Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:57:03 (32672): wrapper (7.7.26015): starting
16:57:03 (32672): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 16:57:03] Arguments: --nthreads 8
[2025-06-04 16:57:03] Threads: 8
[2025-06-04 16:57:03] Checking for CVMFS
[2025-06-04 16:57:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:57:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:57:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:57:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:57:04] 2.11.2.0 2843 36190 76212 146793 1 1 14076871 20275200 1 130560 0 12342937 99.979 7034572 8013 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 16:57:04] CVMFS is ok
[2025-06-04 16:57:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:57:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:57:04] Further information can be found at the LHC@home message board.
[2025-06-04 16:57:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:57:04] Checking for apptainer binary...
[2025-06-04 16:57:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:57:04] Running /usr/bin/apptainer --version
[2025-06-04 16:57:04] apptainer version 1.3.2-1.el7
[2025-06-04 16:57:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:57:06] c-204-23.aglt2.org
[2025-06-04 16:57:06] apptainer works
[2025-06-04 16:57:06] Set ATHENA_PROC_NUMBER=8
[2025-06-04 16:57:06] Set ATHENA_CORE_NUMBER=8
[2025-06-04 16:57:06] Starting ATLAS job with PandaID=6667102157
[2025-06-04 16:57:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:12:44 (13638): wrapper (7.7.26015): starting
19:12:44 (13638): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 19:12:44] Arguments: --nthreads 8
[2025-06-04 19:12:44] Threads: 8
[2025-06-04 19:12:44] This job has been restarted, cleaning up previous attempt
[2025-06-04 19:12:44] Checking for CVMFS
[2025-06-04 19:12:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:12:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:12:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:12:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:12:45] 2.11.2.0 2843 36326 75384 146797 2 38 14241156 20275201 1 130560 0 12424698 99.979 7107330 8083 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 19:12:45] CVMFS is ok
[2025-06-04 19:12:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:12:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:12:45] Further information can be found at the LHC@home message board.
[2025-06-04 19:12:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:12:45] Checking for apptainer binary...
[2025-06-04 19:12:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:12:45] Running /usr/bin/apptainer --version
[2025-06-04 19:12:45] apptainer version 1.3.2-1.el7
[2025-06-04 19:12:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:12:47] c-204-23.aglt2.org
[2025-06-04 19:12:47] apptainer works
[2025-06-04 19:12:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 19:12:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 19:12:47] Starting ATLAS job with PandaID=6667102157
[2025-06-04 19:12:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:51:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:51:12] 2025-06-05 01:50:47,610 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 21:51:12] 2025-06-05 01:50:48,750 | WARNING  | process 23858 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 21:51:12] 2025-06-05 01:50:48,751 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667102157/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:51:12] 2025-06-05 01:50:48,840 | INFO     | number of running child processes to parent process 23858: 1
[2025-06-04 21:51:12] 2025-06-05 01:50:48,840 | INFO     | maximum number of monitored processes: 6
[2025-06-04 21:51:12] 2025-06-05 01:50:51,343 | INFO     | monitor loop #695: job 0:6667102157 is in state 'finished'
[2025-06-04 21:51:12] 2025-06-05 01:50:51,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:51:12] 2025-06-05 01:50:53,168 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 21:51:12] 2025-06-05 01:50:53,169 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667102157/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:51:12] 2025-06-05 01:50:53,169 | INFO     | extracted standard info from prmon json
[2025-06-04 21:51:12] 2025-06-05 01:50:53,170 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:51:12] 2025-06-05 01:50:53,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:51:12] 2025-06-05 01:50:53,170 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:51:12] 2025-06-05 01:50:53,171 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:51:12] 2025-06-05 01:50:53,174 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:51:12] 2025-06-05 01:50:53,174 | INFO     | sum of square deviations: 1154663510.0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,175 | INFO     | sum of deviations: 19389967642.0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,175 | INFO     | mean x: 1749083513.0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,175 | INFO     | mean y: 2488989.0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,175 | INFO     | -- intersect: -29369421031.977184
[2025-06-04 21:51:12] 2025-06-05 01:50:53,175 | INFO     | intersect: -29369421031.977184
[2025-06-04 21:51:12] 2025-06-05 01:50:53,176 | INFO     | chi2: 1.5895583722075253
[2025-06-04 21:51:12] 2025-06-05 01:50:53,176 | INFO     | sum of square deviations: 1046484737.5
[2025-06-04 21:51:12] 2025-06-05 01:50:53,177 | INFO     | sum of deviations: 18923389317.000004
[2025-06-04 21:51:12] 2025-06-05 01:50:53,177 | INFO     | mean x: 1749083360.5
[2025-06-04 21:51:12] 2025-06-05 01:50:53,177 | INFO     | mean y: 2488331.04
[2025-06-04 21:51:12] 2025-06-05 01:50:53,177 | INFO     | -- intersect: -31625861507.772785
[2025-06-04 21:51:12] 2025-06-05 01:50:53,177 | INFO     | intersect: -31625861507.772785
[2025-06-04 21:51:12] 2025-06-05 01:50:53,177 | INFO     | chi2: 1.591058928757923
[2025-06-04 21:51:12] 2025-06-05 01:50:53,178 | INFO     | current chi2=1.591058928757923 (change=-0.09440084596037214 %)
[2025-06-04 21:51:12] 2025-06-05 01:50:53,178 | INFO     | right removable region: 149
[2025-06-04 21:51:12] 2025-06-05 01:50:53,178 | INFO     | sum of square deviations: 1046484737.5
[2025-06-04 21:51:12] 2025-06-05 01:50:53,179 | INFO     | sum of deviations: -7373324187.0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,179 | INFO     | mean x: 1749083665.5
[2025-06-04 21:51:12] 2025-06-05 01:50:53,179 | INFO     | mean y: 2526287.1733333333
[2025-06-04 21:51:12] 2025-06-05 01:50:53,179 | INFO     | -- intersect: 12326223359.647617
[2025-06-04 21:51:12] 2025-06-05 01:50:53,179 | INFO     | intersect: 12326223359.647617
[2025-06-04 21:51:12] 2025-06-05 01:50:53,180 | INFO     | chi2: 0.01604174872456593
[2025-06-04 21:51:12] 2025-06-05 01:50:53,180 | INFO     | current chi2=0.01604174872456593 (change=98.99080467851661 %)
[2025-06-04 21:51:12] 2025-06-05 01:50:53,180 | INFO     | sum of square deviations: 945282840.0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,181 | INFO     | sum of deviations: -8072038683.0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,181 | INFO     | mean x: 1749083818.0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,181 | INFO     | mean y: 2527323.4620689657
[2025-06-04 21:51:12] 2025-06-05 01:50:53,181 | INFO     | -- intersect: 14938450881.225302
[2025-06-04 21:51:12] 2025-06-05 01:50:53,181 | INFO     | intersect: 14938450881.225302
[2025-06-04 21:51:12] 2025-06-05 01:50:53,181 | INFO     | chi2: 0.012098112943258549
[2025-06-04 21:51:12] 2025-06-05 01:50:53,182 | INFO     | current chi2=0.012098112943258549 (change=24.583577819469248 %)
[2025-06-04 21:51:12] 2025-06-05 01:50:53,182 | INFO     | left removable region: 20
[2025-06-04 21:51:12] 2025-06-05 01:50:53,182 | INFO     | sum of square deviations: 665612480.0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,183 | INFO     | sum of deviations: -7060720232.000001
[2025-06-04 21:51:12] 2025-06-05 01:50:53,183 | INFO     | mean x: 1749083940.0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,183 | INFO     | mean y: 2527160.6821705424
[2025-06-04 21:51:12] 2025-06-05 01:50:53,183 | INFO     | -- intersect: 18556554817.471714
[2025-06-04 21:51:12] 2025-06-05 01:50:53,183 | INFO     | intersect: 18556554817.471714
[2025-06-04 21:51:12] 2025-06-05 01:50:53,183 | INFO     | chi2: 0.01053578217690852
[2025-06-04 21:51:12] 2025-06-05 01:50:53,184 | INFO     | -- intersect: 18556554817.471714
[2025-06-04 21:51:12] 2025-06-05 01:50:53,184 | INFO     | current memory leak: -10.61 B/s (using 129 data points, chi2=0.01)
[2025-06-04 21:51:12] 2025-06-05 01:50:53,184 | INFO     | ..............................
[2025-06-04 21:51:12] 2025-06-05 01:50:53,184 | INFO     | . Timing measurements:
[2025-06-04 21:51:12] 2025-06-05 01:50:53,184 | INFO     | . get job = 0 s
[2025-06-04 21:51:12] 2025-06-05 01:50:53,184 | INFO     | . initial setup = 1 s
[2025-06-04 21:51:12] 2025-06-05 01:50:53,185 | INFO     | . payload setup = 11 s
[2025-06-04 21:51:12] 2025-06-05 01:50:53,185 | INFO     | . stage-in = 0 s
[2025-06-04 21:51:12] 2025-06-05 01:50:53,185 | INFO     | . payload execution = 9430 s
[2025-06-04 21:51:12] 2025-06-05 01:50:53,185 | INFO     | . stage-out = 2 s
[2025-06-04 21:51:12] 2025-06-05 01:50:53,185 | INFO     | . log creation = 0 s
[2025-06-04 21:51:12] 2025-06-05 01:50:53,185 | INFO     | ..............................
