Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:02:17 (16508): wrapper (7.7.26015): starting
17:02:17 (16508): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 17:02:17] Arguments: --nthreads 8
[2025-06-04 17:02:17] Threads: 8
[2025-06-04 17:02:17] Checking for CVMFS
[2025-06-04 17:02:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:02:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:02:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:02:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:02:18] 2.11.2.0 2791 7355 74808 146793 3 1 13170367 20275200 1 130560 0 2519556 99.986 1109884 45586 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 17:02:18] CVMFS is ok
[2025-06-04 17:02:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:02:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:02:18] Further information can be found at the LHC@home message board.
[2025-06-04 17:02:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:02:18] Checking for apptainer binary...
[2025-06-04 17:02:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:02:18] Running /usr/bin/apptainer --version
[2025-06-04 17:02:18] apptainer version 1.3.2-1.el7
[2025-06-04 17:02:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:02:20] c-204-3.aglt2.org
[2025-06-04 17:02:20] apptainer works
[2025-06-04 17:02:20] Set ATHENA_PROC_NUMBER=8
[2025-06-04 17:02:20] Set ATHENA_CORE_NUMBER=8
[2025-06-04 17:02:20] Starting ATLAS job with PandaID=6677786676
[2025-06-04 17:02:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:49:50]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:49:50] 2025-06-04 22:49:36,417 | INFO     | sum of deviations: 748184642.0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,417 | INFO     | mean x: 1749074469.0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,417 | INFO     | mean y: 2516491.568421053
[2025-06-04 18:49:50] 2025-06-04 22:49:36,417 | INFO     | -- intersect: -4920326376.518525
[2025-06-04 18:49:50] 2025-06-04 22:49:36,418 | INFO     | intersect: -4920326376.518525
[2025-06-04 18:49:50] 2025-06-04 22:49:36,418 | INFO     | chi2: 0.012054493566335273
[2025-06-04 18:49:50] 2025-06-04 22:49:36,418 | INFO     | current chi2=0.012054493566335273 (change=70.5761291083169 %)
[2025-06-04 18:49:50] 2025-06-04 22:49:36,418 | INFO     | sum of square deviations: 226022842.5
[2025-06-04 18:49:50] 2025-06-04 22:49:36,419 | INFO     | sum of deviations: 1002531858.5
[2025-06-04 18:49:50] 2025-06-04 22:49:36,419 | INFO     | mean x: 1749074621.5
[2025-06-04 18:49:50] 2025-06-04 22:49:36,419 | INFO     | mean y: 2515644.7
[2025-06-04 18:49:50] 2025-06-04 22:49:36,419 | INFO     | -- intersect: -7755563191.723708
[2025-06-04 18:49:50] 2025-06-04 22:49:36,419 | INFO     | intersect: -7755563191.723708
[2025-06-04 18:49:50] 2025-06-04 22:49:36,419 | INFO     | chi2: 0.0009597301870180153
[2025-06-04 18:49:50] 2025-06-04 22:49:36,420 | INFO     | current chi2=0.0009597301870180153 (change=92.03840309228532 %)
[2025-06-04 18:49:50] 2025-06-04 22:49:36,420 | INFO     | sum of square deviations: 190403570.0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,420 | INFO     | sum of deviations: 587793255.0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,420 | INFO     | mean x: 1749074774.0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,420 | INFO     | mean y: 2517420.694117647
[2025-06-04 18:49:50] 2025-06-04 22:49:36,421 | INFO     | -- intersect: -5397036561.659518
[2025-06-04 18:49:50] 2025-06-04 22:49:36,421 | INFO     | intersect: -5397036561.659518
[2025-06-04 18:49:50] 2025-06-04 22:49:36,421 | INFO     | chi2: 0.0006091313769795489
[2025-06-04 18:49:50] 2025-06-04 22:49:36,421 | INFO     | current chi2=0.0006091313769795489 (change=36.53097659956019 %)
[2025-06-04 18:49:50] 2025-06-04 22:49:36,421 | INFO     | sum of square deviations: 158737860.0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,422 | INFO     | sum of deviations: 222850415.50000003
