Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:27:42 (3455257): wrapper (7.7.26015): starting
17:27:42 (3455257): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 17:27:42] Arguments: --nthreads 12
[2025-06-04 17:27:42] Threads: 12
[2025-06-04 17:27:42] Checking for CVMFS
[2025-06-04 17:27:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:27:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:27:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:27:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:27:42] 2.12.6.0 5181 1305 113644 146795 3 272 28456996 32935936 7013 16776704 0 5944536 99.694 3995594 29632 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 17:27:42] CVMFS is ok
[2025-06-04 17:27:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:27:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:27:42] Further information can be found at the LHC@home message board.
[2025-06-04 17:27:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:27:42] Checking for apptainer binary...
[2025-06-04 17:27:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:27:42] Running /usr/bin/apptainer --version
[2025-06-04 17:27:42] apptainer version 1.4.1-1.el9
[2025-06-04 17:27:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:27:42] c6-1-24-3.aglt2.org
[2025-06-04 17:27:42] apptainer works
[2025-06-04 17:27:42] Set ATHENA_PROC_NUMBER=12
[2025-06-04 17:27:42] Set ATHENA_CORE_NUMBER=12
[2025-06-04 17:27:42] Starting ATLAS job with PandaID=6680065312
[2025-06-04 17:27:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:17:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:17:41]  is_altstaged=None
[2025-06-04 18:17:41]  is_tar=False
[2025-06-04 18:17:41]  lfn=log.45006595._056940.job.log.tgz.1
[2025-06-04 18:17:41]  mtime=0
[2025-06-04 18:17:41]  protocol_id=None
[2025-06-04 18:17:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 18:17:41]  replicas=None
[2025-06-04 18:17:41]  scope=mc23_13p6TeV
[2025-06-04 18:17:41]  status=None
[2025-06-04 18:17:41]  status_code=0
[2025-06-04 18:17:41]  storage_token=
[2025-06-04 18:17:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6680065312/log.45006595._056940.job.log.tgz.1
[2025-06-04 18:17:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/77/log.45006595._056940.job.log.tgz.1
[2025-06-04 18:17:41]  workdir=None
[2025-06-04 18:17:41] ]
[2025-06-04 18:17:41] 2025-06-04 22:17:15,187 | INFO     | transferring file log.45006595._056940.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6680065312/log.45006595._056940.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 18:17:41] 2025-06-04 22:17:15,189 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6680065312/log.45006595._056940.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056940.job
[2025-06-04 18:17:41] 2025-06-04 22:17:15,207 | INFO     | adding to output.list: log.45006595._056940.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/77/log.45006595._056940.job.log.tg
[2025-06-04 18:17:41] 2025-06-04 22:17:15,209 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 18:17:41] 2025-06-04 22:17:15,209 | INFO     | summary of transferred files:
[2025-06-04 18:17:41] 2025-06-04 22:17:15,209 | INFO     |  -- lfn=log.45006595._056940.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 18:17:41] 2025-06-04 22:17:15,210 | INFO     | stage-out finished correctly
[2025-06-04 18:17:41] 2025-06-04 22:17:17,845 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 18:17:41] 2025-06-04 22:17:18,331 | WARNING  | process 3465934 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 18:17:41] 2025-06-04 22:17:18,331 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680065312/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:17:41] 2025-06-04 22:17:18,565 | INFO     | number of running child processes to parent process 3465934: 1
