Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:02:23 (285314): wrapper (7.7.26015): starting
17:02:23 (285314): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 17:02:23] Arguments: --nthreads 9
[2025-06-04 17:02:23] Threads: 9
[2025-06-04 17:02:23] Checking for CVMFS
[2025-06-04 17:02:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:02:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:02:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:02:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:02:24] 2.11.2.0 5225 29297 234024 146793 2 125 12305751 18432001 7762 130560 0 58901546 99.422 70715099 29481 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 17:02:24] CVMFS is ok
[2025-06-04 17:02:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:02:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:02:24] Further information can be found at the LHC@home message board.
[2025-06-04 17:02:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:02:24] Checking for apptainer binary...
[2025-06-04 17:02:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:02:24] Running /usr/bin/apptainer --version
[2025-06-04 17:02:24] apptainer version 1.3.2-1.el7
[2025-06-04 17:02:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:02:24] c-210-33-2.aglt2.org
[2025-06-04 17:02:24] apptainer works
[2025-06-04 17:02:24] Set ATHENA_PROC_NUMBER=9
[2025-06-04 17:02:24] Set ATHENA_CORE_NUMBER=9
[2025-06-04 17:02:25] Starting ATLAS job with PandaID=6677862440
[2025-06-04 17:02:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:35:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:35:28]  guid=c41a6797-4c92-4278-9878-a4a8df3cc502
[2025-06-04 18:35:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 18:35:28]  is_altstaged=None
[2025-06-04 18:35:28]  is_tar=False
[2025-06-04 18:35:28]  lfn=log.45006595._040430.job.log.tgz.1
[2025-06-04 18:35:28]  mtime=0
[2025-06-04 18:35:28]  protocol_id=None
[2025-06-04 18:35:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 18:35:28]  replicas=None
[2025-06-04 18:35:28]  scope=mc23_13p6TeV
[2025-06-04 18:35:28]  status=None
[2025-06-04 18:35:28]  status_code=0
[2025-06-04 18:35:28]  storage_token=
[2025-06-04 18:35:28]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677862440/log.45006595._040430.job.log.tgz.1
[2025-06-04 18:35:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/9e/log.45006595._040430.job.log.tgz.1
[2025-06-04 18:35:28]  workdir=None
[2025-06-04 18:35:28] ]
[2025-06-04 18:35:28] 2025-06-04 22:35:03,027 | INFO     | transferring file log.45006595._040430.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677862440/log.45006595._040430.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 18:35:28] 2025-06-04 22:35:03,027 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677862440/log.45006595._040430.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._040430.job
[2025-06-04 18:35:28] 2025-06-04 22:35:03,045 | INFO     | adding to output.list: log.45006595._040430.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/9e/log.45006595._040430.job.log.tg
[2025-06-04 18:35:28] 2025-06-04 22:35:03,045 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 18:35:28] 2025-06-04 22:35:03,046 | INFO     | summary of transferred files:
[2025-06-04 18:35:28] 2025-06-04 22:35:03,046 | INFO     |  -- lfn=log.45006595._040430.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 18:35:28] 2025-06-04 22:35:03,046 | INFO     | stage-out finished correctly
[2025-06-04 18:35:28] 2025-06-04 22:35:03,122 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 18:35:28] 2025-06-04 22:35:03,292 | INFO     | job 6677862440 has state=finished
