Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:05:04 (26944): wrapper (7.7.26015): starting
17:05:04 (26944): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 17:05:04] Arguments: --nthreads 8
[2025-06-04 17:05:04] Threads: 8
[2025-06-04 17:05:04] Checking for CVMFS
[2025-06-04 17:05:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:05:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:05:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:05:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:05:06] 2.11.2.0 96941 13193 326292 146793 0 670 17663097 18432001 18357 130560 0 72216743 99.587 55186781 45258 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 17:05:06] CVMFS is ok
[2025-06-04 17:05:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:05:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:05:06] Further information can be found at the LHC@home message board.
[2025-06-04 17:05:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:05:06] Checking for apptainer binary...
[2025-06-04 17:05:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:05:06] Running /usr/bin/apptainer --version
[2025-06-04 17:05:06] apptainer version 1.3.2-1.el7
[2025-06-04 17:05:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:05:12] c-212-6.aglt2.org
[2025-06-04 17:05:12] apptainer works
[2025-06-04 17:05:12] Set ATHENA_PROC_NUMBER=8
[2025-06-04 17:05:12] Set ATHENA_CORE_NUMBER=8
[2025-06-04 17:05:12] Starting ATLAS job with PandaID=6668044044
[2025-06-04 17:05:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:14:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:14:45] 2025-06-05 00:14:26,356 | INFO     | mean x: 1749076881.532967
[2025-06-04 20:14:45] 2025-06-05 00:14:26,356 | INFO     | mean y: 2433152.8846153845
[2025-06-04 20:14:45] 2025-06-05 00:14:26,356 | INFO     | -- intersect: -56754822695.9004
[2025-06-04 20:14:45] 2025-06-05 00:14:26,356 | INFO     | intersect: -56754822695.9004
[2025-06-04 20:14:45] 2025-06-05 00:14:26,356 | INFO     | chi2: 2.868802721045132
[2025-06-04 20:14:45] 2025-06-05 00:14:26,356 | INFO     | sum of square deviations: 1719414693.7966082
[2025-06-04 20:14:45] 2025-06-05 00:14:26,357 | INFO     | sum of deviations: 58651454582.54241
[2025-06-04 20:14:45] 2025-06-05 00:14:26,357 | INFO     | mean x: 1749076729.0338984
[2025-06-04 20:14:45] 2025-06-05 00:14:26,357 | INFO     | mean y: 2431111.5762711866
[2025-06-04 20:14:45] 2025-06-05 00:14:26,357 | INFO     | -- intersect: -59660833779.917404
[2025-06-04 20:14:45] 2025-06-05 00:14:26,357 | INFO     | intersect: -59660833779.917404
[2025-06-04 20:14:45] 2025-06-05 00:14:26,358 | INFO     | chi2: 2.87042209973676
[2025-06-04 20:14:45] 2025-06-05 00:14:26,358 | INFO     | current chi2=2.87042209973676 (change=-0.05644789304431982 %)
[2025-06-04 20:14:45] 2025-06-05 00:14:26,358 | INFO     | right removable region: 176
[2025-06-04 20:14:45] 2025-06-05 00:14:26,358 | INFO     | sum of square deviations: 1719411033.7966082
[2025-06-04 20:14:45] 2025-06-05 00:14:26,359 | INFO     | sum of deviations: 14782663004.881353
[2025-06-04 20:14:45] 2025-06-05 00:14:26,359 | INFO     | mean x: 1749077034.0338984
[2025-06-04 20:14:45] 2025-06-05 00:14:26,359 | INFO     | mean y: 2479582.853107345
[2025-06-04 20:14:45] 2025-06-05 00:14:26,359 | INFO     | -- intersect: -15035237318.735104
[2025-06-04 20:14:45] 2025-06-05 00:14:26,359 | INFO     | intersect: -15035237318.735104
[2025-06-04 20:14:45] 2025-06-05 00:14:26,359 | INFO     | chi2: 0.15656146610497215
