Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:04:26 (3663): wrapper (7.7.26015): starting
06:04:26 (3663): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 06:04:26] Arguments: --nthreads 8
[2025-06-05 06:04:26] Threads: 8
[2025-06-05 06:04:26] Checking for CVMFS
[2025-06-05 06:04:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:04:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:04:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:04:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:04:29] 2.11.2.0 22385 34325 88764 146804 3 16 17634989 25165824 4298 130560 0 19835317 99.810 20658906 2343 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 06:04:29] CVMFS is ok
[2025-06-05 06:04:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:04:29] Checking for apptainer binary...
[2025-06-05 06:04:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 06:04:29] Running /usr/bin/apptainer --version
[2025-06-05 06:04:29] apptainer version 1.3.2-1.el7
[2025-06-05 06:04:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:35:03] cg-vwn497.simple-grid.lan
[2025-06-05 06:35:03] apptainer works
[2025-06-05 06:35:03] Set ATHENA_PROC_NUMBER=8
[2025-06-05 06:35:03] Set ATHENA_CORE_NUMBER=8
[2025-06-05 06:35:03] Starting ATLAS job with PandaID=6677784744
[2025-06-05 06:35:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:10:21]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:10:21] 2025-06-05 08:06:46,136 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6677784744/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 13:10:21] 2025-06-05 08:06:46,136 | INFO     | extracted standard info from prmon json
[2025-06-05 13:10:21] 2025-06-05 08:06:46,137 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 13:10:21] 2025-06-05 08:06:46,137 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:10:21] 2025-06-05 08:06:46,137 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:10:21] 2025-06-05 08:06:46,137 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:10:21] 2025-06-05 08:06:46,141 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:10:21] 2025-06-05 08:06:46,142 | INFO     | sum of square deviations: 2299168690.0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,143 | INFO     | sum of deviations: 71148190946.0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,144 | INFO     | mean x: 1749104730.0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,144 | INFO     | mean y: 2403964.1692307694
[2025-06-05 13:10:21] 2025-06-05 08:06:46,144 | INFO     | -- intersect: -54123958253.55555
[2025-06-05 13:10:21] 2025-06-05 08:06:46,144 | INFO     | intersect: -54123958253.55555
[2025-06-05 13:10:21] 2025-06-05 08:06:46,144 | INFO     | chi2: 7.4416316633123065
[2025-06-05 13:10:21] 2025-06-05 08:06:46,145 | INFO     | sum of square deviations: 2126802667.5
[2025-06-05 13:10:21] 2025-06-05 08:06:46,146 | INFO     | sum of deviations: 81920998407.0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,147 | INFO     | mean x: 1749104577.5
[2025-06-05 13:10:21] 2025-06-05 08:06:46,147 | INFO     | mean y: 2413259.5789473685
[2025-06-05 13:10:21] 2025-06-05 08:06:46,147 | INFO     | -- intersect: -67370265690.2202
[2025-06-05 13:10:21] 2025-06-05 08:06:46,147 | INFO     | intersect: -67370265690.2202
[2025-06-05 13:10:21] 2025-06-05 08:06:46,147 | INFO     | chi2: 6.752846340203999
[2025-06-05 13:10:21] 2025-06-05 08:06:46,147 | INFO     | current chi2=6.752846340203999 (change=9.255837352230973 %)
[2025-06-05 13:10:21] 2025-06-05 08:06:46,147 | INFO     | right removable region: 189
[2025-06-05 13:10:21] 2025-06-05 08:06:46,148 | INFO     | sum of square deviations: 2126802667.5
[2025-06-05 13:10:21] 2025-06-05 08:06:46,149 | INFO     | sum of deviations: 4775886816.500004
[2025-06-05 13:10:21] 2025-06-05 08:06:46,149 | INFO     | mean x: 1749104882.5
[2025-06-05 13:10:21] 2025-06-05 08:06:46,149 | INFO     | mean y: 2462629.068421053
[2025-06-05 13:10:21] 2025-06-05 08:06:46,150 | INFO     | -- intersect: -3925276919.437453
[2025-06-05 13:10:21] 2025-06-05 08:06:46,150 | INFO     | intersect: -3925276919.437453
[2025-06-05 13:10:21] 2025-06-05 08:06:46,150 | INFO     | chi2: 2.485528573468344
[2025-06-05 13:10:21] 2025-06-05 08:06:46,150 | INFO     | current chi2=2.485528573468344 (change=66.59968289317314 %)
[2025-06-05 13:10:21] 2025-06-05 08:06:46,150 | INFO     | sum of square deviations: 1963274020.0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,152 | INFO     | sum of deviations: -30052973761.0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,152 | INFO     | mean x: 1749105035.0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,152 | INFO     | mean y: 2494885.7027027025
[2025-06-05 13:10:21] 2025-06-05 08:06:46,152 | INFO     | -- intersect: 26777059814.79395
[2025-06-05 13:10:21] 2025-06-05 08:06:46,152 | INFO     | intersect: 26777059814.79395
[2025-06-05 13:10:21] 2025-06-05 08:06:46,152 | INFO     | chi2: 0.9363517080629655
[2025-06-05 13:10:21] 2025-06-05 08:06:46,153 | INFO     | current chi2=0.9363517080629655 (change=62.327863857289465 %)
[2025-06-05 13:10:21] 2025-06-05 08:06:46,153 | INFO     | sum of square deviations: 1808350185.0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,154 | INFO     | sum of deviations: -28740510388.0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,154 | INFO     | mean x: 1749105187.5
[2025-06-05 13:10:21] 2025-06-05 08:06:46,154 | INFO     | mean y: 2493524.188888889
[2025-06-05 13:10:21] 2025-06-05 08:06:46,154 | INFO     | -- intersect: 27801410032.745796
[2025-06-05 13:10:21] 2025-06-05 08:06:46,154 | INFO     | intersect: 27801410032.745796
[2025-06-05 13:10:21] 2025-06-05 08:06:46,155 | INFO     | chi2: 0.9136223205579233
[2025-06-05 13:10:21] 2025-06-05 08:06:46,155 | INFO     | current chi2=0.9136223205579233 (change=2.4274412391538913 %)
[2025-06-05 13:10:21] 2025-06-05 08:06:46,155 | INFO     | left removable region: 30
[2025-06-05 13:10:21] 2025-06-05 08:06:46,155 | INFO     | sum of square deviations: 1246386160.0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,156 | INFO     | sum of deviations: 1968576750.0000002
[2025-06-05 13:10:21] 2025-06-05 08:06:46,156 | INFO     | mean x: 1749105462.0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,156 | INFO     | mean y: 2484773.4088050313
[2025-06-05 13:10:21] 2025-06-05 08:06:46,157 | INFO     | -- intersect: -2760100736.8404493
[2025-06-05 13:10:21] 2025-06-05 08:06:46,157 | INFO     | intersect: -2760100736.8404493
[2025-06-05 13:10:21] 2025-06-05 08:06:46,157 | INFO     | chi2: 0.00030004348540062345
[2025-06-05 13:10:21] 2025-06-05 08:06:46,157 | INFO     | -- intersect: -2760100736.8404493
[2025-06-05 13:10:21] 2025-06-05 08:06:46,157 | INFO     | current memory leak: 1.58 B/s (using 159 data points, chi2=0.00)
[2025-06-05 13:10:21] 2025-06-05 08:06:46,158 | INFO     | ..............................
[2025-06-05 13:10:21] 2025-06-05 08:06:46,158 | INFO     | . Timing measurements:
[2025-06-05 13:10:21] 2025-06-05 08:06:46,158 | INFO     | . get job = 0 s
[2025-06-05 13:10:21] 2025-06-05 08:06:46,158 | INFO     | . initial setup = 11 s
[2025-06-05 13:10:21] 2025-06-05 08:06:46,158 | INFO     | . payload setup = 176 s
[2025-06-05 13:10:21] 2025-06-05 08:06:46,159 | INFO     | . stage-in = 0 s
[2025-06-05 13:10:21] 2025-06-05 08:06:46,159 | INFO     | . payload execution = 12025 s
[2025-06-05 13:10:21] 2025-06-05 08:06:46,159 | INFO     | . stage-out = 4 s
[2025-06-05 13:10:21] 2025-06-05 08:06:46,159 | INFO     | . log creation = 1 s
[2025-06-05 13:10:21] 2025-06-05 08:06:46,159 | INFO     | ..............................
[2025-06-05 13:10:21] 2025-06-05 08:06:46,485 | INFO     | 
[2025-06-05 13:10:21] 2025-06-05 08:06:46,485 | INFO     | job summary report
[2025-06-05 13:10:21] 2025-06-05 08:06:46,485 | INFO     | --------------------------------------------------
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | PanDA job id: 6677784744
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | task id: 45006595
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | errors: (none)
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | pilot state: finished 
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | transexitcode: 0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | exeerrorcode: 0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | exeerrordiag: 
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | exitcode: 0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | exitmsg: OK
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | cpuconsumptiontime: 44129 s
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | nevents: 400
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | neventsw: 0
[2025-06-05 13:10:21] 2025-06-05 08:06:46,486 | INFO     | pid: 31565
[2025-06-05 13:10:21] 2025-06-05 08:06:46,487 | INFO     | pgrp: 31565
[2025-06-05 13:10:21] 2025-06-05 08:06:46,487 | INFO     | corecount: 8
[2025-06-05 13:10:21] 2025-06-05 08:06:46,487 | INFO     | event service: False
[2025-06-05 13:10:21] 2025-06-05 08:06:46,487 | INFO     | sizes: {0: 2396514, 1: 2397200, 2: 2397399, 13: 2397399, 24: 2397455, 34: 2397483, 45: 2397639, 56: 2397667, 67: 2397695, 77: 2397723, 88: 2397779, 94: 2398293, 99
[2025-06-05 13:10:21] 2025-06-05 08:06:46,487 | INFO     | --------------------------------------------------
[2025-06-05 13:10:21] 2025-06-05 08:06:46,487 | INFO     | 
[2025-06-05 13:10:21] 2025-06-05 08:06:46,487 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-05 13:10:21] 2025-06-05 08:06:47,000 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,000 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,000 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,000 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,000 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,001 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,001 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,001 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,001 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,001 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,001 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,001 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,001 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,002 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:10:21] 2025-06-05 08:06:47,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,002 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:10:21] 2025-06-05 08:06:47,002 | INFO     | job 6677784744 has completed (purged errors)
[2025-06-05 13:10:21] 2025-06-05 08:06:47,002 | INFO     | overall cleanup function is called
[2025-06-05 13:10:21] 2025-06-05 08:06:48,011 | INFO     | --- collectZombieJob: --- 10, [31565]
[2025-06-05 13:10:21] 2025-06-05 08:06:48,011 | INFO     | zombie collector waiting for pid 31565
[2025-06-05 13:10:21] 2025-06-05 08:06:48,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:10:21] 2025-06-05 08:06:48,012 | INFO     | collected zombie processes
[2025-06-05 13:10:21] 2025-06-05 08:06:48,012 | INFO     | will attempt to kill all subprocesses of pid=31565
[2025-06-05 13:10:21] 2025-06-05 08:06:48,123 | INFO     | process IDs to be killed: [31565] (in reverse order)
[2025-06-05 13:10:21] 2025-06-05 08:06:48,872 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:10:21] 2025-06-05 08:06:48,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:10:21] 2025-06-05 08:06:48,876 | INFO     | did not find any defunct processes belonging to 31565
[2025-06-05 13:10:21] 2025-06-05 08:06:48,880 | INFO     | did not find any defunct processes belonging to 31565
[2025-06-05 13:10:21] 2025-06-05 08:06:48,880 | INFO     | ready for new job
[2025-06-05 13:10:21] 2025-06-05 08:06:48,880 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:10:21] 2025-06-05 08:06:48,883 | INFO     | **************************************
[2025-06-05 13:10:21] 2025-06-05 08:06:48,883 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:10:21] 2025-06-05 08:06:48,883 | INFO     | **************************************
[2025-06-05 13:10:21] 2025-06-05 08:06:48,883 | INFO     | 
[2025-06-05 13:10:21] 2025-06-05 08:06:48,884 | INFO     | pilot is running in a VM
[2025-06-05 13:10:21] 2025-06-05 08:06:48,884 | INFO     | architecture information:
[2025-06-05 13:10:21] 2025-06-05 08:06:48,896 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:10:21] 2025-06-05 08:06:49,126 | INFO     | cat /etc/os-release:
[2025-06-05 13:10:21] NAME="CentOS Linux"
[2025-06-05 13:10:21] VERSION="7 (Core)"
[2025-06-05 13:10:21] ID="centos"
[2025-06-05 13:10:21] ID_LIKE="rhel fedora"
[2025-06-05 13:10:21] VERSION_ID="7"
[2025-06-05 13:10:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:10:21] ANSI_COLOR="0;31"
[2025-06-05 13:10:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:10:21] HOME_URL="https://www.centos.org/"
[2025-06-05 13:10:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:10:21] 
[2025-06-05 13:10:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:10:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:10:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:10:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:10:21] 
[2025-06-05 13:10:21] 2025-06-05 08:06:49,126 | INFO     | **************************************
[2025-06-05 13:10:21] 2025-06-05 08:06:49,629 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-05 13:10:21] 2025-06-05 08:06:49,890 | INFO     | sufficient remaining disk space (497586012160 B)
[2025-06-05 13:10:21] 2025-06-05 08:06:49,890 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:10:21] 2025-06-05 08:06:49,890 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:10:21] 2025-06-05 08:06:49,891 | INFO     | update_server=False
[2025-06-05 13:10:21] 2025-06-05 08:06:49,891 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:10:21] 2025-06-05 08:06:49,892 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:10:21] 2025-06-05 08:06:49,893 | INFO     | aborting loop
[2025-06-05 13:10:21] 2025-06-05 08:06:50,509 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:10:21] 2025-06-05 08:06:50,510 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:10:21] 2025-06-05 08:06:50,510 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:10:21] 2025-06-05 08:06:50,645 | INFO     | all payload control threads have been joined
[2025-06-05 13:10:21] 2025-06-05 08:06:50,828 | INFO     | all data control threads have been joined
[2025-06-05 13:10:21] 2025-06-05 08:06:50,897 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:50,901 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:50,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:10:21] 2025-06-05 08:06:50,983 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:51,300 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:10:21] 2025-06-05 08:06:51,363 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:51,435 | INFO     | all job control threads have been joined
[2025-06-05 13:10:21] 2025-06-05 08:06:51,475 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:51,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:10:21] 2025-06-05 08:06:51,651 | INFO     | [payload] control thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:51,696 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:51,821 | INFO     | [job] validate thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:51,834 | INFO     | [data] control thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:52,004 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:52,187 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:52,224 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:52,307 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:52,442 | INFO     | [job] control thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:52,977 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:55,485 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:10:21] 2025-06-05 08:06:56,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140519493388096)>', '<ExcThread(monitor, started 140518897997568)>']
[2025-06-05 13:10:21] 2025-06-05 08:06:57,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:10:21] 2025-06-05 08:06:57,552 | INFO     | [monitor] control thread has ended
[2025-06-05 13:10:21] 2025-06-05 08:07:01,833 | INFO     | all workflow threads have been joined
[2025-06-05 13:10:21] 2025-06-05 08:07:01,834 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:10:21] 2025-06-05 08:07:01,834 | INFO     | traces error code: 0
[2025-06-05 13:10:21] 2025-06-05 08:07:01,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:10:21] 2025-06-05 08:07:02,300 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:10:21] 2025-06-05 08:07:02,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:10:21] 2025-06-05 08:07:02,508 [wrapper] pilotpid: 24906
[2025-06-05 13:10:21] 2025-06-05 08:07:02,607 [wrapper] Pilot exit status: 0
[2025-06-05 13:10:21] 2025-06-05 08:07:03,090 [wrapper] pandaids: 6677784744
[2025-06-05 13:10:21] 2025-06-05 08:07:03,892 [wrapper] cleanup supervisor_pilot 29698 24907
[2025-06-05 13:10:21] 2025-06-05 08:07:03,988 [wrapper] Test setup, not cleaning
[2025-06-05 13:10:21] 2025-06-05 08:07:04,064 [wrapper] apfmon messages muted
[2025-06-05 13:10:21] 2025-06-05 08:07:04,175 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:10:21] 2025-06-05 08:07:04,256 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:10:21]  *** Error codes and diagnostics ***
[2025-06-05 13:10:21]     "exeErrorCode": 0,
[2025-06-05 13:10:21]     "exeErrorDiag": "",
[2025-06-05 13:10:21]     "pilotErrorCode": 0,
[2025-06-05 13:10:21]     "pilotErrorDiag": "",
[2025-06-05 13:10:21]  *** Listing of results directory ***
[2025-06-05 13:10:21] total 386364
[2025-06-05 13:10:21] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-05 13:10:21] -rw-r--r--. 1 boinc boinc      5111 Jun  3 18:51 queuedata.json
[2025-06-05 13:10:21] -rwx------. 1 boinc boinc     37140 Jun  3 18:51 runpilot2-wrapper.sh
[2025-06-05 13:10:21] -rw-r--r--. 1 boinc boinc       100 Jun  5 06:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:10:21] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 06:04 run_atlas
[2025-06-05 13:10:21] -rw-r--r--. 1 boinc boinc       105 Jun  5 06:04 job.xml
[2025-06-05 13:10:21] -rw-r--r--. 1 boinc boinc      6392 Jun  5 06:04 init_data.xml
[2025-06-05 13:10:21] -rw-r--r--. 2 boinc boinc 213080092 Jun  5 06:04 EVNT.45006593._001578.pool.root.1
[2025-06-05 13:10:21] -rw-r--r--. 2 boinc boinc     15093 Jun  5 06:04 start_atlas.sh
[2025-06-05 13:10:21] drwxrwx--x. 2 boinc boinc        68 Jun  5 06:04 shared
[2025-06-05 13:10:21] -rw-r--r--. 2 boinc boinc    508880 Jun  5 06:04 input.tar.gz
[2025-06-05 13:10:21] -rw-r--r--. 1 boinc boinc         0 Jun  5 06:04 boinc_lockfile
[2025-06-05 13:10:21] -rw-r--r--. 1 boinc boinc      2525 Jun  5 06:35 pandaJob.out
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc    987109 Jun  5 06:38 agis_schedconf.cvmfs.json
[2025-06-05 13:10:21] drwx------. 4 boinc boinc      4096 Jun  5 06:38 pilot3
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc 175849800 Jun  5 10:03 HITS.45006595._039348.pool.root.1
[2025-06-05 13:10:21] -rw-r--r--. 1 boinc boinc       531 Jun  5 10:03 boinc_task_state.xml
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc      1014 Jun  5 10:04 memory_monitor_summary.json
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc   1598969 Jun  5 10:04 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc    370196 Jun  5 10:04 log.45006595._039348.job.log.tgz.1
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc        95 Jun  5 10:06 pilot_heartbeat.json
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc      7690 Jun  5 10:06 heartbeat.json
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc      4417 Jun  5 10:07 pilotlog.txt
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc   1071538 Jun  5 10:07 log.45006595._039348.job.log.1
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc       357 Jun  5 10:07 output.list
[2025-06-05 13:10:21] -rw-r--r--. 1 boinc boinc       620 Jun  5 10:07 runtime_log
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc   1464320 Jun  5 10:07 result.tar.gz
[2025-06-05 13:10:21] -rw-r--r--. 1 boinc boinc      8673 Jun  5 10:07 runtime_log.err
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc       657 Jun  5 10:07 p45KDmP2jg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEKZKDmCorTdm.diag
[2025-06-05 13:10:21] -rw-r--r--. 1 boinc boinc      8192 Jun  5 13:10 boinc_mmap_file
[2025-06-05 13:10:21] -rw-r--r--. 1 boinc boinc        28 Jun  5 13:10 wrapper_checkpoint.txt
[2025-06-05 13:10:21] -rw-r--r--. 1 boinc boinc     20527 Jun  5 13:10 stderr.txt
[2025-06-05 13:10:21] HITS file was successfully produced:
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc 175849800 Jun  5 10:03 shared/HITS.pool.root.1
[2025-06-05 13:10:21]  *** Contents of shared directory: ***
[2025-06-05 13:10:21] total 381768
[2025-06-05 13:10:21] -rw-r--r--. 2 boinc boinc 213080092 Jun  5 06:04 ATLAS.root_0
[2025-06-05 13:10:21] -rw-r--r--. 2 boinc boinc     15093 Jun  5 06:04 start_atlas.sh
[2025-06-05 13:10:21] -rw-r--r--. 2 boinc boinc    508880 Jun  5 06:04 input.tar.gz
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc 175849800 Jun  5 10:03 HITS.pool.root.1
[2025-06-05 13:10:21] -rw-------. 1 boinc boinc   1464320 Jun  5 10:07 result.tar.gz
13:10:23 (3663): run_atlas exited; CPU time 44271.951445
13:10:23 (3663): called boinc_finish(0)

</stderr_txt>
]]>

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