Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:05:20 (30803): wrapper (7.7.26015): starting
17:05:20 (30803): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 17:05:20] Arguments: --nthreads 8
[2025-06-04 17:05:20] Threads: 8
[2025-06-04 17:05:20] Checking for CVMFS
[2025-06-04 17:05:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:05:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:05:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:05:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:05:22] 2.11.2.0 96941 13193 326620 146793 0 670 17663273 18432001 18396 130560 0 72222209 99.587 55186781 45258 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 17:05:22] CVMFS is ok
[2025-06-04 17:05:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:05:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:05:22] Further information can be found at the LHC@home message board.
[2025-06-04 17:05:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:05:22] Checking for apptainer binary...
[2025-06-04 17:05:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:05:22] Running /usr/bin/apptainer --version
[2025-06-04 17:05:22] apptainer version 1.3.2-1.el7
[2025-06-04 17:05:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:05:27] c-212-6.aglt2.org
[2025-06-04 17:05:27] apptainer works
[2025-06-04 17:05:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 17:05:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 17:05:27] Starting ATLAS job with PandaID=6668231898
[2025-06-04 17:05:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:10:27]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:10:27] 2025-06-05 00:10:10,960 | INFO     | extracted standard info from prmon json
[2025-06-04 20:10:27] 2025-06-05 00:10:10,960 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:10:27] 2025-06-05 00:10:10,960 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:10:27] 2025-06-05 00:10:10,960 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:10:27] 2025-06-05 00:10:10,961 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:10:27] 2025-06-05 00:10:10,967 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:10:27] 2025-06-05 00:10:10,968 | INFO     | sum of square deviations: 1748745776.449437
[2025-06-04 20:10:27] 2025-06-05 00:10:10,969 | INFO     | sum of deviations: 49510888579.50564
[2025-06-04 20:10:27] 2025-06-05 00:10:10,969 | INFO     | mean x: 1749076756.516854
[2025-06-04 20:10:27] 2025-06-05 00:10:10,969 | INFO     | mean y: 2447940.8314606743
[2025-06-04 20:10:27] 2025-06-05 00:10:10,969 | INFO     | -- intersect: -49517811421.70085
[2025-06-04 20:10:27] 2025-06-05 00:10:10,969 | INFO     | intersect: -49517811421.70085
[2025-06-04 20:10:27] 2025-06-05 00:10:10,969 | INFO     | chi2: 2.890611173381857
[2025-06-04 20:10:27] 2025-06-05 00:10:10,969 | INFO     | sum of square deviations: 1605478888.9479809
[2025-06-04 20:10:27] 2025-06-05 00:10:10,976 | INFO     | sum of deviations: 47870761564.33528
[2025-06-04 20:10:27] 2025-06-05 00:10:10,976 | INFO     | mean x: 1749076604.0173411
[2025-06-04 20:10:27] 2025-06-05 00:10:10,976 | INFO     | mean y: 2446194.554913295
[2025-06-04 20:10:27] 2025-06-05 00:10:10,976 | INFO     | -- intersect: -52149986107.77001
[2025-06-04 20:10:27] 2025-06-05 00:10:10,977 | INFO     | intersect: -52149986107.77001
[2025-06-04 20:10:27] 2025-06-05 00:10:10,977 | INFO     | chi2: 2.894058578095085
[2025-06-04 20:10:27] 2025-06-05 00:10:10,977 | INFO     | current chi2=2.894058578095085 (change=-0.11926213891972617 %)
[2025-06-04 20:10:27] 2025-06-05 00:10:10,977 | INFO     | right removable region: 172
[2025-06-04 20:10:27] 2025-06-05 00:10:10,977 | INFO     | sum of square deviations: 1605477058.9479809
[2025-06-04 20:10:27] 2025-06-05 00:10:10,978 | INFO     | sum of deviations: 3726912431.8265896
[2025-06-04 20:10:27] 2025-06-05 00:10:10,978 | INFO     | mean x: 1749076909.0173411
[2025-06-04 20:10:27] 2025-06-05 00:10:10,978 | INFO     | mean y: 2496416.0578034683
[2025-06-04 20:10:27] 2025-06-05 00:10:10,978 | INFO     | -- intersect: -4057764949.9370656
[2025-06-04 20:10:27] 2025-06-05 00:10:10,978 | INFO     | intersect: -4057764949.9370656
[2025-06-04 20:10:27] 2025-06-05 00:10:10,978 | INFO     | chi2: 0.08040459900726242
[2025-06-04 20:10:27] 2025-06-05 00:10:10,978 | INFO     | current chi2=0.08040459900726242 (change=97.218422188786 %)
[2025-06-04 20:10:27] 2025-06-05 00:10:10,979 | INFO     | sum of square deviations: 1470255003.9464278
[2025-06-04 20:10:27] 2025-06-05 00:10:10,979 | INFO     | sum of deviations: -2127444111.9642854
[2025-06-04 20:10:27] 2025-06-05 00:10:10,979 | INFO     | mean x: 1749077061.517857
[2025-06-04 20:10:27] 2025-06-05 00:10:10,979 | INFO     | mean y: 2502924.654761905
[2025-06-04 20:10:27] 2025-06-05 00:10:10,980 | INFO     | -- intersect: 2533399732.290143
[2025-06-04 20:10:27] 2025-06-05 00:10:10,980 | INFO     | intersect: 2533399732.290143
[2025-06-04 20:10:27] 2025-06-05 00:10:10,984 | INFO     | chi2: 0.003954925884123849
[2025-06-04 20:10:27] 2025-06-05 00:10:10,984 | INFO     | current chi2=0.003954925884123849 (change=95.08121931711067 %)
[2025-06-04 20:10:27] 2025-06-05 00:10:10,984 | INFO     | sum of square deviations: 1342847048.9447916
[2025-06-04 20:10:27] 2025-06-05 00:10:10,985 | INFO     | sum of deviations: -2637487310.2822094
[2025-06-04 20:10:27] 2025-06-05 00:10:10,985 | INFO     | mean x: 1749077214.018405
[2025-06-04 20:10:27] 2025-06-05 00:10:10,985 | INFO     | mean y: 2503532.7607361963
[2025-06-04 20:10:27] 2025-06-05 00:10:10,985 | INFO     | -- intersect: 3437867940.2726183
[2025-06-04 20:10:27] 2025-06-05 00:10:10,985 | INFO     | intersect: 3437867940.2726183
[2025-06-04 20:10:27] 2025-06-05 00:10:10,985 | INFO     | chi2: 0.003272004774504586
[2025-06-04 20:10:27] 2025-06-05 00:10:10,985 | INFO     | current chi2=0.003272004774504586 (change=17.267608284663304 %)
[2025-06-04 20:10:27] 2025-06-05 00:10:10,985 | INFO     | left removable region: 30
[2025-06-04 20:10:27] 2025-06-05 00:10:10,986 | INFO     | sum of square deviations: 887817335.4366174
[2025-06-04 20:10:27] 2025-06-05 00:10:10,986 | INFO     | sum of deviations: -1981534205.1830993
[2025-06-04 20:10:27] 2025-06-05 00:10:10,986 | INFO     | mean x: 1749077488.5211267
[2025-06-04 20:10:27] 2025-06-05 00:10:10,986 | INFO     | mean y: 2502127.8943661973
[2025-06-04 20:10:27] 2025-06-05 00:10:10,986 | INFO     | -- intersect: 3906297123.4222445
[2025-06-04 20:10:27] 2025-06-05 00:10:10,986 | INFO     | intersect: 3906297123.4222445
[2025-06-04 20:10:27] 2025-06-05 00:10:10,987 | INFO     | chi2: 0.002841136833203377
[2025-06-04 20:10:27] 2025-06-05 00:10:10,987 | INFO     | -- intersect: 3906297123.4222445
[2025-06-04 20:10:27] 2025-06-05 00:10:10,987 | INFO     | current memory leak: -2.23 B/s (using 142 data points, chi2=0.00)
[2025-06-04 20:10:27] 2025-06-05 00:10:10,988 | INFO     | ..............................
[2025-06-04 20:10:27] 2025-06-05 00:10:10,988 | INFO     | . Timing measurements:
[2025-06-04 20:10:27] 2025-06-05 00:10:10,988 | INFO     | . get job = 0 s
[2025-06-04 20:10:27] 2025-06-05 00:10:10,992 | INFO     | . initial setup = 3 s
[2025-06-04 20:10:27] 2025-06-05 00:10:10,992 | INFO     | . payload setup = 54 s
[2025-06-04 20:10:27] 2025-06-05 00:10:10,992 | INFO     | . stage-in = 0 s
[2025-06-04 20:10:27] 2025-06-05 00:10:10,992 | INFO     | . payload execution = 10882 s
[2025-06-04 20:10:27] 2025-06-05 00:10:10,992 | INFO     | . stage-out = 2 s
[2025-06-04 20:10:27] 2025-06-05 00:10:10,992 | INFO     | . log creation = 0 s
[2025-06-04 20:10:27] 2025-06-05 00:10:10,992 | INFO     | ..............................
[2025-06-04 20:10:27] 2025-06-05 00:10:11,511 | INFO     | 
[2025-06-04 20:10:27] 2025-06-05 00:10:11,511 | INFO     | job summary report
[2025-06-04 20:10:27] 2025-06-05 00:10:11,511 | INFO     | --------------------------------------------------
[2025-06-04 20:10:27] 2025-06-05 00:10:11,511 | INFO     | PanDA job id: 6668231898
[2025-06-04 20:10:27] 2025-06-05 00:10:11,511 | INFO     | task id: 44871837
[2025-06-04 20:10:27] 2025-06-05 00:10:11,511 | INFO     | errors: (none)
[2025-06-04 20:10:27] 2025-06-05 00:10:11,511 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:10:27] 2025-06-05 00:10:11,511 | INFO     | pilot state: finished 
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | transexitcode: 0
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | exeerrorcode: 0
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | exeerrordiag: 
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | exitcode: 0
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | exitmsg: OK
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | cpuconsumptiontime: 43998 s
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | nevents: 400
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | neventsw: 0
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | pid: 61998
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | pgrp: 61998
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | corecount: 8
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | event service: False
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | sizes: {0: 2397392, 1: 2397392, 11: 2397420, 22: 2397448, 32: 2397682, 33: 2397710, 10940: 2426778, 10943: 2435719, 10944: 2435775, 10957: 2435945}
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | --------------------------------------------------
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | 
[2025-06-04 20:10:27] 2025-06-05 00:10:11,512 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-04 20:10:27] 2025-06-05 00:10:11,761 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,763 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,763 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,763 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:10:27] 2025-06-05 00:10:11,763 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,763 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:10:27] 2025-06-05 00:10:11,763 | INFO     | job 6668231898 has completed (purged errors)
[2025-06-04 20:10:27] 2025-06-05 00:10:11,763 | INFO     | overall cleanup function is called
[2025-06-04 20:10:27] 2025-06-05 00:10:12,772 | INFO     | --- collectZombieJob: --- 10, [61998]
[2025-06-04 20:10:27] 2025-06-05 00:10:12,772 | INFO     | zombie collector waiting for pid 61998
[2025-06-04 20:10:27] 2025-06-05 00:10:12,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:10:27] 2025-06-05 00:10:12,772 | INFO     | collected zombie processes
[2025-06-04 20:10:27] 2025-06-05 00:10:12,772 | INFO     | will attempt to kill all subprocesses of pid=61998
[2025-06-04 20:10:27] 2025-06-05 00:10:13,062 | INFO     | process IDs to be killed: [61998] (in reverse order)
[2025-06-04 20:10:27] 2025-06-05 00:10:13,238 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:10:27] 2025-06-05 00:10:13,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:10:27] 2025-06-05 00:10:13,248 | INFO     | did not find any defunct processes belonging to 61998
[2025-06-04 20:10:27] 2025-06-05 00:10:13,258 | INFO     | did not find any defunct processes belonging to 61998
[2025-06-04 20:10:27] 2025-06-05 00:10:13,258 | INFO     | ready for new job
[2025-06-04 20:10:27] 2025-06-05 00:10:13,259 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:10:27] 2025-06-05 00:10:13,261 | INFO     | **************************************
[2025-06-04 20:10:27] 2025-06-05 00:10:13,261 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:10:27] 2025-06-05 00:10:13,261 | INFO     | **************************************
[2025-06-04 20:10:27] 2025-06-05 00:10:13,261 | INFO     | 
[2025-06-04 20:10:27] 2025-06-05 00:10:13,266 | INFO     | architecture information:
[2025-06-04 20:10:27] 2025-06-05 00:10:13,266 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:10:27] 2025-06-05 00:10:13,343 | INFO     | cat /etc/os-release:
[2025-06-04 20:10:27] NAME="CentOS Linux"
[2025-06-04 20:10:27] VERSION="7 (Core)"
[2025-06-04 20:10:27] ID="centos"
[2025-06-04 20:10:27] ID_LIKE="rhel fedora"
[2025-06-04 20:10:27] VERSION_ID="7"
[2025-06-04 20:10:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:10:27] ANSI_COLOR="0;31"
