Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:13:33 (3064036): wrapper (7.7.26015): starting
17:13:33 (3064036): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 17:13:33] Arguments: --nthreads 10
[2025-06-04 17:13:33] Threads: 10
[2025-06-04 17:13:33] Checking for CVMFS
[2025-06-04 17:13:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:13:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:13:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:13:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:13:33] 2.12.6.0 9586 1862 180268 146793 0 311 31481878 32935936 17062 16776704 0 7643147 99.626 6018776 33227 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 17:13:33] CVMFS is ok
[2025-06-04 17:13:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:13:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:13:33] Further information can be found at the LHC@home message board.
[2025-06-04 17:13:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:13:33] Checking for apptainer binary...
[2025-06-04 17:13:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:13:33] Running /usr/bin/apptainer --version
[2025-06-04 17:13:34] apptainer version 1.4.1-1.el9
[2025-06-04 17:13:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:13:34] c-8-36.aglt2.org
[2025-06-04 17:13:34] apptainer works
[2025-06-04 17:13:34] Set ATHENA_PROC_NUMBER=10
[2025-06-04 17:13:34] Set ATHENA_CORE_NUMBER=10
[2025-06-04 17:13:34] Starting ATLAS job with PandaID=6668439432
[2025-06-04 17:13:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:01:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:01:46] 2025-06-05 00:01:21,442 | INFO     | log transfer has been attempted: DONE
[2025-06-04 20:01:46] 2025-06-05 00:01:21,442 | INFO     | job 6668439432 has finished - writing final server update
[2025-06-04 20:01:46] 2025-06-05 00:01:21,442 | INFO     | total number of processed events: 400 (read)
[2025-06-04 20:01:46] 2025-06-05 00:01:21,456 | INFO     | executing command: lscpu
[2025-06-04 20:01:46] 2025-06-05 00:01:21,515 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 20:01:46] 2025-06-05 00:01:23,586 | INFO     | monitor loop #699: job 0:6668439432 is in state 'finished'
[2025-06-04 20:01:46] 2025-06-05 00:01:23,586 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:01:46] 2025-06-05 00:01:25,656 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 20:01:46] 2025-06-05 00:01:25,658 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668439432/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:01:46] 2025-06-05 00:01:25,660 | INFO     | extracted standard info from prmon json
[2025-06-04 20:01:46] 2025-06-05 00:01:25,660 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:01:46] 2025-06-05 00:01:25,660 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:01:46] 2025-06-05 00:01:25,661 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:01:46] 2025-06-05 00:01:25,661 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:01:46] 2025-06-05 00:01:25,665 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:01:46] 2025-06-05 00:01:25,666 | INFO     | sum of square deviations: 1392958685.248484
[2025-06-04 20:01:46] 2025-06-05 00:01:25,667 | INFO     | sum of deviations: -38789120103.32727
[2025-06-04 20:01:46] 2025-06-05 00:01:25,667 | INFO     | mean x: 1749076658.1030302
[2025-06-04 20:01:46] 2025-06-05 00:01:25,667 | INFO     | mean y: 2342878.2545454544
[2025-06-04 20:01:46] 2025-06-05 00:01:25,667 | INFO     | -- intersect: 48708126674.69365
[2025-06-04 20:01:46] 2025-06-05 00:01:25,667 | INFO     | intersect: 48708126674.69365
[2025-06-04 20:01:46] 2025-06-05 00:01:25,668 | INFO     | chi2: 2.726946760208582
[2025-06-04 20:01:46] 2025-06-05 00:01:25,668 | INFO     | sum of square deviations: 1270123838.4000013
[2025-06-04 20:01:46] 2025-06-05 00:01:25,669 | INFO     | sum of deviations: -26480503988.399998
[2025-06-04 20:01:46] 2025-06-05 00:01:25,669 | INFO     | mean x: 1749076505.6
[2025-06-04 20:01:46] 2025-06-05 00:01:25,669 | INFO     | mean y: 2357866.86875
[2025-06-04 20:01:46] 2025-06-05 00:01:25,669 | INFO     | -- intersect: 36468429900.36684
[2025-06-04 20:01:46] 2025-06-05 00:01:25,669 | INFO     | intersect: 36468429900.36684
[2025-06-04 20:01:46] 2025-06-05 00:01:25,670 | INFO     | chi2: 2.0743997401357377
[2025-06-04 20:01:46] 2025-06-05 00:01:25,670 | INFO     | current chi2=2.0743997401357377 (change=23.929584163312807 %)
[2025-06-04 20:01:46] 2025-06-05 00:01:25,670 | INFO     | right removable region: 159
[2025-06-04 20:01:46] 2025-06-05 00:01:25,670 | INFO     | sum of square deviations: 1270123290.1937554
[2025-06-04 20:01:46] 2025-06-05 00:01:25,671 | INFO     | sum of deviations: -64661274040.012505
[2025-06-04 20:01:46] 2025-06-05 00:01:25,671 | INFO     | mean x: 1749076810.60625
[2025-06-04 20:01:46] 2025-06-05 00:01:25,671 | INFO     | mean y: 2374652.4125
[2025-06-04 20:01:46] 2025-06-05 00:01:25,671 | INFO     | -- intersect: 89046907447.64133
[2025-06-04 20:01:46] 2025-06-05 00:01:25,672 | INFO     | intersect: 89046907447.64133
[2025-06-04 20:01:46] 2025-06-05 00:01:25,672 | INFO     | chi2: 1.1046961360311374
[2025-06-04 20:01:46] 2025-06-05 00:01:25,672 | INFO     | current chi2=1.1046961360311374 (change=59.48963316223159 %)
[2025-06-04 20:01:46] 2025-06-05 00:01:25,672 | INFO     | sum of square deviations: 1154729895.1354902
[2025-06-04 20:01:46] 2025-06-05 00:01:25,673 | INFO     | sum of deviations: -61740425385.41289
[2025-06-04 20:01:46] 2025-06-05 00:01:25,673 | INFO     | mean x: 1749076963.1096773
[2025-06-04 20:01:46] 2025-06-05 00:01:25,674 | INFO     | mean y: 2370713.141935484
[2025-06-04 20:01:46] 2025-06-05 00:01:25,674 | INFO     | -- intersect: 93520998912.81001
[2025-06-04 20:01:46] 2025-06-05 00:01:25,674 | INFO     | intersect: 93520998912.81001
[2025-06-04 20:01:46] 2025-06-05 00:01:25,674 | INFO     | chi2: 1.073952086003502
[2025-06-04 20:01:46] 2025-06-05 00:01:25,674 | INFO     | current chi2=1.073952086003502 (change=2.783032276920077 %)
[2025-06-04 20:01:46] 2025-06-05 00:01:25,674 | INFO     | left removable region: 20
[2025-06-04 20:01:46] 2025-06-05 00:01:25,675 | INFO     | sum of square deviations: 832776164.1582756
[2025-06-04 20:01:46] 2025-06-05 00:01:25,675 | INFO     | sum of deviations: -36661420476.964035
[2025-06-04 20:01:46] 2025-06-05 00:01:25,676 | INFO     | mean x: 1749077085.115108
[2025-06-04 20:01:46] 2025-06-05 00:01:25,676 | INFO     | mean y: 2368300.9352517985
[2025-06-04 20:01:46] 2025-06-05 00:01:25,676 | INFO     | -- intersect: 77002231197.87617
[2025-06-04 20:01:46] 2025-06-05 00:01:25,676 | INFO     | intersect: 77002231197.87617
[2025-06-04 20:01:46] 2025-06-05 00:01:25,676 | INFO     | chi2: 0.3731472082297564
[2025-06-04 20:01:46] 2025-06-05 00:01:25,676 | INFO     | -- intersect: 77002231197.87617
[2025-06-04 20:01:46] 2025-06-05 00:01:25,677 | INFO     | current memory leak: -44.02 B/s (using 139 data points, chi2=0.37)
[2025-06-04 20:01:46] 2025-06-05 00:01:25,677 | INFO     | ..............................
[2025-06-04 20:01:46] 2025-06-05 00:01:25,677 | INFO     | . Timing measurements:
[2025-06-04 20:01:46] 2025-06-05 00:01:25,678 | INFO     | . get job = 0 s
[2025-06-04 20:01:46] 2025-06-05 00:01:25,678 | INFO     | . initial setup = 3 s
[2025-06-04 20:01:46] 2025-06-05 00:01:25,678 | INFO     | . payload setup = 10 s
[2025-06-04 20:01:46] 2025-06-05 00:01:25,678 | INFO     | . stage-in = 0 s
[2025-06-04 20:01:46] 2025-06-05 00:01:25,678 | INFO     | . payload execution = 10024 s
[2025-06-04 20:01:46] 2025-06-05 00:01:25,678 | INFO     | . stage-out = 0 s
[2025-06-04 20:01:46] 2025-06-05 00:01:25,678 | INFO     | . log creation = 0 s
[2025-06-04 20:01:46] 2025-06-05 00:01:25,678 | INFO     | ..............................