[2025-06-04 20:14:45] 2025-06-05 00:14:26,359 | INFO     | current chi2=0.15656146610497215 (change=94.5426199941718 %)
[2025-06-04 20:14:45] 2025-06-05 00:14:26,359 | INFO     | sum of square deviations: 1577769338.7906997
[2025-06-04 20:14:45] 2025-06-05 00:14:26,360 | INFO     | sum of deviations: 4452704613.372092
[2025-06-04 20:14:45] 2025-06-05 00:14:26,360 | INFO     | mean x: 1749077186.5348837
[2025-06-04 20:14:45] 2025-06-05 00:14:26,360 | INFO     | mean y: 2490676.604651163
[2025-06-04 20:14:45] 2025-06-05 00:14:26,360 | INFO     | -- intersect: -4933670691.315616
[2025-06-04 20:14:45] 2025-06-05 00:14:26,360 | INFO     | intersect: -4933670691.315616
[2025-06-04 20:14:45] 2025-06-05 00:14:26,361 | INFO     | chi2: 0.04123259542303327
[2025-06-04 20:14:45] 2025-06-05 00:14:26,361 | INFO     | current chi2=0.04123259542303327 (change=73.66363738866151 %)
[2025-06-04 20:14:45] 2025-06-05 00:14:26,361 | INFO     | sum of square deviations: 1444127793.784426
[2025-06-04 20:14:45] 2025-06-05 00:14:26,362 | INFO     | sum of deviations: -6854197.317364968
[2025-06-04 20:14:45] 2025-06-05 00:14:26,362 | INFO     | mean x: 1749077339.0359282
[2025-06-04 20:14:45] 2025-06-05 00:14:26,362 | INFO     | mean y: 2495703.886227545
[2025-06-04 20:14:45] 2025-06-05 00:14:26,362 | INFO     | -- intersect: 10797269.202457113
[2025-06-04 20:14:45] 2025-06-05 00:14:26,362 | INFO     | intersect: 10797269.202457113
[2025-06-04 20:14:45] 2025-06-05 00:14:26,362 | INFO     | chi2: 0.0028556638650836788
[2025-06-04 20:14:45] 2025-06-05 00:14:26,362 | INFO     | current chi2=0.0028556638650836788 (change=93.07425633582976 %)
[2025-06-04 20:14:45] 2025-06-05 00:14:26,362 | INFO     | sum of square deviations: 1318253836.277778
[2025-06-04 20:14:45] 2025-06-05 00:14:26,363 | INFO     | sum of deviations: -485819834.6296294
[2025-06-04 20:14:45] 2025-06-05 00:14:26,363 | INFO     | mean x: 1749077491.5370371
[2025-06-04 20:14:45] 2025-06-05 00:14:26,363 | INFO     | mean y: 2496280.2716049384
[2025-06-04 20:14:45] 2025-06-05 00:14:26,363 | INFO     | -- intersect: 647088781.5854996
[2025-06-04 20:14:45] 2025-06-05 00:14:26,363 | INFO     | intersect: 647088781.5854996
[2025-06-04 20:14:45] 2025-06-05 00:14:26,363 | INFO     | chi2: 0.0024843252196280865
[2025-06-04 20:14:45] 2025-06-05 00:14:26,363 | INFO     | current chi2=0.0024843252196280865 (change=13.003583859990156 %)
[2025-06-04 20:14:45] 2025-06-05 00:14:26,364 | INFO     | left removable region: 40
[2025-06-04 20:14:45] 2025-06-05 00:14:26,364 | INFO     | sum of square deviations: 779938747.8161771
[2025-06-04 20:14:45] 2025-06-05 00:14:26,364 | INFO     | sum of deviations: 233766554.5588233
[2025-06-04 20:14:45] 2025-06-05 00:14:26,364 | INFO     | mean x: 1749077918.5367646
[2025-06-04 20:14:45] 2025-06-05 00:14:26,364 | INFO     | mean y: 2494412.088235294
[2025-06-04 20:14:45] 2025-06-05 00:14:26,364 | INFO     | -- intersect: -521746651.4774707
[2025-06-04 20:14:45] 2025-06-05 00:14:26,364 | INFO     | intersect: -521746651.4774707
[2025-06-04 20:14:45] 2025-06-05 00:14:26,365 | INFO     | chi2: 0.0018576613659618834
[2025-06-04 20:14:45] 2025-06-05 00:14:26,365 | INFO     | -- intersect: -521746651.4774707
[2025-06-04 20:14:45] 2025-06-05 00:14:26,365 | INFO     | current memory leak: 0.30 B/s (using 136 data points, chi2=0.00)
[2025-06-04 20:14:45] 2025-06-05 00:14:26,365 | INFO     | ..............................
