO     | [job] validate thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:22,898 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:22,903 | INFO     | [payload] control thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:22,933 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:22,943 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:23,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:14:32] 2025-06-04 23:14:24,103 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:25,777 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:14:32] 2025-06-04 23:14:26,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140486150301504)>', '<ExcThread(monitor, started 140485226133248)>']
[2025-06-04 19:14:32] 2025-06-04 23:14:27,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:14:32] 2025-06-04 23:14:27,237 | INFO     | [monitor] control thread has ended
[2025-06-04 19:14:32] 2025-06-04 23:14:31,495 | INFO     | all workflow threads have been joined
[2025-06-04 19:14:32] 2025-06-04 23:14:31,497 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:14:32] 2025-06-04 23:14:31,498 | INFO     | traces error code: 0
[2025-06-04 19:14:32] 2025-06-04 23:14:31,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:14:32] 2025-06-04 23:14:31,847 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:14:32] 2025-06-04 23:14:31,850 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:14:32] 2025-06-04 23:14:31,853 [wrapper] pilotpid: 1639171
[2025-06-04 19:14:32] 2025-06-04 23:14:31,855 [wrapper] Pilot exit status: 0
[2025-06-04 19:14:32] 2025-06-04 23:14:31,865 [wrapper] pandaids: 6667102977
[2025-06-04 19:14:32] 2025-06-04 23:14:32,000 [wrapper] cleanup supervisor_pilot 2791195 1639172
[2025-06-04 19:14:32] 2025-06-04 23:14:32,006 [wrapper] Test setup, not cleaning
[2025-06-04 19:14:32] 2025-06-04 23:14:32,009 [wrapper] apfmon messages muted
[2025-06-04 19:14:32] 2025-06-04 23:14:32,012 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:14:32] 2025-06-04 23:14:32,014 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:14:32]  *** Error codes and diagnostics ***
[2025-06-04 19:14:32]     "exeErrorCode": 0,
[2025-06-04 19:14:32]     "exeErrorDiag": "",
[2025-06-04 19:14:32]     "pilotErrorCode": 0,
[2025-06-04 19:14:32]     "pilotErrorDiag": "",
[2025-06-04 19:14:32]  *** Listing of results directory ***
[2025-06-04 19:14:32] total 428856
[2025-06-04 19:14:32] -rw-r--r--. 1 boincer umatlas    495897 May 27 09:43 pilot3.tar.gz
[2025-06-04 19:14:32] -rw-r--r--. 1 boincer umatlas      5111 May 27 10:35 queuedata.json
[2025-06-04 19:14:32] -rwx------. 1 boincer umatlas     37140 May 27 10:39 runpilot2-wrapper.sh
[2025-06-04 19:14:32] -rw-r--r--. 1 boincer umatlas       100 Jun  4 17:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:14:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 17:53 run_atlas
[2025-06-04 19:14:32] -rw-r--r--. 1 boincer umatlas       105 Jun  4 17:53 job.xml
[2025-06-04 19:14:32] -rw-r--r--. 2 boincer umatlas 224844910 Jun  4 17:53 EVNT.44871834._002712.pool.root.1
[2025-06-04 19:14:32] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 17:53 start_atlas.sh
[2025-06-04 19:14:32] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 17:53 shared
[2025-06-04 19:14:32] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 17:53 input.tar.gz
[2025-06-04 19:14:32] -rw-r--r--. 1 boincer umatlas         0 Jun  4 17:53 boinc_lockfile
[2025-06-04 19:14:32] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 17:53 pandaJob.out
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas    987032 Jun  4 17:53 agis_schedconf.cvmfs.json
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas   1598969 Jun  4 17:53 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:14:32] drwx------. 4 boincer umatlas      4096 Jun  4 17:53 pilot3
[2025-06-04 19:14:32] -rw-r--r--. 1 boincer umatlas      6932 Jun  4 19:11 init_data.xml
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas        95 Jun  4 19:13 pilot_heartbeat.json
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas 208909881 Jun  4 19:13 HITS.44871837._068961.pool.root.1
[2025-06-04 19:14:32] -rw-r--r--. 1 boincer umatlas       530 Jun  4 19:13 boinc_task_state.xml
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas      1034 Jun  4 19:14 memory_monitor_summary.json
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas    312690 Jun  4 19:14 log.44871837._068961.job.log.tgz.1
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas      7688 Jun  4 19:14 heartbeat.json
[2025-06-04 19:14:32] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 19:14 boinc_mmap_file
[2025-06-04 19:14:32] -rw-r--r--. 1 boincer umatlas        27 Jun  4 19:14 wrapper_checkpoint.txt
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas      4539 Jun  4 19:14 pilotlog.txt
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas    467756 Jun  4 19:14 log.44871837._068961.job.log.1
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas       357 Jun  4 19:14 output.list
[2025-06-04 19:14:32] -rw-r--r--. 1 boincer umatlas       620 Jun  4 19:14 runtime_log
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas    798720 Jun  4 19:14 result.tar.gz
[2025-06-04 19:14:32] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 19:14 runtime_log.err
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas       654 Jun  4 19:14 cSDMDmydAe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSgZKDm0ZLUdn.diag
[2025-06-04 19:14:32] -rw-r--r--. 1 boincer umatlas     21841 Jun  4 19:14 stderr.txt
[2025-06-04 19:14:32] HITS file was successfully produced:
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas 208909881 Jun  4 19:13 shared/HITS.pool.root.1
[2025-06-04 19:14:32]  *** Contents of shared directory: ***
[2025-06-04 19:14:32] total 424896
[2025-06-04 19:14:32] -rw-r--r--. 2 boincer umatlas 224844910 Jun  4 17:53 ATLAS.root_0
[2025-06-04 19:14:32] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 17:53 start_atlas.sh
[2025-06-04 19:14:32] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 17:53 input.tar.gz
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas 208909881 Jun  4 19:13 HITS.pool.root.1
[2025-06-04 19:14:32] -rw-------. 1 boincer umatlas    798720 Jun  4 19:14 result.tar.gz
19:14:33 (1634983): run_atlas exited; CPU time 36493.612694
19:14:33 (1634983): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN