Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:27:17 (222536): wrapper (7.7.26015): starting
18:27:17 (222536): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 18:27:17] Arguments: --nthreads 9
[2025-06-04 18:27:17] Threads: 9
[2025-06-04 18:27:17] Checking for CVMFS
[2025-06-04 18:27:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:27:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:27:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:27:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:27:19] 2.11.2.0 5225 29382 237924 146797 1 393 12473574 18432000 9303 130560 0 59386158 99.426 70789085 29500 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 18:27:19] CVMFS is ok
[2025-06-04 18:27:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:27:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:27:19] Further information can be found at the LHC@home message board.
[2025-06-04 18:27:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:27:19] Checking for apptainer binary...
[2025-06-04 18:27:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:27:19] Running /usr/bin/apptainer --version
[2025-06-04 18:27:19] apptainer version 1.3.2-1.el7
[2025-06-04 18:27:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:27:21] c-210-33-2.aglt2.org
[2025-06-04 18:27:21] apptainer works
[2025-06-04 18:27:21] Set ATHENA_PROC_NUMBER=9
[2025-06-04 18:27:21] Set ATHENA_CORE_NUMBER=9
[2025-06-04 18:27:21] Starting ATLAS job with PandaID=6677784749
[2025-06-04 18:27:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:49:47]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:49:47]  filesize=329326
[2025-06-04 19:49:47]  filetype=log
[2025-06-04 19:49:47]  guid=12e0d16d-2dc8-4611-b5d4-c4fb12821a15
[2025-06-04 19:49:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 19:49:47]  is_altstaged=None
[2025-06-04 19:49:47]  is_tar=False
[2025-06-04 19:49:47]  lfn=log.45006595._039353.job.log.tgz.1
[2025-06-04 19:49:47]  mtime=0
[2025-06-04 19:49:47]  protocol_id=None
[2025-06-04 19:49:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 19:49:47]  replicas=None
[2025-06-04 19:49:47]  scope=mc23_13p6TeV
[2025-06-04 19:49:47]  status=None
[2025-06-04 19:49:47]  status_code=0
[2025-06-04 19:49:47]  storage_token=
[2025-06-04 19:49:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677784749/log.45006595._039353.job.log.tgz.1
[2025-06-04 19:49:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/3b/log.45006595._039353.job.log.tgz.1
[2025-06-04 19:49:47]  workdir=None
[2025-06-04 19:49:47] ]
[2025-06-04 19:49:47] 2025-06-04 23:49:28,300 | INFO     | transferring file log.45006595._039353.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677784749/log.45006595._039353.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 19:49:47] 2025-06-04 23:49:28,300 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677784749/log.45006595._039353.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._039353.job
[2025-06-04 19:49:47] 2025-06-04 23:49:28,322 | INFO     | adding to output.list: log.45006595._039353.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/3b/log.45006595._039353.job.log.tg
[2025-06-04 19:49:47] 2025-06-04 23:49:28,323 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 19:49:47] 2025-06-04 23:49:28,323 | INFO     | summary of transferred files:
[2025-06-04 19:49:47] 2025-06-04 23:49:28,323 | INFO     |  -- lfn=log.45006595._039353.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 19:49:47] 2025-06-04 23:49:28,323 | INFO     | stage-out finished correctly
[2025-06-04 19:49:47] 2025-06-04 23:49:28,587 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 19:49:47] 2025-06-04 23:49:29,175 | INFO     | job 6677784749 has state=finished