[2025-06-04 18:49:50] 2025-06-04 22:49:36,422 | INFO     | mean x: 1749074926.5
[2025-06-04 18:49:50] 2025-06-04 22:49:36,422 | INFO     | mean y: 2519174.9875
[2025-06-04 18:49:50] 2025-06-04 22:49:36,422 | INFO     | -- intersect: -2452988755.579014
[2025-06-04 18:49:50] 2025-06-04 22:49:36,422 | INFO     | intersect: -2452988755.579014
[2025-06-04 18:49:50] 2025-06-04 22:49:36,422 | INFO     | chi2: 0.00017776664555156323
[2025-06-04 18:49:50] 2025-06-04 22:49:36,423 | INFO     | current chi2=0.00017776664555156323 (change=70.81637028237807 %)
[2025-06-04 18:49:50] 2025-06-04 22:49:36,423 | INFO     | sum of square deviations: 130793150.0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,423 | INFO     | sum of deviations: 73740582.00000001
[2025-06-04 18:49:50] 2025-06-04 22:49:36,423 | INFO     | mean x: 1749075079.0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,424 | INFO     | mean y: 2519982.2133333334
[2025-06-04 18:49:50] 2025-06-04 22:49:36,424 | INFO     | -- intersect: -983600577.5190073
[2025-06-04 18:49:50] 2025-06-04 22:49:36,424 | INFO     | intersect: -983600577.5190073
[2025-06-04 18:49:50] 2025-06-04 22:49:36,424 | INFO     | chi2: 8.412939604079085e-05
[2025-06-04 18:49:50] 2025-06-04 22:49:36,424 | INFO     | current chi2=8.412939604079085e-05 (change=52.674251246762616 %)
[2025-06-04 18:49:50] 2025-06-04 22:49:36,424 | INFO     | sum of square deviations: 106336877.5
[2025-06-04 18:49:50] 2025-06-04 22:49:36,425 | INFO     | sum of deviations: -9734929.000000004
[2025-06-04 18:49:50] 2025-06-04 22:49:36,425 | INFO     | mean x: 1749075231.5
[2025-06-04 18:49:50] 2025-06-04 22:49:36,425 | INFO     | mean y: 2520495.057142857
[2025-06-04 18:49:50] 2025-06-04 22:49:36,425 | INFO     | -- intersect: 162644843.21012554
[2025-06-04 18:49:50] 2025-06-04 22:49:36,425 | INFO     | intersect: 162644843.21012554
[2025-06-04 18:49:50] 2025-06-04 22:49:36,425 | INFO     | chi2: 3.5764301421907574e-05
[2025-06-04 18:49:50] 2025-06-04 22:49:36,426 | INFO     | current chi2=3.5764301421907574e-05 (change=57.48893596648792 %)
[2025-06-04 18:49:50] 2025-06-04 22:49:36,426 | INFO     | left removable region not found
[2025-06-04 18:49:50] 2025-06-04 22:49:36,426 | INFO     | sum of square deviations: 300842850.0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,426 | INFO     | sum of deviations: 12951570569.0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,427 | INFO     | mean x: 1749073981.0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,427 | INFO     | mean y: 2474997.0606060605
[2025-06-04 18:49:50] 2025-06-04 22:49:36,427 | INFO     | -- intersect: -75296821945.92229
[2025-06-04 18:49:50] 2025-06-04 22:49:36,427 | INFO     | intersect: -75296821945.92229
[2025-06-04 18:49:50] 2025-06-04 22:49:36,427 | INFO     | chi2: 1.5005592766083908
[2025-06-04 18:49:50] 2025-06-04 22:49:36,427 | INFO     | -- intersect: -75296821945.92229
[2025-06-04 18:49:50] 2025-06-04 22:49:36,427 | INFO     | current memory leak: 43.05 B/s (using 99 data points, chi2=1.50)
[2025-06-04 18:49:50] 2025-06-04 22:49:36,428 | INFO     | ..............................
[2025-06-04 18:49:50] 2025-06-04 22:49:36,428 | INFO     | . Timing measurements:
[2025-06-04 18:49:50] 2025-06-04 22:49:36,428 | INFO     | . get job = 0 s
[2025-06-04 18:49:50] 2025-06-04 22:49:36,428 | INFO     | . initial setup = 3 s
[2025-06-04 18:49:50] 2025-06-04 22:49:36,428 | INFO     | . payload setup = 11 s
[2025-06-04 18:49:50] 2025-06-04 22:49:36,428 | INFO     | . stage-in = 0 s
[2025-06-04 18:49:50] 2025-06-04 22:49:36,429 | INFO     | . payload execution = 6377 s
[2025-06-04 18:49:50] 2025-06-04 22:49:36,429 | INFO     | . stage-out = 0 s
[2025-06-04 18:49:50] 2025-06-04 22:49:36,429 | INFO     | . log creation = 0 s
[2025-06-04 18:49:50] 2025-06-04 22:49:36,429 | INFO     | ..............................
