Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:45:20 (42790): wrapper (7.7.26015): starting
16:45:20 (42790): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 16:45:20] Arguments: --nthreads 8
[2025-06-04 16:45:20] Threads: 8
[2025-06-04 16:45:20] Checking for CVMFS
[2025-06-04 16:45:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:45:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:45:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:45:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:45:21] 2.11.2.0 5089 29279 285092 146793 2 62 17392111 18432001 5443 130560 0 105213084 99.519 99135287 34478 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 16:45:21] CVMFS is ok
[2025-06-04 16:45:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:45:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:45:21] Further information can be found at the LHC@home message board.
[2025-06-04 16:45:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:45:21] Checking for apptainer binary...
[2025-06-04 16:45:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:45:21] Running /usr/bin/apptainer --version
[2025-06-04 16:45:21] apptainer version 1.3.2-1.el7
[2025-06-04 16:45:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:45:21] c-211-40.aglt2.org
[2025-06-04 16:45:21] apptainer works
[2025-06-04 16:45:21] Set ATHENA_PROC_NUMBER=8
[2025-06-04 16:45:21] Set ATHENA_CORE_NUMBER=8
[2025-06-04 16:45:21] Starting ATLAS job with PandaID=6667883275
[2025-06-04 16:45:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:07:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:07:55] 2025-06-04 23:07:40,143 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667883275/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:07:55] 2025-06-04 23:07:40,144 | INFO     | extracted standard info from prmon json
[2025-06-04 19:07:55] 2025-06-04 23:07:40,144 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:07:55] 2025-06-04 23:07:40,144 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:07:55] 2025-06-04 23:07:40,144 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:07:55] 2025-06-04 23:07:40,144 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:07:55] 2025-06-04 23:07:40,154 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:07:55] 2025-06-04 23:07:40,154 | INFO     | sum of square deviations: 850825255.0
[2025-06-04 19:07:55] 2025-06-04 23:07:40,155 | INFO     | sum of deviations: 1559575562.5
[2025-06-04 19:07:55] 2025-06-04 23:07:40,155 | INFO     | mean x: 1749074190.5
[2025-06-04 19:07:55] 2025-06-04 23:07:40,155 | INFO     | mean y: 2470829.1071428573
[2025-06-04 19:07:55] 2025-06-04 23:07:40,155 | INFO     | -- intersect: -3203608619.6079397
[2025-06-04 19:07:55] 2025-06-04 23:07:40,155 | INFO     | intersect: -3203608619.6079397
[2025-06-04 19:07:55] 2025-06-04 23:07:40,155 | INFO     | chi2: 1.9503946574151847
[2025-06-04 19:07:55] 2025-06-04 23:07:40,156 | INFO     | sum of square deviations: 762879420.0
[2025-06-04 19:07:55] 2025-06-04 23:07:40,156 | INFO     | sum of deviations: 10501265045.99999
[2025-06-04 19:07:55] 2025-06-04 23:07:40,156 | INFO     | mean x: 1749074038.0
[2025-06-04 19:07:55] 2025-06-04 23:07:40,156 | INFO     | mean y: 2485873.4962962964
[2025-06-04 19:07:55] 2025-06-04 23:07:40,156 | INFO     | -- intersect: -24074045196.27022
[2025-06-04 19:07:55] 2025-06-04 23:07:40,156 | INFO     | intersect: -24074045196.27022
[2025-06-04 19:07:55] 2025-06-04 23:07:40,157 | INFO     | chi2: 1.1827183042419929
[2025-06-04 19:07:55] 2025-06-04 23:07:40,157 | INFO     | current chi2=1.1827183042419929 (change=39.36005209276857 %)
[2025-06-04 19:07:55] 2025-06-04 23:07:40,157 | INFO     | sum of square deviations: 681212772.5
[2025-06-04 19:07:55] 2025-06-04 23:07:40,157 | INFO     | sum of deviations: 10087634965.000002
[2025-06-04 19:07:55] 2025-06-04 23:07:40,157 | INFO     | mean x: 1749073885.5
[2025-06-04 19:07:55] 2025-06-04 23:07:40,157 | INFO     | mean y: 2485100.7538461536
[2025-06-04 19:07:55] 2025-06-04 23:07:40,157 | INFO     | -- intersect: -25898407536.63165
[2025-06-04 19:07:55] 2025-06-04 23:07:40,157 | INFO     | intersect: -25898407536.63165
[2025-06-04 19:07:55] 2025-06-04 23:07:40,158 | INFO     | chi2: 1.1841117256807046
[2025-06-04 19:07:55] 2025-06-04 23:07:40,158 | INFO     | current chi2=1.1841117256807046 (change=-0.11781515798935159 %)
[2025-06-04 19:07:55] 2025-06-04 23:07:40,158 | INFO     | right removable region: 129
[2025-06-04 19:07:55] 2025-06-04 23:07:40,158 | INFO     | sum of square deviations: 762879420.0
[2025-06-04 19:07:55] 2025-06-04 23:07:40,158 | INFO     | sum of deviations: -14720417520.0
[2025-06-04 19:07:55] 2025-06-04 23:07:40,159 | INFO     | mean x: 1749074343.0
[2025-06-04 19:07:55] 2025-06-04 23:07:40,159 | INFO     | mean y: 2498494.762962963
[2025-06-04 19:07:55] 2025-06-04 23:07:40,159 | INFO     | -- intersect: 33752399104.848484
[2025-06-04 19:07:55] 2025-06-04 23:07:40,159 | INFO     | intersect: 33752399104.848484
[2025-06-04 19:07:55] 2025-06-04 23:07:40,159 | INFO     | chi2: 0.8074688743069809
[2025-06-04 19:07:55] 2025-06-04 23:07:40,159 | INFO     | current chi2=0.8074688743069809 (change=58.599718716564695 %)
[2025-06-04 19:07:55] 2025-06-04 23:07:40,159 | INFO     | sum of square deviations: 681212772.5
[2025-06-04 19:07:55] 2025-06-04 23:07:40,160 | INFO     | sum of deviations: -13696258233.5
[2025-06-04 19:07:55] 2025-06-04 23:07:40,160 | INFO     | mean x: 1749074495.5
[2025-06-04 19:07:55] 2025-06-04 23:07:40,160 | INFO     | mean y: 2496572.1
[2025-06-04 19:07:55] 2025-06-04 23:07:40,160 | INFO     | -- intersect: 35168860044.82354
[2025-06-04 19:07:55] 2025-06-04 23:07:40,160 | INFO     | intersect: 35168860044.82354
[2025-06-04 19:07:55] 2025-06-04 23:07:40,160 | INFO     | chi2: 0.8080498321727237
[2025-06-04 19:07:55] 2025-06-04 23:07:40,160 | INFO     | current chi2=0.8080498321727237 (change=-0.07194801982199907 %)
[2025-06-04 19:07:55] 2025-06-04 23:07:40,160 | INFO     | left removable region: 20
[2025-06-04 19:07:55] 2025-06-04 23:07:40,160 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 19:07:55] 2025-06-04 23:07:40,161 | INFO     | sum of deviations: -2266494284.0
[2025-06-04 19:07:55] 2025-06-04 23:07:40,161 | INFO     | mean x: 1749074465.0
[2025-06-04 19:07:55] 2025-06-04 23:07:40,161 | INFO     | mean y: 2508102.651376147
[2025-06-04 19:07:55] 2025-06-04 23:07:40,161 | INFO     | -- intersect: 9875335967.862436
[2025-06-04 19:07:55] 2025-06-04 23:07:40,161 | INFO     | intersect: 9875335967.862436
[2025-06-04 19:07:55] 2025-06-04 23:07:40,161 | INFO     | chi2: 0.01072776052659038
[2025-06-04 19:07:55] 2025-06-04 23:07:40,161 | INFO     | -- intersect: 9875335967.862436
[2025-06-04 19:07:55] 2025-06-04 23:07:40,161 | INFO     | current memory leak: -5.64 B/s (using 109 data points, chi2=0.01)
[2025-06-04 19:07:55] 2025-06-04 23:07:40,162 | INFO     | ..............................