[2025-06-04 19:49:47] 2025-06-04 23:49:29,176 | INFO     | preparing for final server update for job 6677784749 in state='finished'
[2025-06-04 19:49:47] 2025-06-04 23:49:29,176 | INFO     | this job has now completed (state=finished)
[2025-06-04 19:49:47] 2025-06-04 23:49:29,176 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 19:49:47] 2025-06-04 23:49:29,176 | INFO     | log transfer has been attempted: DONE
[2025-06-04 19:49:47] 2025-06-04 23:49:29,176 | INFO     | job 6677784749 has finished - writing final server update
[2025-06-04 19:49:47] 2025-06-04 23:49:29,176 | INFO     | total number of processed events: 400 (read)
[2025-06-04 19:49:47] 2025-06-04 23:49:29,179 | INFO     | executing command: lscpu
[2025-06-04 19:49:47] 2025-06-04 23:49:29,221 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 19:49:47] 2025-06-04 23:49:30,488 | INFO     | monitor loop #382: job 0:6677784749 is in state 'finished'
[2025-06-04 19:49:47] 2025-06-04 23:49:30,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:49:47] 2025-06-04 23:49:32,993 | INFO     | monitor loop #383: job 0:6677784749 is in state 'finished'
[2025-06-04 19:49:47] 2025-06-04 23:49:32,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:49:47] 2025-06-04 23:49:33,634 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 19:49:47] 2025-06-04 23:49:33,634 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677784749/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:49:47] 2025-06-04 23:49:33,635 | INFO     | extracted standard info from prmon json
[2025-06-04 19:49:47] 2025-06-04 23:49:33,635 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:49:47] 2025-06-04 23:49:33,635 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:49:47] 2025-06-04 23:49:33,636 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:49:47] 2025-06-04 23:49:33,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:49:47] 2025-06-04 23:49:33,639 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:49:47] 2025-06-04 23:49:33,639 | INFO     | sum of square deviations: 115715719.9861112
[2025-06-04 19:49:47] 2025-06-04 23:49:33,640 | INFO     | sum of deviations: -9152447486.250002
[2025-06-04 19:49:47] 2025-06-04 23:49:33,640 | INFO     | mean x: 1749078672.5138888
[2025-06-04 19:49:47] 2025-06-04 23:49:33,640 | INFO     | mean y: 2693248.25
[2025-06-04 19:49:47] 2025-06-04 23:49:33,640 | INFO     | -- intersect: 138344749983.7103
[2025-06-04 19:49:47] 2025-06-04 23:49:33,640 | INFO     | intersect: 138344749983.7103
[2025-06-04 19:49:47] 2025-06-04 23:49:33,641 | INFO     | chi2: 0.09565158597171913
[2025-06-04 19:49:47] 2025-06-04 23:49:33,641 | INFO     | -- intersect: 138344749983.7103
[2025-06-04 19:49:47] 2025-06-04 23:49:33,641 | INFO     | current memory leak: -79.09 B/s (using 72 data points, chi2=0.10)
[2025-06-04 19:49:47] 2025-06-04 23:49:33,642 | INFO     | ..............................
[2025-06-04 19:49:47] 2025-06-04 23:49:33,642 | INFO     | . Timing measurements:
[2025-06-04 19:49:47] 2025-06-04 23:49:33,642 | INFO     | . get job = 0 s
[2025-06-04 19:49:47] 2025-06-04 23:49:33,642 | INFO     | . initial setup = 2 s
[2025-06-04 19:49:47] 2025-06-04 23:49:33,642 | INFO     | . payload setup = 42 s
[2025-06-04 19:49:47] 2025-06-04 23:49:33,642 | INFO     | . stage-in = 0 s
[2025-06-04 19:49:47] 2025-06-04 23:49:33,642 | INFO     | . payload execution = 4800 s
[2025-06-04 19:49:47] 2025-06-04 23:49:33,642 | INFO     | . stage-out = 0 s
[2025-06-04 19:49:47] 2025-06-04 23:49:33,642 | INFO     | . log creation = 0 s
[2025-06-04 19:49:47] 2025-06-04 23:49:33,642 | INFO     | ..............................