[2025-06-04 18:35:28] 2025-06-04 22:35:03,292 | INFO     | preparing for final server update for job 6677862440 in state='finished'
[2025-06-04 18:35:28] 2025-06-04 22:35:03,293 | INFO     | this job has now completed (state=finished)
[2025-06-04 18:35:28] 2025-06-04 22:35:03,293 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 18:35:28] 2025-06-04 22:35:03,294 | INFO     | log transfer has been attempted: DONE
[2025-06-04 18:35:28] 2025-06-04 22:35:03,294 | INFO     | job 6677862440 has finished - writing final server update
[2025-06-04 18:35:28] 2025-06-04 22:35:03,294 | INFO     | total number of processed events: 400 (read)
[2025-06-04 18:35:28] 2025-06-04 22:35:03,301 | INFO     | executing command: lscpu
[2025-06-04 18:35:28] 2025-06-04 22:35:03,357 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 18:35:28] 2025-06-04 22:35:05,398 | INFO     | monitor loop #409: job 0:6677862440 is in state 'finished'
[2025-06-04 18:35:28] 2025-06-04 22:35:05,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:35:28] 2025-06-04 22:35:07,902 | INFO     | monitor loop #410: job 0:6677862440 is in state 'finished'
[2025-06-04 18:35:28] 2025-06-04 22:35:07,902 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:35:28] 2025-06-04 22:35:08,977 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 18:35:28] 2025-06-04 22:35:08,977 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677862440/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:35:28] 2025-06-04 22:35:08,978 | INFO     | extracted standard info from prmon json
[2025-06-04 18:35:28] 2025-06-04 22:35:08,978 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:35:28] 2025-06-04 22:35:08,978 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:35:28] 2025-06-04 22:35:08,978 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:35:28] 2025-06-04 22:35:08,978 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:35:28] 2025-06-04 22:35:08,980 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:35:28] 2025-06-04 22:35:08,981 | INFO     | sum of square deviations: 183761585.0
[2025-06-04 18:35:28] 2025-06-04 22:35:08,981 | INFO     | sum of deviations: -174244761.50000003
[2025-06-04 18:35:28] 2025-06-04 22:35:08,981 | INFO     | mean x: 1749073820.5
[2025-06-04 18:35:28] 2025-06-04 22:35:08,981 | INFO     | mean y: 2530143.273809524
[2025-06-04 18:35:28] 2025-06-04 22:35:08,981 | INFO     | -- intersect: 1661021229.421746
[2025-06-04 18:35:28] 2025-06-04 22:35:08,981 | INFO     | intersect: 1661021229.421746
[2025-06-04 18:35:28] 2025-06-04 22:35:08,982 | INFO     | chi2: 0.0038598637343354573
[2025-06-04 18:35:28] 2025-06-04 22:35:08,982 | INFO     | -- intersect: 1661021229.421746
[2025-06-04 18:35:28] 2025-06-04 22:35:08,982 | INFO     | current memory leak: -0.95 B/s (using 84 data points, chi2=0.00)
[2025-06-04 18:35:28] 2025-06-04 22:35:08,982 | INFO     | ..............................
[2025-06-04 18:35:28] 2025-06-04 22:35:08,982 | INFO     | . Timing measurements:
[2025-06-04 18:35:28] 2025-06-04 22:35:08,982 | INFO     | . get job = 0 s
[2025-06-04 18:35:28] 2025-06-04 22:35:08,983 | INFO     | . initial setup = 2 s
[2025-06-04 18:35:28] 2025-06-04 22:35:08,983 | INFO     | . payload setup = 7 s
[2025-06-04 18:35:28] 2025-06-04 22:35:08,983 | INFO     | . stage-in = 0 s
[2025-06-04 18:35:28] 2025-06-04 22:35:08,983 | INFO     | . payload execution = 5519 s
[2025-06-04 18:35:28] 2025-06-04 22:35:08,983 | INFO     | . stage-out = 0 s
[2025-06-04 18:35:28] 2025-06-04 22:35:08,983 | INFO     | . log creation = 0 s
[2025-06-04 18:35:28] 2025-06-04 22:35:08,983 | INFO     | ..............................
