Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:38:44 (940347): wrapper (7.7.26015): starting
11:38:44 (940347): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 11:38:44] Arguments: --nthreads 12
[2025-06-06 11:38:44] Threads: 12
[2025-06-06 11:38:44] Checking for CVMFS
[2025-06-06 11:38:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 11:38:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 11:38:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 11:38:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 11:38:45] 2.12.7.0 4529 2299 42388 146855 3 55 2742785 4096000 0 130560 0 2617193 99.993 555000 154 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 11:38:45] CVMFS is ok
[2025-06-06 11:38:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 11:38:45] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 11:38:45] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 11:38:45] Further information can be found at the LHC@home message board.
[2025-06-06 11:38:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:38:45] Checking for apptainer binary...
[2025-06-06 11:38:45] apptainer is not installed, using version from CVMFS
[2025-06-06 11:38:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:38:52] martinpcalt
[2025-06-06 11:38:52] apptainer works
[2025-06-06 11:38:52] Set ATHENA_PROC_NUMBER=12
[2025-06-06 11:38:52] Set ATHENA_CORE_NUMBER=12
[2025-06-06 11:38:52] Starting ATLAS job with PandaID=6680051268
[2025-06-06 11:38:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 14:15:59]  *** The last 200 lines of the pilot log: ***
[2025-06-06 14:15:59] 2025-06-06 14:15:40,328 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 14:15:59] 2025-06-06 14:15:40,328 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/3/PanDA_Pilot-6680051268/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 14:15:59] 2025-06-06 14:15:40,329 | INFO     | extracted standard info from prmon json
[2025-06-06 14:15:59] 2025-06-06 14:15:40,329 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 14:15:59] 2025-06-06 14:15:40,329 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 14:15:59] 2025-06-06 14:15:40,329 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 14:15:59] 2025-06-06 14:15:40,329 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 14:15:59] 2025-06-06 14:15:40,331 | INFO     | fitting pss+swap vs Time
[2025-06-06 14:15:59] 2025-06-06 14:15:40,332 | INFO     | sum of square deviations: 1088905998.0
[2025-06-06 14:15:59] 2025-06-06 14:15:40,332 | INFO     | sum of deviations: -3848125280.999996
[2025-06-06 14:15:59] 2025-06-06 14:15:40,332 | INFO     | mean x: 1749214576.5
[2025-06-06 14:15:59] 2025-06-06 14:15:40,332 | INFO     | mean y: 2625985.2763157897
[2025-06-06 14:15:59] 2025-06-06 14:15:40,333 | INFO     | -- intersect: 6184240234.887008
[2025-06-06 14:15:59] 2025-06-06 14:15:40,333 | INFO     | intersect: 6184240234.887008
[2025-06-06 14:15:59] 2025-06-06 14:15:40,333 | INFO     | chi2: 2.9642742954362715
[2025-06-06 14:15:59] 2025-06-06 14:15:40,333 | INFO     | sum of square deviations: 984941258.0
[2025-06-06 14:15:59] 2025-06-06 14:15:40,334 | INFO     | sum of deviations: 16019960178.000002
[2025-06-06 14:15:59] 2025-06-06 14:15:40,334 | INFO     | mean x: 1749214424.0
[2025-06-06 14:15:59] 2025-06-06 14:15:40,334 | INFO     | mean y: 2654512.5850340137
[2025-06-06 14:15:59] 2025-06-06 14:15:40,334 | INFO     | -- intersect: -28448123833.49092
[2025-06-06 14:15:59] 2025-06-06 14:15:40,334 | INFO     | intersect: -28448123833.49092
[2025-06-06 14:15:59] 2025-06-06 14:15:40,334 | INFO     | chi2: 1.4403005049939661
[2025-06-06 14:15:59] 2025-06-06 14:15:40,334 | INFO     | current chi2=1.4403005049939661 (change=51.41136205878721 %)
[2025-06-06 14:15:59] 2025-06-06 14:15:40,334 | INFO     | sum of square deviations: 887813855.5
[2025-06-06 14:15:59] 2025-06-06 14:15:40,335 | INFO     | sum of deviations: 15352463041.999996
[2025-06-06 14:15:59] 2025-06-06 14:15:40,335 | INFO     | mean x: 1749214271.5
[2025-06-06 14:15:59] 2025-06-06 14:15:40,335 | INFO     | mean y: 2653464.1408450706
[2025-06-06 14:15:59] 2025-06-06 14:15:40,335 | INFO     | -- intersect: -30245519944.482758
[2025-06-06 14:15:59] 2025-06-06 14:15:40,335 | INFO     | intersect: -30245519944.482758
[2025-06-06 14:15:59] 2025-06-06 14:15:40,335 | INFO     | chi2: 1.4420589439205949
[2025-06-06 14:15:59] 2025-06-06 14:15:40,335 | INFO     | current chi2=1.4420589439205949 (change=-0.12208833646393215 %)
[2025-06-06 14:15:59] 2025-06-06 14:15:40,336 | INFO     | right removable region: 141
[2025-06-06 14:15:59] 2025-06-06 14:15:40,340 | INFO     | sum of square deviations: 984941258.0
[2025-06-06 14:15:59] 2025-06-06 14:15:40,340 | INFO     | sum of deviations: -24363900383.0
[2025-06-06 14:15:59] 2025-06-06 14:15:40,340 | INFO     | mean x: 1749214729.0
[2025-06-06 14:15:59] 2025-06-06 14:15:40,341 | INFO     | mean y: 2655458.4965986395
[2025-06-06 14:15:59] 2025-06-06 14:15:40,341 | INFO     | -- intersect: 43271929701.68435
[2025-06-06 14:15:59] 2025-06-06 14:15:40,341 | INFO     | intersect: 43271929701.68435
[2025-06-06 14:15:59] 2025-06-06 14:15:40,341 | INFO     | chi2: 1.6125769403886303
[2025-06-06 14:15:59] 2025-06-06 14:15:40,341 | INFO     | current chi2=1.6125769403886303 (change=45.599604501131466 %)
[2025-06-06 14:15:59] 2025-06-06 14:15:40,341 | INFO     | sum of square deviations: 887813855.5
[2025-06-06 14:15:59] 2025-06-06 14:15:40,342 | INFO     | sum of deviations: -20528928532.0
[2025-06-06 14:15:59] 2025-06-06 14:15:40,342 | INFO     | mean x: 1749214881.5
[2025-06-06 14:15:59] 2025-06-06 14:15:40,342 | INFO     | mean y: 2649423.4647887326
[2025-06-06 14:15:59] 2025-06-06 14:15:40,342 | INFO     | -- intersect: 40449762370.58228
[2025-06-06 14:15:59] 2025-06-06 14:15:40,342 | INFO     | intersect: 40449762370.58228
[2025-06-06 14:15:59] 2025-06-06 14:15:40,342 | INFO     | chi2: 1.6041631839919077
[2025-06-06 14:15:59] 2025-06-06 14:15:40,342 | INFO     | current chi2=1.6041631839919077 (change=0.5217584467439353 %)
[2025-06-06 14:15:59] 2025-06-06 14:15:40,342 | INFO     | left removable region: 20
[2025-06-06 14:15:59] 2025-06-06 14:15:40,343 | INFO     | sum of square deviations: 549294020.0
[2025-06-06 14:15:59] 2025-06-06 14:15:40,343 | INFO     | sum of deviations: 1091190021.0000002
[2025-06-06 14:15:59] 2025-06-06 14:15:40,343 | INFO     | mean x: 1749214851.0
[2025-06-06 14:15:59] 2025-06-06 14:15:40,343 | INFO     | mean y: 2675672.7024793387
[2025-06-06 14:15:59] 2025-06-06 14:15:40,343 | INFO     | -- intersect: -3472195198.8140216
[2025-06-06 14:15:59] 2025-06-06 14:15:40,343 | INFO     | intersect: -3472195198.8140216
[2025-06-06 14:15:59] 2025-06-06 14:15:40,343 | INFO     | chi2: 0.0013159455350748163
[2025-06-06 14:15:59] 2025-06-06 14:15:40,344 | INFO     | -- intersect: -3472195198.8140216
[2025-06-06 14:15:59] 2025-06-06 14:15:40,348 | INFO     | current memory leak: 1.99 B/s (using 121 data points, chi2=0.00)
[2025-06-06 14:15:59] 2025-06-06 14:15:40,348 | INFO     | ..............................
[2025-06-06 14:15:59] 2025-06-06 14:15:40,348 | INFO     | . Timing measurements:
[2025-06-06 14:15:59] 2025-06-06 14:15:40,348 | INFO     | . get job = 0 s
[2025-06-06 14:15:59] 2025-06-06 14:15:40,348 | INFO     | . initial setup = 1 s
[2025-06-06 14:15:59] 2025-06-06 14:15:40,348 | INFO     | . payload setup = 15 s
[2025-06-06 14:15:59] 2025-06-06 14:15:40,348 | INFO     | . stage-in = 0 s
[2025-06-06 14:15:59] 2025-06-06 14:15:40,348 | INFO     | . payload execution = 9268 s
[2025-06-06 14:15:59] 2025-06-06 14:15:40,349 | INFO     | . stage-out = 14 s
[2025-06-06 14:15:59] 2025-06-06 14:15:40,349 | INFO     | . log creation = 0 s
[2025-06-06 14:15:59] 2025-06-06 14:15:40,349 | INFO     | ..............................
[2025-06-06 14:15:59] 2025-06-06 14:15:40,506 | INFO     | 
[2025-06-06 14:15:59] 2025-06-06 14:15:40,580 | INFO     | job summary report
[2025-06-06 14:15:59] 2025-06-06 14:15:40,580 | INFO     | --------------------------------------------------
[2025-06-06 14:15:59] 2025-06-06 14:15:40,580 | INFO     | PanDA job id: 6680051268
[2025-06-06 14:15:59] 2025-06-06 14:15:40,580 | INFO     | task id: 45006595
[2025-06-06 14:15:59] 2025-06-06 14:15:40,580 | INFO     | errors: (none)
[2025-06-06 14:15:59] 2025-06-06 14:15:40,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 14:15:59] 2025-06-06 14:15:40,580 | INFO     | pilot state: finished 
[2025-06-06 14:15:59] 2025-06-06 14:15:40,580 | INFO     | transexitcode: 0
[2025-06-06 14:15:59] 2025-06-06 14:15:40,580 | INFO     | exeerrorcode: 0
[2025-06-06 14:15:59] 2025-06-06 14:15:40,580 | INFO     | exeerrordiag: 
[2025-06-06 14:15:59] 2025-06-06 14:15:40,581 | INFO     | exitcode: 0
[2025-06-06 14:15:59] 2025-06-06 14:15:40,581 | INFO     | exitmsg: OK
[2025-06-06 14:15:59] 2025-06-06 14:15:40,581 | INFO     | cpuconsumptiontime: 29099 s
[2025-06-06 14:15:59] 2025-06-06 14:15:40,581 | INFO     | nevents: 400
[2025-06-06 14:15:59] 2025-06-06 14:15:40,581 | INFO     | neventsw: 0
[2025-06-06 14:15:59] 2025-06-06 14:15:40,581 | INFO     | pid: 960532
[2025-06-06 14:15:59] 2025-06-06 14:15:40,581 | INFO     | pgrp: 960532
[2025-06-06 14:15:59] 2025-06-06 14:15:40,581 | INFO     | corecount: 12
[2025-06-06 14:15:59] 2025-06-06 14:15:40,581 | INFO     | event service: False
[2025-06-06 14:15:59] 2025-06-06 14:15:40,581 | INFO     | sizes: {0: 2397264, 2: 2397470, 11: 2397498, 9290: 2425603, 9291: 2425602, 9308: 2434829, 9387: 2434943}
[2025-06-06 14:15:59] 2025-06-06 14:15:40,581 | INFO     | --------------------------------------------------
[2025-06-06 14:15:59] 2025-06-06 14:15:40,581 | INFO     | 
[2025-06-06 14:15:59] 2025-06-06 14:15:40,581 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-06 14:15:59] 2025-06-06 14:15:40,612 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,612 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,612 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,612 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,614 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 14:15:59] 2025-06-06 14:15:40,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,614 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 14:15:59] 2025-06-06 14:15:40,614 | INFO     | job 6680051268 has completed (purged errors)
[2025-06-06 14:15:59] 2025-06-06 14:15:40,614 | INFO     | overall cleanup function is called
[2025-06-06 14:15:59] 2025-06-06 14:15:41,624 | INFO     | --- collectZombieJob: --- 10, [960532]
[2025-06-06 14:15:59] 2025-06-06 14:15:41,624 | INFO     | zombie collector waiting for pid 960532
[2025-06-06 14:15:59] 2025-06-06 14:15:41,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 14:15:59] 2025-06-06 14:15:41,624 | INFO     | collected zombie processes
[2025-06-06 14:15:59] 2025-06-06 14:15:41,624 | INFO     | will attempt to kill all subprocesses of pid=960532
[2025-06-06 14:15:59] 2025-06-06 14:15:41,844 | INFO     | process IDs to be killed: [960532] (in reverse order)
[2025-06-06 14:15:59] 2025-06-06 14:15:42,304 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 14:15:59] 2025-06-06 14:15:42,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 14:15:59] 2025-06-06 14:15:42,306 | INFO     | did not find any defunct processes belonging to 960532
[2025-06-06 14:15:59] 2025-06-06 14:15:42,307 | INFO     | did not find any defunct processes belonging to 960532
[2025-06-06 14:15:59] 2025-06-06 14:15:42,307 | INFO     | ready for new job
[2025-06-06 14:15:59] 2025-06-06 14:15:42,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 14:15:59] 2025-06-06 14:15:42,312 | INFO     | **************************************
[2025-06-06 14:15:59] 2025-06-06 14:15:42,313 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 14:15:59] 2025-06-06 14:15:42,313 | INFO     | **************************************
[2025-06-06 14:15:59] 2025-06-06 14:15:42,313 | INFO     | 
[2025-06-06 14:15:59] 2025-06-06 14:15:42,336 | INFO     | architecture information:
[2025-06-06 14:15:59] 2025-06-06 14:15:42,340 | INFO     | executing command: cat /etc/os-release
[2025-06-06 14:15:59] 2025-06-06 14:15:42,384 | INFO     | cat /etc/os-release:
[2025-06-06 14:15:59] NAME="CentOS Linux"
[2025-06-06 14:15:59] VERSION="7 (Core)"
[2025-06-06 14:15:59] ID="centos"
[2025-06-06 14:15:59] ID_LIKE="rhel fedora"
[2025-06-06 14:15:59] VERSION_ID="7"
[2025-06-06 14:15:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 14:15:59] ANSI_COLOR="0;31"
[2025-06-06 14:15:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 14:15:59] HOME_URL="https://www.centos.org/"
[2025-06-06 14:15:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 14:15:59] 
[2025-06-06 14:15:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 14:15:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 14:15:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 14:15:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 14:15:59] 
[2025-06-06 14:15:59] 2025-06-06 14:15:42,384 | INFO     | **************************************
[2025-06-06 14:15:59] 2025-06-06 14:15:42,888 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-06 14:15:59] 2025-06-06 14:15:42,924 | INFO     | sufficient remaining disk space (278889758720 B)
[2025-06-06 14:15:59] 2025-06-06 14:15:42,924 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 14:15:59] 2025-06-06 14:15:42,924 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 14:15:59] 2025-06-06 14:15:42,924 | INFO     | update_server=False
[2025-06-06 14:15:59] 2025-06-06 14:15:42,924 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 14:15:59] 2025-06-06 14:15:42,925 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 14:15:59] 2025-06-06 14:15:42,925 | INFO     | aborting loop
[2025-06-06 14:15:59] 2025-06-06 14:15:43,480 | INFO     | all payload control threads have been joined
[2025-06-06 14:15:59] 2025-06-06 14:15:43,768 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 14:15:59] 2025-06-06 14:15:43,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 14:15:59] 2025-06-06 14:15:43,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 14:15:59] 2025-06-06 14:15:43,929 | INFO     | [job] retrieve thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:43,930 | INFO     | [job] job monitor thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:44,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 14:15:59] 2025-06-06 14:15:44,036 | INFO     | all data control threads have been joined
