Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:44:27 (698): wrapper (7.7.26015): starting
03:44:27 (698): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 03:44:27] Arguments: --nthreads 8
[2025-06-05 03:44:27] Threads: 8
[2025-06-05 03:44:27] Checking for CVMFS
[2025-06-05 03:44:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 03:44:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 03:44:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 03:44:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 03:44:28] 2.11.2.0 4192 34185 93368 146800 0 208 16008165 25165825 3956 130560 0 17416444 99.831 18057187 2008 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 03:44:28] CVMFS is ok
[2025-06-05 03:44:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:44:28] Checking for apptainer binary...
[2025-06-05 03:44:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 03:44:28] Running /usr/bin/apptainer --version
[2025-06-05 03:44:29] apptainer version 1.3.2-1.el7
[2025-06-05 03:44:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:44:32] cg-vwn295.simple-grid.lan
[2025-06-05 03:44:32] apptainer works
[2025-06-05 03:44:43] Set ATHENA_PROC_NUMBER=8
[2025-06-05 03:44:43] Set ATHENA_CORE_NUMBER=8
[2025-06-05 03:44:43] Starting ATLAS job with PandaID=6667033587
[2025-06-05 03:44:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:55:14]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:55:14] 2025-06-05 06:54:53,894 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:55:14] 2025-06-05 06:54:53,894 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:55:14] 2025-06-05 06:54:53,895 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:55:14] 2025-06-05 06:54:53,895 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:55:14] 2025-06-05 06:54:53,901 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:55:14] 2025-06-05 06:54:53,902 | INFO     | sum of square deviations: 8711530780.0
[2025-06-05 08:55:14] 2025-06-05 06:54:53,905 | INFO     | sum of deviations: 16022677361.999992
[2025-06-05 08:55:14] 2025-06-05 06:54:53,906 | INFO     | mean x: 1749097209.5
[2025-06-05 08:55:14] 2025-06-05 06:54:53,906 | INFO     | mean y: 2495770.539473684
[2025-06-05 08:55:14] 2025-06-05 06:54:53,906 | INFO     | -- intersect: -3214530142.6253543
[2025-06-05 08:55:14] 2025-06-05 06:54:53,906 | INFO     | intersect: -3214530142.6253543
[2025-06-05 08:55:14] 2025-06-05 06:54:53,906 | INFO     | chi2: 2.3608912780264113
[2025-06-05 08:55:14] 2025-06-05 06:54:53,907 | INFO     | sum of square deviations: 8288713550.0
[2025-06-05 08:55:14] 2025-06-05 06:54:53,910 | INFO     | sum of deviations: 35487212868.0
[2025-06-05 08:55:14] 2025-06-05 06:54:53,910 | INFO     | mean x: 1749097057.0
[2025-06-05 08:55:14] 2025-06-05 06:54:53,910 | INFO     | mean y: 2502693.3879598663
[2025-06-05 08:55:14] 2025-06-05 06:54:53,910 | INFO     | -- intersect: -7486063441.045692
[2025-06-05 08:55:14] 2025-06-05 06:54:53,910 | INFO     | intersect: -7486063441.045692
[2025-06-05 08:55:14] 2025-06-05 06:54:53,911 | INFO     | chi2: 1.591563576537602
[2025-06-05 08:55:14] 2025-06-05 06:54:53,911 | INFO     | current chi2=1.591563576537602 (change=32.5863248616823 %)
[2025-06-05 08:55:14] 2025-06-05 06:54:53,912 | INFO     | sum of square deviations: 7879803557.5