[2025-06-04 18:35:28] 2025-06-04 22:35:09,072 | INFO     | 
[2025-06-04 18:35:28] 2025-06-04 22:35:09,072 | INFO     | job summary report
[2025-06-04 18:35:28] 2025-06-04 22:35:09,073 | INFO     | --------------------------------------------------
[2025-06-04 18:35:28] 2025-06-04 22:35:09,073 | INFO     | PanDA job id: 6677862440
[2025-06-04 18:35:28] 2025-06-04 22:35:09,073 | INFO     | task id: 45006595
[2025-06-04 18:35:28] 2025-06-04 22:35:09,073 | INFO     | errors: (none)
[2025-06-04 18:35:28] 2025-06-04 22:35:09,073 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:35:28] 2025-06-04 22:35:09,073 | INFO     | pilot state: finished 
[2025-06-04 18:35:28] 2025-06-04 22:35:09,073 | INFO     | transexitcode: 0
[2025-06-04 18:35:28] 2025-06-04 22:35:09,073 | INFO     | exeerrorcode: 0
[2025-06-04 18:35:28] 2025-06-04 22:35:09,074 | INFO     | exeerrordiag: 
[2025-06-04 18:35:28] 2025-06-04 22:35:09,074 | INFO     | exitcode: 0
[2025-06-04 18:35:28] 2025-06-04 22:35:09,074 | INFO     | exitmsg: OK
[2025-06-04 18:35:28] 2025-06-04 22:35:09,074 | INFO     | cpuconsumptiontime: 34129 s
[2025-06-04 18:35:28] 2025-06-04 22:35:09,074 | INFO     | nevents: 400
[2025-06-04 18:35:28] 2025-06-04 22:35:09,074 | INFO     | neventsw: 0
[2025-06-04 18:35:28] 2025-06-04 22:35:09,074 | INFO     | pid: 26866
[2025-06-04 18:35:28] 2025-06-04 22:35:09,074 | INFO     | pgrp: 26866
[2025-06-04 18:35:28] 2025-06-04 22:35:09,075 | INFO     | corecount: 9
[2025-06-04 18:35:28] 2025-06-04 22:35:09,075 | INFO     | event service: False
[2025-06-04 18:35:28] 2025-06-04 22:35:09,075 | INFO     | sizes: {0: 2397342, 4: 2397548, 11: 2397576, 5530: 2424006, 5531: 2424005, 5532: 2433186, 5538: 2433300}
[2025-06-04 18:35:28] 2025-06-04 22:35:09,075 | INFO     | --------------------------------------------------
[2025-06-04 18:35:28] 2025-06-04 22:35:09,075 | INFO     | 
[2025-06-04 18:35:28] 2025-06-04 22:35:09,075 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 18:35:28] 2025-06-04 22:35:09,119 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,119 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,121 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:35:28] 2025-06-04 22:35:09,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,121 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:35:28] 2025-06-04 22:35:09,121 | INFO     | job 6677862440 has completed (purged errors)
[2025-06-04 18:35:28] 2025-06-04 22:35:09,121 | INFO     | overall cleanup function is called
[2025-06-04 18:35:28] 2025-06-04 22:35:10,128 | INFO     | --- collectZombieJob: --- 10, [26866]
[2025-06-04 18:35:28] 2025-06-04 22:35:10,129 | INFO     | zombie collector waiting for pid 26866
[2025-06-04 18:35:28] 2025-06-04 22:35:10,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:35:28] 2025-06-04 22:35:10,129 | INFO     | collected zombie processes
[2025-06-04 18:35:28] 2025-06-04 22:35:10,129 | INFO     | will attempt to kill all subprocesses of pid=26866
[2025-06-04 18:35:28] 2025-06-04 22:35:10,308 | INFO     | process IDs to be killed: [26866] (in reverse order)
[2025-06-04 18:35:28] 2025-06-04 22:35:10,403 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:35:28] 2025-06-04 22:35:10,404 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:35:28] 2025-06-04 22:35:10,410 | INFO     | did not find any defunct processes belonging to 26866
[2025-06-04 18:35:28] 2025-06-04 22:35:10,417 | INFO     | did not find any defunct processes belonging to 26866
[2025-06-04 18:35:28] 2025-06-04 22:35:10,417 | INFO     | ready for new job
[2025-06-04 18:35:28] 2025-06-04 22:35:10,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:35:28] 2025-06-04 22:35:10,419 | INFO     | **************************************
[2025-06-04 18:35:28] 2025-06-04 22:35:10,419 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:35:28] 2025-06-04 22:35:10,419 | INFO     | **************************************
[2025-06-04 18:35:28] 2025-06-04 22:35:10,419 | INFO     | 
[2025-06-04 18:35:28] 2025-06-04 22:35:10,422 | INFO     | architecture information:
[2025-06-04 18:35:28] 2025-06-04 22:35:10,423 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:35:28] 2025-06-04 22:35:10,439 | INFO     | cat /etc/os-release:
[2025-06-04 18:35:28] NAME="CentOS Linux"
[2025-06-04 18:35:28] VERSION="7 (Core)"
[2025-06-04 18:35:28] ID="centos"
[2025-06-04 18:35:28] ID_LIKE="rhel fedora"
[2025-06-04 18:35:28] VERSION_ID="7"
[2025-06-04 18:35:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:35:28] ANSI_COLOR="0;31"
[2025-06-04 18:35:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:35:28] HOME_URL="https://www.centos.org/"
[2025-06-04 18:35:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:35:28] 
[2025-06-04 18:35:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:35:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:35:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:35:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:35:28] 
[2025-06-04 18:35:28] 2025-06-04 22:35:10,439 | INFO     | **************************************
[2025-06-04 18:35:28] 2025-06-04 22:35:10,941 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 18:35:28] 2025-06-04 22:35:10,977 | INFO     | sufficient remaining disk space (56895733760 B)
[2025-06-04 18:35:28] 2025-06-04 22:35:10,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:35:28] 2025-06-04 22:35:10,982 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:35:28] 2025-06-04 22:35:10,982 | INFO     | update_server=False
[2025-06-04 18:35:28] 2025-06-04 22:35:10,983 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:35:28] 2025-06-04 22:35:10,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:35:28] 2025-06-04 22:35:11,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:35:28] 2025-06-04 22:35:11,144 | INFO     | PID=5795 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 18:35:28] 2025-06-04 22:35:11,145 | INFO     | .. there are 10 such processes running
[2025-06-04 18:35:28] 2025-06-04 22:35:11,145 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:35:28] 2025-06-04 22:35:11,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:35:28] 2025-06-04 22:35:11,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:35:28] 2025-06-04 22:35:11,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:35:28] 2025-06-04 22:35:11,412 | INFO     | aborting loop
[2025-06-04 18:35:28] 2025-06-04 22:35:11,641 | INFO     | all data control threads have been joined
[2025-06-04 18:35:28] 2025-06-04 22:35:11,988 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:11,994 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:12,134 | INFO     | all job control threads have been joined
[2025-06-04 18:35:28] 2025-06-04 22:35:12,168 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:12,417 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:12,432 | INFO     | all payload control threads have been joined
[2025-06-04 18:35:28] 2025-06-04 22:35:12,552 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:12,596 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:12,611 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:12,646 | INFO     | [data] control thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:12,981 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:13,028 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:13,139 | INFO     | [job] control thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:13,140 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:13,181 | INFO     | [job] validate thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:13,438 | INFO     | [payload] control thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:13,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:35:28] 2025-06-04 22:35:17,719 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:21,102 | INFO     | job.realtimelogging is not enabled
[2025-06-04 18:35:28] 2025-06-04 22:35:22,108 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:35:28] 2025-06-04 22:35:22,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139750098020160)>', '<ExcThread(monitor, started 139749444548352)>']
[2025-06-04 18:35:28] 2025-06-04 22:35:23,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:35:28] 2025-06-04 22:35:23,216 | INFO     | [monitor] control thread has ended
[2025-06-04 18:35:28] 2025-06-04 22:35:27,540 | INFO     | all workflow threads have been joined
[2025-06-04 18:35:28] 2025-06-04 22:35:27,540 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:35:28] 2025-06-04 22:35:27,541 | INFO     | traces error code: 0
[2025-06-04 18:35:28] 2025-06-04 22:35:27,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:35:28] 2025-06-04 22:35:27,679 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:35:28] 2025-06-04 22:35:27,698 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:35:28] 2025-06-04 22:35:27,701 [wrapper] pilotpid: 5795
[2025-06-04 18:35:28] 2025-06-04 22:35:27,703 [wrapper] Pilot exit status: 0
[2025-06-04 18:35:28] 2025-06-04 22:35:27,742 [wrapper] pandaids: 6677862440
[2025-06-04 18:35:28] 2025-06-04 22:35:27,798 [wrapper] cleanup supervisor_pilot 241869 5796
[2025-06-04 18:35:28] 2025-06-04 22:35:27,801 [wrapper] Test setup, not cleaning
[2025-06-04 18:35:28] 2025-06-04 22:35:27,805 [wrapper] apfmon messages muted
[2025-06-04 18:35:28] 2025-06-04 22:35:27,808 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:35:28] 2025-06-04 22:35:27,811 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:35:28]  *** Error codes and diagnostics ***
[2025-06-04 18:35:28]     "exeErrorCode": 0,
[2025-06-04 18:35:28]     "exeErrorDiag": "",
[2025-06-04 18:35:28]     "pilotErrorCode": 0,
[2025-06-04 18:35:28]     "pilotErrorDiag": "",
[2025-06-04 18:35:28]  *** Listing of results directory ***
[2025-06-04 18:35:28] total 385488
[2025-06-04 18:35:28] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 12:58 pilot3.tar.gz
[2025-06-04 18:35:28] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 13:20 queuedata.json
[2025-06-04 18:35:28] -rwx------ 1 boincer umatlas     37140 Jun  3 13:21 runpilot2-wrapper.sh
[2025-06-04 18:35:28] -rw-r--r-- 1 boincer umatlas       100 Jun  4 17:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:35:28] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 17:02 run_atlas
[2025-06-04 18:35:28] -rw-r--r-- 1 boincer umatlas       105 Jun  4 17:02 job.xml
[2025-06-04 18:35:28] -rw-r--r-- 2 boincer umatlas 212923911 Jun  4 17:02 EVNT.45006593._001620.pool.root.1
[2025-06-04 18:35:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 17:02 start_atlas.sh
[2025-06-04 18:35:28] drwxrwx--x 2 boincer umatlas      4096 Jun  4 17:02 shared
[2025-06-04 18:35:28] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 17:02 input.tar.gz
[2025-06-04 18:35:28] -rw-r--r-- 1 boincer umatlas         0 Jun  4 17:02 boinc_lockfile
[2025-06-04 18:35:28] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 17:02 pandaJob.out
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas    987032 Jun  4 17:02 agis_schedconf.cvmfs.json
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas   1598969 Jun  4 17:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:35:28] drwx------ 4 boincer umatlas      4096 Jun  4 17:02 pilot3
[2025-06-04 18:35:28] -rw-r--r-- 1 boincer umatlas      6269 Jun  4 18:29 init_data.xml
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas        95 Jun  4 18:34 pilot_heartbeat.json
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas 176189768 Jun  4 18:34 HITS.45006595._040430.pool.root.1
[2025-06-04 18:35:28] -rw-r--r-- 1 boincer umatlas       529 Jun  4 18:34 boinc_task_state.xml
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas      1057 Jun  4 18:34 memory_monitor_summary.json
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas    329614 Jun  4 18:35 log.45006595._040430.job.log.tgz.1
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas      7748 Jun  4 18:35 heartbeat.json
[2025-06-04 18:35:28] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 18:35 boinc_mmap_file
[2025-06-04 18:35:28] -rw-r--r-- 1 boincer umatlas        27 Jun  4 18:35 wrapper_checkpoint.txt
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas      4817 Jun  4 18:35 pilotlog.txt
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas    566202 Jun  4 18:35 log.45006595._040430.job.log.1
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas       357 Jun  4 18:35 output.list
[2025-06-04 18:35:28] -rw-r--r-- 1 boincer umatlas       620 Jun  4 18:35 runtime_log
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas    911360 Jun  4 18:35 result.tar.gz
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas       659 Jun  4 18:35 WJvKDmOVkg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmOQZKDm2B4qOm.diag
[2025-06-04 18:35:28] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 18:35 runtime_log.err
[2025-06-04 18:35:28] -rw-r--r-- 1 boincer umatlas     21322 Jun  4 18:35 stderr.txt
[2025-06-04 18:35:28] HITS file was successfully produced:
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas 176189768 Jun  4 18:34 shared/HITS.pool.root.1
[2025-06-04 18:35:28]  *** Contents of shared directory: ***
[2025-06-04 18:35:28] total 381416
[2025-06-04 18:35:28] -rw-r--r-- 2 boincer umatlas 212923911 Jun  4 17:02 ATLAS.root_0
[2025-06-04 18:35:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 17:02 start_atlas.sh
[2025-06-04 18:35:28] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 17:02 input.tar.gz
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas 176189768 Jun  4 18:34 HITS.pool.root.1
[2025-06-04 18:35:28] -rw------- 1 boincer umatlas    911360 Jun  4 18:35 result.tar.gz
18:35:29 (285314): run_atlas exited; CPU time 34186.728915
18:35:29 (285314): called boinc_finish(0)

</stderr_txt>
]]>

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