[2025-06-04 18:49:50] 2025-06-04 22:49:36,522 | INFO     | 
[2025-06-04 18:49:50] 2025-06-04 22:49:36,522 | INFO     | job summary report
[2025-06-04 18:49:50] 2025-06-04 22:49:36,523 | INFO     | --------------------------------------------------
[2025-06-04 18:49:50] 2025-06-04 22:49:36,523 | INFO     | PanDA job id: 6677786676
[2025-06-04 18:49:50] 2025-06-04 22:49:36,523 | INFO     | task id: 45006595
[2025-06-04 18:49:50] 2025-06-04 22:49:36,523 | INFO     | errors: (none)
[2025-06-04 18:49:50] 2025-06-04 22:49:36,523 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:49:50] 2025-06-04 22:49:36,524 | INFO     | pilot state: finished 
[2025-06-04 18:49:50] 2025-06-04 22:49:36,524 | INFO     | transexitcode: 0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,524 | INFO     | exeerrorcode: 0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,524 | INFO     | exeerrordiag: 
[2025-06-04 18:49:50] 2025-06-04 22:49:36,524 | INFO     | exitcode: 0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,524 | INFO     | exitmsg: OK
[2025-06-04 18:49:50] 2025-06-04 22:49:36,525 | INFO     | cpuconsumptiontime: 47327 s
[2025-06-04 18:49:50] 2025-06-04 22:49:36,525 | INFO     | nevents: 400
[2025-06-04 18:49:50] 2025-06-04 22:49:36,525 | INFO     | neventsw: 0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,525 | INFO     | pid: 27619
[2025-06-04 18:49:50] 2025-06-04 22:49:36,525 | INFO     | pgrp: 27619
[2025-06-04 18:49:50] 2025-06-04 22:49:36,525 | INFO     | corecount: 8
[2025-06-04 18:49:50] 2025-06-04 22:49:36,525 | INFO     | event service: False
[2025-06-04 18:49:50] 2025-06-04 22:49:36,526 | INFO     | sizes: {0: 2397171, 1: 2397370, 6: 2397576, 11: 2397604, 6393: 2424484, 6395: 2433609, 6402: 2433723}
[2025-06-04 18:49:50] 2025-06-04 22:49:36,526 | INFO     | --------------------------------------------------
[2025-06-04 18:49:50] 2025-06-04 22:49:36,526 | INFO     | 
[2025-06-04 18:49:50] 2025-06-04 22:49:36,526 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 18:49:50] 2025-06-04 22:49:36,552 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,553 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,553 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,553 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,553 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,553 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,554 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,554 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,554 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,554 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:49:50] 2025-06-04 22:49:36,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,557 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:49:50] 2025-06-04 22:49:36,557 | INFO     | job 6677786676 has completed (purged errors)
[2025-06-04 18:49:50] 2025-06-04 22:49:36,557 | INFO     | overall cleanup function is called
[2025-06-04 18:49:50] 2025-06-04 22:49:37,565 | INFO     | --- collectZombieJob: --- 10, [27619]
[2025-06-04 18:49:50] 2025-06-04 22:49:37,565 | INFO     | zombie collector waiting for pid 27619
[2025-06-04 18:49:50] 2025-06-04 22:49:37,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:49:50] 2025-06-04 22:49:37,566 | INFO     | collected zombie processes
[2025-06-04 18:49:50] 2025-06-04 22:49:37,566 | INFO     | will attempt to kill all subprocesses of pid=27619
[2025-06-04 18:49:50] 2025-06-04 22:49:37,659 | INFO     | process IDs to be killed: [27619] (in reverse order)
[2025-06-04 18:49:50] 2025-06-04 22:49:37,712 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:49:50] 2025-06-04 22:49:37,713 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:49:50] 2025-06-04 22:49:37,717 | INFO     | did not find any defunct processes belonging to 27619
[2025-06-04 18:49:50] 2025-06-04 22:49:37,720 | INFO     | did not find any defunct processes belonging to 27619
[2025-06-04 18:49:50] 2025-06-04 22:49:37,720 | INFO     | ready for new job
[2025-06-04 18:49:50] 2025-06-04 22:49:37,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:49:50] 2025-06-04 22:49:37,722 | INFO     | **************************************
[2025-06-04 18:49:50] 2025-06-04 22:49:37,722 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:49:50] 2025-06-04 22:49:37,722 | INFO     | **************************************
[2025-06-04 18:49:50] 2025-06-04 22:49:37,722 | INFO     | 
[2025-06-04 18:49:50] 2025-06-04 22:49:37,723 | INFO     | architecture information:
[2025-06-04 18:49:50] 2025-06-04 22:49:37,724 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:49:50] 2025-06-04 22:49:37,740 | INFO     | cat /etc/os-release:
[2025-06-04 18:49:50] NAME="CentOS Linux"
