Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:50:07 (4118985): wrapper (7.7.26015): starting
18:50:07 (4118985): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 18:50:07] Arguments: --nthreads 12
[2025-06-04 18:50:07] Threads: 12
[2025-06-04 18:50:07] Checking for CVMFS
[2025-06-04 18:50:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:50:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:50:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:50:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:50:08] 2.12.6.0 3144709 389 87984 146797 3 290 10971497 40960001 10490 16776704 0 619656 98.063 2981607 16262 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 18:50:08] CVMFS is ok
[2025-06-04 18:50:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:50:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:50:08] Further information can be found at the LHC@home message board.
[2025-06-04 18:50:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:50:08] Checking for apptainer binary...
[2025-06-04 18:50:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:50:08] Running /usr/bin/apptainer --version
[2025-06-04 18:50:08] apptainer version 1.4.1-1.el9
[2025-06-04 18:50:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:50:08] c6-5-7-4.aglt2.org
[2025-06-04 18:50:08] apptainer works
[2025-06-04 18:50:08] Set ATHENA_PROC_NUMBER=12
[2025-06-04 18:50:08] Set ATHENA_CORE_NUMBER=12
[2025-06-04 18:50:08] Starting ATLAS job with PandaID=6678075718
[2025-06-04 18:50:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:38:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:38:45]  protocol_id=None
[2025-06-04 19:38:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 19:38:45]  replicas=None
[2025-06-04 19:38:45]  scope=mc23_13p6TeV
[2025-06-04 19:38:45]  status=None
[2025-06-04 19:38:45]  status_code=0
[2025-06-04 19:38:45]  storage_token=
[2025-06-04 19:38:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678075718/log.45006595._046325.job.log.tgz.1
[2025-06-04 19:38:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/e9/log.45006595._046325.job.log.tgz.1
[2025-06-04 19:38:45]  workdir=None
[2025-06-04 19:38:45] ]
[2025-06-04 19:38:45] 2025-06-04 23:38:16,952 | INFO     | transferring file log.45006595._046325.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678075718/log.45006595._046325.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 19:38:45] 2025-06-04 23:38:16,952 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678075718/log.45006595._046325.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._046325.job
[2025-06-04 19:38:45] 2025-06-04 23:38:17,007 | INFO     | adding to output.list: log.45006595._046325.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/e9/log.45006595._046325.job.log.tg
[2025-06-04 19:38:45] 2025-06-04 23:38:17,009 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 19:38:45] 2025-06-04 23:38:17,009 | INFO     | summary of transferred files:
[2025-06-04 19:38:45] 2025-06-04 23:38:17,009 | INFO     |  -- lfn=log.45006595._046325.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 19:38:45] 2025-06-04 23:38:17,009 | INFO     | stage-out finished correctly
[2025-06-04 19:38:45] 2025-06-04 23:38:17,728 | INFO     | monitor loop #219: job 0:6678075718 is in state 'finished'
[2025-06-04 19:38:45] 2025-06-04 23:38:17,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:38:45] 2025-06-04 23:38:18,839 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 19:38:45] 2025-06-04 23:38:20,233 | INFO     | monitor loop #220: job 0:6678075718 is in state 'finished'
[2025-06-04 19:38:45] 2025-06-04 23:38:20,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:38:45] 2025-06-04 23:38:21,635 | INFO     | job 6678075718 has state=finished
[2025-06-04 19:38:45] 2025-06-04 23:38:21,635 | INFO     | preparing for final server update for job 6678075718 in state='finished'
[2025-06-04 19:38:45] 2025-06-04 23:38:21,636 | INFO     | this job has now completed (state=finished)
[2025-06-04 19:38:45] 2025-06-04 23:38:21,636 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 19:38:45] 2025-06-04 23:38:21,636 | INFO     | log transfer has been attempted: DONE
[2025-06-04 19:38:45] 2025-06-04 23:38:21,637 | INFO     | job 6678075718 has finished - writing final server update
[2025-06-04 19:38:45] 2025-06-04 23:38:21,637 | INFO     | total number of processed events: 400 (read)
[2025-06-04 19:38:45] 2025-06-04 23:38:21,656 | INFO     | executing command: lscpu
[2025-06-04 19:38:45] 2025-06-04 23:38:21,752 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 19:38:45] 2025-06-04 23:38:22,738 | INFO     | monitor loop #221: job 0:6678075718 is in state 'finished'
[2025-06-04 19:38:45] 2025-06-04 23:38:22,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:38:45] 2025-06-04 23:38:23,674 | INFO     | PID=4122583 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 19:38:45] 2025-06-04 23:38:23,675 | INFO     | .. there are 8 such processes running
[2025-06-04 19:38:45] 2025-06-04 23:38:25,243 | INFO     | monitor loop #222: job 0:6678075718 is in state 'finished'
[2025-06-04 19:38:45] 2025-06-04 23:38:25,243 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:38:45] 2025-06-04 23:38:27,746 | INFO     | monitor loop #223: job 0:6678075718 is in state 'finished'
[2025-06-04 19:38:45] 2025-06-04 23:38:27,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:38:45] 2025-06-04 23:38:29,418 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 19:38:45] 2025-06-04 23:38:29,419 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678075718/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:38:45] 2025-06-04 23:38:29,420 | INFO     | extracted standard info from prmon json
[2025-06-04 19:38:45] 2025-06-04 23:38:29,420 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:38:45] 2025-06-04 23:38:29,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:38:45] 2025-06-04 23:38:29,421 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:38:45] 2025-06-04 23:38:29,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:38:45] 2025-06-04 23:38:29,422 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:38:45] 2025-06-04 23:38:29,422 | INFO     | sum of square deviations: 19832930.0
[2025-06-04 19:38:45] 2025-06-04 23:38:29,423 | INFO     | sum of deviations: -4589226603.0
[2025-06-04 19:38:45] 2025-06-04 23:38:29,423 | INFO     | mean x: 1749078937.5
[2025-06-04 19:38:45] 2025-06-04 23:38:29,423 | INFO     | mean y: 2581137.55
[2025-06-04 19:38:45] 2025-06-04 23:38:29,423 | INFO     | -- intersect: 404729446543.81995
[2025-06-04 19:38:45] 2025-06-04 23:38:29,423 | INFO     | intersect: 404729446543.81995
[2025-06-04 19:38:45] 2025-06-04 23:38:29,423 | INFO     | chi2: 0.07439456831623936
[2025-06-04 19:38:45] 2025-06-04 23:38:29,423 | INFO     | -- intersect: 404729446543.81995
[2025-06-04 19:38:45] 2025-06-04 23:38:29,423 | INFO     | current memory leak: -231.39 B/s (using 40 data points, chi2=0.07)
[2025-06-04 19:38:45] 2025-06-04 23:38:29,424 | INFO     | ..............................
[2025-06-04 19:38:45] 2025-06-04 23:38:29,424 | INFO     | . Timing measurements:
[2025-06-04 19:38:45] 2025-06-04 23:38:29,424 | INFO     | . get job = 0 s
[2025-06-04 19:38:45] 2025-06-04 23:38:29,424 | INFO     | . initial setup = 2 s
[2025-06-04 19:38:45] 2025-06-04 23:38:29,424 | INFO     | . payload setup = 5 s
[2025-06-04 19:38:45] 2025-06-04 23:38:29,424 | INFO     | . stage-in = 0 s
[2025-06-04 19:38:45] 2025-06-04 23:38:29,424 | INFO     | . payload execution = 2852 s
[2025-06-04 19:38:45] 2025-06-04 23:38:29,424 | INFO     | . stage-out = 1 s
[2025-06-04 19:38:45] 2025-06-04 23:38:29,424 | INFO     | . log creation = 0 s
[2025-06-04 19:38:45] 2025-06-04 23:38:29,424 | INFO     | ..............................
[2025-06-04 19:38:45] 2025-06-04 23:38:29,514 | INFO     | 
[2025-06-04 19:38:45] 2025-06-04 23:38:29,514 | INFO     | job summary report
[2025-06-04 19:38:45] 2025-06-04 23:38:29,514 | INFO     | --------------------------------------------------
[2025-06-04 19:38:45] 2025-06-04 23:38:29,514 | INFO     | PanDA job id: 6678075718
[2025-06-04 19:38:45] 2025-06-04 23:38:29,514 | INFO     | task id: 45006595
[2025-06-04 19:38:45] 2025-06-04 23:38:29,514 | INFO     | errors: (none)
[2025-06-04 19:38:45] 2025-06-04 23:38:29,514 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:38:45] 2025-06-04 23:38:29,514 | INFO     | pilot state: finished 
[2025-06-04 19:38:45] 2025-06-04 23:38:29,514 | INFO     | transexitcode: 0
[2025-06-04 19:38:45] 2025-06-04 23:38:29,514 | INFO     | exeerrorcode: 0
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | exeerrordiag: 
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | exitcode: 0
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | exitmsg: OK
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | cpuconsumptiontime: 29813 s
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | nevents: 400
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | neventsw: 0
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | pid: 4129490
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | pgrp: 4129490
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | corecount: 12
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | event service: False
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | sizes: {0: 2397342, 4: 2397548, 11: 2397576, 2862: 2422908, 2864: 2431849, 2866: 2431905, 2876: 2432203}
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | --------------------------------------------------
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | 
[2025-06-04 19:38:45] 2025-06-04 23:38:29,515 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 19:38:45] 2025-06-04 23:38:29,534 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:38:45] 2025-06-04 23:38:29,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:38:45] 2025-06-04 23:38:29,536 | INFO     | job 6678075718 has completed (purged errors)
[2025-06-04 19:38:45] 2025-06-04 23:38:29,536 | INFO     | overall cleanup function is called
[2025-06-04 19:38:45] 2025-06-04 23:38:30,554 | INFO     | --- collectZombieJob: --- 10, [4129490]
[2025-06-04 19:38:45] 2025-06-04 23:38:30,554 | INFO     | zombie collector waiting for pid 4129490
[2025-06-04 19:38:45] 2025-06-04 23:38:30,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:38:45] 2025-06-04 23:38:30,554 | INFO     | collected zombie processes
[2025-06-04 19:38:45] 2025-06-04 23:38:30,554 | INFO     | will attempt to kill all subprocesses of pid=4129490
[2025-06-04 19:38:45] 2025-06-04 23:38:30,941 | INFO     | process IDs to be killed: [4129490] (in reverse order)
[2025-06-04 19:38:45] 2025-06-04 23:38:31,222 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:38:45] 2025-06-04 23:38:31,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:38:45] 2025-06-04 23:38:31,250 | INFO     | did not find any defunct processes belonging to 4129490
[2025-06-04 19:38:45] 2025-06-04 23:38:31,274 | INFO     | did not find any defunct processes belonging to 4129490
[2025-06-04 19:38:45] 2025-06-04 23:38:31,274 | INFO     | ready for new job
[2025-06-04 19:38:45] 2025-06-04 23:38:31,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:38:45] 2025-06-04 23:38:31,276 | INFO     | **************************************
[2025-06-04 19:38:45] 2025-06-04 23:38:31,276 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:38:45] 2025-06-04 23:38:31,276 | INFO     | **************************************
[2025-06-04 19:38:45] 2025-06-04 23:38:31,276 | INFO     | 
[2025-06-04 19:38:45] 2025-06-04 23:38:31,294 | INFO     | architecture information:
[2025-06-04 19:38:45] 2025-06-04 23:38:31,304 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:38:45] 2025-06-04 23:38:31,353 | INFO     | cat /etc/os-release:
[2025-06-04 19:38:45] NAME="CentOS Linux"
[2025-06-04 19:38:45] VERSION="7 (Core)"
[2025-06-04 19:38:45] ID="centos"
[2025-06-04 19:38:45] ID_LIKE="rhel fedora"
[2025-06-04 19:38:45] VERSION_ID="7"
[2025-06-04 19:38:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:38:45] ANSI_COLOR="0;31"
[2025-06-04 19:38:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:38:45] HOME_URL="https://www.centos.org/"
[2025-06-04 19:38:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:38:45] 
[2025-06-04 19:38:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:38:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:38:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:38:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:38:45] 
[2025-06-04 19:38:45] 2025-06-04 23:38:31,354 | INFO     | **************************************
[2025-06-04 19:38:45] 2025-06-04 23:38:31,859 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 19:38:45] 2025-06-04 23:38:31,918 | INFO     | sufficient remaining disk space (75567726592 B)
[2025-06-04 19:38:45] 2025-06-04 23:38:31,918 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:38:45] 2025-06-04 23:38:31,918 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:38:45] 2025-06-04 23:38:31,918 | INFO     | update_server=False
[2025-06-04 19:38:45] 2025-06-04 23:38:31,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:38:45] 2025-06-04 23:38:31,919 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:38:45] 2025-06-04 23:38:31,919 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:38:45] 2025-06-04 23:38:31,920 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:38:45] 2025-06-04 23:38:31,920 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:38:45] 2025-06-04 23:38:31,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:38:45] 2025-06-04 23:38:31,924 | INFO     | aborting loop
[2025-06-04 19:38:45] 2025-06-04 23:38:32,357 | INFO     | all payload control threads have been joined
[2025-06-04 19:38:45] 2025-06-04 23:38:32,476 | INFO     | all job control threads have been joined
[2025-06-04 19:38:45] 2025-06-04 23:38:32,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:38:45] 2025-06-04 23:38:32,923 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:32,930 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:32,992 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:33,002 | INFO     | all data control threads have been joined
[2025-06-04 19:38:45] 2025-06-04 23:38:33,162 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:33,363 | INFO     | [payload] control thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:33,482 | INFO     | [job] control thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:33,617 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:33,705 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:33,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:38:45] 2025-06-04 23:38:34,008 | INFO     | [data] control thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:34,039 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:34,122 | INFO     | [job] validate thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:34,185 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:34,192 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:34,530 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:38:45] 2025-06-04 23:38:34,750 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:35,536 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:37,995 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:38:45] 2025-06-04 23:38:39,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140694089398080)>', '<ExcThread(monitor, started 140693456545536)>']
[2025-06-04 19:38:45] 2025-06-04 23:38:39,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:38:45] 2025-06-04 23:38:39,966 | INFO     | [monitor] control thread has ended
[2025-06-04 19:38:45] 2025-06-04 23:38:44,764 | INFO     | all workflow threads have been joined
[2025-06-04 19:38:45] 2025-06-04 23:38:44,764 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:38:45] 2025-06-04 23:38:44,764 | INFO     | traces error code: 0
[2025-06-04 19:38:45] 2025-06-04 23:38:44,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:38:45] 2025-06-04 23:38:44,925 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:38:45] 2025-06-04 23:38:44,931 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:38:45] 2025-06-04 23:38:44,934 [wrapper] pilotpid: 4122583
[2025-06-04 19:38:45] 2025-06-04 23:38:44,936 [wrapper] Pilot exit status: 0
[2025-06-04 19:38:45] 2025-06-04 23:38:44,950 [wrapper] pandaids: 6678075718
[2025-06-04 19:38:45] 2025-06-04 23:38:45,019 [wrapper] cleanup supervisor_pilot  146012 4122584
[2025-06-04 19:38:45] 2025-06-04 23:38:45,024 [wrapper] Test setup, not cleaning
[2025-06-04 19:38:45] 2025-06-04 23:38:45,028 [wrapper] apfmon messages muted