[2025-06-05 08:55:14] 2025-06-05 06:54:53,914 | INFO     | sum of deviations: 34339735280.000004
[2025-06-05 08:55:14] 2025-06-05 06:54:53,915 | INFO     | mean x: 1749096904.5
[2025-06-05 08:55:14] 2025-06-05 06:54:53,915 | INFO     | mean y: 2502265.4081632653
[2025-06-05 08:55:14] 2025-06-05 06:54:53,915 | INFO     | -- intersect: -7619962462.462998
[2025-06-05 08:55:14] 2025-06-05 06:54:53,915 | INFO     | intersect: -7619962462.462998
[2025-06-05 08:55:14] 2025-06-05 06:54:53,915 | INFO     | chi2: 1.5919841548869853
[2025-06-05 08:55:14] 2025-06-05 06:54:53,916 | INFO     | current chi2=1.5919841548869853 (change=-0.026425482185155037 %)
[2025-06-05 08:55:14] 2025-06-05 06:54:53,916 | INFO     | right removable region: 293
[2025-06-05 08:55:14] 2025-06-05 06:54:53,916 | INFO     | sum of square deviations: 8288713550.0
[2025-06-05 08:55:14] 2025-06-05 06:54:53,919 | INFO     | sum of deviations: -31862420909.0
[2025-06-05 08:55:14] 2025-06-05 06:54:53,919 | INFO     | mean x: 1749097362.0
[2025-06-05 08:55:14] 2025-06-05 06:54:53,919 | INFO     | mean y: 2512921.8795986623
[2025-06-05 08:55:14] 2025-06-05 06:54:53,919 | INFO     | -- intersect: 6726171065.291436
[2025-06-05 08:55:14] 2025-06-05 06:54:53,920 | INFO     | intersect: 6726171065.291436
[2025-06-05 08:55:14] 2025-06-05 06:54:53,920 | INFO     | chi2: 0.9117020845945445
[2025-06-05 08:55:14] 2025-06-05 06:54:53,920 | INFO     | current chi2=0.9117020845945445 (change=61.38313978792439 %)
[2025-06-05 08:55:14] 2025-06-05 06:54:53,921 | INFO     | sum of square deviations: 7879803557.5
[2025-06-05 08:55:14] 2025-06-05 06:54:53,924 | INFO     | sum of deviations: -31069485416.5
[2025-06-05 08:55:14] 2025-06-05 06:54:53,924 | INFO     | mean x: 1749097514.5
[2025-06-05 08:55:14] 2025-06-05 06:54:53,924 | INFO     | mean y: 2512607.0918367347
[2025-06-05 08:55:14] 2025-06-05 06:54:53,924 | INFO     | -- intersect: 6899075360.49575
[2025-06-05 08:55:14] 2025-06-05 06:54:53,924 | INFO     | intersect: 6899075360.49575
[2025-06-05 08:55:14] 2025-06-05 06:54:53,925 | INFO     | chi2: 0.8977343239560402
[2025-06-05 08:55:14] 2025-06-05 06:54:53,925 | INFO     | current chi2=0.8977343239560402 (change=1.5320531645725084 %)
[2025-06-05 08:55:14] 2025-06-05 06:54:53,925 | INFO     | left removable region: 20
[2025-06-05 08:55:14] 2025-06-05 06:54:53,925 | INFO     | sum of square deviations: 6309000152.0
[2025-06-05 08:55:14] 2025-06-05 06:54:53,928 | INFO     | sum of deviations: 7248075693.0
[2025-06-05 08:55:14] 2025-06-05 06:54:53,928 | INFO     | mean x: 1749097484.0
[2025-06-05 08:55:14] 2025-06-05 06:54:53,929 | INFO     | mean y: 2511760.7032967033
[2025-06-05 08:55:14] 2025-06-05 06:54:53,929 | INFO     | -- intersect: -2006933579.7678027
[2025-06-05 08:55:14] 2025-06-05 06:54:53,929 | INFO     | intersect: -2006933579.7678027
[2025-06-05 08:55:14] 2025-06-05 06:54:53,929 | INFO     | chi2: 0.03531486211988418
[2025-06-05 08:55:14] 2025-06-05 06:54:53,930 | INFO     | -- intersect: -2006933579.7678027
[2025-06-05 08:55:14] 2025-06-05 06:54:53,930 | INFO     | current memory leak: 1.15 B/s (using 273 data points, chi2=0.04)
[2025-06-05 08:55:14] 2025-06-05 06:54:53,931 | INFO     | ..............................
