Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:28:37 (1639943): wrapper (7.7.26015): starting
10:28:37 (1639943): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 10:28:37] Arguments: --nthreads 12
[2025-06-06 10:28:37] Threads: 12
[2025-06-06 10:28:37] Checking for CVMFS
[2025-06-06 10:28:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 10:28:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 10:28:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 10:28:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 10:28:40] 2.12.7.0 16265 4498 66784 146849 3 56 3061894 4096000 912 130560 0 4416193 99.992 1029626 146 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 10:28:40] CVMFS is ok
[2025-06-06 10:28:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 10:28:40] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 10:28:40] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 10:28:40] Further information can be found at the LHC@home message board.
[2025-06-06 10:28:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 10:28:40] Checking for apptainer binary...
[2025-06-06 10:28:41] apptainer is not installed, using version from CVMFS
[2025-06-06 10:28:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 10:28:42] gg3250
[2025-06-06 10:28:42] apptainer works
[2025-06-06 10:28:42] Set ATHENA_PROC_NUMBER=12
[2025-06-06 10:28:42] Set ATHENA_CORE_NUMBER=12
[2025-06-06 10:28:42] Starting ATLAS job with PandaID=6680038136
[2025-06-06 10:28:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 13:36:45]  *** The last 200 lines of the pilot log: ***
[2025-06-06 13:36:45] 2025-06-06 13:36:23,556 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 13:36:45] 2025-06-06 13:36:23,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 13:36:45] 2025-06-06 13:36:23,556 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 13:36:45] 2025-06-06 13:36:23,556 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 13:36:45] 2025-06-06 13:36:23,563 | INFO     | fitting pss+swap vs Time
[2025-06-06 13:36:45] 2025-06-06 13:36:23,563 | INFO     | sum of square deviations: 1778377530.0
[2025-06-06 13:36:45] 2025-06-06 13:36:23,564 | INFO     | sum of deviations: 42324681518.0
[2025-06-06 13:36:45] 2025-06-06 13:36:23,564 | INFO     | mean x: 1749211433.0
[2025-06-06 13:36:45] 2025-06-06 13:36:23,564 | INFO     | mean y: 2609409.12849162
[2025-06-06 13:36:45] 2025-06-06 13:36:23,564 | INFO     | -- intersect: -41627930541.16508
[2025-06-06 13:36:45] 2025-06-06 13:36:23,564 | INFO     | intersect: -41627930541.16508
[2025-06-06 13:36:45] 2025-06-06 13:36:23,565 | INFO     | chi2: 2.7891669056280923
[2025-06-06 13:36:45] 2025-06-06 13:36:23,565 | INFO     | sum of square deviations: 1633472487.5
[2025-06-06 13:36:45] 2025-06-06 13:36:23,566 | INFO     | sum of deviations: 52900090813.50001
[2025-06-06 13:36:45] 2025-06-06 13:36:23,566 | INFO     | mean x: 1749211280.5
[2025-06-06 13:36:45] 2025-06-06 13:36:23,566 | INFO     | mean y: 2620249.4770114943
[2025-06-06 13:36:45] 2025-06-06 13:36:23,566 | INFO     | -- intersect: -56645677348.76988
[2025-06-06 13:36:45] 2025-06-06 13:36:23,566 | INFO     | intersect: -56645677348.76988
[2025-06-06 13:36:45] 2025-06-06 13:36:23,566 | INFO     | chi2: 2.083686373931253
[2025-06-06 13:36:45] 2025-06-06 13:36:23,566 | INFO     | current chi2=2.083686373931253 (change=25.29359323292171 %)