[2025-06-04 19:49:47] 2025-06-04 23:49:33,759 | INFO     | 
[2025-06-04 19:49:47] 2025-06-04 23:49:33,759 | INFO     | job summary report
[2025-06-04 19:49:47] 2025-06-04 23:49:33,760 | INFO     | --------------------------------------------------
[2025-06-04 19:49:47] 2025-06-04 23:49:33,760 | INFO     | PanDA job id: 6677784749
[2025-06-04 19:49:47] 2025-06-04 23:49:33,760 | INFO     | task id: 45006595
[2025-06-04 19:49:47] 2025-06-04 23:49:33,760 | INFO     | errors: (none)
[2025-06-04 19:49:47] 2025-06-04 23:49:33,760 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:49:47] 2025-06-04 23:49:33,760 | INFO     | pilot state: finished 
[2025-06-04 19:49:47] 2025-06-04 23:49:33,760 | INFO     | transexitcode: 0
[2025-06-04 19:49:47] 2025-06-04 23:49:33,760 | INFO     | exeerrorcode: 0
[2025-06-04 19:49:47] 2025-06-04 23:49:33,760 | INFO     | exeerrordiag: 
[2025-06-04 19:49:47] 2025-06-04 23:49:33,760 | INFO     | exitcode: 0
[2025-06-04 19:49:47] 2025-06-04 23:49:33,761 | INFO     | exitmsg: OK
[2025-06-04 19:49:47] 2025-06-04 23:49:33,761 | INFO     | cpuconsumptiontime: 33805 s
[2025-06-04 19:49:47] 2025-06-04 23:49:33,761 | INFO     | nevents: 400
[2025-06-04 19:49:47] 2025-06-04 23:49:33,761 | INFO     | neventsw: 0
[2025-06-04 19:49:47] 2025-06-04 23:49:33,761 | INFO     | pid: 233343
[2025-06-04 19:49:47] 2025-06-04 23:49:33,761 | INFO     | pgrp: 233343
[2025-06-04 19:49:47] 2025-06-04 23:49:33,761 | INFO     | corecount: 9
[2025-06-04 19:49:47] 2025-06-04 23:49:33,761 | INFO     | event service: False
[2025-06-04 19:49:47] 2025-06-04 23:49:33,761 | INFO     | sizes: {0: 2397342, 11: 2397342, 19: 2397576, 22: 2397604, 4847: 2423686, 4848: 2432627, 4849: 2432811, 4854: 2432981}
[2025-06-04 19:49:47] 2025-06-04 23:49:33,761 | INFO     | --------------------------------------------------
[2025-06-04 19:49:47] 2025-06-04 23:49:33,761 | INFO     | 
[2025-06-04 19:49:47] 2025-06-04 23:49:33,761 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 19:49:47] 2025-06-04 23:49:33,785 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,785 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,785 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,785 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,785 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:49:47] 2025-06-04 23:49:33,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:49:47] 2025-06-04 23:49:33,787 | INFO     | job 6677784749 has completed (purged errors)
[2025-06-04 19:49:47] 2025-06-04 23:49:33,787 | INFO     | overall cleanup function is called
[2025-06-04 19:49:47] 2025-06-04 23:49:34,796 | INFO     | --- collectZombieJob: --- 10, [233343]
[2025-06-04 19:49:47] 2025-06-04 23:49:34,796 | INFO     | zombie collector waiting for pid 233343
[2025-06-04 19:49:47] 2025-06-04 23:49:34,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:49:47] 2025-06-04 23:49:34,796 | INFO     | collected zombie processes
[2025-06-04 19:49:47] 2025-06-04 23:49:34,796 | INFO     | will attempt to kill all subprocesses of pid=233343
[2025-06-04 19:49:47] 2025-06-04 23:49:35,028 | INFO     | process IDs to be killed: [233343] (in reverse order)
[2025-06-04 19:49:47] 2025-06-04 23:49:35,113 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:49:47] 2025-06-04 23:49:35,114 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:49:47] 2025-06-04 23:49:35,121 | INFO     | did not find any defunct processes belonging to 233343
[2025-06-04 19:49:47] 2025-06-04 23:49:35,128 | INFO     | did not find any defunct processes belonging to 233343
[2025-06-04 19:49:47] 2025-06-04 23:49:35,129 | INFO     | ready for new job
[2025-06-04 19:49:47] 2025-06-04 23:49:35,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:49:47] 2025-06-04 23:49:35,130 | INFO     | **************************************
[2025-06-04 19:49:47] 2025-06-04 23:49:35,131 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:49:47] 2025-06-04 23:49:35,131 | INFO     | **************************************
[2025-06-04 19:49:47] 2025-06-04 23:49:35,131 | INFO     | 
[2025-06-04 19:49:47] 2025-06-04 23:49:35,134 | INFO     | architecture information:
[2025-06-04 19:49:47] 2025-06-04 23:49:35,135 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:49:47] 2025-06-04 23:49:35,153 | INFO     | cat /etc/os-release:
[2025-06-04 19:49:47] NAME="CentOS Linux"
[2025-06-04 19:49:47] VERSION="7 (Core)"
[2025-06-04 19:49:47] ID="centos"
[2025-06-04 19:49:47] ID_LIKE="rhel fedora"
[2025-06-04 19:49:47] VERSION_ID="7"
[2025-06-04 19:49:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:49:47] ANSI_COLOR="0;31"