[2025-06-04 19:38:45] 2025-06-04 23:38:45,032 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:38:45] 2025-06-04 23:38:45,036 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:38:45]  *** Error codes and diagnostics ***
[2025-06-04 19:38:45]     "exeErrorCode": 0,
[2025-06-04 19:38:45]     "exeErrorDiag": "",
[2025-06-04 19:38:45]     "pilotErrorCode": 0,
[2025-06-04 19:38:45]     "pilotErrorDiag": "",
[2025-06-04 19:38:45]  *** Listing of results directory ***
[2025-06-04 19:38:45] total 392172
[2025-06-04 19:38:45] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 17:41 pilot3.tar.gz
[2025-06-04 19:38:45] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 17:47 queuedata.json
[2025-06-04 19:38:45] -rwx------. 1 boincer umatlas     37140 Jun  3 17:47 runpilot2-wrapper.sh
[2025-06-04 19:38:45] -rw-r--r--. 1 boincer umatlas       100 Jun  4 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:38:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 18:50 run_atlas
[2025-06-04 19:38:45] -rw-r--r--. 1 boincer umatlas       105 Jun  4 18:50 job.xml
[2025-06-04 19:38:45] -rw-r--r--. 2 boincer umatlas 212969750 Jun  4 18:50 EVNT.45006593._001858.pool.root.1
[2025-06-04 19:38:45] -rw-r--r--. 2 boincer umatlas    508873 Jun  4 18:50 input.tar.gz
[2025-06-04 19:38:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 18:50 start_atlas.sh
[2025-06-04 19:38:45] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 18:50 shared
[2025-06-04 19:38:45] -rw-r--r--. 1 boincer umatlas         0 Jun  4 18:50 boinc_lockfile
[2025-06-04 19:38:45] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 18:50 pandaJob.out
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas    987032 Jun  4 18:50 agis_schedconf.cvmfs.json
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas   1598969 Jun  4 18:50 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:38:45] drwx------. 4 boincer umatlas      4096 Jun  4 18:50 pilot3
[2025-06-04 19:38:45] -rw-r--r--. 1 boincer umatlas      6840 Jun  4 19:28 init_data.xml
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas 183470025 Jun  4 19:37 HITS.45006595._046325.pool.root.1
[2025-06-04 19:38:45] -rw-r--r--. 1 boincer umatlas       529 Jun  4 19:37 boinc_task_state.xml
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas        95 Jun  4 19:38 pilot_heartbeat.json
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas      1044 Jun  4 19:38 memory_monitor_summary.json
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas    351294 Jun  4 19:38 log.45006595._046325.job.log.tgz.1
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas      7729 Jun  4 19:38 heartbeat.json
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas      4476 Jun  4 19:38 pilotlog.txt
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas    307259 Jun  4 19:38 log.45006595._046325.job.log.1
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas       357 Jun  4 19:38 output.list
[2025-06-04 19:38:45] -rw-r--r--. 1 boincer umatlas       620 Jun  4 19:38 runtime_log
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas    675840 Jun  4 19:38 result.tar.gz
[2025-06-04 19:38:45] -rw-r--r--. 1 boincer umatlas      8661 Jun  4 19:38 runtime_log.err
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas       652 Jun  4 19:38 lXcLDmHfog7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyHmKDmlqVX9m.diag
[2025-06-04 19:38:45] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 19:38 boinc_mmap_file
[2025-06-04 19:38:45] -rw-r--r--. 1 boincer umatlas        27 Jun  4 19:38 wrapper_checkpoint.txt
[2025-06-04 19:38:45] -rw-r--r--. 1 boincer umatlas     21850 Jun  4 19:38 stderr.txt
[2025-06-04 19:38:45] HITS file was successfully produced:
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas 183470025 Jun  4 19:37 shared/HITS.pool.root.1
[2025-06-04 19:38:45]  *** Contents of shared directory: ***
[2025-06-04 19:38:45] total 388332
[2025-06-04 19:38:45] -rw-r--r--. 2 boincer umatlas 212969750 Jun  4 18:50 ATLAS.root_0
[2025-06-04 19:38:45] -rw-r--r--. 2 boincer umatlas    508873 Jun  4 18:50 input.tar.gz
[2025-06-04 19:38:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 18:50 start_atlas.sh
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas 183470025 Jun  4 19:37 HITS.pool.root.1
[2025-06-04 19:38:45] -rw-------. 1 boincer umatlas    675840 Jun  4 19:38 result.tar.gz
19:38:47 (4118985): run_atlas exited; CPU time 29837.071336
19:38:47 (4118985): called boinc_finish(0)

</stderr_txt>
]]>

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