[2025-06-06 13:36:45] 2025-06-06 13:36:23,571 | INFO     | sum of square deviations: 1496660620.0
[2025-06-06 13:36:45] 2025-06-06 13:36:23,571 | INFO     | sum of deviations: 51097842550.0
[2025-06-06 13:36:45] 2025-06-06 13:36:23,571 | INFO     | mean x: 1749211128.0
[2025-06-06 13:36:45] 2025-06-06 13:36:23,571 | INFO     | mean y: 2618240.076923077
[2025-06-06 13:36:45] 2025-06-06 13:36:23,572 | INFO     | -- intersect: -59717610655.40368
[2025-06-06 13:36:45] 2025-06-06 13:36:23,572 | INFO     | intersect: -59717610655.40368
[2025-06-06 13:36:45] 2025-06-06 13:36:23,572 | INFO     | chi2: 2.083641805006395
[2025-06-06 13:36:45] 2025-06-06 13:36:23,572 | INFO     | current chi2=2.083641805006395 (change=0.0021389459285170997 %)
[2025-06-06 13:36:45] 2025-06-06 13:36:23,572 | INFO     | right removable region: 168
[2025-06-06 13:36:45] 2025-06-06 13:36:23,572 | INFO     | sum of square deviations: 1633472487.5
[2025-06-06 13:36:45] 2025-06-06 13:36:23,573 | INFO     | sum of deviations: 4526077847.5
[2025-06-06 13:36:45] 2025-06-06 13:36:23,573 | INFO     | mean x: 1749211585.5
[2025-06-06 13:36:45] 2025-06-06 13:36:23,573 | INFO     | mean y: 2648819.385057471
[2025-06-06 13:36:45] 2025-06-06 13:36:23,573 | INFO     | -- intersect: -4844122625.072407
[2025-06-06 13:36:45] 2025-06-06 13:36:23,573 | INFO     | intersect: -4844122625.072407
[2025-06-06 13:36:45] 2025-06-06 13:36:23,574 | INFO     | chi2: 0.8342023874723491
[2025-06-06 13:36:45] 2025-06-06 13:36:23,574 | INFO     | current chi2=0.8342023874723491 (change=70.091342121224 %)
[2025-06-06 13:36:45] 2025-06-06 13:36:23,574 | INFO     | sum of square deviations: 1496660620.0
[2025-06-06 13:36:45] 2025-06-06 13:36:23,579 | INFO     | sum of deviations: -5501482822.999998
[2025-06-06 13:36:45] 2025-06-06 13:36:23,579 | INFO     | mean x: 1749211738.0
[2025-06-06 13:36:45] 2025-06-06 13:36:23,579 | INFO     | mean y: 2660014.6863905326
[2025-06-06 13:36:45] 2025-06-06 13:36:23,579 | INFO     | -- intersect: 6432479976.406886
[2025-06-06 13:36:45] 2025-06-06 13:36:23,579 | INFO     | intersect: 6432479976.406886
[2025-06-06 13:36:45] 2025-06-06 13:36:23,579 | INFO     | chi2: 0.7341805073112225
[2025-06-06 13:36:45] 2025-06-06 13:36:23,580 | INFO     | current chi2=0.7341805073112225 (change=11.99012154163152 %)
[2025-06-06 13:36:45] 2025-06-06 13:36:23,580 | INFO     | left removable region: 20
[2025-06-06 13:36:45] 2025-06-06 13:36:23,580 | INFO     | sum of square deviations: 1005179777.0
[2025-06-06 13:36:45] 2025-06-06 13:36:23,580 | INFO     | sum of deviations: 2815865103.0000024
[2025-06-06 13:36:45] 2025-06-06 13:36:23,581 | INFO     | mean x: 1749211707.5
[2025-06-06 13:36:45] 2025-06-06 13:36:23,581 | INFO     | mean y: 2676005.2162162163
[2025-06-06 13:36:45] 2025-06-06 13:36:23,581 | INFO     | -- intersect: -4897486450.905599
[2025-06-06 13:36:45] 2025-06-06 13:36:23,581 | INFO     | intersect: -4897486450.905599
[2025-06-06 13:36:45] 2025-06-06 13:36:23,581 | INFO     | chi2: 0.002723634899381475
[2025-06-06 13:36:45] 2025-06-06 13:36:23,581 | INFO     | -- intersect: -4897486450.905599
[2025-06-06 13:36:45] 2025-06-06 13:36:23,581 | INFO     | current memory leak: 2.80 B/s (using 148 data points, chi2=0.00)
[2025-06-06 13:36:45] 2025-06-06 13:36:23,582 | INFO     | ..............................