[2025-06-05 08:55:14] 2025-06-05 06:54:53,931 | INFO     | . Timing measurements:
[2025-06-05 08:55:14] 2025-06-05 06:54:53,931 | INFO     | . get job = 0 s
[2025-06-05 08:55:14] 2025-06-05 06:54:53,931 | INFO     | . initial setup = 2 s
[2025-06-05 08:55:14] 2025-06-05 06:54:53,931 | INFO     | . payload setup = 14 s
[2025-06-05 08:55:14] 2025-06-05 06:54:53,931 | INFO     | . stage-in = 0 s
[2025-06-05 08:55:14] 2025-06-05 06:54:53,931 | INFO     | . payload execution = 18526 s
[2025-06-05 08:55:14] 2025-06-05 06:54:53,932 | INFO     | . stage-out = 1 s
[2025-06-05 08:55:14] 2025-06-05 06:54:53,932 | INFO     | . log creation = 0 s
[2025-06-05 08:55:14] 2025-06-05 06:54:53,932 | INFO     | ..............................
[2025-06-05 08:55:14] 2025-06-05 06:54:54,061 | INFO     | 
[2025-06-05 08:55:14] 2025-06-05 06:54:54,061 | INFO     | job summary report
[2025-06-05 08:55:14] 2025-06-05 06:54:54,061 | INFO     | --------------------------------------------------
[2025-06-05 08:55:14] 2025-06-05 06:54:54,061 | INFO     | PanDA job id: 6667033587
[2025-06-05 08:55:14] 2025-06-05 06:54:54,061 | INFO     | task id: 44871837
[2025-06-05 08:55:14] 2025-06-05 06:54:54,062 | INFO     | errors: (none)
[2025-06-05 08:55:14] 2025-06-05 06:54:54,062 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:55:14] 2025-06-05 06:54:54,062 | INFO     | pilot state: finished 
[2025-06-05 08:55:14] 2025-06-05 06:54:54,062 | INFO     | transexitcode: 0
[2025-06-05 08:55:14] 2025-06-05 06:54:54,062 | INFO     | exeerrorcode: 0
[2025-06-05 08:55:14] 2025-06-05 06:54:54,062 | INFO     | exeerrordiag: 
[2025-06-05 08:55:14] 2025-06-05 06:54:54,062 | INFO     | exitcode: 0
[2025-06-05 08:55:14] 2025-06-05 06:54:54,062 | INFO     | exitmsg: OK
[2025-06-05 08:55:14] 2025-06-05 06:54:54,062 | INFO     | cpuconsumptiontime: 71214 s
[2025-06-05 08:55:14] 2025-06-05 06:54:54,062 | INFO     | nevents: 400
[2025-06-05 08:55:14] 2025-06-05 06:54:54,062 | INFO     | neventsw: 0
[2025-06-05 08:55:14] 2025-06-05 06:54:54,062 | INFO     | pid: 14995
[2025-06-05 08:55:14] 2025-06-05 06:54:54,062 | INFO     | pgrp: 14995
[2025-06-05 08:55:14] 2025-06-05 06:54:54,063 | INFO     | corecount: 8
[2025-06-05 08:55:14] 2025-06-05 06:54:54,063 | INFO     | event service: False
[2025-06-05 08:55:14] 2025-06-05 06:54:54,063 | INFO     | sizes: {0: 2396562, 1: 2397419, 2: 2397447, 12: 2397447, 13: 2397681, 23: 2397737, 18544: 2429488, 18546: 2438431, 18549: 2438487, 18561: 2438657}
[2025-06-05 08:55:14] 2025-06-05 06:54:54,063 | INFO     | --------------------------------------------------
[2025-06-05 08:55:14] 2025-06-05 06:54:54,063 | INFO     | 
[2025-06-05 08:55:14] 2025-06-05 06:54:54,063 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-05 08:55:14] 2025-06-05 06:54:54,118 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,118 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,118 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,118 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,119 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,119 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,119 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,119 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,120 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:55:14] 2025-06-05 06:54:54,120 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,120 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:55:14] 2025-06-05 06:54:54,120 | INFO     | job 6667033587 has completed (purged errors)
[2025-06-05 08:55:14] 2025-06-05 06:54:54,120 | INFO     | overall cleanup function is called
[2025-06-05 08:55:14] 2025-06-05 06:54:55,130 | INFO     | --- collectZombieJob: --- 10, [14995]
