Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:01:48 (2572381): wrapper (7.7.26015): starting
17:01:48 (2572381): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 17:01:48] Arguments: --nthreads 8
[2025-06-04 17:01:48] Threads: 8
[2025-06-04 17:01:48] Checking for CVMFS
[2025-06-04 17:01:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:01:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:01:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:01:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:01:49] 2.12.6.0 5779 31919 461112 146768 -959 939 25367431 32935936 15492 16776704 3 91525696 99.645 88705207 10214 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 17:01:49] CVMFS is ok
[2025-06-04 17:01:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:01:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:01:49] Further information can be found at the LHC@home message board.
[2025-06-04 17:01:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:01:49] Checking for apptainer binary...
[2025-06-04 17:01:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:01:49] Running /usr/bin/apptainer --version
[2025-06-04 17:01:49] apptainer version 1.4.1-1.el9
[2025-06-04 17:01:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:01:49] c6-12-25-2.aglt2.org
[2025-06-04 17:01:49] apptainer works
[2025-06-04 17:01:49] Set ATHENA_PROC_NUMBER=8
[2025-06-04 17:01:49] Set ATHENA_CORE_NUMBER=8
[2025-06-04 17:01:49] Starting ATLAS job with PandaID=6680049119
[2025-06-04 17:01:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:10:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:10:56] 2025-06-05 00:10:40,662 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680049119/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:10:56] 2025-06-05 00:10:40,664 | INFO     | extracted standard info from prmon json
[2025-06-04 20:10:56] 2025-06-05 00:10:40,664 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:10:56] 2025-06-05 00:10:40,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:10:56] 2025-06-05 00:10:40,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:10:56] 2025-06-05 00:10:40,666 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:10:56] 2025-06-05 00:10:40,675 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:10:56] 2025-06-05 00:10:40,676 | INFO     | sum of square deviations: 1963274020.0
[2025-06-04 20:10:56] 2025-06-05 00:10:40,679 | INFO     | sum of deviations: 17680974439.999992
[2025-06-04 20:10:56] 2025-06-05 00:10:40,680 | INFO     | mean x: 1749076584.0
[2025-06-04 20:10:56] 2025-06-05 00:10:40,680 | INFO     | mean y: 2359481.9783783783
[2025-06-04 20:10:56] 2025-06-05 00:10:40,680 | INFO     | -- intersect: -15749582457.999262
[2025-06-04 20:10:56] 2025-06-05 00:10:40,680 | INFO     | intersect: -15749582457.999262
[2025-06-04 20:10:56] 2025-06-05 00:10:40,681 | INFO     | chi2: 2.9199866414571085
[2025-06-04 20:10:56] 2025-06-05 00:10:40,682 | INFO     | sum of square deviations: 1808350185.0
[2025-06-04 20:10:56] 2025-06-05 00:10:40,685 | INFO     | sum of deviations: 32616459172.0
[2025-06-04 20:10:56] 2025-06-05 00:10:40,685 | INFO     | mean x: 1749076431.5
[2025-06-04 20:10:56] 2025-06-05 00:10:40,686 | INFO     | mean y: 2373957.466666667
[2025-06-04 20:10:56] 2025-06-05 00:10:40,686 | INFO     | -- intersect: -31544989208.106934
[2025-06-04 20:10:56] 2025-06-05 00:10:40,686 | INFO     | intersect: -31544989208.106934
[2025-06-04 20:10:56] 2025-06-05 00:10:40,687 | INFO     | chi2: 2.133511554384065
[2025-06-04 20:10:56] 2025-06-05 00:10:40,687 | INFO     | current chi2=2.133511554384065 (change=26.93420154417498 %)
[2025-06-04 20:10:56] 2025-06-05 00:10:40,688 | INFO     | sum of square deviations: 1661798600.0
[2025-06-04 20:10:56] 2025-06-05 00:10:40,691 | INFO     | sum of deviations: 33120079442.0