[2025-06-04 21:51:12] 2025-06-05 01:50:53,279 | INFO     | 
[2025-06-04 21:51:12] 2025-06-05 01:50:53,279 | INFO     | job summary report
[2025-06-04 21:51:12] 2025-06-05 01:50:53,279 | INFO     | --------------------------------------------------
[2025-06-04 21:51:12] 2025-06-05 01:50:53,280 | INFO     | PanDA job id: 6667102157
[2025-06-04 21:51:12] 2025-06-05 01:50:53,280 | INFO     | task id: 44871837
[2025-06-04 21:51:12] 2025-06-05 01:50:53,280 | INFO     | errors: (none)
[2025-06-04 21:51:12] 2025-06-05 01:50:53,280 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:51:12] 2025-06-05 01:50:53,280 | INFO     | pilot state: finished 
[2025-06-04 21:51:12] 2025-06-05 01:50:53,280 | INFO     | transexitcode: 0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,280 | INFO     | exeerrorcode: 0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,281 | INFO     | exeerrordiag: 
[2025-06-04 21:51:12] 2025-06-05 01:50:53,281 | INFO     | exitcode: 0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,281 | INFO     | exitmsg: OK
[2025-06-04 21:51:12] 2025-06-05 01:50:53,281 | INFO     | cpuconsumptiontime: 71934 s
[2025-06-04 21:51:12] 2025-06-05 01:50:53,281 | INFO     | nevents: 400
[2025-06-04 21:51:12] 2025-06-05 01:50:53,281 | INFO     | neventsw: 0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,281 | INFO     | pid: 23858
[2025-06-04 21:51:12] 2025-06-05 01:50:53,281 | INFO     | pgrp: 23858
[2025-06-04 21:51:12] 2025-06-05 01:50:53,282 | INFO     | corecount: 8
[2025-06-04 21:51:12] 2025-06-05 01:50:53,282 | INFO     | event service: False
[2025-06-04 21:51:12] 2025-06-05 01:50:53,282 | INFO     | sizes: {0: 2397164, 1: 2397363, 6: 2397569, 11: 2397597, 9446: 2425771, 9449: 2434896, 9454: 2435010}
[2025-06-04 21:51:12] 2025-06-05 01:50:53,282 | INFO     | --------------------------------------------------
[2025-06-04 21:51:12] 2025-06-05 01:50:53,282 | INFO     | 
[2025-06-04 21:51:12] 2025-06-05 01:50:53,282 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 21:51:12] 2025-06-05 01:50:53,312 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,313 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,313 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,313 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,314 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,315 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,316 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:51:12] 2025-06-05 01:50:53,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,316 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:51:12] 2025-06-05 01:50:53,316 | INFO     | job 6667102157 has completed (purged errors)
[2025-06-04 21:51:12] 2025-06-05 01:50:53,316 | INFO     | overall cleanup function is called
[2025-06-04 21:51:12] 2025-06-05 01:50:54,325 | INFO     | --- collectZombieJob: --- 10, [23858]
[2025-06-04 21:51:12] 2025-06-05 01:50:54,325 | INFO     | zombie collector waiting for pid 23858
[2025-06-04 21:51:12] 2025-06-05 01:50:54,325 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:51:12] 2025-06-05 01:50:54,326 | INFO     | collected zombie processes
[2025-06-04 21:51:12] 2025-06-05 01:50:54,326 | INFO     | will attempt to kill all subprocesses of pid=23858
[2025-06-04 21:51:12] 2025-06-05 01:50:54,421 | INFO     | process IDs to be killed: [23858] (in reverse order)
[2025-06-04 21:51:12] 2025-06-05 01:50:54,484 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:51:12] 2025-06-05 01:50:54,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:51:12] 2025-06-05 01:50:54,490 | INFO     | did not find any defunct processes belonging to 23858
[2025-06-04 21:51:12] 2025-06-05 01:50:54,494 | INFO     | did not find any defunct processes belonging to 23858
[2025-06-04 21:51:12] 2025-06-05 01:50:54,494 | INFO     | ready for new job
[2025-06-04 21:51:12] 2025-06-05 01:50:54,494 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:51:12] 2025-06-05 01:50:54,497 | INFO     | **************************************
[2025-06-04 21:51:12] 2025-06-05 01:50:54,498 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:51:12] 2025-06-05 01:50:54,498 | INFO     | **************************************
[2025-06-04 21:51:12] 2025-06-05 01:50:54,498 | INFO     | 
[2025-06-04 21:51:12] 2025-06-05 01:50:54,499 | INFO     | architecture information:
[2025-06-04 21:51:12] 2025-06-05 01:50:54,499 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:51:12] 2025-06-05 01:50:54,519 | INFO     | cat /etc/os-release:
[2025-06-04 21:51:12] NAME="CentOS Linux"
[2025-06-04 21:51:12] VERSION="7 (Core)"
[2025-06-04 21:51:12] ID="centos"
[2025-06-04 21:51:12] ID_LIKE="rhel fedora"
[2025-06-04 21:51:12] VERSION_ID="7"
[2025-06-04 21:51:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:51:12] ANSI_COLOR="0;31"
[2025-06-04 21:51:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:51:12] HOME_URL="https://www.centos.org/"
[2025-06-04 21:51:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:51:12] 
[2025-06-04 21:51:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:51:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:51:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:51:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:51:12] 
[2025-06-04 21:51:12] 2025-06-05 01:50:54,519 | INFO     | **************************************
[2025-06-04 21:51:12] 2025-06-05 01:50:55,023 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 21:51:12] 2025-06-05 01:50:55,044 | INFO     | sufficient remaining disk space (18577620992 B)
[2025-06-04 21:51:12] 2025-06-05 01:50:55,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:51:12] 2025-06-05 01:50:55,045 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:51:12] 2025-06-05 01:50:55,045 | INFO     | update_server=False
[2025-06-04 21:51:12] 2025-06-05 01:50:55,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:51:12] 2025-06-05 01:50:55,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:51:12] 2025-06-05 01:50:55,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:51:12] 2025-06-05 01:50:55,047 | INFO     | aborting loop
[2025-06-04 21:51:12] 2025-06-05 01:50:55,430 | INFO     | all data control threads have been joined
[2025-06-04 21:51:12] 2025-06-05 01:50:55,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:51:12] 2025-06-05 01:50:55,649 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:51:12] 2025-06-05 01:50:55,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:51:12] 2025-06-05 01:50:55,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:51:12] 2025-06-05 01:50:55,910 | INFO     | all job control threads have been joined
[2025-06-04 21:51:12] 2025-06-05 01:50:56,051 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:56,052 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:56,052 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:56,435 | INFO     | [data] control thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:56,513 | INFO     | all payload control threads have been joined
[2025-06-04 21:51:12] 2025-06-05 01:50:56,598 | INFO     | [job] validate thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:56,610 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:56,658 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:56,892 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:56,892 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:56,894 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:56,916 | INFO     | [job] control thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:57,410 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:57,498 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:57,519 | INFO     | [payload] control thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:50:58,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:51:12] 2025-06-05 01:51:02,089 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:51:06,027 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:51:12] 2025-06-05 01:51:07,033 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:51:12] 2025-06-05 01:51:07,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280777631552)>', '<ExcThread(monitor, started 140280158197504)>']
[2025-06-04 21:51:12] 2025-06-05 01:51:07,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:51:12] 2025-06-05 01:51:07,712 | INFO     | [monitor] control thread has ended
[2025-06-04 21:51:12] 2025-06-05 01:51:12,535 | INFO     | all workflow threads have been joined
[2025-06-04 21:51:12] 2025-06-05 01:51:12,536 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:51:12] 2025-06-05 01:51:12,537 | INFO     | traces error code: 0
[2025-06-04 21:51:12] 2025-06-05 01:51:12,537 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:51:12] 2025-06-05 01:51:12,672 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:51:12] 2025-06-05 01:51:12,676 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:51:12] 2025-06-05 01:51:12,681 [wrapper] pilotpid: 17333
[2025-06-04 21:51:12] 2025-06-05 01:51:12,685 [wrapper] Pilot exit status: 0
[2025-06-04 21:51:12] 2025-06-05 01:51:12,704 [wrapper] pandaids: 6667102157 6667102157
[2025-06-04 21:51:12] 2025-06-05 01:51:12,750 [wrapper] cleanup supervisor_pilot  2609 17334
[2025-06-04 21:51:12] 2025-06-05 01:51:12,754 [wrapper] Test setup, not cleaning