[2025-06-04 19:49:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:49:47] HOME_URL="https://www.centos.org/"
[2025-06-04 19:49:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:49:47] 
[2025-06-04 19:49:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:49:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:49:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:49:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:49:47] 
[2025-06-04 19:49:47] 2025-06-04 23:49:35,154 | INFO     | **************************************
[2025-06-04 19:49:47] 2025-06-04 23:49:35,656 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 19:49:47] 2025-06-04 23:49:35,675 | INFO     | sufficient remaining disk space (57943261184 B)
[2025-06-04 19:49:47] 2025-06-04 23:49:35,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:49:47] 2025-06-04 23:49:35,676 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:49:47] 2025-06-04 23:49:35,676 | INFO     | update_server=False
[2025-06-04 19:49:47] 2025-06-04 23:49:35,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:49:47] 2025-06-04 23:49:35,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:49:47] 2025-06-04 23:49:35,677 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:49:47] 2025-06-04 23:49:35,677 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:49:47] 2025-06-04 23:49:35,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:49:47] 2025-06-04 23:49:35,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:49:47] 2025-06-04 23:49:35,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:49:47] 2025-06-04 23:49:35,989 | INFO     | all payload control threads have been joined
[2025-06-04 19:49:47] 2025-06-04 23:49:36,047 | INFO     | all data control threads have been joined
[2025-06-04 19:49:47] 2025-06-04 23:49:36,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:49:47] 2025-06-04 23:49:36,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:49:47] 2025-06-04 23:49:36,502 | INFO     | aborting loop
[2025-06-04 19:49:47] 2025-06-04 23:49:36,679 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:36,680 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:36,930 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:36,995 | INFO     | [payload] control thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:37,053 | INFO     | [data] control thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:37,103 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:37,263 | INFO     | [job] validate thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:37,269 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:37,359 | INFO     | all job control threads have been joined
[2025-06-04 19:49:47] 2025-06-04 23:49:37,362 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:37,408 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:37,507 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:37,802 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:38,100 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:38,365 | INFO     | [job] control thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:38,427 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:39,685 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:49:47] 2025-06-04 23:49:41,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819198580544)>', '<ExcThread(monitor, started 139818625394432)>']
[2025-06-04 19:49:47] 2025-06-04 23:49:41,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:49:47] 2025-06-04 23:49:41,706 | INFO     | [monitor] control thread has ended
[2025-06-04 19:49:47] 2025-06-04 23:49:46,594 | INFO     | all workflow threads have been joined
[2025-06-04 19:49:47] 2025-06-04 23:49:46,594 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:49:47] 2025-06-04 23:49:46,595 | INFO     | traces error code: 0
[2025-06-04 19:49:47] 2025-06-04 23:49:46,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:49:47] 2025-06-04 23:49:46,799 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:49:47] 2025-06-04 23:49:46,802 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:49:47] 2025-06-04 23:49:46,805 [wrapper] pilotpid: 226217
[2025-06-04 19:49:47] 2025-06-04 23:49:46,808 [wrapper] Pilot exit status: 0
[2025-06-04 19:49:47] 2025-06-04 23:49:46,821 [wrapper] pandaids: 6677784749
[2025-06-04 19:49:47] 2025-06-04 23:49:46,881 [wrapper] cleanup supervisor_pilot  84800 226218
[2025-06-04 19:49:47] 2025-06-04 23:49:46,884 [wrapper] Test setup, not cleaning
[2025-06-04 19:49:47] 2025-06-04 23:49:46,887 [wrapper] apfmon messages muted