[2025-06-04 20:10:56] 2025-06-05 00:10:40,691 | INFO     | mean x: 1749076279.0
[2025-06-04 20:10:56] 2025-06-05 00:10:40,691 | INFO     | mean y: 2374464.4342857143
[2025-06-04 20:10:56] 2025-06-05 00:10:40,692 | INFO     | -- intersect: -34857171879.2669
[2025-06-04 20:10:56] 2025-06-05 00:10:40,692 | INFO     | intersect: -34857171879.2669
[2025-06-04 20:10:56] 2025-06-05 00:10:40,693 | INFO     | chi2: 2.1295682639242677
[2025-06-04 20:10:56] 2025-06-05 00:10:40,693 | INFO     | current chi2=2.1295682639242677 (change=0.18482629970736406 %)
[2025-06-04 20:10:56] 2025-06-05 00:10:40,693 | INFO     | right removable region: 174
[2025-06-04 20:10:56] 2025-06-05 00:10:40,694 | INFO     | sum of square deviations: 1808350185.0
[2025-06-04 20:10:56] 2025-06-05 00:10:40,697 | INFO     | sum of deviations: -17599069099.500004
[2025-06-04 20:10:56] 2025-06-05 00:10:40,697 | INFO     | mean x: 1749076736.5
[2025-06-04 20:10:56] 2025-06-05 00:10:40,698 | INFO     | mean y: 2393979.6166666667
[2025-06-04 20:10:56] 2025-06-05 00:10:40,698 | INFO     | -- intersect: 17024607155.651186
[2025-06-04 20:10:56] 2025-06-05 00:10:40,698 | INFO     | intersect: 17024607155.651186
[2025-06-04 20:10:56] 2025-06-05 00:10:40,699 | INFO     | chi2: 1.104940757959822
[2025-06-04 20:10:56] 2025-06-05 00:10:40,699 | INFO     | current chi2=1.104940757959822 (change=62.159389968700566 %)
[2025-06-04 20:10:56] 2025-06-05 00:10:40,700 | INFO     | sum of square deviations: 1661798600.0
[2025-06-04 20:10:56] 2025-06-05 00:10:40,703 | INFO     | sum of deviations: -28276115375.0
[2025-06-04 20:10:56] 2025-06-05 00:10:40,703 | INFO     | mean x: 1749076889.0
[2025-06-04 20:10:56] 2025-06-05 00:10:40,704 | INFO     | mean y: 2405012.537142857
[2025-06-04 20:10:56] 2025-06-05 00:10:40,704 | INFO     | -- intersect: 29763592627.636875
[2025-06-04 20:10:56] 2025-06-05 00:10:40,704 | INFO     | intersect: 29763592627.636875
[2025-06-04 20:10:56] 2025-06-05 00:10:40,705 | INFO     | chi2: 0.9079647523325556
[2025-06-04 20:10:56] 2025-06-05 00:10:40,705 | INFO     | current chi2=0.9079647523325556 (change=17.826838607253993 %)
[2025-06-04 20:10:56] 2025-06-05 00:10:40,705 | INFO     | left removable region: 20
[2025-06-04 20:10:56] 2025-06-05 00:10:40,706 | INFO     | sum of square deviations: 1132458442.5
[2025-06-04 20:10:56] 2025-06-05 00:10:40,708 | INFO     | sum of deviations: -6377311337.499999
[2025-06-04 20:10:56] 2025-06-05 00:10:40,709 | INFO     | mean x: 1749076858.5
[2025-06-04 20:10:56] 2025-06-05 00:10:40,709 | INFO     | mean y: 2417683.798701299
[2025-06-04 20:10:56] 2025-06-05 00:10:40,709 | INFO     | -- intersect: 9852145727.899473
[2025-06-04 20:10:56] 2025-06-05 00:10:40,710 | INFO     | intersect: 9852145727.899473
[2025-06-04 20:10:56] 2025-06-05 00:10:40,710 | INFO     | chi2: 0.07361727870680859
[2025-06-04 20:10:56] 2025-06-05 00:10:40,711 | INFO     | -- intersect: 9852145727.899473
[2025-06-04 20:10:56] 2025-06-05 00:10:40,711 | INFO     | current memory leak: -5.63 B/s (using 154 data points, chi2=0.07)
[2025-06-04 20:10:56] 2025-06-05 00:10:40,712 | INFO     | ..............................
[2025-06-04 20:10:56] 2025-06-05 00:10:40,713 | INFO     | . Timing measurements:
[2025-06-04 20:10:56] 2025-06-05 00:10:40,713 | INFO     | . get job = 0 s
[2025-06-04 20:10:56] 2025-06-05 00:10:40,713 | INFO     | . initial setup = 4 s
[2025-06-04 20:10:56] 2025-06-05 00:10:40,713 | INFO     | . payload setup = 12 s
[2025-06-04 20:10:56] 2025-06-05 00:10:40,713 | INFO     | . stage-in = 0 s
[2025-06-04 20:10:56] 2025-06-05 00:10:40,714 | INFO     | . payload execution = 11260 s
[2025-06-04 20:10:56] 2025-06-05 00:10:40,714 | INFO     | . stage-out = 3 s
[2025-06-04 20:10:56] 2025-06-05 00:10:40,714 | INFO     | . log creation = 0 s
[2025-06-04 20:10:56] 2025-06-05 00:10:40,714 | INFO     | ..............................
[2025-06-04 20:10:56] 2025-06-05 00:10:41,046 | INFO     | 
[2025-06-04 20:10:56] 2025-06-05 00:10:41,047 | INFO     | job summary report
[2025-06-04 20:10:56] 2025-06-05 00:10:41,047 | INFO     | --------------------------------------------------
[2025-06-04 20:10:56] 2025-06-05 00:10:41,047 | INFO     | PanDA job id: 6680049119
[2025-06-04 20:10:56] 2025-06-05 00:10:41,048 | INFO     | task id: 45006595
[2025-06-04 20:10:56] 2025-06-05 00:10:41,048 | INFO     | errors: (none)
[2025-06-04 20:10:56] 2025-06-05 00:10:41,048 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:10:56] 2025-06-05 00:10:41,048 | INFO     | pilot state: finished 
[2025-06-04 20:10:56] 2025-06-05 00:10:41,049 | INFO     | transexitcode: 0
[2025-06-04 20:10:56] 2025-06-05 00:10:41,049 | INFO     | exeerrorcode: 0
[2025-06-04 20:10:56] 2025-06-05 00:10:41,049 | INFO     | exeerrordiag: 
[2025-06-04 20:10:56] 2025-06-05 00:10:41,049 | INFO     | exitcode: 0
[2025-06-04 20:10:56] 2025-06-05 00:10:41,049 | INFO     | exitmsg: OK
[2025-06-04 20:10:56] 2025-06-05 00:10:41,050 | INFO     | cpuconsumptiontime: 81498 s
[2025-06-04 20:10:56] 2025-06-05 00:10:41,050 | INFO     | nevents: 400
[2025-06-04 20:10:56] 2025-06-05 00:10:41,050 | INFO     | neventsw: 0
[2025-06-04 20:10:56] 2025-06-05 00:10:41,050 | INFO     | pid: 2586058
[2025-06-04 20:10:56] 2025-06-05 00:10:41,050 | INFO     | pgrp: 2586058
[2025-06-04 20:10:56] 2025-06-05 00:10:41,051 | INFO     | corecount: 8
[2025-06-04 20:10:56] 2025-06-05 00:10:41,051 | INFO     | event service: False
[2025-06-04 20:10:56] 2025-06-05 00:10:41,051 | INFO     | sizes: {0: 2397070, 1: 2397269, 10: 2397475, 12: 2397503, 11274: 2427060, 11278: 2436001, 11280: 2436185, 11290: 2436355}
[2025-06-04 20:10:56] 2025-06-05 00:10:41,051 | INFO     | --------------------------------------------------
[2025-06-04 20:10:56] 2025-06-05 00:10:41,051 | INFO     | 
[2025-06-04 20:10:56] 2025-06-05 00:10:41,052 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 20:10:56] 2025-06-05 00:10:41,088 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,089 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,089 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,089 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,091 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,091 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,091 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,091 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,091 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,092 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,092 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,092 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,092 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,092 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:10:56] 2025-06-05 00:10:41,093 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,093 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:10:56] 2025-06-05 00:10:41,093 | INFO     | job 6680049119 has completed (purged errors)
[2025-06-04 20:10:56] 2025-06-05 00:10:41,093 | INFO     | overall cleanup function is called
[2025-06-04 20:10:56] 2025-06-05 00:10:42,104 | INFO     | --- collectZombieJob: --- 10, [2586058]
[2025-06-04 20:10:56] 2025-06-05 00:10:42,104 | INFO     | zombie collector waiting for pid 2586058
[2025-06-04 20:10:56] 2025-06-05 00:10:42,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:10:56] 2025-06-05 00:10:42,105 | INFO     | collected zombie processes
[2025-06-04 20:10:56] 2025-06-05 00:10:42,105 | INFO     | will attempt to kill all subprocesses of pid=2586058
[2025-06-04 20:10:56] 2025-06-05 00:10:43,042 | INFO     | process IDs to be killed: [2586058] (in reverse order)
[2025-06-04 20:10:56] 2025-06-05 00:10:43,284 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:10:56] 2025-06-05 00:10:43,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:10:56] 2025-06-05 00:10:43,316 | INFO     | did not find any defunct processes belonging to 2586058
[2025-06-04 20:10:56] 2025-06-05 00:10:43,348 | INFO     | did not find any defunct processes belonging to 2586058
[2025-06-04 20:10:56] 2025-06-05 00:10:43,349 | INFO     | ready for new job
[2025-06-04 20:10:56] 2025-06-05 00:10:43,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:10:56] 2025-06-05 00:10:43,352 | INFO     | **************************************
[2025-06-04 20:10:56] 2025-06-05 00:10:43,353 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:10:56] 2025-06-05 00:10:43,353 | INFO     | **************************************
[2025-06-04 20:10:56] 2025-06-05 00:10:43,353 | INFO     | 
[2025-06-04 20:10:56] 2025-06-05 00:10:43,379 | INFO     | architecture information:
[2025-06-04 20:10:56] 2025-06-05 00:10:43,379 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:10:56] 2025-06-05 00:10:43,408 | INFO     | cat /etc/os-release:
[2025-06-04 20:10:56] NAME="CentOS Linux"
[2025-06-04 20:10:56] VERSION="7 (Core)"
[2025-06-04 20:10:56] ID="centos"
[2025-06-04 20:10:56] ID_LIKE="rhel fedora"
[2025-06-04 20:10:56] VERSION_ID="7"
[2025-06-04 20:10:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:10:56] ANSI_COLOR="0;31"
[2025-06-04 20:10:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:10:56] HOME_URL="https://www.centos.org/"
[2025-06-04 20:10:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:10:56] 
[2025-06-04 20:10:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:10:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:10:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:10:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:10:56] 
[2025-06-04 20:10:56] 2025-06-05 00:10:43,409 | INFO     | **************************************
[2025-06-04 20:10:56] 2025-06-05 00:10:43,912 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 20:10:56] 2025-06-05 00:10:43,943 | INFO     | sufficient remaining disk space (96047464448 B)
[2025-06-04 20:10:56] 2025-06-05 00:10:43,944 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:10:56] 2025-06-05 00:10:43,945 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:10:56] 2025-06-05 00:10:43,945 | INFO     | update_server=False
[2025-06-04 20:10:56] 2025-06-05 00:10:43,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:10:56] 2025-06-05 00:10:43,946 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 20:10:56] 2025-06-05 00:10:43,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:10:56] 2025-06-05 00:10:43,947 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:10:56] 2025-06-05 00:10:43,947 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:10:56] 2025-06-05 00:10:43,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:10:56] 2025-06-05 00:10:44,023 | INFO     | all payload control threads have been joined
[2025-06-04 20:10:56] 2025-06-05 00:10:44,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:10:56] 2025-06-05 00:10:44,108 | INFO     | aborting loop
[2025-06-04 20:10:56] 2025-06-05 00:10:44,329 | INFO     | all data control threads have been joined
[2025-06-04 20:10:56] 2025-06-05 00:10:44,951 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:44,958 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:45,029 | INFO     | [payload] control thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:45,071 | INFO     | [job] validate thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:45,113 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:45,252 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:45,334 | INFO     | [data] control thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:45,646 | INFO     | all job control threads have been joined
[2025-06-04 20:10:56] 2025-06-05 00:10:45,717 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:45,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:10:56] 2025-06-05 00:10:45,951 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:45,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:10:56] 2025-06-05 00:10:46,058 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:46,204 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:46,322 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:46,361 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:46,651 | INFO     | [job] control thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:46,981 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:49,812 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:10:56] 2025-06-05 00:10:51,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501682042688)>', '<ExcThread(monitor, started 140500887643904)>']
[2025-06-04 20:10:56] 2025-06-05 00:10:51,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:10:56] 2025-06-05 00:10:51,985 | INFO     | [monitor] control thread has ended
[2025-06-04 20:10:56] 2025-06-05 00:10:56,213 | INFO     | all workflow threads have been joined
[2025-06-04 20:10:56] 2025-06-05 00:10:56,213 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:10:56] 2025-06-05 00:10:56,214 | INFO     | traces error code: 0
[2025-06-04 20:10:56] 2025-06-05 00:10:56,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:10:56] 2025-06-05 00:10:56,462 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:10:56] 2025-06-05 00:10:56,467 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:10:56] 2025-06-05 00:10:56,471 [wrapper] pilotpid: 2576788
[2025-06-04 20:10:56] 2025-06-05 00:10:56,474 [wrapper] Pilot exit status: 0
[2025-06-04 20:10:56] 2025-06-05 00:10:56,490 [wrapper] pandaids: 6680049119
[2025-06-04 20:10:56] 2025-06-05 00:10:56,604 [wrapper] cleanup supervisor_pilot 3142213 2576789
[2025-06-04 20:10:56] 2025-06-05 00:10:56,610 [wrapper] Test setup, not cleaning
[2025-06-04 20:10:56] 2025-06-05 00:10:56,617 [wrapper] apfmon messages muted
[2025-06-04 20:10:56] 2025-06-05 00:10:56,622 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:10:56] 2025-06-05 00:10:56,628 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:10:56]  *** Error codes and diagnostics ***
[2025-06-04 20:10:56]     "exeErrorCode": 0,
[2025-06-04 20:10:56]     "exeErrorDiag": "",
[2025-06-04 20:10:56]     "pilotErrorCode": 0,
[2025-06-04 20:10:56]     "pilotErrorDiag": "",
[2025-06-04 20:10:56]  *** Listing of results directory ***
[2025-06-04 20:10:56] total 390716
[2025-06-04 20:10:56] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 16:38 pilot3.tar.gz
[2025-06-04 20:10:56] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 17:01 queuedata.json
[2025-06-04 20:10:56] -rwx------. 1 boincer umatlas     37140 Jun  4 17:01 runpilot2-wrapper.sh
[2025-06-04 20:10:56] -rw-r--r--. 1 boincer umatlas       100 Jun  4 17:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:10:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 17:01 run_atlas
[2025-06-04 20:10:56] -rw-r--r--. 1 boincer umatlas       105 Jun  4 17:01 job.xml
[2025-06-04 20:10:56] -rw-r--r--. 2 boincer umatlas 213267790 Jun  4 17:01 EVNT.45006593._001767.pool.root.1
[2025-06-04 20:10:56] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 17:01 shared
[2025-06-04 20:10:56] -rw-r--r--. 2 boincer umatlas    508890 Jun  4 17:01 input.tar.gz
[2025-06-04 20:10:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 17:01 start_atlas.sh
[2025-06-04 20:10:56] -rw-r--r--. 1 boincer umatlas         0 Jun  4 17:01 boinc_lockfile
[2025-06-04 20:10:56] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 17:01 pandaJob.out
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas    986745 Jun  4 17:02 agis_schedconf.cvmfs.json
[2025-06-04 20:10:56] drwx------. 4 boincer umatlas      4096 Jun  4 17:02 pilot3
[2025-06-04 20:10:56] -rw-r--r--. 1 boincer umatlas      6859 Jun  4 20:01 init_data.xml
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas 180252315 Jun  4 20:09 HITS.45006595._056930.pool.root.1
[2025-06-04 20:10:56] -rw-r--r--. 1 boincer umatlas       530 Jun  4 20:09 boinc_task_state.xml
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas      1067 Jun  4 20:10 memory_monitor_summary.json
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas   1598969 Jun  4 20:10 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas    364178 Jun  4 20:10 log.45006595._056930.job.log.tgz.1
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas        95 Jun  4 20:10 pilot_heartbeat.json
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas      7724 Jun  4 20:10 heartbeat.json
[2025-06-04 20:10:56] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 20:10 boinc_mmap_file
[2025-06-04 20:10:56] -rw-r--r--. 1 boincer umatlas        28 Jun  4 20:10 wrapper_checkpoint.txt
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas      4476 Jun  4 20:10 pilotlog.txt
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas   1008655 Jun  4 20:10 log.45006595._056930.job.log.1
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas       357 Jun  4 20:10 output.list
[2025-06-04 20:10:56] -rw-r--r--. 1 boincer umatlas       620 Jun  4 20:10 runtime_log
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas   1392640 Jun  4 20:10 result.tar.gz
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas       655 Jun  4 20:10 RYAODmjPAh7n9Rq4apOajLDm4fhM0noT9bVof3QYDmH4aKDmY8qT4m.diag
[2025-06-04 20:10:56] -rw-r--r--. 1 boincer umatlas      8670 Jun  4 20:10 runtime_log.err
[2025-06-04 20:10:56] -rw-r--r--. 1 boincer umatlas     20877 Jun  4 20:10 stderr.txt
[2025-06-04 20:10:56] HITS file was successfully produced:
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas 180252315 Jun  4 20:09 shared/HITS.pool.root.1
[2025-06-04 20:10:56]  *** Contents of shared directory: ***
[2025-06-04 20:10:56] total 386180
[2025-06-04 20:10:56] -rw-r--r--. 2 boincer umatlas 213267790 Jun  4 17:01 ATLAS.root_0
[2025-06-04 20:10:56] -rw-r--r--. 2 boincer umatlas    508890 Jun  4 17:01 input.tar.gz
[2025-06-04 20:10:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 17:01 start_atlas.sh
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas 180252315 Jun  4 20:09 HITS.pool.root.1
[2025-06-04 20:10:56] -rw-------. 1 boincer umatlas   1392640 Jun  4 20:10 result.tar.gz
20:10:57 (2572381): run_atlas exited; CPU time 82685.414743
20:10:57 (2572381): called boinc_finish(0)

</stderr_txt>
]]>

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