[2025-06-06 13:36:45] 2025-06-06 13:36:23,582 | INFO     | . Timing measurements:
[2025-06-06 13:36:45] 2025-06-06 13:36:23,582 | INFO     | . get job = 0 s
[2025-06-06 13:36:45] 2025-06-06 13:36:23,582 | INFO     | . initial setup = 16 s
[2025-06-06 13:36:45] 2025-06-06 13:36:23,582 | INFO     | . payload setup = 67 s
[2025-06-06 13:36:45] 2025-06-06 13:36:23,582 | INFO     | . stage-in = 0 s
[2025-06-06 13:36:45] 2025-06-06 13:36:23,582 | INFO     | . payload execution = 10936 s
[2025-06-06 13:36:45] 2025-06-06 13:36:23,582 | INFO     | . stage-out = 2 s
[2025-06-06 13:36:45] 2025-06-06 13:36:23,582 | INFO     | . log creation = 0 s
[2025-06-06 13:36:45] 2025-06-06 13:36:23,582 | INFO     | ..............................
[2025-06-06 13:36:45] 2025-06-06 13:36:24,179 | INFO     | 
[2025-06-06 13:36:45] 2025-06-06 13:36:24,179 | INFO     | job summary report
[2025-06-06 13:36:45] 2025-06-06 13:36:24,179 | INFO     | --------------------------------------------------
[2025-06-06 13:36:45] 2025-06-06 13:36:24,179 | INFO     | PanDA job id: 6680038136
[2025-06-06 13:36:45] 2025-06-06 13:36:24,179 | INFO     | task id: 45006595
[2025-06-06 13:36:45] 2025-06-06 13:36:24,179 | INFO     | errors: (none)
[2025-06-06 13:36:45] 2025-06-06 13:36:24,179 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 13:36:45] 2025-06-06 13:36:24,179 | INFO     | pilot state: finished 
[2025-06-06 13:36:45] 2025-06-06 13:36:24,179 | INFO     | transexitcode: 0
[2025-06-06 13:36:45] 2025-06-06 13:36:24,179 | INFO     | exeerrorcode: 0
[2025-06-06 13:36:45] 2025-06-06 13:36:24,179 | INFO     | exeerrordiag: 
[2025-06-06 13:36:45] 2025-06-06 13:36:24,179 | INFO     | exitcode: 0
[2025-06-06 13:36:45] 2025-06-06 13:36:24,179 | INFO     | exitmsg: OK
[2025-06-06 13:36:45] 2025-06-06 13:36:24,180 | INFO     | cpuconsumptiontime: 36799 s
[2025-06-06 13:36:45] 2025-06-06 13:36:24,180 | INFO     | nevents: 400
[2025-06-06 13:36:45] 2025-06-06 13:36:24,180 | INFO     | neventsw: 0
[2025-06-06 13:36:45] 2025-06-06 13:36:24,180 | INFO     | pid: 1650020
[2025-06-06 13:36:45] 2025-06-06 13:36:24,180 | INFO     | pgrp: 1650020
[2025-06-06 13:36:45] 2025-06-06 13:36:24,180 | INFO     | corecount: 12
[2025-06-06 13:36:45] 2025-06-06 13:36:24,180 | INFO     | event service: False
[2025-06-06 13:36:45] 2025-06-06 13:36:24,180 | INFO     | sizes: {0: 2397087, 1: 2397171, 2: 2397370, 13: 2397370, 23: 2397426, 34: 2397454, 41: 2397816, 45: 2397844, 11008: 2426638, 11010: 2435625, 11012: 2435681, 11100:
[2025-06-06 13:36:45] 2025-06-06 13:36:24,180 | INFO     | --------------------------------------------------
[2025-06-06 13:36:45] 2025-06-06 13:36:24,180 | INFO     | 
[2025-06-06 13:36:45] 2025-06-06 13:36:24,180 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-06 13:36:45] 2025-06-06 13:36:24,255 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,255 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,255 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,256 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,256 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,256 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,256 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 13:36:45] 2025-06-06 13:36:24,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,256 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 13:36:45] 2025-06-06 13:36:24,256 | INFO     | job 6680038136 has completed (purged errors)
[2025-06-06 13:36:45] 2025-06-06 13:36:24,257 | INFO     | overall cleanup function is called
[2025-06-06 13:36:45] 2025-06-06 13:36:25,270 | INFO     | --- collectZombieJob: --- 10, [1650020]
[2025-06-06 13:36:45] 2025-06-06 13:36:25,271 | INFO     | zombie collector waiting for pid 1650020
[2025-06-06 13:36:45] 2025-06-06 13:36:25,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 13:36:45] 2025-06-06 13:36:25,271 | INFO     | collected zombie processes
[2025-06-06 13:36:45] 2025-06-06 13:36:25,271 | INFO     | will attempt to kill all subprocesses of pid=1650020
[2025-06-06 13:36:45] 2025-06-06 13:36:25,368 | INFO     | process IDs to be killed: [1650020] (in reverse order)
[2025-06-06 13:36:45] 2025-06-06 13:36:25,395 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 13:36:45] 2025-06-06 13:36:25,395 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 13:36:45] 2025-06-06 13:36:25,397 | INFO     | did not find any defunct processes belonging to 1650020
[2025-06-06 13:36:45] 2025-06-06 13:36:25,398 | INFO     | did not find any defunct processes belonging to 1650020
[2025-06-06 13:36:45] 2025-06-06 13:36:25,407 | INFO     | ready for new job
[2025-06-06 13:36:45] 2025-06-06 13:36:25,407 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 13:36:45] 2025-06-06 13:36:25,408 | INFO     | **************************************
[2025-06-06 13:36:45] 2025-06-06 13:36:25,408 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 13:36:45] 2025-06-06 13:36:25,408 | INFO     | **************************************
[2025-06-06 13:36:45] 2025-06-06 13:36:25,408 | INFO     | 
[2025-06-06 13:36:45] 2025-06-06 13:36:25,427 | INFO     | architecture information:
[2025-06-06 13:36:45] 2025-06-06 13:36:25,431 | INFO     | executing command: cat /etc/os-release
[2025-06-06 13:36:45] 2025-06-06 13:36:25,463 | INFO     | cat /etc/os-release:
[2025-06-06 13:36:45] NAME="CentOS Linux"
[2025-06-06 13:36:45] VERSION="7 (Core)"
[2025-06-06 13:36:45] ID="centos"
[2025-06-06 13:36:45] ID_LIKE="rhel fedora"
[2025-06-06 13:36:45] VERSION_ID="7"
[2025-06-06 13:36:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 13:36:45] ANSI_COLOR="0;31"
[2025-06-06 13:36:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 13:36:45] HOME_URL="https://www.centos.org/"
[2025-06-06 13:36:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 13:36:45] 
[2025-06-06 13:36:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 13:36:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 13:36:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 13:36:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 13:36:45] 
[2025-06-06 13:36:45] 2025-06-06 13:36:25,463 | INFO     | **************************************
[2025-06-06 13:36:45] 2025-06-06 13:36:25,967 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-06 13:36:45] 2025-06-06 13:36:25,991 | INFO     | sufficient remaining disk space (74373398528 B)
[2025-06-06 13:36:45] 2025-06-06 13:36:25,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 13:36:45] 2025-06-06 13:36:25,991 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 13:36:45] 2025-06-06 13:36:25,991 | INFO     | update_server=False
[2025-06-06 13:36:45] 2025-06-06 13:36:25,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 13:36:45] 2025-06-06 13:36:26,115 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 13:36:45] 2025-06-06 13:36:26,115 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 13:36:45] 2025-06-06 13:36:26,115 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 13:36:45] 2025-06-06 13:36:26,335 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 13:36:45] 2025-06-06 13:36:26,335 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 13:36:45] 2025-06-06 13:36:26,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:36:45] 2025-06-06 13:36:26,335 | INFO     | will abort loop
[2025-06-06 13:36:45] 2025-06-06 13:36:26,844 | INFO     | all data control threads have been joined
[2025-06-06 13:36:45] 2025-06-06 13:36:26,919 | INFO     | all payload control threads have been joined