[2025-06-04 20:10:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:10:27] HOME_URL="https://www.centos.org/"
[2025-06-04 20:10:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:10:27] 
[2025-06-04 20:10:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:10:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:10:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:10:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:10:27] 
[2025-06-04 20:10:27] 2025-06-05 00:10:13,343 | INFO     | **************************************
[2025-06-04 20:10:27] 2025-06-05 00:10:13,846 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-04 20:10:27] 2025-06-05 00:10:13,940 | INFO     | sufficient remaining disk space (106017325056 B)
[2025-06-04 20:10:27] 2025-06-05 00:10:13,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:10:27] 2025-06-05 00:10:13,941 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:10:27] 2025-06-05 00:10:13,941 | INFO     | update_server=False
[2025-06-04 20:10:27] 2025-06-05 00:10:13,941 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:10:27] 2025-06-05 00:10:13,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:10:27] 2025-06-05 00:10:13,941 | INFO     | aborting loop
[2025-06-04 20:10:27] 2025-06-05 00:10:14,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:10:27] 2025-06-05 00:10:14,468 | INFO     | all job control threads have been joined
[2025-06-04 20:10:27] 2025-06-05 00:10:14,572 | INFO     | PID=40310 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 20:10:27] 2025-06-05 00:10:14,572 | INFO     | .. there are 14 such processes running
[2025-06-04 20:10:27] 2025-06-05 00:10:14,572 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:10:27] 2025-06-05 00:10:14,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:10:27] 2025-06-05 00:10:14,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:10:27] 2025-06-05 00:10:14,621 | INFO     | all data control threads have been joined
[2025-06-04 20:10:27] 2025-06-05 00:10:14,947 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:14,952 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:15,025 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:15,158 | INFO     | all payload control threads have been joined
[2025-06-04 20:10:27] 2025-06-05 00:10:15,478 | INFO     | [job] control thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:15,626 | INFO     | [data] control thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:15,863 | INFO     | [job] validate thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:15,890 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:16,022 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:16,030 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:16,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:10:27] 2025-06-05 00:10:16,107 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:16,164 | INFO     | [payload] control thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:16,293 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:16,317 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:16,471 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:17,108 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:17,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:10:27] 2025-06-05 00:10:21,166 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:10:27] 2025-06-05 00:10:21,389 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140007823435584)>', '<ExcThread(monitor, started 140007402628864)>']
[2025-06-04 20:10:27] 2025-06-05 00:10:21,614 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:10:27] 2025-06-05 00:10:21,614 | INFO     | [monitor] control thread has ended
[2025-06-04 20:10:27] 2025-06-05 00:10:26,414 | INFO     | all workflow threads have been joined
[2025-06-04 20:10:27] 2025-06-05 00:10:26,414 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:10:27] 2025-06-05 00:10:26,415 | INFO     | traces error code: 0
[2025-06-04 20:10:27] 2025-06-05 00:10:26,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:10:27] 2025-06-05 00:10:26,535 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:10:27] 2025-06-05 00:10:26,559 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:10:27] 2025-06-05 00:10:26,562 [wrapper] pilotpid: 40310
[2025-06-04 20:10:27] 2025-06-05 00:10:26,565 [wrapper] Pilot exit status: 0
[2025-06-04 20:10:27] 2025-06-05 00:10:26,575 [wrapper] pandaids: 6668231898
[2025-06-04 20:10:27] 2025-06-05 00:10:26,620 [wrapper] cleanup supervisor_pilot 32981 40311
[2025-06-04 20:10:27] 2025-06-05 00:10:26,622 [wrapper] Test setup, not cleaning