[2025-06-06 14:15:59] 2025-06-06 14:15:44,364 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:44,464 | INFO     | all job control threads have been joined
[2025-06-06 14:15:59] 2025-06-06 14:15:44,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 14:15:59] 2025-06-06 14:15:44,488 | INFO     | [payload] control thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:44,808 | INFO     | [payload] failed_post thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:45,040 | INFO     | [data] control thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:45,392 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:45,440 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:45,440 | INFO     | [data] copytool_in thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:45,452 | INFO     | [job] validate thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:45,460 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:45,472 | INFO     | [payload] validate_post thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:45,472 | INFO     | [job] control thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:45,532 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 14:15:59] 2025-06-06 14:15:46,044 | INFO     | [data] copytool_out thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:46,540 | INFO     | [job] queue monitor thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:48,496 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 14:15:59] 2025-06-06 14:15:49,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140619375028032)>', '<ExcThread(monitor, started 140618932135680)>']
[2025-06-06 14:15:59] 2025-06-06 14:15:49,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 14:15:59] 2025-06-06 14:15:49,796 | INFO     | [monitor] control thread has ended
[2025-06-06 14:15:59] 2025-06-06 14:15:54,556 | INFO     | all workflow threads have been joined
[2025-06-06 14:15:59] 2025-06-06 14:15:54,556 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 14:15:59] 2025-06-06 14:15:54,588 | INFO     | traces error code: 0
[2025-06-06 14:15:59] 2025-06-06 14:15:54,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 14:15:59] 2025-06-06 14:15:56,317 [wrapper] ==== pilot stdout END ====
[2025-06-06 14:15:59] 2025-06-06 14:15:56,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 14:15:59] 2025-06-06 14:15:56,353 [wrapper] pilotpid: 946571
[2025-06-06 14:15:59] 2025-06-06 14:15:56,412 [wrapper] Pilot exit status: 0
[2025-06-06 14:15:59] 2025-06-06 14:15:56,560 [wrapper] pandaids: 6680051268
[2025-06-06 14:15:59] 2025-06-06 14:15:56,629 [wrapper] cleanup supervisor_pilot  991664 946572
[2025-06-06 14:15:59] 2025-06-06 14:15:56,653 [wrapper] Test setup, not cleaning
[2025-06-06 14:15:59] 2025-06-06 14:15:56,677 [wrapper] apfmon messages muted
[2025-06-06 14:15:59] 2025-06-06 14:15:56,701 [wrapper] ==== wrapper stdout END ====
[2025-06-06 14:15:59] 2025-06-06 14:15:56,729 [wrapper] ==== wrapper stderr END ====
[2025-06-06 14:15:59]  *** Error codes and diagnostics ***
[2025-06-06 14:15:59]     "exeErrorCode": 0,
[2025-06-06 14:15:59]     "exeErrorDiag": "",
[2025-06-06 14:15:59]     "pilotErrorCode": 0,
[2025-06-06 14:15:59]     "pilotErrorDiag": "",
[2025-06-06 14:15:59]  *** Listing of results directory ***
[2025-06-06 14:15:59] total 396524
[2025-06-06 14:15:59] -rw-r--r-- 1 boinc boinc    495897 Jun  4 20:38 pilot3.tar.gz
[2025-06-06 14:15:59] -rwx------ 1 boinc boinc     37140 Jun  4 21:06 runpilot2-wrapper.sh