[2025-06-04 20:14:45] 2025-06-05 00:14:26,366 | INFO     | . Timing measurements:
[2025-06-04 20:14:45] 2025-06-05 00:14:26,366 | INFO     | . get job = 0 s
[2025-06-04 20:14:45] 2025-06-05 00:14:26,366 | INFO     | . initial setup = 3 s
[2025-06-04 20:14:45] 2025-06-05 00:14:26,366 | INFO     | . payload setup = 58 s
[2025-06-04 20:14:45] 2025-06-05 00:14:26,366 | INFO     | . stage-in = 0 s
[2025-06-04 20:14:45] 2025-06-05 00:14:26,366 | INFO     | . payload execution = 11147 s
[2025-06-04 20:14:45] 2025-06-05 00:14:26,366 | INFO     | . stage-out = 1 s
[2025-06-04 20:14:45] 2025-06-05 00:14:26,366 | INFO     | . log creation = 0 s
[2025-06-04 20:14:45] 2025-06-05 00:14:26,366 | INFO     | ..............................
[2025-06-04 20:14:45] 2025-06-05 00:14:26,442 | INFO     | 
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | job summary report
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | --------------------------------------------------
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | PanDA job id: 6668044044
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | task id: 44871837
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | errors: (none)
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | pilot state: finished 
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | transexitcode: 0
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | exeerrorcode: 0
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | exeerrordiag: 
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | exitcode: 0
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | exitmsg: OK
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | cpuconsumptiontime: 42760 s
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | nevents: 400
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | neventsw: 0
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | pid: 62000
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | pgrp: 62000
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | corecount: 8
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | event service: False
[2025-06-04 20:14:45] 2025-06-05 00:14:26,443 | INFO     | sizes: {0: 2397390, 11: 2397390, 22: 2397418, 30: 2397652, 32: 2397680, 11210: 2426823, 11212: 2435820, 11217: 2435934}
[2025-06-04 20:14:45] 2025-06-05 00:14:26,444 | INFO     | --------------------------------------------------
[2025-06-04 20:14:45] 2025-06-05 00:14:26,444 | INFO     | 
[2025-06-04 20:14:45] 2025-06-05 00:14:26,444 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 20:14:45] 2025-06-05 00:14:26,473 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,474 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,474 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,474 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:14:45] 2025-06-05 00:14:26,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:14:45] 2025-06-05 00:14:26,475 | INFO     | job 6668044044 has completed (purged errors)
[2025-06-04 20:14:45] 2025-06-05 00:14:26,475 | INFO     | overall cleanup function is called
[2025-06-04 20:14:45] 2025-06-05 00:14:27,484 | INFO     | --- collectZombieJob: --- 10, [62000]
[2025-06-04 20:14:45] 2025-06-05 00:14:27,484 | INFO     | zombie collector waiting for pid 62000
[2025-06-04 20:14:45] 2025-06-05 00:14:27,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:14:45] 2025-06-05 00:14:27,484 | INFO     | collected zombie processes
[2025-06-04 20:14:45] 2025-06-05 00:14:27,484 | INFO     | will attempt to kill all subprocesses of pid=62000
[2025-06-04 20:14:45] 2025-06-05 00:14:27,680 | INFO     | process IDs to be killed: [62000] (in reverse order)
[2025-06-04 20:14:45] 2025-06-05 00:14:27,758 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:14:45] 2025-06-05 00:14:27,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:14:45] 2025-06-05 00:14:27,766 | INFO     | did not find any defunct processes belonging to 62000
[2025-06-04 20:14:45] 2025-06-05 00:14:27,773 | INFO     | did not find any defunct processes belonging to 62000
[2025-06-04 20:14:45] 2025-06-05 00:14:27,773 | INFO     | ready for new job
[2025-06-04 20:14:45] 2025-06-05 00:14:27,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:14:45] 2025-06-05 00:14:27,775 | INFO     | **************************************
[2025-06-04 20:14:45] 2025-06-05 00:14:27,775 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:14:45] 2025-06-05 00:14:27,775 | INFO     | **************************************
[2025-06-04 20:14:45] 2025-06-05 00:14:27,775 | INFO     | 
[2025-06-04 20:14:45] 2025-06-05 00:14:27,779 | INFO     | architecture information:
[2025-06-04 20:14:45] 2025-06-05 00:14:27,780 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:14:45] 2025-06-05 00:14:27,793 | INFO     | cat /etc/os-release:
[2025-06-04 20:14:45] NAME="CentOS Linux"
[2025-06-04 20:14:45] VERSION="7 (Core)"
[2025-06-04 20:14:45] ID="centos"
[2025-06-04 20:14:45] ID_LIKE="rhel fedora"
[2025-06-04 20:14:45] VERSION_ID="7"
[2025-06-04 20:14:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:14:45] ANSI_COLOR="0;31"
[2025-06-04 20:14:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:14:45] HOME_URL="https://www.centos.org/"
[2025-06-04 20:14:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:14:45] 
[2025-06-04 20:14:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:14:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:14:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:14:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:14:45] 
[2025-06-04 20:14:45] 2025-06-05 00:14:27,793 | INFO     | **************************************
[2025-06-04 20:14:45] 2025-06-05 00:14:28,297 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 20:14:45] 2025-06-05 00:14:28,312 | INFO     | sufficient remaining disk space (106248011776 B)
[2025-06-04 20:14:45] 2025-06-05 00:14:28,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:14:45] 2025-06-05 00:14:28,312 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:14:45] 2025-06-05 00:14:28,312 | INFO     | update_server=False
[2025-06-04 20:14:45] 2025-06-05 00:14:28,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:14:45] 2025-06-05 00:14:28,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:14:45] 2025-06-05 00:14:28,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:14:45] 2025-06-05 00:14:28,313 | INFO     | aborting loop
[2025-06-04 20:14:45] 2025-06-05 00:14:28,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:14:45] 2025-06-05 00:14:28,313 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 20:14:45] 2025-06-05 00:14:28,313 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:14:45] 2025-06-05 00:14:28,314 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:14:45] 2025-06-05 00:14:28,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:14:45] 2025-06-05 00:14:28,455 | INFO     | all data control threads have been joined
[2025-06-04 20:14:45] 2025-06-05 00:14:28,668 | INFO     | all payload control threads have been joined
[2025-06-04 20:14:45] 2025-06-05 00:14:29,318 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:29,318 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:29,319 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:29,389 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:29,460 | INFO     | [data] control thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:29,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:14:45] 2025-06-05 00:14:29,593 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:29,673 | INFO     | [payload] control thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:29,696 | INFO     | all job control threads have been joined
[2025-06-04 20:14:45] 2025-06-05 00:14:30,000 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:30,101 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:30,216 | INFO     | [job] validate thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:30,301 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:30,702 | INFO     | [job] control thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:30,769 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:31,497 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:32,321 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:38,643 | INFO     | job.realtimelogging is not enabled
[2025-06-04 20:14:45] 2025-06-05 00:14:39,648 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:14:45] 2025-06-05 00:14:40,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717154219840)>', '<ExcThread(monitor, started 140716835575552)>']
[2025-06-04 20:14:45] 2025-06-05 00:14:41,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:14:45] 2025-06-05 00:14:41,375 | INFO     | [monitor] control thread has ended
[2025-06-04 20:14:45] 2025-06-05 00:14:45,574 | INFO     | all workflow threads have been joined
[2025-06-04 20:14:45] 2025-06-05 00:14:45,574 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:14:45] 2025-06-05 00:14:45,574 | INFO     | traces error code: 0
[2025-06-04 20:14:45] 2025-06-05 00:14:45,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:14:45] 2025-06-05 00:14:45,682 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:14:45] 2025-06-05 00:14:45,684 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:14:45] 2025-06-05 00:14:45,686 [wrapper] pilotpid: 38604
[2025-06-04 20:14:45] 2025-06-05 00:14:45,688 [wrapper] Pilot exit status: 0
[2025-06-04 20:14:45] 2025-06-05 00:14:45,696 [wrapper] pandaids: 6668044044