[2025-06-04 18:49:50] VERSION="7 (Core)"
[2025-06-04 18:49:50] ID="centos"
[2025-06-04 18:49:50] ID_LIKE="rhel fedora"
[2025-06-04 18:49:50] VERSION_ID="7"
[2025-06-04 18:49:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:49:50] ANSI_COLOR="0;31"
[2025-06-04 18:49:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:49:50] HOME_URL="https://www.centos.org/"
[2025-06-04 18:49:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:49:50] 
[2025-06-04 18:49:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:49:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:49:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:49:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:49:50] 
[2025-06-04 18:49:50] 2025-06-04 22:49:37,741 | INFO     | **************************************
[2025-06-04 18:49:50] 2025-06-04 22:49:38,244 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 18:49:50] 2025-06-04 22:49:38,262 | INFO     | sufficient remaining disk space (18649972736 B)
[2025-06-04 18:49:50] 2025-06-04 22:49:38,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:49:50] 2025-06-04 22:49:38,263 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:49:50] 2025-06-04 22:49:38,263 | INFO     | update_server=False
[2025-06-04 18:49:50] 2025-06-04 22:49:38,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:49:50] 2025-06-04 22:49:38,264 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:49:50] 2025-06-04 22:49:38,264 | INFO     | aborting loop
[2025-06-04 18:49:50] 2025-06-04 22:49:38,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:49:50] 2025-06-04 22:49:38,265 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 18:49:50] 2025-06-04 22:49:38,265 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:49:50] 2025-06-04 22:49:38,266 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:49:50] 2025-06-04 22:49:38,266 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:49:50] 2025-06-04 22:49:38,267 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:49:50] 2025-06-04 22:49:38,597 | INFO     | all payload control threads have been joined
[2025-06-04 18:49:50] 2025-06-04 22:49:38,869 | INFO     | all data control threads have been joined
[2025-06-04 18:49:50] 2025-06-04 22:49:39,269 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:39,270 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:39,272 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:39,419 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:39,485 | INFO     | all job control threads have been joined
[2025-06-04 18:49:50] 2025-06-04 22:49:39,603 | INFO     | [payload] control thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:39,611 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:39,657 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:39,875 | INFO     | [data] control thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:40,019 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:40,271 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:40,354 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:40,485 | INFO     | [job] control thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:40,550 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:40,634 | INFO     | [job] validate thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:40,635 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:40,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:49:50] 2025-06-04 22:49:44,741 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:49:50] 2025-06-04 22:49:45,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080119293760)>', '<ExcThread(monitor, started 140079511086848)>']
[2025-06-04 18:49:50] 2025-06-04 22:49:45,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:49:50] 2025-06-04 22:49:45,297 | INFO     | [monitor] control thread has ended
[2025-06-04 18:49:50] 2025-06-04 22:49:50,194 | INFO     | all workflow threads have been joined
[2025-06-04 18:49:50] 2025-06-04 22:49:50,201 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:49:50] 2025-06-04 22:49:50,204 | INFO     | traces error code: 0
[2025-06-04 18:49:50] 2025-06-04 22:49:50,205 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:49:50] 2025-06-04 22:49:50,331 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:49:50] 2025-06-04 22:49:50,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:49:50] 2025-06-04 22:49:50,341 [wrapper] pilotpid: 20458
[2025-06-04 18:49:50] 2025-06-04 22:49:50,345 [wrapper] Pilot exit status: 0
[2025-06-04 18:49:50] 2025-06-04 22:49:50,364 [wrapper] pandaids: 6677786676
[2025-06-04 18:49:50] 2025-06-04 22:49:50,408 [wrapper] cleanup supervisor_pilot  3201 20459