[2025-06-06 13:36:45] 2025-06-06 13:36:26,999 | INFO     | [job] retrieve thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:27,087 | INFO     | [payload] failed_post thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:27,191 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:27,192 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:27,302 | INFO     | all job control threads have been joined
[2025-06-06 13:36:45] 2025-06-06 13:36:27,343 | INFO     | [job] job monitor thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:27,411 | INFO     | [payload] validate_post thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:27,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 13:36:45] 2025-06-06 13:36:27,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 13:36:45] 2025-06-06 13:36:27,847 | INFO     | [data] control thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:27,907 | INFO     | [job] validate thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:27,923 | INFO     | [payload] control thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:28,255 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:28,307 | INFO     | [job] control thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:28,475 | INFO     | [data] copytool_in thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:28,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:36:45] 2025-06-06 13:36:29,495 | INFO     | [data] copytool_out thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:29,791 | INFO     | [job] queue monitor thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:31,615 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:36,615 | INFO     | job.realtimelogging is not enabled
[2025-06-06 13:36:45] 2025-06-06 13:36:37,619 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 13:36:45] 2025-06-06 13:36:39,195 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140426786219840)>', '<ExcThread(monitor, started 140426346481408)>']
[2025-06-06 13:36:45] 2025-06-06 13:36:40,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 13:36:45] 2025-06-06 13:36:40,187 | INFO     | [monitor] control thread has ended
[2025-06-06 13:36:45] 2025-06-06 13:36:44,223 | INFO     | all workflow threads have been joined
[2025-06-06 13:36:45] 2025-06-06 13:36:44,223 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 13:36:45] 2025-06-06 13:36:44,223 | INFO     | traces error code: 0
[2025-06-06 13:36:45] 2025-06-06 13:36:44,223 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 13:36:45] 2025-06-06 13:36:44,579 [wrapper] ==== pilot stdout END ====
[2025-06-06 13:36:45] 2025-06-06 13:36:44,643 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 13:36:45] 2025-06-06 13:36:44,672 [wrapper] pilotpid: 1643552
[2025-06-06 13:36:45] 2025-06-06 13:36:44,704 [wrapper] Pilot exit status: 0
[2025-06-06 13:36:45] 2025-06-06 13:36:44,879 [wrapper] pandaids: 6680038136
[2025-06-06 13:36:45] 2025-06-06 13:36:45,011 [wrapper] cleanup supervisor_pilot 1699056 1643553
[2025-06-06 13:36:45] 2025-06-06 13:36:45,027 [wrapper] Test setup, not cleaning
[2025-06-06 13:36:45] 2025-06-06 13:36:45,051 [wrapper] apfmon messages muted
[2025-06-06 13:36:45] 2025-06-06 13:36:45,079 [wrapper] ==== wrapper stdout END ====
[2025-06-06 13:36:45] 2025-06-06 13:36:45,095 [wrapper] ==== wrapper stderr END ====
[2025-06-06 13:36:45]  *** Error codes and diagnostics ***
[2025-06-06 13:36:45]     "exeErrorCode": 0,
[2025-06-06 13:36:45]     "exeErrorDiag": "",
[2025-06-06 13:36:45]     "pilotErrorCode": 0,
[2025-06-06 13:36:45]     "pilotErrorDiag": "",
[2025-06-06 13:36:45]  *** Listing of results directory ***
[2025-06-06 13:36:45] total 397384