[2025-06-05 08:55:14] 2025-06-05 06:54:55,130 | INFO     | zombie collector waiting for pid 14995
[2025-06-05 08:55:14] 2025-06-05 06:54:55,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:55:14] 2025-06-05 06:54:55,131 | INFO     | collected zombie processes
[2025-06-05 08:55:14] 2025-06-05 06:54:55,131 | INFO     | will attempt to kill all subprocesses of pid=14995
[2025-06-05 08:55:14] 2025-06-05 06:54:55,231 | INFO     | process IDs to be killed: [14995] (in reverse order)
[2025-06-05 08:55:14] 2025-06-05 06:54:55,326 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:55:14] 2025-06-05 06:54:55,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:55:14] 2025-06-05 06:54:55,330 | INFO     | did not find any defunct processes belonging to 14995
[2025-06-05 08:55:14] 2025-06-05 06:54:55,333 | INFO     | did not find any defunct processes belonging to 14995
[2025-06-05 08:55:14] 2025-06-05 06:54:55,334 | INFO     | ready for new job
[2025-06-05 08:55:14] 2025-06-05 06:54:55,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:55:14] 2025-06-05 06:54:55,337 | INFO     | **************************************
[2025-06-05 08:55:14] 2025-06-05 06:54:55,337 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:55:14] 2025-06-05 06:54:55,337 | INFO     | **************************************
[2025-06-05 08:55:14] 2025-06-05 06:54:55,337 | INFO     | 
[2025-06-05 08:55:14] 2025-06-05 06:54:55,338 | INFO     | pilot is running in a VM
[2025-06-05 08:55:14] 2025-06-05 06:54:55,338 | INFO     | architecture information:
[2025-06-05 08:55:14] 2025-06-05 06:54:55,338 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:55:14] 2025-06-05 06:54:55,387 | INFO     | cat /etc/os-release:
[2025-06-05 08:55:14] NAME="CentOS Linux"
[2025-06-05 08:55:14] VERSION="7 (Core)"
[2025-06-05 08:55:14] ID="centos"
[2025-06-05 08:55:14] ID_LIKE="rhel fedora"
[2025-06-05 08:55:14] VERSION_ID="7"
[2025-06-05 08:55:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:55:14] ANSI_COLOR="0;31"
[2025-06-05 08:55:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:55:14] HOME_URL="https://www.centos.org/"
[2025-06-05 08:55:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:55:14] 
[2025-06-05 08:55:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:55:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:55:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:55:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:55:14] 
[2025-06-05 08:55:14] 2025-06-05 06:54:55,387 | INFO     | **************************************
[2025-06-05 08:55:14] 2025-06-05 06:54:55,890 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-05 08:55:14] 2025-06-05 06:54:55,924 | INFO     | sufficient remaining disk space (497158193152 B)
[2025-06-05 08:55:14] 2025-06-05 06:54:55,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:55:14] 2025-06-05 06:54:55,925 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:55:14] 2025-06-05 06:54:55,925 | INFO     | update_server=False
[2025-06-05 08:55:14] 2025-06-05 06:54:55,925 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:55:14] 2025-06-05 06:54:55,926 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:55:14] 2025-06-05 06:54:55,926 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 08:55:14] 2025-06-05 06:54:55,926 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:55:14] 2025-06-05 06:54:55,926 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:55:14] 2025-06-05 06:54:55,926 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:55:14] 2025-06-05 06:54:55,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:55:14] 2025-06-05 06:54:55,997 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:55:14] 2025-06-05 06:54:55,998 | INFO     | aborting loop