[2025-06-04 18:17:41] 2025-06-04 22:17:18,565 | INFO     | maximum number of monitored processes: 6
[2025-06-04 18:17:41] 2025-06-04 22:17:19,080 | INFO     | job 6680065312 has state=finished
[2025-06-04 18:17:41] 2025-06-04 22:17:19,081 | INFO     | preparing for final server update for job 6680065312 in state='finished'
[2025-06-04 18:17:41] 2025-06-04 22:17:19,081 | INFO     | this job has now completed (state=finished)
[2025-06-04 18:17:41] 2025-06-04 22:17:19,081 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 18:17:41] 2025-06-04 22:17:19,082 | INFO     | log transfer has been attempted: DONE
[2025-06-04 18:17:41] 2025-06-04 22:17:19,082 | INFO     | job 6680065312 has finished - writing final server update
[2025-06-04 18:17:41] 2025-06-04 22:17:19,082 | INFO     | total number of processed events: 400 (read)
[2025-06-04 18:17:41] 2025-06-04 22:17:19,098 | INFO     | executing command: lscpu
[2025-06-04 18:17:41] 2025-06-04 22:17:19,175 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 18:17:41] 2025-06-04 22:17:21,067 | INFO     | monitor loop #224: job 0:6680065312 is in state 'finished'
[2025-06-04 18:17:41] 2025-06-04 22:17:21,068 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:17:41] 2025-06-04 22:17:23,208 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 18:17:41] 2025-06-04 22:17:23,209 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680065312/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:17:41] 2025-06-04 22:17:23,210 | INFO     | extracted standard info from prmon json
[2025-06-04 18:17:41] 2025-06-04 22:17:23,210 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:17:41] 2025-06-04 22:17:23,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:17:41] 2025-06-04 22:17:23,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:17:41] 2025-06-04 22:17:23,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:17:41] 2025-06-04 22:17:23,214 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:17:41] 2025-06-04 22:17:23,215 | INFO     | sum of square deviations: 22960430.5
[2025-06-04 18:17:41] 2025-06-04 22:17:23,215 | INFO     | sum of deviations: -3262652923.5
[2025-06-04 18:17:41] 2025-06-04 22:17:23,215 | INFO     | mean x: 1749074052.5
[2025-06-04 18:17:41] 2025-06-04 22:17:23,215 | INFO     | mean y: 2723382.785714286
[2025-06-04 18:17:41] 2025-06-04 22:17:23,216 | INFO     | -- intersect: 248544298890.57584
[2025-06-04 18:17:41] 2025-06-04 22:17:23,216 | INFO     | intersect: 248544298890.57584
[2025-06-04 18:17:41] 2025-06-04 22:17:23,216 | INFO     | chi2: 0.10617031035721591
[2025-06-04 18:17:41] 2025-06-04 22:17:23,216 | INFO     | -- intersect: 248544298890.57584
[2025-06-04 18:17:41] 2025-06-04 22:17:23,216 | INFO     | current memory leak: -142.10 B/s (using 42 data points, chi2=0.11)
[2025-06-04 18:17:41] 2025-06-04 22:17:23,217 | INFO     | ..............................
[2025-06-04 18:17:41] 2025-06-04 22:17:23,217 | INFO     | . Timing measurements:
[2025-06-04 18:17:41] 2025-06-04 22:17:23,217 | INFO     | . get job = 0 s
[2025-06-04 18:17:41] 2025-06-04 22:17:23,218 | INFO     | . initial setup = 2 s
[2025-06-04 18:17:41] 2025-06-04 22:17:23,218 | INFO     | . payload setup = 6 s
[2025-06-04 18:17:41] 2025-06-04 22:17:23,218 | INFO     | . stage-in = 0 s
[2025-06-04 18:17:41] 2025-06-04 22:17:23,218 | INFO     | . payload execution = 2936 s
[2025-06-04 18:17:41] 2025-06-04 22:17:23,218 | INFO     | . stage-out = 0 s
[2025-06-04 18:17:41] 2025-06-04 22:17:23,218 | INFO     | . log creation = 0 s
[2025-06-04 18:17:41] 2025-06-04 22:17:23,218 | INFO     | ..............................
[2025-06-04 18:17:41] 2025-06-04 22:17:23,269 | INFO     | 
[2025-06-04 18:17:41] 2025-06-04 22:17:23,269 | INFO     | job summary report
[2025-06-04 18:17:41] 2025-06-04 22:17:23,269 | INFO     | --------------------------------------------------
[2025-06-04 18:17:41] 2025-06-04 22:17:23,269 | INFO     | PanDA job id: 6680065312
[2025-06-04 18:17:41] 2025-06-04 22:17:23,269 | INFO     | task id: 45006595
[2025-06-04 18:17:41] 2025-06-04 22:17:23,269 | INFO     | errors: (none)
[2025-06-04 18:17:41] 2025-06-04 22:17:23,269 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | pilot state: finished 
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | transexitcode: 0
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | exeerrorcode: 0
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | exeerrordiag: 
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | exitcode: 0
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | exitmsg: OK
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | cpuconsumptiontime: 31373 s
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | nevents: 400
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | neventsw: 0
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | pid: 3465934
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | pgrp: 3465934
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | corecount: 12
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | event service: False
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | sizes: {0: 2397291, 4: 2397497, 11: 2397525, 2946: 2422882, 2948: 2431823, 2951: 2431879, 2956: 2432177}
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | --------------------------------------------------
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | 
[2025-06-04 18:17:41] 2025-06-04 22:17:23,270 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 18:17:41] 2025-06-04 22:17:23,284 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,284 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,285 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,285 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,285 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,285 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,285 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,285 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,285 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,285 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,285 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,286 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,286 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,286 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,286 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,286 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,286 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,286 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:17:41] 2025-06-04 22:17:23,286 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,286 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:17:41] 2025-06-04 22:17:23,287 | INFO     | job 6680065312 has completed (purged errors)
[2025-06-04 18:17:41] 2025-06-04 22:17:23,287 | INFO     | overall cleanup function is called
[2025-06-04 18:17:41] 2025-06-04 22:17:24,295 | INFO     | --- collectZombieJob: --- 10, [3465934]
[2025-06-04 18:17:41] 2025-06-04 22:17:24,296 | INFO     | zombie collector waiting for pid 3465934
[2025-06-04 18:17:41] 2025-06-04 22:17:24,296 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:17:41] 2025-06-04 22:17:24,296 | INFO     | collected zombie processes
[2025-06-04 18:17:41] 2025-06-04 22:17:24,296 | INFO     | will attempt to kill all subprocesses of pid=3465934
[2025-06-04 18:17:41] 2025-06-04 22:17:24,536 | INFO     | process IDs to be killed: [3465934] (in reverse order)
[2025-06-04 18:17:41] 2025-06-04 22:17:24,615 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:17:41] 2025-06-04 22:17:24,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:17:41] 2025-06-04 22:17:24,626 | INFO     | did not find any defunct processes belonging to 3465934
[2025-06-04 18:17:41] 2025-06-04 22:17:24,635 | INFO     | did not find any defunct processes belonging to 3465934
[2025-06-04 18:17:41] 2025-06-04 22:17:24,635 | INFO     | ready for new job
[2025-06-04 18:17:41] 2025-06-04 22:17:24,636 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:17:41] 2025-06-04 22:17:24,638 | INFO     | **************************************
[2025-06-04 18:17:41] 2025-06-04 22:17:24,638 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:17:41] 2025-06-04 22:17:24,638 | INFO     | **************************************
[2025-06-04 18:17:41] 2025-06-04 22:17:24,638 | INFO     | 
[2025-06-04 18:17:41] 2025-06-04 22:17:24,654 | INFO     | architecture information:
[2025-06-04 18:17:41] 2025-06-04 22:17:24,655 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:17:41] 2025-06-04 22:17:24,672 | INFO     | cat /etc/os-release:
[2025-06-04 18:17:41] NAME="CentOS Linux"
[2025-06-04 18:17:41] VERSION="7 (Core)"
[2025-06-04 18:17:41] ID="centos"
[2025-06-04 18:17:41] ID_LIKE="rhel fedora"
[2025-06-04 18:17:41] VERSION_ID="7"
[2025-06-04 18:17:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:17:41] ANSI_COLOR="0;31"
[2025-06-04 18:17:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:17:41] HOME_URL="https://www.centos.org/"
[2025-06-04 18:17:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:17:41] 
[2025-06-04 18:17:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:17:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:17:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:17:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:17:41] 
[2025-06-04 18:17:41] 2025-06-04 22:17:24,672 | INFO     | **************************************
[2025-06-04 18:17:41] 2025-06-04 22:17:25,175 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 18:17:41] 2025-06-04 22:17:25,191 | INFO     | sufficient remaining disk space (76378275840 B)
[2025-06-04 18:17:41] 2025-06-04 22:17:25,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:17:41] 2025-06-04 22:17:25,192 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:17:41] 2025-06-04 22:17:25,192 | INFO     | update_server=False
[2025-06-04 18:17:41] 2025-06-04 22:17:25,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:17:41] 2025-06-04 22:17:25,192 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:17:41] 2025-06-04 22:17:25,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:17:41] 2025-06-04 22:17:25,193 | INFO     | aborting loop
[2025-06-04 18:17:41] 2025-06-04 22:17:25,833 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:17:41] 2025-06-04 22:17:25,877 | INFO     | all data control threads have been joined
[2025-06-04 18:17:41] 2025-06-04 22:17:25,916 | INFO     | all payload control threads have been joined
[2025-06-04 18:17:41] 2025-06-04 22:17:26,197 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:26,198 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:26,199 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:26,279 | INFO     | PID=3458912 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 18:17:41] 2025-06-04 22:17:26,280 | INFO     | .. there are 8 such processes running
[2025-06-04 18:17:41] 2025-06-04 22:17:26,280 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:17:41] 2025-06-04 22:17:26,280 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:17:41] 2025-06-04 22:17:26,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:17:41] 2025-06-04 22:17:26,390 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:26,660 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:26,787 | INFO     | all job control threads have been joined
[2025-06-04 18:17:41] 2025-06-04 22:17:26,883 | INFO     | [data] control thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:26,920 | INFO     | [payload] control thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:27,114 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:27,167 | INFO     | [job] validate thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:27,325 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:27,339 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:27,398 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:27,792 | INFO     | [job] control thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:27,838 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:28,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:17:41] 2025-06-04 22:17:32,439 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:35,361 | INFO     | job.realtimelogging is not enabled
[2025-06-04 18:17:41] 2025-06-04 22:17:36,366 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:17:41] 2025-06-04 22:17:36,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599258810176)>', '<ExcThread(monitor, started 140598640113408)>']
[2025-06-04 18:17:41] 2025-06-04 22:17:37,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:17:41] 2025-06-04 22:17:37,334 | INFO     | [monitor] control thread has ended
[2025-06-04 18:17:41] 2025-06-04 22:17:41,449 | INFO     | all workflow threads have been joined
[2025-06-04 18:17:41] 2025-06-04 22:17:41,449 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:17:41] 2025-06-04 22:17:41,450 | INFO     | traces error code: 0
[2025-06-04 18:17:41] 2025-06-04 22:17:41,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:17:41] 2025-06-04 22:17:41,632 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:17:41] 2025-06-04 22:17:41,636 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:17:41] 2025-06-04 22:17:41,639 [wrapper] pilotpid: 3458912
[2025-06-04 18:17:41] 2025-06-04 22:17:41,642 [wrapper] Pilot exit status: 0
[2025-06-04 18:17:41] 2025-06-04 22:17:41,652 [wrapper] pandaids: 6680065312
[2025-06-04 18:17:41] 2025-06-04 22:17:41,694 [wrapper] cleanup supervisor_pilot 3538093 3458913
[2025-06-04 18:17:41] 2025-06-04 22:17:41,696 [wrapper] Test setup, not cleaning
[2025-06-04 18:17:41] 2025-06-04 22:17:41,700 [wrapper] apfmon messages muted
[2025-06-04 18:17:41] 2025-06-04 22:17:41,703 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:17:41] 2025-06-04 22:17:41,706 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:17:41]  *** Error codes and diagnostics ***
[2025-06-04 18:17:41]     "exeErrorCode": 0,
[2025-06-04 18:17:41]     "exeErrorDiag": "",
[2025-06-04 18:17:41]     "pilotErrorCode": 0,
[2025-06-04 18:17:41]     "pilotErrorDiag": "",
[2025-06-04 18:17:41]  *** Listing of results directory ***
[2025-06-04 18:17:41] total 388288
[2025-06-04 18:17:41] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 17:19 pilot3.tar.gz
[2025-06-04 18:17:41] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 17:25 queuedata.json
[2025-06-04 18:17:41] -rwx------. 1 boincer umatlas     37140 Jun  4 17:27 runpilot2-wrapper.sh
[2025-06-04 18:17:41] -rw-r--r--. 1 boincer umatlas       100 Jun  4 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:17:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 17:27 run_atlas
[2025-06-04 18:17:41] -rw-r--r--. 1 boincer umatlas       105 Jun  4 17:27 job.xml
[2025-06-04 18:17:41] -rw-r--r--. 2 boincer umatlas 216700930 Jun  4 17:27 EVNT.45006593._001877.pool.root.1
[2025-06-04 18:17:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 17:27 start_atlas.sh
[2025-06-04 18:17:41] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 17:27 shared
[2025-06-04 18:17:41] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 17:27 input.tar.gz
[2025-06-04 18:17:41] -rw-r--r--. 1 boincer umatlas         0 Jun  4 17:27 boinc_lockfile
[2025-06-04 18:17:41] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 17:27 pandaJob.out
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas    987032 Jun  4 17:27 agis_schedconf.cvmfs.json
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas   1598969 Jun  4 17:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:17:41] drwx------. 4 boincer umatlas      4096 Jun  4 17:27 pilot3
[2025-06-04 18:17:41] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 18:10 init_data.xml
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas        95 Jun  4 18:16 pilot_heartbeat.json
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas 175744086 Jun  4 18:16 HITS.45006595._056940.pool.root.1
[2025-06-04 18:17:41] -rw-r--r--. 1 boincer umatlas       530 Jun  4 18:16 boinc_task_state.xml
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas      1028 Jun  4 18:17 memory_monitor_summary.json
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas    351305 Jun  4 18:17 log.45006595._056940.job.log.tgz.1
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas      7711 Jun  4 18:17 heartbeat.json
[2025-06-04 18:17:41] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 18:17 boinc_mmap_file
[2025-06-04 18:17:41] -rw-r--r--. 1 boincer umatlas        27 Jun  4 18:17 wrapper_checkpoint.txt
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas      4820 Jun  4 18:17 pilotlog.txt
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas    314125 Jun  4 18:17 log.45006595._056940.job.log.1
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas       357 Jun  4 18:17 output.list
[2025-06-04 18:17:41] -rw-r--r--. 1 boincer umatlas       620 Jun  4 18:17 runtime_log
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas    686080 Jun  4 18:17 result.tar.gz
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas       654 Jun  4 18:17 ZTfKDmpoAh7n9Rq4apOajLDm4fhM0noT9bVof3QYDmK4aKDmxtFiun.diag
[2025-06-04 18:17:41] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 18:17 runtime_log.err
[2025-06-04 18:17:41] -rw-r--r--. 1 boincer umatlas     21468 Jun  4 18:17 stderr.txt
[2025-06-04 18:17:41] HITS file was successfully produced:
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas 175744086 Jun  4 18:16 shared/HITS.pool.root.1
[2025-06-04 18:17:41]  *** Contents of shared directory: ***
[2025-06-04 18:17:41] total 384444
[2025-06-04 18:17:41] -rw-r--r--. 2 boincer umatlas 216700930 Jun  4 17:27 ATLAS.root_0
[2025-06-04 18:17:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 17:27 start_atlas.sh
[2025-06-04 18:17:41] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 17:27 input.tar.gz
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas 175744086 Jun  4 18:16 HITS.pool.root.1
[2025-06-04 18:17:41] -rw-------. 1 boincer umatlas    686080 Jun  4 18:17 result.tar.gz
18:17:42 (3455257): run_atlas exited; CPU time 31395.915039
18:17:42 (3455257): called boinc_finish(0)

</stderr_txt>
]]>

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