[2025-06-06 14:15:59] -rw-r--r-- 1 boinc boinc      5111 Jun  4 21:06 queuedata.json
[2025-06-06 14:15:59] -rw-rw-r-- 1 boinc boinc       100 Jun  6 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 14:15:59] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 11:38 run_atlas
[2025-06-06 14:15:59] -rw-rw-r-- 1 boinc boinc       105 Jun  6 11:38 job.xml
[2025-06-06 14:15:59] -rw-rw-r-- 1 boinc boinc      9334 Jun  6 11:38 init_data.xml
[2025-06-06 14:15:59] -rw-r--r-- 2 boinc boinc 214577005 Jun  6 11:38 EVNT.45006593._002010.pool.root.1
[2025-06-06 14:15:59] drwxrwx--x 2 boinc boinc      4096 Jun  6 11:38 shared
[2025-06-06 14:15:59] -rw-r--r-- 2 boinc boinc    508881 Jun  6 11:38 input.tar.gz
[2025-06-06 14:15:59] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:38 start_atlas.sh
[2025-06-06 14:15:59] -rw-rw-r-- 1 boinc boinc         0 Jun  6 11:38 boinc_lockfile
[2025-06-06 14:15:59] -rw-rw-r-- 1 boinc boinc      2524 Jun  6 11:38 pandaJob.out
[2025-06-06 14:15:59] -rw------- 1 boinc boinc    985732 Jun  6 11:38 agis_schedconf.cvmfs.json
[2025-06-06 14:15:59] -rw------- 1 boinc boinc   1598969 Jun  6 11:38 agis_ddmendpoints.agis.ALL.json
[2025-06-06 14:15:59] drwx------ 4 boinc boinc      4096 Jun  6 11:39 pilot3
[2025-06-06 14:15:59] -rw------- 1 boinc boinc 184980857 Jun  6 14:09 HITS.45006595._056931.pool.root.1
[2025-06-06 14:15:59] -rw-rw-r-- 1 boinc boinc       529 Jun  6 14:11 boinc_task_state.xml
[2025-06-06 14:15:59] -rw------- 1 boinc boinc      1039 Jun  6 14:13 memory_monitor_summary.json
[2025-06-06 14:15:59] -rw------- 1 boinc boinc    419027 Jun  6 14:14 log.45006595._056931.job.log.tgz.1
[2025-06-06 14:15:59] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 14:15 boinc_mmap_file
[2025-06-06 14:15:59] -rw-rw-r-- 1 boinc boinc        27 Jun  6 14:15 wrapper_checkpoint.txt
[2025-06-06 14:15:59] -rw------- 1 boinc boinc        95 Jun  6 14:15 pilot_heartbeat.json
[2025-06-06 14:15:59] -rw------- 1 boinc boinc      7713 Jun  6 14:15 heartbeat.json
[2025-06-06 14:15:59] -rw------- 1 boinc boinc      4377 Jun  6 14:15 pilotlog.txt
[2025-06-06 14:15:59] -rw------- 1 boinc boinc    904478 Jun  6 14:15 log.45006595._056931.job.log.1
[2025-06-06 14:15:59] -rw------- 1 boinc boinc       357 Jun  6 14:15 output.list
[2025-06-06 14:15:59] -rw-rw-r-- 1 boinc boinc       620 Jun  6 14:15 runtime_log
[2025-06-06 14:15:59] -rw------- 1 boinc boinc   1341440 Jun  6 14:15 result.tar.gz
[2025-06-06 14:15:59] -rw-rw-r-- 1 boinc boinc      8978 Jun  6 14:15 runtime_log.err
[2025-06-06 14:15:59] -rw------- 1 boinc boinc       659 Jun  6 14:15 8c9KDmZUAh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm22nKDmvhkvYm.diag
[2025-06-06 14:15:59] -rw-rw-r-- 1 boinc boinc     20964 Jun  6 14:15 stderr.txt
[2025-06-06 14:15:59] HITS file was successfully produced:
[2025-06-06 14:15:59] -rw------- 1 boinc boinc 184980857 Jun  6 14:09 shared/HITS.pool.root.1
[2025-06-06 14:15:59]  *** Contents of shared directory: ***
[2025-06-06 14:15:59] total 392032
[2025-06-06 14:15:59] -rw-r--r-- 2 boinc boinc 214577005 Jun  6 11:38 ATLAS.root_0
[2025-06-06 14:15:59] -rw-r--r-- 2 boinc boinc    508881 Jun  6 11:38 input.tar.gz
[2025-06-06 14:15:59] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:38 start_atlas.sh
[2025-06-06 14:15:59] -rw------- 1 boinc boinc 184980857 Jun  6 14:09 HITS.pool.root.1
[2025-06-06 14:15:59] -rw------- 1 boinc boinc   1341440 Jun  6 14:15 result.tar.gz
14:16:00 (940347): run_atlas exited; CPU time 29137.282344
14:16:00 (940347): called boinc_finish(0)

</stderr_txt>
]]>

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