[2025-06-04 18:49:50] 2025-06-04 22:49:50,412 [wrapper] Test setup, not cleaning
[2025-06-04 18:49:50] 2025-06-04 22:49:50,417 [wrapper] apfmon messages muted
[2025-06-04 18:49:50] 2025-06-04 22:49:50,422 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:49:50] 2025-06-04 22:49:50,426 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:49:50]  *** Error codes and diagnostics ***
[2025-06-04 18:49:50]     "exeErrorCode": 0,
[2025-06-04 18:49:50]     "exeErrorDiag": "",
[2025-06-04 18:49:50]     "pilotErrorCode": 0,
[2025-06-04 18:49:50]     "pilotErrorDiag": "",
[2025-06-04 18:49:50]  *** Listing of results directory ***
[2025-06-04 18:49:50] total 384252
[2025-06-04 18:49:50] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 12:58 pilot3.tar.gz
[2025-06-04 18:49:50] -rwx------ 1 boincer umatlas     37140 Jun  3 13:12 runpilot2-wrapper.sh
[2025-06-04 18:49:50] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 13:12 queuedata.json
[2025-06-04 18:49:50] -rw-r--r-- 1 boincer umatlas       100 Jun  4 17:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:49:50] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 17:02 run_atlas
[2025-06-04 18:49:50] -rw-r--r-- 1 boincer umatlas       105 Jun  4 17:02 job.xml
[2025-06-04 18:49:50] -rw-r--r-- 2 boincer umatlas 215599809 Jun  4 17:02 EVNT.45006593._001604.pool.root.1
[2025-06-04 18:49:50] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 17:02 start_atlas.sh
[2025-06-04 18:49:50] drwxrwx--x 2 boincer umatlas      4096 Jun  4 17:02 shared
[2025-06-04 18:49:50] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 17:02 input.tar.gz
[2025-06-04 18:49:50] -rw-r--r-- 1 boincer umatlas         0 Jun  4 17:02 boinc_lockfile
[2025-06-04 18:49:50] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 17:02 pandaJob.out
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas    987032 Jun  4 17:02 agis_schedconf.cvmfs.json
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas   1598969 Jun  4 17:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:49:50] drwx------ 4 boincer umatlas      4096 Jun  4 17:02 pilot3
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas 172222159 Jun  4 18:48 HITS.45006595._039993.pool.root.1
[2025-06-04 18:49:50] -rw-r--r-- 1 boincer umatlas       530 Jun  4 18:48 boinc_task_state.xml
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas        95 Jun  4 18:49 pilot_heartbeat.json
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas      1048 Jun  4 18:49 memory_monitor_summary.json
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas    315035 Jun  4 18:49 log.45006595._039993.job.log.tgz.1
[2025-06-04 18:49:50] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 18:49 init_data.xml
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas      7743 Jun  4 18:49 heartbeat.json
[2025-06-04 18:49:50] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 18:49 boinc_mmap_file
[2025-06-04 18:49:50] -rw-r--r-- 1 boincer umatlas        27 Jun  4 18:49 wrapper_checkpoint.txt
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas      4476 Jun  4 18:49 pilotlog.txt
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas    594100 Jun  4 18:49 log.45006595._039993.job.log.1
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas       357 Jun  4 18:49 output.list
[2025-06-04 18:49:50] -rw-r--r-- 1 boincer umatlas       620 Jun  4 18:49 runtime_log
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas    931840 Jun  4 18:49 result.tar.gz
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas       659 Jun  4 18:49 sdDODmGNkg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmiOZKDmrzx3Fo.diag
[2025-06-04 18:49:50] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 18:49 runtime_log.err
[2025-06-04 18:49:50] -rw-r--r-- 1 boincer umatlas     20748 Jun  4 18:49 stderr.txt
[2025-06-04 18:49:50] HITS file was successfully produced:
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas 172222159 Jun  4 18:48 shared/HITS.pool.root.1
[2025-06-04 18:49:50]  *** Contents of shared directory: ***
[2025-06-04 18:49:50] total 380168
[2025-06-04 18:49:50] -rw-r--r-- 2 boincer umatlas 215599809 Jun  4 17:02 ATLAS.root_0
[2025-06-04 18:49:50] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 17:02 start_atlas.sh
[2025-06-04 18:49:50] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 17:02 input.tar.gz
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas 172222159 Jun  4 18:48 HITS.pool.root.1
[2025-06-04 18:49:50] -rw------- 1 boincer umatlas    931840 Jun  4 18:49 result.tar.gz
18:49:51 (16508): run_atlas exited; CPU time 47288.881410
18:49:51 (16508): called boinc_finish(0)

</stderr_txt>
]]>

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