[2025-06-04 20:14:45] 2025-06-05 00:14:45,751 [wrapper] cleanup supervisor_pilot 32949 38605
[2025-06-04 20:14:45] 2025-06-05 00:14:45,754 [wrapper] Test setup, not cleaning
[2025-06-04 20:14:45] 2025-06-05 00:14:45,756 [wrapper] apfmon messages muted
[2025-06-04 20:14:45] 2025-06-05 00:14:45,759 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:14:45] 2025-06-05 00:14:45,761 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:14:45]  *** Error codes and diagnostics ***
[2025-06-04 20:14:45]     "exeErrorCode": 0,
[2025-06-04 20:14:45]     "exeErrorDiag": "",
[2025-06-04 20:14:45]     "pilotErrorCode": 0,
[2025-06-04 20:14:45]     "pilotErrorDiag": "",
[2025-06-04 20:14:45]  *** Listing of results directory ***
[2025-06-04 20:14:45] total 409000
[2025-06-04 20:14:45] -rw-r--r-- 1 boincer umatlas    495897 May 28 00:31 pilot3.tar.gz
[2025-06-04 20:14:45] -rw-r--r-- 1 boincer umatlas      5111 May 28 00:50 queuedata.json
[2025-06-04 20:14:45] -rwx------ 1 boincer umatlas     37140 May 28 00:51 runpilot2-wrapper.sh
[2025-06-04 20:14:45] -rw-r--r-- 1 boincer umatlas       100 Jun  4 17:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:14:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 17:05 run_atlas
[2025-06-04 20:14:45] -rw-r--r-- 1 boincer umatlas       105 Jun  4 17:05 job.xml
[2025-06-04 20:14:45] -rw-r--r-- 2 boincer umatlas 224123958 Jun  4 17:05 EVNT.44871834._003085.pool.root.1
[2025-06-04 20:14:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 17:05 start_atlas.sh
[2025-06-04 20:14:45] drwxrwx--x 2 boincer umatlas      4096 Jun  4 17:05 shared
[2025-06-04 20:14:45] -rw-r--r-- 2 boincer umatlas    508870 Jun  4 17:05 input.tar.gz
[2025-06-04 20:14:45] -rw-r--r-- 1 boincer umatlas         0 Jun  4 17:05 boinc_lockfile
[2025-06-04 20:14:45] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 17:05 pandaJob.out
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas    987032 Jun  4 17:06 agis_schedconf.cvmfs.json
[2025-06-04 20:14:45] drwx------ 4 boincer umatlas      4096 Jun  4 17:06 pilot3
[2025-06-04 20:14:45] -rw-r--r-- 1 boincer umatlas      6302 Jun  4 20:09 init_data.xml
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas        95 Jun  4 20:13 pilot_heartbeat.json
[2025-06-04 20:14:45] -rw-r--r-- 1 boincer umatlas       530 Jun  4 20:13 boinc_task_state.xml
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas 188119569 Jun  4 20:13 HITS.44871837._078926.pool.root.1
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas      1079 Jun  4 20:14 memory_monitor_summary.json
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas   1598969 Jun  4 20:14 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas    358278 Jun  4 20:14 log.44871837._078926.job.log.tgz.1
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas      7752 Jun  4 20:14 heartbeat.json
[2025-06-04 20:14:45] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 20:14 boinc_mmap_file
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas      4549 Jun  4 20:14 pilotlog.txt
[2025-06-04 20:14:45] -rw-r--r-- 1 boincer umatlas        28 Jun  4 20:14 wrapper_checkpoint.txt
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas   1013443 Jun  4 20:14 log.44871837._078926.job.log.1
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas       357 Jun  4 20:14 output.list
[2025-06-04 20:14:45] -rw-r--r-- 1 boincer umatlas       620 Jun  4 20:14 runtime_log
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas   1392640 Jun  4 20:14 result.tar.gz
[2025-06-04 20:14:45] -rw-r--r-- 1 boincer umatlas      8655 Jun  4 20:14 runtime_log.err
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas       660 Jun  4 20:14 qnxLDmpwNe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxIbKDmcSTYJn.diag
[2025-06-04 20:14:45] -rw-r--r-- 1 boincer umatlas     20833 Jun  4 20:14 stderr.txt
[2025-06-04 20:14:45] HITS file was successfully produced:
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas 188119569 Jun  4 20:13 shared/HITS.pool.root.1
[2025-06-04 20:14:45]  *** Contents of shared directory: ***
[2025-06-04 20:14:45] total 404464
[2025-06-04 20:14:45] -rw-r--r-- 2 boincer umatlas 224123958 Jun  4 17:05 ATLAS.root_0
[2025-06-04 20:14:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 17:05 start_atlas.sh
[2025-06-04 20:14:45] -rw-r--r-- 2 boincer umatlas    508870 Jun  4 17:05 input.tar.gz
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas 188119569 Jun  4 20:13 HITS.pool.root.1
[2025-06-04 20:14:45] -rw------- 1 boincer umatlas   1392640 Jun  4 20:14 result.tar.gz
20:14:47 (26944): run_atlas exited; CPU time 42396.182771
20:14:47 (26944): called boinc_finish(0)

</stderr_txt>
]]>

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