[2025-06-04 20:01:46] 2025-06-05 00:01:25,791 | INFO     | 
[2025-06-04 20:01:46] 2025-06-05 00:01:25,791 | INFO     | job summary report
[2025-06-04 20:01:46] 2025-06-05 00:01:25,791 | INFO     | --------------------------------------------------
[2025-06-04 20:01:46] 2025-06-05 00:01:25,791 | INFO     | PanDA job id: 6668439432
[2025-06-04 20:01:46] 2025-06-05 00:01:25,791 | INFO     | task id: 44871837
[2025-06-04 20:01:46] 2025-06-05 00:01:25,791 | INFO     | errors: (none)
[2025-06-04 20:01:46] 2025-06-05 00:01:25,791 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:01:46] 2025-06-05 00:01:25,791 | INFO     | pilot state: finished 
[2025-06-04 20:01:46] 2025-06-05 00:01:25,792 | INFO     | transexitcode: 0
[2025-06-04 20:01:46] 2025-06-05 00:01:25,792 | INFO     | exeerrorcode: 0
[2025-06-04 20:01:46] 2025-06-05 00:01:25,792 | INFO     | exeerrordiag: 
[2025-06-04 20:01:46] 2025-06-05 00:01:25,792 | INFO     | exitcode: 0
[2025-06-04 20:01:46] 2025-06-05 00:01:25,792 | INFO     | exitmsg: OK
[2025-06-04 20:01:46] 2025-06-05 00:01:25,792 | INFO     | cpuconsumptiontime: 61581 s
[2025-06-04 20:01:46] 2025-06-05 00:01:25,792 | INFO     | nevents: 400
[2025-06-04 20:01:46] 2025-06-05 00:01:25,792 | INFO     | neventsw: 0
[2025-06-04 20:01:46] 2025-06-05 00:01:25,792 | INFO     | pid: 3074420
[2025-06-04 20:01:46] 2025-06-05 00:01:25,792 | INFO     | pgrp: 3074420
[2025-06-04 20:01:46] 2025-06-05 00:01:25,792 | INFO     | corecount: 10
[2025-06-04 20:01:46] 2025-06-05 00:01:25,792 | INFO     | event service: False
[2025-06-04 20:01:46] 2025-06-05 00:01:25,793 | INFO     | sizes: {0: 2397220, 1: 2397419, 5: 2397625, 12: 2397681, 10037: 2426105, 10038: 2426104, 10039: 2435229, 10040: 2435285, 10045: 2435455}
[2025-06-04 20:01:46] 2025-06-05 00:01:25,793 | INFO     | --------------------------------------------------
[2025-06-04 20:01:46] 2025-06-05 00:01:25,793 | INFO     | 
[2025-06-04 20:01:46] 2025-06-05 00:01:25,793 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 20:01:46] 2025-06-05 00:01:25,814 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,815 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,815 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,815 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,816 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,817 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,817 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:01:46] 2025-06-05 00:01:25,817 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,817 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:01:46] 2025-06-05 00:01:25,817 | INFO     | job 6668439432 has completed (purged errors)
[2025-06-04 20:01:46] 2025-06-05 00:01:25,817 | INFO     | overall cleanup function is called
[2025-06-04 20:01:46] 2025-06-05 00:01:26,826 | INFO     | --- collectZombieJob: --- 10, [3074420]
[2025-06-04 20:01:46] 2025-06-05 00:01:26,826 | INFO     | zombie collector waiting for pid 3074420
[2025-06-04 20:01:46] 2025-06-05 00:01:26,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:01:46] 2025-06-05 00:01:26,826 | INFO     | collected zombie processes
[2025-06-04 20:01:46] 2025-06-05 00:01:26,826 | INFO     | will attempt to kill all subprocesses of pid=3074420
[2025-06-04 20:01:46] 2025-06-05 00:01:27,227 | INFO     | process IDs to be killed: [3074420] (in reverse order)
[2025-06-04 20:01:46] 2025-06-05 00:01:27,303 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:01:46] 2025-06-05 00:01:27,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:01:46] 2025-06-05 00:01:27,318 | INFO     | did not find any defunct processes belonging to 3074420
[2025-06-04 20:01:46] 2025-06-05 00:01:27,333 | INFO     | did not find any defunct processes belonging to 3074420
[2025-06-04 20:01:46] 2025-06-05 00:01:27,333 | INFO     | ready for new job
[2025-06-04 20:01:46] 2025-06-05 00:01:27,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:01:46] 2025-06-05 00:01:27,335 | INFO     | **************************************
[2025-06-04 20:01:46] 2025-06-05 00:01:27,336 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:01:46] 2025-06-05 00:01:27,336 | INFO     | **************************************
[2025-06-04 20:01:46] 2025-06-05 00:01:27,336 | INFO     | 
[2025-06-04 20:01:46] 2025-06-05 00:01:27,349 | INFO     | architecture information:
[2025-06-04 20:01:46] 2025-06-05 00:01:27,350 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:01:46] 2025-06-05 00:01:27,364 | INFO     | cat /etc/os-release:
[2025-06-04 20:01:46] NAME="CentOS Linux"
[2025-06-04 20:01:46] VERSION="7 (Core)"
[2025-06-04 20:01:46] ID="centos"
[2025-06-04 20:01:46] ID_LIKE="rhel fedora"
[2025-06-04 20:01:46] VERSION_ID="7"
[2025-06-04 20:01:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:01:46] ANSI_COLOR="0;31"
[2025-06-04 20:01:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:01:46] HOME_URL="https://www.centos.org/"
[2025-06-04 20:01:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:01:46] 
[2025-06-04 20:01:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:01:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:01:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:01:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:01:46] 
[2025-06-04 20:01:46] 2025-06-05 00:01:27,365 | INFO     | **************************************
[2025-06-04 20:01:46] 2025-06-05 00:01:27,867 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 20:01:46] 2025-06-05 00:01:27,887 | INFO     | sufficient remaining disk space (76554436608 B)
[2025-06-04 20:01:46] 2025-06-05 00:01:27,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:01:46] 2025-06-05 00:01:27,888 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:01:46] 2025-06-05 00:01:27,888 | INFO     | update_server=False
[2025-06-04 20:01:46] 2025-06-05 00:01:27,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:01:46] 2025-06-05 00:01:27,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:01:46] 2025-06-05 00:01:27,889 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:01:46] 2025-06-05 00:01:27,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:01:46] 2025-06-05 00:01:27,889 | INFO     | aborting loop
[2025-06-04 20:01:46] 2025-06-05 00:01:28,293 | INFO     | all job control threads have been joined
[2025-06-04 20:01:46] 2025-06-05 00:01:28,439 | INFO     | all data control threads have been joined
[2025-06-04 20:01:46] 2025-06-05 00:01:28,503 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:01:46] 2025-06-05 00:01:28,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:01:46] 2025-06-05 00:01:28,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:01:46] 2025-06-05 00:01:28,539 | INFO     | all payload control threads have been joined
[2025-06-04 20:01:46] 2025-06-05 00:01:28,893 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:28,895 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:29,298 | INFO     | [job] control thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:29,444 | INFO     | [data] control thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:29,452 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:29,458 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:29,489 | INFO     | [job] validate thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:29,544 | INFO     | [payload] control thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:29,563 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:29,895 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:30,127 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:30,262 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:30,464 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:30,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:01:46] 2025-06-05 00:01:31,808 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:31,896 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:38,431 | INFO     | job.realtimelogging is not enabled
[2025-06-04 20:01:46] 2025-06-05 00:01:39,437 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:01:46] 2025-06-05 00:01:40,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140694308058944)>', '<ExcThread(monitor, started 140693599155968)>']
[2025-06-04 20:01:46] 2025-06-05 00:01:41,574 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:01:46] 2025-06-05 00:01:41,575 | INFO     | [monitor] control thread has ended
[2025-06-04 20:01:46] 2025-06-05 00:01:45,803 | INFO     | all workflow threads have been joined
[2025-06-04 20:01:46] 2025-06-05 00:01:45,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:01:46] 2025-06-05 00:01:45,803 | INFO     | traces error code: 0
[2025-06-04 20:01:46] 2025-06-05 00:01:45,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:01:46] 2025-06-05 00:01:45,960 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:01:46] 2025-06-05 00:01:45,963 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:01:46] 2025-06-05 00:01:45,965 [wrapper] pilotpid: 3067604
[2025-06-04 20:01:46] 2025-06-05 00:01:45,967 [wrapper] Pilot exit status: 0
[2025-06-04 20:01:46] 2025-06-05 00:01:45,978 [wrapper] pandaids: 6668439432
[2025-06-04 20:01:46] 2025-06-05 00:01:46,049 [wrapper] cleanup supervisor_pilot 3987668 3067605
[2025-06-04 20:01:46] 2025-06-05 00:01:46,052 [wrapper] Test setup, not cleaning
[2025-06-04 20:01:46] 2025-06-05 00:01:46,054 [wrapper] apfmon messages muted
[2025-06-04 20:01:46] 2025-06-05 00:01:46,057 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:01:46] 2025-06-05 00:01:46,060 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:01:46]  *** Error codes and diagnostics ***
[2025-06-04 20:01:46]     "exeErrorCode": 0,
[2025-06-04 20:01:46]     "exeErrorDiag": "",
[2025-06-04 20:01:46]     "pilotErrorCode": 0,
[2025-06-04 20:01:46]     "pilotErrorDiag": "",
[2025-06-04 20:01:46]  *** Listing of results directory ***
[2025-06-04 20:01:46] total 414696
[2025-06-04 20:01:46] -rw-r--r--. 1 boincer umatlas    495897 May 28 07:30 pilot3.tar.gz
[2025-06-04 20:01:46] -rw-r--r--. 1 boincer umatlas      5111 May 28 07:35 queuedata.json
[2025-06-04 20:01:46] -rwx------. 1 boincer umatlas     37140 May 28 07:36 runpilot2-wrapper.sh
[2025-06-04 20:01:46] -rw-r--r--. 1 boincer umatlas       100 Jun  4 17:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:01:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 17:13 run_atlas
[2025-06-04 20:01:46] -rw-r--r--. 1 boincer umatlas       105 Jun  4 17:13 job.xml
[2025-06-04 20:01:46] -rw-r--r--. 2 boincer umatlas 222789651 Jun  4 17:13 EVNT.44871834._003267.pool.root.1
[2025-06-04 20:01:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 17:13 start_atlas.sh
[2025-06-04 20:01:46] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 17:13 shared
[2025-06-04 20:01:46] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 17:13 input.tar.gz
[2025-06-04 20:01:46] -rw-r--r--. 1 boincer umatlas         0 Jun  4 17:13 boinc_lockfile
[2025-06-04 20:01:46] -rw-r--r--. 1 boincer umatlas      2558 Jun  4 17:13 pandaJob.out
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas    987032 Jun  4 17:13 agis_schedconf.cvmfs.json
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas   1598969 Jun  4 17:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:01:46] drwx------. 4 boincer umatlas      4096 Jun  4 17:13 pilot3
[2025-06-04 20:01:46] -rw-r--r--. 1 boincer umatlas      6658 Jun  4 19:55 init_data.xml
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas 195436768 Jun  4 20:00 HITS.44871837._083748.pool.root.1
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas        95 Jun  4 20:00 pilot_heartbeat.json
[2025-06-04 20:01:46] -rw-r--r--. 1 boincer umatlas       530 Jun  4 20:00 boinc_task_state.xml
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas      1042 Jun  4 20:01 memory_monitor_summary.json
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas    382692 Jun  4 20:01 log.44871837._083748.job.log.tgz.1
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas      7720 Jun  4 20:01 heartbeat.json
[2025-06-04 20:01:46] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 20:01 boinc_mmap_file
[2025-06-04 20:01:46] -rw-r--r--. 1 boincer umatlas        28 Jun  4 20:01 wrapper_checkpoint.txt
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas      4425 Jun  4 20:01 pilotlog.txt
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas    910378 Jun  4 20:01 log.44871837._083748.job.log.1
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas       357 Jun  4 20:01 output.list
[2025-06-04 20:01:46] -rw-r--r--. 1 boincer umatlas       620 Jun  4 20:01 runtime_log
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas   1310720 Jun  4 20:01 result.tar.gz
[2025-06-04 20:01:46] -rw-r--r--. 1 boincer umatlas      8652 Jun  4 20:01 runtime_log.err
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas       655 Jun  4 20:01 c8JKDmDGUe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmF2bKDmRywHQn.diag
[2025-06-04 20:01:46] -rw-r--r--. 1 boincer umatlas     21112 Jun  4 20:01 stderr.txt
[2025-06-04 20:01:46] HITS file was successfully produced:
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas 195436768 Jun  4 20:00 shared/HITS.pool.root.1
[2025-06-04 20:01:46]  *** Contents of shared directory: ***
[2025-06-04 20:01:46] total 410236
[2025-06-04 20:01:46] -rw-r--r--. 2 boincer umatlas 222789651 Jun  4 17:13 ATLAS.root_0
[2025-06-04 20:01:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 17:13 start_atlas.sh
[2025-06-04 20:01:46] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 17:13 input.tar.gz
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas 195436768 Jun  4 20:00 HITS.pool.root.1
[2025-06-04 20:01:46] -rw-------. 1 boincer umatlas   1310720 Jun  4 20:01 result.tar.gz
20:01:47 (3064036): run_atlas exited; CPU time 61836.259823
20:01:47 (3064036): called boinc_finish(0)

</stderr_txt>
]]>

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