[2025-06-04 19:07:55] 2025-06-04 23:07:40,162 | INFO     | . Timing measurements:
[2025-06-04 19:07:55] 2025-06-04 23:07:40,162 | INFO     | . get job = 0 s
[2025-06-04 19:07:55] 2025-06-04 23:07:40,162 | INFO     | . initial setup = 2 s
[2025-06-04 19:07:55] 2025-06-04 23:07:40,162 | INFO     | . payload setup = 4 s
[2025-06-04 19:07:55] 2025-06-04 23:07:40,162 | INFO     | . stage-in = 0 s
[2025-06-04 19:07:55] 2025-06-04 23:07:40,162 | INFO     | . payload execution = 8487 s
[2025-06-04 19:07:55] 2025-06-04 23:07:40,162 | INFO     | . stage-out = 1 s
[2025-06-04 19:07:55] 2025-06-04 23:07:40,162 | INFO     | . log creation = 0 s
[2025-06-04 19:07:55] 2025-06-04 23:07:40,162 | INFO     | ..............................
[2025-06-04 19:07:55] 2025-06-04 23:07:40,258 | INFO     | 
[2025-06-04 19:07:55] 2025-06-04 23:07:40,258 | INFO     | job summary report
[2025-06-04 19:07:55] 2025-06-04 23:07:40,258 | INFO     | --------------------------------------------------
[2025-06-04 19:07:55] 2025-06-04 23:07:40,258 | INFO     | PanDA job id: 6667883275
[2025-06-04 19:07:55] 2025-06-04 23:07:40,258 | INFO     | task id: 44871837
[2025-06-04 19:07:55] 2025-06-04 23:07:40,258 | INFO     | errors: (none)
[2025-06-04 19:07:55] 2025-06-04 23:07:40,258 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:07:55] 2025-06-04 23:07:40,258 | INFO     | pilot state: finished 
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | transexitcode: 0
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | exeerrorcode: 0
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | exeerrordiag: 
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | exitcode: 0
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | exitmsg: OK
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | cpuconsumptiontime: 42505 s
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | nevents: 400
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | neventsw: 0
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | pid: 5738
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | pgrp: 5738
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | corecount: 8
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | event service: False
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | sizes: {0: 2397392, 2: 2397598, 10: 2397626, 8496: 2425481, 8497: 2434422, 8499: 2434478, 8517: 2434776}
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | --------------------------------------------------
[2025-06-04 19:07:55] 2025-06-04 23:07:40,259 | INFO     | 
[2025-06-04 19:07:55] 2025-06-04 23:07:40,260 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 19:07:55] 2025-06-04 23:07:40,299 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,299 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,299 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,299 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,299 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,299 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,299 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,299 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,299 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,299 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,300 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,300 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,300 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,300 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,300 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,300 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,300 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,300 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:07:55] 2025-06-04 23:07:40,300 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,300 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:07:55] 2025-06-04 23:07:40,300 | INFO     | job 6667883275 has completed (purged errors)
[2025-06-04 19:07:55] 2025-06-04 23:07:40,300 | INFO     | overall cleanup function is called
[2025-06-04 19:07:55] 2025-06-04 23:07:41,308 | INFO     | --- collectZombieJob: --- 10, [5738]
[2025-06-04 19:07:55] 2025-06-04 23:07:41,308 | INFO     | zombie collector waiting for pid 5738
[2025-06-04 19:07:55] 2025-06-04 23:07:41,308 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:07:55] 2025-06-04 23:07:41,308 | INFO     | collected zombie processes
[2025-06-04 19:07:55] 2025-06-04 23:07:41,308 | INFO     | will attempt to kill all subprocesses of pid=5738
[2025-06-04 19:07:55] 2025-06-04 23:07:41,471 | INFO     | process IDs to be killed: [5738] (in reverse order)
[2025-06-04 19:07:55] 2025-06-04 23:07:41,653 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:07:55] 2025-06-04 23:07:41,653 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:07:55] 2025-06-04 23:07:41,660 | INFO     | did not find any defunct processes belonging to 5738
[2025-06-04 19:07:55] 2025-06-04 23:07:41,666 | INFO     | did not find any defunct processes belonging to 5738