[2025-06-04 21:51:12] 2025-06-05 01:51:12,759 [wrapper] apfmon messages muted
[2025-06-04 21:51:12] 2025-06-05 01:51:12,764 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:51:12] 2025-06-05 01:51:12,768 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:51:12]  *** Error codes and diagnostics ***
[2025-06-04 21:51:12]     "exeErrorCode": 0,
[2025-06-04 21:51:12]     "exeErrorDiag": "",
[2025-06-04 21:51:12]     "pilotErrorCode": 0,
[2025-06-04 21:51:12]     "pilotErrorDiag": "",
[2025-06-04 21:51:12]  *** Listing of results directory ***
[2025-06-04 21:51:12] total 633388
[2025-06-04 21:51:12] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-04 21:51:12] -rw-r--r-- 1 boincer umatlas    495897 May 27 09:43 pilot3.tar.gz
[2025-06-04 21:51:12] -rw-r--r-- 1 boincer umatlas      5111 May 27 10:25 queuedata.json
[2025-06-04 21:51:12] -rwx------ 1 boincer umatlas     37140 May 27 10:25 runpilot2-wrapper.sh
[2025-06-04 21:51:12] -rw-r--r-- 1 boincer umatlas       100 Jun  4 16:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:51:12] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 16:57 run_atlas
[2025-06-04 21:51:12] -rw-r--r-- 1 boincer umatlas       105 Jun  4 16:57 job.xml
[2025-06-04 21:51:12] -rw-r--r-- 3 boincer umatlas 224929901 Jun  4 16:57 EVNT.44871834._002703.pool.root.1
[2025-06-04 21:51:12] -rw-r--r-- 3 boincer umatlas 224929901 Jun  4 16:57 ATLAS.root_0
[2025-06-04 21:51:12] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 16:57 start_atlas.sh
[2025-06-04 21:51:12] drwxrwx--x 2 boincer umatlas      4096 Jun  4 16:57 shared
[2025-06-04 21:51:12] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 16:57 input.tar.gz
[2025-06-04 21:51:12] -rw-r--r-- 1 boincer umatlas         0 Jun  4 16:57 boinc_lockfile
[2025-06-04 21:51:12] -rw-r--r-- 1 boincer umatlas      2555 Jun  4 19:12 pandaJob.out
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas    987032 Jun  4 19:13 agis_schedconf.cvmfs.json
[2025-06-04 21:51:12] -rw-r--r-- 1 boincer umatlas      5907 Jun  4 21:47 init_data.xml
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas 192515451 Jun  4 21:50 HITS.44871837._068721.pool.root.1
[2025-06-04 21:51:12] -rw-r--r-- 1 boincer umatlas       531 Jun  4 21:50 boinc_task_state.xml
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas        96 Jun  4 21:50 pilot_heartbeat.json
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas      1049 Jun  4 21:50 memory_monitor_summary.json
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas   1598969 Jun  4 21:50 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas    333253 Jun  4 21:50 log.44871837._068721.job.log.tgz.1
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas      7746 Jun  4 21:50 heartbeat.json
[2025-06-04 21:51:12] -rw-r--r-- 1 boincer umatlas        29 Jun  4 21:51 wrapper_checkpoint.txt
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas      4425 Jun  4 21:51 pilotlog.txt
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas    853445 Jun  4 21:51 log.44871837._068721.job.log.1
[2025-06-04 21:51:12] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 21:51 boinc_mmap_file
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas       357 Jun  4 21:51 output.list
[2025-06-04 21:51:12] -rw-r--r-- 1 boincer umatlas       620 Jun  4 21:51 runtime_log
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas   1208320 Jun  4 21:51 result.tar.gz
[2025-06-04 21:51:12] -rw-r--r-- 1 boincer umatlas      8744 Jun  4 21:51 runtime_log.err
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas       786 Jun  4 21:51 PdmMDmQQAe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfvRKDm7XV40n.diag
[2025-06-04 21:51:12] -rw-r--r-- 1 boincer umatlas     23254 Jun  4 21:51 stderr.txt
[2025-06-04 21:51:12] HITS file was successfully produced:
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas 192515451 Jun  4 21:50 shared/HITS.pool.root.1
[2025-06-04 21:51:12]  *** Contents of shared directory: ***
[2025-06-04 21:51:12] total 409368
[2025-06-04 21:51:12] -rw-r--r-- 3 boincer umatlas 224929901 Jun  4 16:57 ATLAS.root_0
[2025-06-04 21:51:12] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 16:57 start_atlas.sh
[2025-06-04 21:51:12] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 16:57 input.tar.gz
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas 192515451 Jun  4 21:50 HITS.pool.root.1
[2025-06-04 21:51:12] -rw------- 1 boincer umatlas   1208320 Jun  4 21:51 result.tar.gz
21:51:14 (13638): run_atlas exited; CPU time 71867.952152
21:51:14 (13638): called boinc_finish(0)

</stderr_txt>
]]>

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