[2025-06-04 19:49:47] 2025-06-04 23:49:46,891 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:49:47] 2025-06-04 23:49:46,894 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:49:47]  *** Error codes and diagnostics ***
[2025-06-04 19:49:47]     "exeErrorCode": 0,
[2025-06-04 19:49:47]     "exeErrorDiag": "",
[2025-06-04 19:49:47]     "pilotErrorCode": 0,
[2025-06-04 19:49:47]     "pilotErrorDiag": "",
[2025-06-04 19:49:47]  *** Listing of results directory ***
[2025-06-04 19:49:47] total 386200
[2025-06-04 19:49:47] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 12:42 pilot3.tar.gz
[2025-06-04 19:49:47] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 12:51 queuedata.json
[2025-06-04 19:49:47] -rwx------ 1 boincer umatlas     37140 Jun  3 12:51 runpilot2-wrapper.sh
[2025-06-04 19:49:47] -rw-r--r-- 1 boincer umatlas       100 Jun  4 18:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:49:47] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 18:27 run_atlas
[2025-06-04 19:49:47] -rw-r--r-- 1 boincer umatlas       105 Jun  4 18:27 job.xml
[2025-06-04 19:49:47] -rw-r--r-- 2 boincer umatlas 213080092 Jun  4 18:27 EVNT.45006593._001578.pool.root.1
[2025-06-04 19:49:47] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 18:27 start_atlas.sh
[2025-06-04 19:49:47] drwxrwx--x 2 boincer umatlas      4096 Jun  4 18:27 shared
[2025-06-04 19:49:47] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 18:27 input.tar.gz
[2025-06-04 19:49:47] -rw-r--r-- 1 boincer umatlas         0 Jun  4 18:27 boinc_lockfile
[2025-06-04 19:49:47] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 18:27 pandaJob.out
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas    987032 Jun  4 18:27 agis_schedconf.cvmfs.json
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas   1598969 Jun  4 18:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:49:47] drwx------ 4 boincer umatlas      4096 Jun  4 18:27 pilot3
[2025-06-04 19:49:47] -rw-r--r-- 1 boincer umatlas      6269 Jun  4 19:36 init_data.xml
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas 176880546 Jun  4 19:48 HITS.45006595._039353.pool.root.1
[2025-06-04 19:49:47] -rw-r--r-- 1 boincer umatlas       529 Jun  4 19:48 boinc_task_state.xml
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas        95 Jun  4 19:49 pilot_heartbeat.json
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas      1055 Jun  4 19:49 memory_monitor_summary.json
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas    329326 Jun  4 19:49 log.45006595._039353.job.log.tgz.1
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas      7754 Jun  4 19:49 heartbeat.json
[2025-06-04 19:49:47] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 19:49 boinc_mmap_file
[2025-06-04 19:49:47] -rw-r--r-- 1 boincer umatlas        27 Jun  4 19:49 wrapper_checkpoint.txt
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas      4476 Jun  4 19:49 pilotlog.txt
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas    510439 Jun  4 19:49 log.45006595._039353.job.log.1
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas       357 Jun  4 19:49 output.list
[2025-06-04 19:49:47] -rw-r--r-- 1 boincer umatlas       620 Jun  4 19:49 runtime_log
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas    860160 Jun  4 19:49 result.tar.gz
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas       660 Jun  4 19:49 w3dLDmP2jg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJKZKDm4g74fm.diag
[2025-06-04 19:49:47] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 19:49 runtime_log.err
[2025-06-04 19:49:47] -rw-r--r-- 1 boincer umatlas     21157 Jun  4 19:49 stderr.txt
[2025-06-04 19:49:47] HITS file was successfully produced:
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas 176880546 Jun  4 19:48 shared/HITS.pool.root.1
[2025-06-04 19:49:47]  *** Contents of shared directory: ***
[2025-06-04 19:49:47] total 382184
[2025-06-04 19:49:47] -rw-r--r-- 2 boincer umatlas 213080092 Jun  4 18:27 ATLAS.root_0
[2025-06-04 19:49:47] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 18:27 start_atlas.sh
[2025-06-04 19:49:47] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 18:27 input.tar.gz
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas 176880546 Jun  4 19:48 HITS.pool.root.1
[2025-06-04 19:49:47] -rw------- 1 boincer umatlas    860160 Jun  4 19:49 result.tar.gz
19:49:48 (222536): run_atlas exited; CPU time 33849.459821
19:49:48 (222536): called boinc_finish(0)

</stderr_txt>
]]>

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