[2025-06-05 08:55:14] 2025-06-05 06:54:56,222 | INFO     | all data control threads have been joined
[2025-06-05 08:55:14] 2025-06-05 06:54:56,685 | INFO     | all payload control threads have been joined
[2025-06-05 08:55:14] 2025-06-05 06:54:56,931 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:54:56,935 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:54:57,003 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:54:57,038 | INFO     | all job control threads have been joined
[2025-06-05 08:55:14] 2025-06-05 06:54:57,228 | INFO     | [data] control thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:54:57,385 | INFO     | [job] validate thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:54:57,560 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:55:14] 2025-06-05 06:54:57,691 | INFO     | [payload] control thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:54:57,728 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:54:57,809 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:54:57,875 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:54:57,918 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:54:57,932 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:54:58,044 | INFO     | [job] control thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:54:58,081 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:54:58,366 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:55:01,569 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:55:06,527 | INFO     | job.realtimelogging is not enabled
[2025-06-05 08:55:14] 2025-06-05 06:55:07,532 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:55:14] 2025-06-05 06:55:08,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687394142016)>', '<ExcThread(monitor, started 140686812768000)>']
[2025-06-05 08:55:14] 2025-06-05 06:55:08,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:55:14] 2025-06-05 06:55:08,988 | INFO     | [monitor] control thread has ended
[2025-06-05 08:55:14] 2025-06-05 06:55:13,915 | INFO     | all workflow threads have been joined
[2025-06-05 08:55:14] 2025-06-05 06:55:13,915 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:55:14] 2025-06-05 06:55:13,916 | INFO     | traces error code: 0
[2025-06-05 08:55:14] 2025-06-05 06:55:13,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:55:14] 2025-06-05 06:55:14,244 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:55:14] 2025-06-05 06:55:14,288 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:55:14] 2025-06-05 06:55:14,349 [wrapper] pilotpid: 4432
[2025-06-05 08:55:14] 2025-06-05 06:55:14,377 [wrapper] Pilot exit status: 0
[2025-06-05 08:55:14] 2025-06-05 06:55:14,448 [wrapper] pandaids: 6667033587
[2025-06-05 08:55:14] 2025-06-05 06:55:14,494 [wrapper] cleanup supervisor_pilot 23278 4433
[2025-06-05 08:55:14] 2025-06-05 06:55:14,514 [wrapper] Test setup, not cleaning
[2025-06-05 08:55:14] 2025-06-05 06:55:14,555 [wrapper] apfmon messages muted
[2025-06-05 08:55:14] 2025-06-05 06:55:14,626 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:55:14] 2025-06-05 06:55:14,648 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:55:14]  *** Error codes and diagnostics ***
[2025-06-05 08:55:14]     "exeErrorCode": 0,
[2025-06-05 08:55:14]     "exeErrorDiag": "",
[2025-06-05 08:55:14]     "pilotErrorCode": 0,
[2025-06-05 08:55:14]     "pilotErrorDiag": "",
[2025-06-05 08:55:14]  *** Listing of results directory ***
[2025-06-05 08:55:14] total 425636
[2025-06-05 08:55:14] -rw-r--r--. 1 boinc boinc    495897 May 27 14:18 pilot3.tar.gz
[2025-06-05 08:55:14] -rw-r--r--. 1 boinc boinc      5111 May 27 15:06 queuedata.json
[2025-06-05 08:55:14] -rwx------. 1 boinc boinc     37140 May 27 15:07 runpilot2-wrapper.sh
[2025-06-05 08:55:14] -rw-r--r--. 1 boinc boinc       100 Jun  5 03:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:55:14] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 03:44 run_atlas
[2025-06-05 08:55:14] -rw-r--r--. 1 boinc boinc       105 Jun  5 03:44 job.xml
[2025-06-05 08:55:14] -rw-r--r--. 1 boinc boinc      6392 Jun  5 03:44 init_data.xml
[2025-06-05 08:55:14] -rw-r--r--. 2 boinc boinc 227322494 Jun  5 03:44 EVNT.44871834._002667.pool.root.1
[2025-06-05 08:55:14] -rw-r--r--. 2 boinc boinc     15093 Jun  5 03:44 start_atlas.sh
[2025-06-05 08:55:14] drwxrwx--x. 2 boinc boinc        68 Jun  5 03:44 shared
[2025-06-05 08:55:14] -rw-r--r--. 2 boinc boinc    508875 Jun  5 03:44 input.tar.gz
[2025-06-05 08:55:14] -rw-r--r--. 1 boinc boinc         0 Jun  5 03:44 boinc_lockfile
[2025-06-05 08:55:14] -rw-r--r--. 1 boinc boinc      2558 Jun  5 03:44 pandaJob.out
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc    987109 Jun  5 03:44 agis_schedconf.cvmfs.json
[2025-06-05 08:55:14] drwx------. 4 boinc boinc      4096 Jun  5 03:45 pilot3
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc 200715104 Jun  5 08:53 HITS.44871837._067776.pool.root.1
[2025-06-05 08:55:14] -rw-r--r--. 1 boinc boinc       531 Jun  5 08:53 boinc_task_state.xml
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc      1012 Jun  5 08:54 memory_monitor_summary.json
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc   1598969 Jun  5 08:54 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc    412220 Jun  5 08:54 log.44871837._067776.job.log.tgz.1
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc        95 Jun  5 08:54 pilot_heartbeat.json
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc      7678 Jun  5 08:54 heartbeat.json
[2025-06-05 08:55:14] -rw-r--r--. 1 boinc boinc      8192 Jun  5 08:55 boinc_mmap_file
[2025-06-05 08:55:14] -rw-r--r--. 1 boinc boinc        28 Jun  5 08:55 wrapper_checkpoint.txt
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc      4612 Jun  5 08:55 pilotlog.txt
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc   1585180 Jun  5 08:55 log.44871837._067776.job.log.1
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc       357 Jun  5 08:55 output.list
[2025-06-05 08:55:14] -rw-r--r--. 1 boinc boinc       620 Jun  5 08:55 runtime_log
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc   2017280 Jun  5 08:55 result.tar.gz
[2025-06-05 08:55:14] -rw-r--r--. 1 boinc boinc      8673 Jun  5 08:55 runtime_log.err
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc       657 Jun  5 08:55 lj6LDmyC9d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgUZKDmdipcdn.diag
[2025-06-05 08:55:14] -rw-r--r--. 1 boinc boinc     20237 Jun  5 08:55 stderr.txt
[2025-06-05 08:55:14] HITS file was successfully produced:
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc 200715104 Jun  5 08:53 shared/HITS.pool.root.1
[2025-06-05 08:55:14]  *** Contents of shared directory: ***
[2025-06-05 08:55:14] total 420496
[2025-06-05 08:55:14] -rw-r--r--. 2 boinc boinc 227322494 Jun  5 03:44 ATLAS.root_0
[2025-06-05 08:55:14] -rw-r--r--. 2 boinc boinc     15093 Jun  5 03:44 start_atlas.sh
[2025-06-05 08:55:14] -rw-r--r--. 2 boinc boinc    508875 Jun  5 03:44 input.tar.gz
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc 200715104 Jun  5 08:53 HITS.pool.root.1
[2025-06-05 08:55:14] -rw-------. 1 boinc boinc   2017280 Jun  5 08:55 result.tar.gz
08:55:16 (698): run_atlas exited; CPU time 71451.130619
08:55:16 (698): called boinc_finish(0)

</stderr_txt>
]]>

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