Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:27:47 (1103844): wrapper (7.7.26015): starting
17:27:47 (1103844): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 17:27:47] Arguments: --nthreads 8
[2025-06-04 17:27:47] Threads: 8
[2025-06-04 17:27:47] Checking for CVMFS
[2025-06-04 17:27:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:27:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:27:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:27:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:27:48] 2.12.6.0 7995 1877 164284 146795 0 291 26921346 32935936 6809 16776704 0 19783576 99.947 2099675 33184 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 17:27:48] CVMFS is ok
[2025-06-04 17:27:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:27:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:27:48] Further information can be found at the LHC@home message board.
[2025-06-04 17:27:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:27:48] Checking for apptainer binary...
[2025-06-04 17:27:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:27:48] Running /usr/bin/apptainer --version
[2025-06-04 17:27:48] apptainer version 1.4.1-1.el9
[2025-06-04 17:27:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:27:48] c6-8-25-2.aglt2.org
[2025-06-04 17:27:48] apptainer works
[2025-06-04 17:27:48] Set ATHENA_PROC_NUMBER=8
[2025-06-04 17:27:48] Set ATHENA_CORE_NUMBER=8
[2025-06-04 17:27:48] Starting ATLAS job with PandaID=6666948616
[2025-06-04 17:27:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:32:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:32:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 18:32:28]  is_altstaged=None
[2025-06-04 18:32:28]  is_tar=False
[2025-06-04 18:32:28]  lfn=log.44871837._066269.job.log.tgz.1
[2025-06-04 18:32:28]  mtime=0
[2025-06-04 18:32:28]  protocol_id=None
[2025-06-04 18:32:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 18:32:28]  replicas=None
[2025-06-04 18:32:28]  scope=mc23_13p6TeV
[2025-06-04 18:32:28]  status=None
[2025-06-04 18:32:28]  status_code=0
[2025-06-04 18:32:28]  storage_token=
[2025-06-04 18:32:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666948616/log.44871837._066269.job.log.tgz.1
[2025-06-04 18:32:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/01/log.44871837._066269.job.log.tgz.1
[2025-06-04 18:32:28]  workdir=None
[2025-06-04 18:32:28] ]
[2025-06-04 18:32:28] 2025-06-04 22:32:10,138 | INFO     | transferring file log.44871837._066269.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666948616/log.44871837._066269.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 18:32:28] 2025-06-04 22:32:10,138 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666948616/log.44871837._066269.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._066269.job
[2025-06-04 18:32:28] 2025-06-04 22:32:10,149 | INFO     | adding to output.list: log.44871837._066269.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/01/log.44871837._066269.job.log.tg
[2025-06-04 18:32:28] 2025-06-04 22:32:10,150 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 18:32:28] 2025-06-04 22:32:10,150 | INFO     | summary of transferred files:
[2025-06-04 18:32:28] 2025-06-04 22:32:10,150 | INFO     |  -- lfn=log.44871837._066269.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 18:32:28] 2025-06-04 22:32:10,150 | INFO     | stage-out finished correctly
[2025-06-04 18:32:28] 2025-06-04 22:32:11,269 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 18:32:28] 2025-06-04 22:32:12,934 | WARNING  | process 1125527 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 18:32:28] 2025-06-04 22:32:12,934 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666948616/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:32:28] 2025-06-04 22:32:13,102 | INFO     | number of running child processes to parent process 1125527: 1
[2025-06-04 18:32:28] 2025-06-04 22:32:13,103 | INFO     | maximum number of monitored processes: 6
[2025-06-04 18:32:28] 2025-06-04 22:32:14,044 | INFO     | job 6666948616 has state=finished
[2025-06-04 18:32:28] 2025-06-04 22:32:14,045 | INFO     | preparing for final server update for job 6666948616 in state='finished'
[2025-06-04 18:32:28] 2025-06-04 22:32:14,045 | INFO     | this job has now completed (state=finished)
[2025-06-04 18:32:28] 2025-06-04 22:32:14,045 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 18:32:28] 2025-06-04 22:32:14,045 | INFO     | log transfer has been attempted: DONE
[2025-06-04 18:32:28] 2025-06-04 22:32:14,046 | INFO     | job 6666948616 has finished - writing final server update
[2025-06-04 18:32:28] 2025-06-04 22:32:14,046 | INFO     | total number of processed events: 400 (read)
[2025-06-04 18:32:28] 2025-06-04 22:32:14,063 | INFO     | executing command: lscpu
[2025-06-04 18:32:28] 2025-06-04 22:32:14,125 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 18:32:28] 2025-06-04 22:32:14,992 | INFO     | PID=1107449 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 18:32:28] 2025-06-04 22:32:14,993 | INFO     | .. there are 13 such processes running
[2025-06-04 18:32:28] 2025-06-04 22:32:15,606 | INFO     | monitor loop #292: job 0:6666948616 is in state 'finished'
[2025-06-04 18:32:28] 2025-06-04 22:32:15,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:32:28] 2025-06-04 22:32:16,358 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 18:32:28] 2025-06-04 22:32:16,359 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666948616/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:32:28] 2025-06-04 22:32:16,359 | INFO     | extracted standard info from prmon json
[2025-06-04 18:32:28] 2025-06-04 22:32:16,359 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:32:28] 2025-06-04 22:32:16,359 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:32:28] 2025-06-04 22:32:16,359 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:32:28] 2025-06-04 22:32:16,359 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:32:28] 2025-06-04 22:32:16,360 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:32:28] 2025-06-04 22:32:16,360 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | sum of deviations: -8884896958.5
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | mean x: 1749074476.5
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | mean y: 2482392.375
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | -- intersect: 285470002119.6848
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | intersect: 285470002119.6848
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | chi2: 0.1380885856337025
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | -- intersect: 285470002119.6848
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | current memory leak: -163.21 B/s (using 56 data points, chi2=0.14)
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | ..............................
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | . Timing measurements:
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | . get job = 0 s
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | . initial setup = 2 s
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | . payload setup = 3 s
[2025-06-04 18:32:28] 2025-06-04 22:32:16,361 | INFO     | . stage-in = 0 s
[2025-06-04 18:32:28] 2025-06-04 22:32:16,362 | INFO     | . payload execution = 3833 s
[2025-06-04 18:32:28] 2025-06-04 22:32:16,362 | INFO     | . stage-out = 0 s
[2025-06-04 18:32:28] 2025-06-04 22:32:16,362 | INFO     | . log creation = 0 s
[2025-06-04 18:32:28] 2025-06-04 22:32:16,362 | INFO     | ..............................
[2025-06-04 18:32:28] 2025-06-04 22:32:16,410 | INFO     | 
[2025-06-04 18:32:28] 2025-06-04 22:32:16,410 | INFO     | job summary report
[2025-06-04 18:32:28] 2025-06-04 22:32:16,410 | INFO     | --------------------------------------------------
[2025-06-04 18:32:28] 2025-06-04 22:32:16,410 | INFO     | PanDA job id: 6666948616
[2025-06-04 18:32:28] 2025-06-04 22:32:16,410 | INFO     | task id: 44871837
[2025-06-04 18:32:28] 2025-06-04 22:32:16,410 | INFO     | errors: (none)
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | pilot state: finished 
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | transexitcode: 0
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | exeerrorcode: 0
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | exeerrordiag: 
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | exitcode: 0
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | exitmsg: OK
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | cpuconsumptiontime: 28518 s
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | nevents: 400
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | neventsw: 0
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | pid: 1125527
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | pgrp: 1125527
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | corecount: 8
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | event service: False
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | sizes: {0: 2397392, 3: 2397598, 11: 2397626, 3841: 2423370, 3842: 2432311, 3843: 2432367, 3849: 2432665}
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | --------------------------------------------------
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | 
[2025-06-04 18:32:28] 2025-06-04 22:32:16,411 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 18:32:28] 2025-06-04 22:32:16,422 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,422 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | job 6666948616 has completed (purged errors)
[2025-06-04 18:32:28] 2025-06-04 22:32:16,423 | INFO     | overall cleanup function is called
[2025-06-04 18:32:28] 2025-06-04 22:32:17,430 | INFO     | --- collectZombieJob: --- 10, [1125527]
[2025-06-04 18:32:28] 2025-06-04 22:32:17,430 | INFO     | zombie collector waiting for pid 1125527
[2025-06-04 18:32:28] 2025-06-04 22:32:17,430 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:32:28] 2025-06-04 22:32:17,430 | INFO     | collected zombie processes
[2025-06-04 18:32:28] 2025-06-04 22:32:17,430 | INFO     | will attempt to kill all subprocesses of pid=1125527
[2025-06-04 18:32:28] 2025-06-04 22:32:17,596 | INFO     | process IDs to be killed: [1125527] (in reverse order)
[2025-06-04 18:32:28] 2025-06-04 22:32:17,649 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:32:28] 2025-06-04 22:32:17,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:32:28] 2025-06-04 22:32:17,657 | INFO     | did not find any defunct processes belonging to 1125527
[2025-06-04 18:32:28] 2025-06-04 22:32:17,664 | INFO     | did not find any defunct processes belonging to 1125527
[2025-06-04 18:32:28] 2025-06-04 22:32:17,664 | INFO     | ready for new job
[2025-06-04 18:32:28] 2025-06-04 22:32:17,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:32:28] 2025-06-04 22:32:17,665 | INFO     | **************************************
[2025-06-04 18:32:28] 2025-06-04 22:32:17,665 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:32:28] 2025-06-04 22:32:17,665 | INFO     | **************************************
[2025-06-04 18:32:28] 2025-06-04 22:32:17,665 | INFO     | 
[2025-06-04 18:32:28] 2025-06-04 22:32:17,680 | INFO     | architecture information:
[2025-06-04 18:32:28] 2025-06-04 22:32:17,680 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:32:28] 2025-06-04 22:32:17,688 | INFO     | cat /etc/os-release:
[2025-06-04 18:32:28] NAME="CentOS Linux"
[2025-06-04 18:32:28] VERSION="7 (Core)"
[2025-06-04 18:32:28] ID="centos"
[2025-06-04 18:32:28] ID_LIKE="rhel fedora"
[2025-06-04 18:32:28] VERSION_ID="7"
[2025-06-04 18:32:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:32:28] ANSI_COLOR="0;31"
[2025-06-04 18:32:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:32:28] HOME_URL="https://www.centos.org/"
[2025-06-04 18:32:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:32:28] 
[2025-06-04 18:32:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:32:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:32:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:32:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:32:28] 
[2025-06-04 18:32:28] 2025-06-04 22:32:17,688 | INFO     | **************************************
[2025-06-04 18:32:28] 2025-06-04 22:32:18,191 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 18:32:28] 2025-06-04 22:32:18,199 | INFO     | sufficient remaining disk space (76622594048 B)
[2025-06-04 18:32:28] 2025-06-04 22:32:18,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:32:28] 2025-06-04 22:32:18,200 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:32:28] 2025-06-04 22:32:18,200 | INFO     | update_server=False
[2025-06-04 18:32:28] 2025-06-04 22:32:18,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:32:28] 2025-06-04 22:32:18,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:32:28] 2025-06-04 22:32:18,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:32:28] 2025-06-04 22:32:18,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:32:28] 2025-06-04 22:32:18,862 | INFO     | all payload control threads have been joined
[2025-06-04 18:32:28] 2025-06-04 22:32:18,979 | INFO     | all job control threads have been joined
[2025-06-04 18:32:28] 2025-06-04 22:32:19,004 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:32:28] 2025-06-04 22:32:19,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:32:28] 2025-06-04 22:32:19,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:32:28] 2025-06-04 22:32:19,056 | INFO     | all data control threads have been joined
[2025-06-04 18:32:28] 2025-06-04 22:32:19,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:32:28] 2025-06-04 22:32:19,114 | INFO     | aborting loop
[2025-06-04 18:32:28] 2025-06-04 22:32:19,205 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:19,205 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:19,867 | INFO     | [payload] control thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:19,910 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:19,983 | INFO     | [job] control thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:20,050 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:20,061 | INFO     | [data] control thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:20,120 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:20,152 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:20,210 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:20,338 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:20,390 | INFO     | [job] validate thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:20,421 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:20,494 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:20,721 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:22,206 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:32:28] 2025-06-04 22:32:23,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669089793856)>', '<ExcThread(monitor, started 140668299114240)>']
[2025-06-04 18:32:28] 2025-06-04 22:32:24,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:32:28] 2025-06-04 22:32:24,026 | INFO     | [monitor] control thread has ended
[2025-06-04 18:32:28] 2025-06-04 22:32:28,187 | INFO     | all workflow threads have been joined
[2025-06-04 18:32:28] 2025-06-04 22:32:28,187 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:32:28] 2025-06-04 22:32:28,187 | INFO     | traces error code: 0
[2025-06-04 18:32:28] 2025-06-04 22:32:28,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:32:28] 2025-06-04 22:32:28,308 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:32:28] 2025-06-04 22:32:28,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:32:28] 2025-06-04 22:32:28,311 [wrapper] pilotpid: 1107449
[2025-06-04 18:32:28] 2025-06-04 22:32:28,312 [wrapper] Pilot exit status: 0
[2025-06-04 18:32:28] 2025-06-04 22:32:28,318 [wrapper] pandaids: 6666948616
[2025-06-04 18:32:28] 2025-06-04 22:32:28,355 [wrapper] cleanup supervisor_pilot 1264576 1107450
[2025-06-04 18:32:28] 2025-06-04 22:32:28,356 [wrapper] Test setup, not cleaning
[2025-06-04 18:32:28] 2025-06-04 22:32:28,357 [wrapper] apfmon messages muted
[2025-06-04 18:32:28] 2025-06-04 22:32:28,359 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:32:28] 2025-06-04 22:32:28,360 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:32:28]  *** Error codes and diagnostics ***
[2025-06-04 18:32:28]     "exeErrorCode": 0,
[2025-06-04 18:32:28]     "exeErrorDiag": "",
[2025-06-04 18:32:28]     "pilotErrorCode": 0,
[2025-06-04 18:32:28]     "pilotErrorDiag": "",
[2025-06-04 18:32:28]  *** Listing of results directory ***
[2025-06-04 18:32:28] total 414620
[2025-06-04 18:32:28] -rw-r--r--. 1 boincer umatlas    495897 May 27 06:25 pilot3.tar.gz
[2025-06-04 18:32:28] -rw-r--r--. 1 boincer umatlas      5111 May 27 07:00 queuedata.json
[2025-06-04 18:32:28] -rwx------. 1 boincer umatlas     37140 May 27 07:01 runpilot2-wrapper.sh
[2025-06-04 18:32:28] -rw-r--r--. 1 boincer umatlas       100 Jun  4 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:32:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 17:27 run_atlas
[2025-06-04 18:32:28] -rw-r--r--. 1 boincer umatlas       105 Jun  4 17:27 job.xml
[2025-06-04 18:32:28] -rw-r--r--. 2 boincer umatlas 223028407 Jun  4 17:27 EVNT.44871834._002609.pool.root.1
[2025-06-04 18:32:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 17:27 start_atlas.sh
[2025-06-04 18:32:28] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 17:27 shared
[2025-06-04 18:32:28] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 17:27 input.tar.gz
[2025-06-04 18:32:28] -rw-r--r--. 1 boincer umatlas         0 Jun  4 17:27 boinc_lockfile
[2025-06-04 18:32:28] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 17:27 pandaJob.out
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas    987032 Jun  4 17:27 agis_schedconf.cvmfs.json
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas   1598969 Jun  4 17:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:32:28] drwx------. 4 boincer umatlas      4096 Jun  4 17:27 pilot3
[2025-06-04 18:32:28] -rw-r--r--. 1 boincer umatlas      6852 Jun  4 18:29 init_data.xml
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas 196344117 Jun  4 18:31 HITS.44871837._066269.pool.root.1
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas        95 Jun  4 18:31 pilot_heartbeat.json
[2025-06-04 18:32:28] -rw-r--r--. 1 boincer umatlas       529 Jun  4 18:31 boinc_task_state.xml
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas      1033 Jun  4 18:32 memory_monitor_summary.json
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas    291805 Jun  4 18:32 log.44871837._066269.job.log.tgz.1
[2025-06-04 18:32:28] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 18:32 boinc_mmap_file
[2025-06-04 18:32:28] -rw-r--r--. 1 boincer umatlas        27 Jun  4 18:32 wrapper_checkpoint.txt
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas      7716 Jun  4 18:32 heartbeat.json
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas      4353 Jun  4 18:32 pilotlog.txt
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas    392920 Jun  4 18:32 log.44871837._066269.job.log.1
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas       357 Jun  4 18:32 output.list
[2025-06-04 18:32:28] -rw-r--r--. 1 boincer umatlas       620 Jun  4 18:32 runtime_log
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas    706560 Jun  4 18:32 result.tar.gz
[2025-06-04 18:32:28] -rw-r--r--. 1 boincer umatlas      8664 Jun  4 18:32 runtime_log.err
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas       651 Jun  4 18:32 HYwNDmuE7d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQjRKDmiuRU1m.diag
[2025-06-04 18:32:28] -rw-r--r--. 1 boincer umatlas     21436 Jun  4 18:32 stderr.txt
[2025-06-04 18:32:28] HITS file was successfully produced:
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas 196344117 Jun  4 18:31 shared/HITS.pool.root.1
[2025-06-04 18:32:28]  *** Contents of shared directory: ***
[2025-06-04 18:32:28] total 410756
[2025-06-04 18:32:28] -rw-r--r--. 2 boincer umatlas 223028407 Jun  4 17:27 ATLAS.root_0
[2025-06-04 18:32:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 17:27 start_atlas.sh
[2025-06-04 18:32:28] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 17:27 input.tar.gz
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas 196344117 Jun  4 18:31 HITS.pool.root.1
[2025-06-04 18:32:28] -rw-------. 1 boincer umatlas    706560 Jun  4 18:32 result.tar.gz
18:32:29 (1103844): run_atlas exited; CPU time 28590.719296
18:32:29 (1103844): called boinc_finish(0)

</stderr_txt>
]]>

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