[2025-06-04 19:07:55] 2025-06-04 23:07:41,666 | INFO     | ready for new job
[2025-06-04 19:07:55] 2025-06-04 23:07:41,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:07:55] 2025-06-04 23:07:41,668 | INFO     | **************************************
[2025-06-04 19:07:55] 2025-06-04 23:07:41,668 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:07:55] 2025-06-04 23:07:41,668 | INFO     | **************************************
[2025-06-04 19:07:55] 2025-06-04 23:07:41,668 | INFO     | 
[2025-06-04 19:07:55] 2025-06-04 23:07:41,671 | INFO     | architecture information:
[2025-06-04 19:07:55] 2025-06-04 23:07:41,672 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:07:55] 2025-06-04 23:07:41,687 | INFO     | cat /etc/os-release:
[2025-06-04 19:07:55] NAME="CentOS Linux"
[2025-06-04 19:07:55] VERSION="7 (Core)"
[2025-06-04 19:07:55] ID="centos"
[2025-06-04 19:07:55] ID_LIKE="rhel fedora"
[2025-06-04 19:07:55] VERSION_ID="7"
[2025-06-04 19:07:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:07:55] ANSI_COLOR="0;31"
[2025-06-04 19:07:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:07:55] HOME_URL="https://www.centos.org/"
[2025-06-04 19:07:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:07:55] 
[2025-06-04 19:07:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:07:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:07:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:07:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:07:55] 
[2025-06-04 19:07:55] 2025-06-04 23:07:41,687 | INFO     | **************************************
[2025-06-04 19:07:55] 2025-06-04 23:07:42,190 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 19:07:55] 2025-06-04 23:07:42,233 | INFO     | sufficient remaining disk space (76165414912 B)
[2025-06-04 19:07:55] 2025-06-04 23:07:42,233 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:07:55] 2025-06-04 23:07:42,233 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:07:55] 2025-06-04 23:07:42,233 | INFO     | update_server=False
[2025-06-04 19:07:55] 2025-06-04 23:07:42,233 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:07:55] 2025-06-04 23:07:42,233 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:07:55] 2025-06-04 23:07:42,234 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:07:55] 2025-06-04 23:07:42,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:07:55] 2025-06-04 23:07:42,234 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:07:55] 2025-06-04 23:07:42,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:07:55] 2025-06-04 23:07:42,284 | INFO     | all job control threads have been joined
[2025-06-04 19:07:55] 2025-06-04 23:07:42,305 | INFO     | all data control threads have been joined
[2025-06-04 19:07:55] 2025-06-04 23:07:42,672 | INFO     | all payload control threads have been joined
[2025-06-04 19:07:55] 2025-06-04 23:07:42,693 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:07:55] 2025-06-04 23:07:42,694 | INFO     | aborting loop
[2025-06-04 19:07:55] 2025-06-04 23:07:43,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:07:55] 2025-06-04 23:07:43,234 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:43,239 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:43,287 | INFO     | [job] control thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:43,307 | INFO     | [data] control thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:43,527 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:43,677 | INFO     | [payload] control thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:43,699 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:43,789 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:43,854 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:43,871 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:44,103 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:44,459 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:44,593 | INFO     | [job] validate thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:44,669 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:45,231 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:45,666 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:07:55] 2025-06-04 23:07:49,671 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:07:55] 2025-06-04 23:07:50,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139960276731712)>', '<ExcThread(monitor, started 139959612724992)>']
[2025-06-04 19:07:55] 2025-06-04 23:07:51,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:07:55] 2025-06-04 23:07:51,277 | INFO     | [monitor] control thread has ended
[2025-06-04 19:07:55] 2025-06-04 23:07:55,404 | INFO     | all workflow threads have been joined
[2025-06-04 19:07:55] 2025-06-04 23:07:55,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:07:55] 2025-06-04 23:07:55,405 | INFO     | traces error code: 0
[2025-06-04 19:07:55] 2025-06-04 23:07:55,405 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:07:55] 2025-06-04 23:07:55,516 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:07:55] 2025-06-04 23:07:55,518 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:07:55] 2025-06-04 23:07:55,520 [wrapper] pilotpid: 49652
[2025-06-04 19:07:55] 2025-06-04 23:07:55,522 [wrapper] Pilot exit status: 0
[2025-06-04 19:07:55] 2025-06-04 23:07:55,621 [wrapper] pandaids: 6667883275
[2025-06-04 19:07:55] 2025-06-04 23:07:55,686 [wrapper] cleanup supervisor_pilot 30693 49653
[2025-06-04 19:07:55] 2025-06-04 23:07:55,689 [wrapper] Test setup, not cleaning
[2025-06-04 19:07:55] 2025-06-04 23:07:55,691 [wrapper] apfmon messages muted
[2025-06-04 19:07:55] 2025-06-04 23:07:55,692 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:07:55] 2025-06-04 23:07:55,694 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:07:55]  *** Error codes and diagnostics ***
[2025-06-04 19:07:55]     "exeErrorCode": 0,
[2025-06-04 19:07:55]     "exeErrorDiag": "",
[2025-06-04 19:07:55]     "pilotErrorCode": 0,
[2025-06-04 19:07:55]     "pilotErrorDiag": "",
[2025-06-04 19:07:55]  *** Listing of results directory ***
[2025-06-04 19:07:55] total 414376
[2025-06-04 19:07:55] -rw-r--r-- 1 boincer umatlas    495897 May 27 20:38 pilot3.tar.gz
[2025-06-04 19:07:55] -rw-r--r-- 1 boincer umatlas      5111 May 27 21:20 queuedata.json
[2025-06-04 19:07:55] -rwx------ 1 boincer umatlas     37140 May 27 21:21 runpilot2-wrapper.sh
[2025-06-04 19:07:55] -rw-r--r-- 1 boincer umatlas       100 Jun  4 16:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:07:55] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 16:45 run_atlas
[2025-06-04 19:07:55] -rw-r--r-- 1 boincer umatlas       105 Jun  4 16:45 job.xml
[2025-06-04 19:07:55] -rw-r--r-- 2 boincer umatlas 223665807 Jun  4 16:45 EVNT.44871834._002995.pool.root.1
[2025-06-04 19:07:55] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 16:45 start_atlas.sh
[2025-06-04 19:07:55] drwxrwx--x 2 boincer umatlas      4096 Jun  4 16:45 shared
[2025-06-04 19:07:55] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 16:45 input.tar.gz
[2025-06-04 19:07:55] -rw-r--r-- 1 boincer umatlas         0 Jun  4 16:45 boinc_lockfile
[2025-06-04 19:07:55] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 16:45 pandaJob.out
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas    987032 Jun  4 16:45 agis_schedconf.cvmfs.json
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas   1598969 Jun  4 16:45 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:07:55] drwx------ 4 boincer umatlas      4096 Jun  4 16:45 pilot3
[2025-06-04 19:07:55] -rw-r--r-- 1 boincer umatlas      6337 Jun  4 19:03 init_data.xml
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas 194544918 Jun  4 19:06 HITS.44871837._076580.pool.root.1
[2025-06-04 19:07:55] -rw-r--r-- 1 boincer umatlas       529 Jun  4 19:06 boinc_task_state.xml
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas        95 Jun  4 19:07 pilot_heartbeat.json
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas      1071 Jun  4 19:07 memory_monitor_summary.json
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas    355630 Jun  4 19:07 log.44871837._076580.job.log.tgz.1
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas      7741 Jun  4 19:07 heartbeat.json
[2025-06-04 19:07:55] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 19:07 boinc_mmap_file
[2025-06-04 19:07:55] -rw-r--r-- 1 boincer umatlas        27 Jun  4 19:07 wrapper_checkpoint.txt
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas      4476 Jun  4 19:07 pilotlog.txt
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas    786724 Jun  4 19:07 log.44871837._076580.job.log.1
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas       357 Jun  4 19:07 output.list
[2025-06-04 19:07:55] -rw-r--r-- 1 boincer umatlas       620 Jun  4 19:07 runtime_log
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas   1157120 Jun  4 19:07 result.tar.gz
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas       657 Jun  4 19:07 tEMNDmRfKe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5taKDmIENKkn.diag
[2025-06-04 19:07:55] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 19:07 runtime_log.err
[2025-06-04 19:07:55] -rw-r--r-- 1 boincer umatlas     20800 Jun  4 19:07 stderr.txt
[2025-06-04 19:07:55] HITS file was successfully produced:
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas 194544918 Jun  4 19:06 shared/HITS.pool.root.1
[2025-06-04 19:07:55]  *** Contents of shared directory: ***
[2025-06-04 19:07:55] total 410064
[2025-06-04 19:07:55] -rw-r--r-- 2 boincer umatlas 223665807 Jun  4 16:45 ATLAS.root_0
[2025-06-04 19:07:55] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 16:45 start_atlas.sh
[2025-06-04 19:07:55] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 16:45 input.tar.gz
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas 194544918 Jun  4 19:06 HITS.pool.root.1
[2025-06-04 19:07:55] -rw------- 1 boincer umatlas   1157120 Jun  4 19:07 result.tar.gz
19:07:57 (42790): run_atlas exited; CPU time 42189.173160
19:07:57 (42790): called boinc_finish(0)

</stderr_txt>
]]>

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