[2025-06-04 20:10:27] 2025-06-05 00:10:26,625 [wrapper] apfmon messages muted
[2025-06-04 20:10:27] 2025-06-05 00:10:26,627 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:10:27] 2025-06-05 00:10:26,690 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:10:27]  *** Error codes and diagnostics ***
[2025-06-04 20:10:27]     "exeErrorCode": 0,
[2025-06-04 20:10:27]     "exeErrorDiag": "",
[2025-06-04 20:10:27]     "pilotErrorCode": 0,
[2025-06-04 20:10:27]     "pilotErrorDiag": "",
[2025-06-04 20:10:27]  *** Listing of results directory ***
[2025-06-04 20:10:27] total 419824
[2025-06-04 20:10:27] -rw-r--r-- 1 boincer umatlas    495897 May 28 04:01 pilot3.tar.gz
[2025-06-04 20:10:27] -rwx------ 1 boincer umatlas     37140 May 28 04:12 runpilot2-wrapper.sh
[2025-06-04 20:10:27] -rw-r--r-- 1 boincer umatlas      5111 May 28 04:12 queuedata.json
[2025-06-04 20:10:27] -rw-r--r-- 1 boincer umatlas       100 Jun  4 17:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:10:27] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 17:05 run_atlas
[2025-06-04 20:10:27] -rw-r--r-- 1 boincer umatlas       105 Jun  4 17:05 job.xml
[2025-06-04 20:10:27] -rw-r--r-- 2 boincer umatlas 227860537 Jun  4 17:05 EVNT.44871834._003165.pool.root.1
[2025-06-04 20:10:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 17:05 start_atlas.sh
[2025-06-04 20:10:27] drwxrwx--x 2 boincer umatlas      4096 Jun  4 17:05 shared
[2025-06-04 20:10:27] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 17:05 input.tar.gz
[2025-06-04 20:10:27] -rw-r--r-- 1 boincer umatlas         0 Jun  4 17:05 boinc_lockfile
[2025-06-04 20:10:27] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 17:05 pandaJob.out
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas    987032 Jun  4 17:06 agis_schedconf.cvmfs.json
[2025-06-04 20:10:27] drwx------ 4 boincer umatlas      4096 Jun  4 17:06 pilot3
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas 195480092 Jun  4 20:09 HITS.44871837._081077.pool.root.1
[2025-06-04 20:10:27] -rw-r--r-- 1 boincer umatlas       531 Jun  4 20:09 boinc_task_state.xml
[2025-06-04 20:10:27] -rw-r--r-- 1 boincer umatlas      6302 Jun  4 20:09 init_data.xml
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas      1076 Jun  4 20:09 memory_monitor_summary.json
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas        95 Jun  4 20:09 pilot_heartbeat.json
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas   1598969 Jun  4 20:09 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas    380901 Jun  4 20:09 log.44871837._081077.job.log.tgz.1
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas      7753 Jun  4 20:10 heartbeat.json
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas      4747 Jun  4 20:10 pilotlog.txt
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas    984670 Jun  4 20:10 log.44871837._081077.job.log.1
[2025-06-04 20:10:27] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 20:10 boinc_mmap_file
[2025-06-04 20:10:27] -rw-r--r-- 1 boincer umatlas        28 Jun  4 20:10 wrapper_checkpoint.txt
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas       357 Jun  4 20:10 output.list
[2025-06-04 20:10:27] -rw-r--r-- 1 boincer umatlas       620 Jun  4 20:10 runtime_log
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas   1382400 Jun  4 20:10 result.tar.gz
[2025-06-04 20:10:27] -rw-r--r-- 1 boincer umatlas      8655 Jun  4 20:10 runtime_log.err
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas       660 Jun  4 20:10 kucMDmA5Qe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmScbKDmwjxmym.diag
[2025-06-04 20:10:27] -rw-r--r-- 1 boincer umatlas     20978 Jun  4 20:10 stderr.txt
[2025-06-04 20:10:27] HITS file was successfully produced:
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas 195480092 Jun  4 20:09 shared/HITS.pool.root.1
[2025-06-04 20:10:27]  *** Contents of shared directory: ***
[2025-06-04 20:10:27] total 415296
[2025-06-04 20:10:27] -rw-r--r-- 2 boincer umatlas 227860537 Jun  4 17:05 ATLAS.root_0
[2025-06-04 20:10:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 17:05 start_atlas.sh
[2025-06-04 20:10:27] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 17:05 input.tar.gz
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas 195480092 Jun  4 20:09 HITS.pool.root.1
[2025-06-04 20:10:27] -rw------- 1 boincer umatlas   1382400 Jun  4 20:10 result.tar.gz
20:10:28 (30803): run_atlas exited; CPU time 43652.614469
20:10:28 (30803): called boinc_finish(0)

</stderr_txt>
]]>

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