[2025-06-06 13:36:45] -rw-r--r-- 1 boinc boinc    495897 Jun  4 20:38 pilot3.tar.gz
[2025-06-06 13:36:45] -rwx------ 1 boinc boinc     37140 Jun  4 20:44 runpilot2-wrapper.sh
[2025-06-06 13:36:45] -rw-r--r-- 1 boinc boinc      5111 Jun  4 20:44 queuedata.json
[2025-06-06 13:36:45] -rw-rw-r-- 1 boinc boinc       100 Jun  6 10:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 13:36:45] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 10:28 run_atlas
[2025-06-06 13:36:45] -rw-rw-r-- 1 boinc boinc       105 Jun  6 10:28 job.xml
[2025-06-06 13:36:45] -rw-r--r-- 2 boinc boinc     15093 Jun  6 10:28 start_atlas.sh
[2025-06-06 13:36:45] drwxrwx--x 2 boinc boinc      4096 Jun  6 10:28 shared
[2025-06-06 13:36:45] -rw-r--r-- 2 boinc boinc    508876 Jun  6 10:28 input.tar.gz
[2025-06-06 13:36:45] -rw-rw-r-- 1 boinc boinc      9360 Jun  6 10:28 init_data.xml
[2025-06-06 13:36:45] -rw-r--r-- 2 boinc boinc 216328110 Jun  6 10:28 EVNT.45006593._002178.pool.root.1
[2025-06-06 13:36:45] -rw-rw-r-- 1 boinc boinc         0 Jun  6 10:28 boinc_lockfile
[2025-06-06 13:36:45] -rw-rw-r-- 1 boinc boinc      2524 Jun  6 10:28 pandaJob.out
[2025-06-06 13:36:45] -rw------- 1 boinc boinc    985686 Jun  6 10:29 agis_schedconf.cvmfs.json
[2025-06-06 13:36:45] drwx------ 4 boinc boinc      4096 Jun  6 10:30 pilot3
[2025-06-06 13:36:45] -rw------- 1 boinc boinc 183784740 Jun  6 13:34 HITS.45006595._056924.pool.root.1
[2025-06-06 13:36:45] -rw-rw-r-- 1 boinc boinc       530 Jun  6 13:34 boinc_task_state.xml
[2025-06-06 13:36:45] -rw------- 1 boinc boinc      1022 Jun  6 13:34 memory_monitor_summary.json
[2025-06-06 13:36:45] -rw------- 1 boinc boinc   1598969 Jun  6 13:34 agis_ddmendpoints.agis.ALL.json
[2025-06-06 13:36:45] -rw------- 1 boinc boinc    418737 Jun  6 13:34 log.45006595._056924.job.log.tgz.1
[2025-06-06 13:36:45] -rw------- 1 boinc boinc        95 Jun  6 13:35 pilot_heartbeat.json
[2025-06-06 13:36:45] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 13:36 boinc_mmap_file
[2025-06-06 13:36:45] -rw-rw-r-- 1 boinc boinc        28 Jun  6 13:36 wrapper_checkpoint.txt
[2025-06-06 13:36:45] -rw------- 1 boinc boinc      7667 Jun  6 13:36 heartbeat.json
[2025-06-06 13:36:45] -rw------- 1 boinc boinc      4634 Jun  6 13:36 pilotlog.txt
[2025-06-06 13:36:45] -rw------- 1 boinc boinc   1063768 Jun  6 13:36 log.45006595._056924.job.log.1
[2025-06-06 13:36:45] -rw------- 1 boinc boinc       357 Jun  6 13:36 output.list
[2025-06-06 13:36:45] -rw-rw-r-- 1 boinc boinc       620 Jun  6 13:36 runtime_log
[2025-06-06 13:36:45] -rw------- 1 boinc boinc   1505280 Jun  6 13:36 result.tar.gz
[2025-06-06 13:36:45] -rw-rw-r-- 1 boinc boinc      8954 Jun  6 13:36 runtime_log.err
[2025-06-06 13:36:45] -rw------- 1 boinc boinc       652 Jun  6 13:36 qJWMDmc99g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmw2nKDmKIvjCn.diag
[2025-06-06 13:36:45] -rw-rw-r-- 1 boinc boinc     20962 Jun  6 13:36 stderr.txt
[2025-06-06 13:36:46] HITS file was successfully produced:
[2025-06-06 13:36:46] -rw------- 1 boinc boinc 183784740 Jun  6 13:34 shared/HITS.pool.root.1
[2025-06-06 13:36:46]  *** Contents of shared directory: ***
[2025-06-06 13:36:46] total 392736
[2025-06-06 13:36:46] -rw-r--r-- 2 boinc boinc     15093 Jun  6 10:28 start_atlas.sh
[2025-06-06 13:36:46] -rw-r--r-- 2 boinc boinc    508876 Jun  6 10:28 input.tar.gz
[2025-06-06 13:36:46] -rw-r--r-- 2 boinc boinc 216328110 Jun  6 10:28 ATLAS.root_0
[2025-06-06 13:36:46] -rw------- 1 boinc boinc 183784740 Jun  6 13:34 HITS.pool.root.1
[2025-06-06 13:36:46] -rw------- 1 boinc boinc   1505280 Jun  6 13:36 result.tar.gz
13:36:47 (1639943): run_atlas exited; CPU time 36864.286703
13:36:47 (1639943): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN